Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0007075

Physical Location & Seq

Genomic Coordinates Reverse (-)

18051557 .. 18054721

Gene Structure 3165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g21860.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGATTTCGAATCGTCTAAGATATTCAACAACCGCCAACTGTTTCACAACCCCAAAACCTCACCTTCAACCACCCAAAACCCTAAACCCACAATCTATACTTGACATAATCAAGCAATGTCGAACAGTAACAGAGCTAGAACAAATCTGCGCCTCAATGATCAAGACCAACACAATCCAAGACTCTTTCTTCACCAACCAACTCATCACCGCCTCTTCCTCCCTTTCCCGCCTAAACCACGCAGCTCTCGCCTTTTCCCACATCCAAAACCCAAACGCCTTCGTCTACAACGCTATGATCAAAGCCTCTGTTCACTGCGGACACCCATTTCAGGGTCTACTCTGTTTCATCAATATGTTGAGAAACAGAGTCTTCCCTACTAGCTATACTTACCCGTCTCTGATCAAGGCCTGTGCCTCGGTTTCCGTGATGGGTTTTGGAGAGGGTGTCCATGGACGTGTCTGGAAAACTGGGTTTGATTCACATGTGTATGTTCAGACTGCTCTGATTGATTTGTACTCGAAGCTGGGACGTGTTGGTGATGCCCGAAAGGTGTTTGATGAAATGCCTGACAGAGATGGGTTTGCGTGGACTACGATGGTTGCTTCTCATGTTCGTGTTGGGGATATGAGCTCGGCGAGGGTGTTGTTTGATGAGATGTTAGAGAGGTGTATAGCGAATGCGGCTACTTGGAATACTATGATTGATGGATACGCGAGGCTCGGTGATGTTGAGTCTGCAGGGATGTTGTTTGATCAAATGCCAGCCAGGGATTTGATCTCGTGGACAGCAATGATTAATTGTTATTGTCAGAACAAGAGATTCGGAGAAGCGTTGGCTGTGTTTGATGAGATGAGGATCAATGGGGTTAGTCCTGATGCAGTGACCATGTCAACTGTTGTTTCGGCTTGTGCTCATCTGGGGGCTTTAGACTTGGGGAAAGAGATACATTATTATGTAATGCGGAATGGGTTTGATCTTGATGTTTATATTGGGTCTGCGTTGATTGATATGTATGCGAAATGTGGTGCATTGGACAGAGCTCTTGTGGTTTTCTTTAACTTGCGGGAGAAGAATCTGTTCTGTTGGAATTCAGTTATTGAAGGGCTTGCGGCTCATGGAGATGCCGAAAAAGCACTAGCAATGTTTAGCAAGATGGCCAGGGAGAAGATCAAGCCAAATGGGGTTACTTTTGTAAGTGTTTTAAGTGCCTGCACCCATGCCGGGCTAGTAGAAGAAGGGCGTAGGAGATTTTCAAGCATGACCCAAGATTATTCCATTTCACCTGGAGCTGAACATTATGGATGCATGGTGGATCTATTAAGCAGAGCTGGCTTGCTTGACGATGCATTAGAGTTGATAAGAAGCATGAAACTAAAACCTAACTCTGTTATCTGGGGTGCCTTGTTGGGTGGATGCAAGCTTCATAAAAATCTGGAGATTGCAAAAGTTTCGGTCAATGAATTGATGGTGTTGGAGCCAAACAATAGTGGGCATTACAACCTTATAGTTAACATGTACGCCGACGTCAATCGCTGGGGAGAAGTTGCAGATGTACGAGCAATTATGAAGCAACTGGGAGTACAAAAGACATCTCCTGGGTCCAGCTGGATTGAAATCGAAAGGAAAATCCATACATTCGCAGCATCTGACAAGTCTCATGCAGCTTCTGGTGAAATTCACTCGTTTCTTGCAGAACTATACGGGCAGATGAAGCTTGATGTATATCTTCCTGAACTTGCTTCTGCCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003700 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006355 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0019538 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034641 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:0099402 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 bHLH-MYC_N

Protein Analysis

585

Amino Acids

64.66

Weight (kDa)

7.0

Isoelectric Point (pI)

37.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	91 - 139	5.2e-08	PPR repeat family
PPR_1	PF12854	224 - 254	2.1e-06	PPR repeat
PPR_2	PF13041	227 - 257	1.3e-06	PPR repeat family
PPR	PF01535	230 - 257	1.4e-07	PPR repeat
PPR_2	PF13041	258 - 306	3.1e-14	PPR repeat family
PPR_1	PF12854	258 - 286	1.1e-06	PPR repeat
PPR	PF01535	260 - 290	4.1e-09	PPR repeat
PPR_2	PF13041	359 - 406	1.5e-10	PPR repeat family
E_motif	PF20431	476 - 539	3.3e-16	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007075)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06143
fragaria_vesca	FvH4_2g21860
malus_domestica	MD05G1200200.v1.1 MD10G1186800.v1.1
prunus_persica	Prupe.8G226200_v2.0.a1
pyrus_communis	pycom05g18700
rosa_chinensis	RchiOBHm_Chr6g0288721 RchiOBHm_Chr6g0288731
rosa_laevigata	RLG00000012369 RLG00000012373 RLG00000012374 RLG00000012381
rosa_multiflora	Rmu_sc0004861.1_g000010
rosa_roxburghii	Rroxscaffold_7G00179910
rosa_rugosa	Rorug06G0197800 Rorug06G0197900 Rorug06G0198000
rosa_samantha	Rh6BG314900 Rh6BG315000 Rh6CG322200 Rh6CG322300 Rh6DG308000 Rh6DG308100
rosa_wichuraiana	Rw6G026720 Rw6G026730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1530
AccB1I	GGYRCC	1 cut(s)	1400
AccI	GTMKAC	2 cut(s)	285, 337
AccII	CGCG	1 cut(s)	716
AciI	CCGC	8 cut(s)	33, 210, 229, 318, 683, 964, 1066, 1112
AclWI	GGATC	2 cut(s)	866, 1323
AcoI	YGGCCR	1 cut(s)	1158
AcsI	RAATTY	2 cut(s)	1090, 1677
AcyI	GRCGYC	1 cut(s)	1527
AfaI	GTAC	4 cut(s)	518, 1520, 1557, 1584
AfiI	CCNNNNNNNGG	3 cut(s)	331, 332, 1224
AflIII	ACRYGT	4 cut(s)	457, 484, 532, 1515
AgsI	TTSAA	5 cut(s)	27, 68, 1103, 1257, 1616
AjiI	CACGTC	2 cut(s)	458, 533
AjnI	CCWGG	4 cut(s)	767, 1160, 1285, 1597
Alw21I	GWGCWC	3 cut(s)	635, 916, 1045
Alw26I	GTCTC	2 cut(s)	402, 1662
AlwI	GGATC	2 cut(s)	866, 1323
AlwNI	CAGNNNCTG	2 cut(s)	1649, 1670
AoxI	GGCC	2 cut(s)	408, 1158
ApeKI	GCWGC	3 cut(s)	242, 1643, 1664
ApoI	RAATTY	2 cut(s)	1090, 1677
AseI	ATTAAT	1 cut(s)	798
Asp700I	GAANNNNTTC	1 cut(s)	1079
AspLEI	GCGC	1 cut(s)	152
AspS9I	GGNCC	1 cut(s)	1602
AsuC2I	CCSGG	1 cut(s)	1225
AsuHPI	GGTGA	7 cut(s)	53, 184, 199, 551, 737, 1275, 1685
AsuII	TTCGAA	1 cut(s)	8
AvaII	GGWCC	1 cut(s)	1602
BalI	TGGCCA	1 cut(s)	1160
BanI	GGYRCC	1 cut(s)	1400
BanII	GRGCYC	2 cut(s)	635, 1045
BauI	CACGAG	1 cut(s)	781
BbsI	GAAGAC	1 cut(s)	364
Bbv12I	GWGCWC	3 cut(s)	635, 916, 1045
BbvI	GCAGC	3 cut(s)	254, 1655, 1676
BccI	CCATC	6 cut(s)	424, 572, 592, 701, 1150, 1462
BcgI	CGANNNNNNTGC	2 cut(s)	1434, 1468
BciT130I	CCWGG	4 cut(s)	769, 1162, 1287, 1599
BciVI	GTATCC	1 cut(s)	704
BclI	TGATCA	4 cut(s)	159, 297, 402, 754
BcnI	CCSGG	1 cut(s)	1225
BcoDI	GTCTC	2 cut(s)	402, 1662
BfaI	CTAG	4 cut(s)	137, 381, 1139, 1229
BfmI	CTRYAG	1 cut(s)	738
BfuI	GTATCC	1 cut(s)	704
BisI	GCNGC	5 cut(s)	243, 684, 1113, 1644, 1665
BlsI	GCNGC	5 cut(s)	244, 685, 1114, 1645, 1666
Bme1390I	CCNGG	5 cut(s)	769, 1162, 1225, 1287, 1599
Bme18I	GGWCC	1 cut(s)	1602
BmgBI	CACGTC	2 cut(s)	458, 533
BmgT120I	GGNCC	1 cut(s)	1602
BmiI	GGNNCC	3 cut(s)	1402, 1479, 1603
BmrFI	CCNGG	5 cut(s)	769, 1162, 1225, 1287, 1599
BmrI	ACTGGG	2 cut(s)	480, 1586
BmsI	GCATC	7 cut(s)	532, 868, 1114, 1295, 1336, 1406, 1655
BmuI	ACTGGG	2 cut(s)	480, 1586
BpiI	GAAGAC	1 cut(s)	364
BpmI	CTGGAG	2 cut(s)	1308, 1457
Bpu14I	TTCGAA	1 cut(s)	8
BpuMI	CCSGG	1 cut(s)	1225
BsaBI	GATNNNNATC	3 cut(s)	857, 1616, 1725
BsaHI	GRCGYC	1 cut(s)	1527
BsaJI	CCNNGG	5 cut(s)	417, 451, 768, 1161, 1598
BsaXI	ACNNNNNCTCC	2 cut(s)	432, 462
Bsc4I	CCNNNNNNNGG	3 cut(s)	331, 332, 1224
Bse1I	ACTGG	2 cut(s)	475, 1581
Bse3DI	GCAATG	3 cut(s)	122, 798, 1149
Bse8I	GATNNNNATC	3 cut(s)	857, 1616, 1725
BseBI	CCWGG	4 cut(s)	769, 1162, 1287, 1599
BseDI	CCNNGG	5 cut(s)	417, 451, 768, 1161, 1598
BseGI	GGATG	4 cut(s)	261, 750, 1310, 1421
BseJI	GATNNNNATC	3 cut(s)	857, 1616, 1725
BseLI	CCNNNNNNNGG	3 cut(s)	331, 332, 1224
BseMI	GCAATG	3 cut(s)	122, 798, 1149
BseNI	ACTGG	2 cut(s)	475, 1581
BseXI	GCAGC	3 cut(s)	254, 1655, 1676
BseYI	CCCAGC	2 cut(s)	526, 1536
BsgI	GTGCAG	1 cut(s)	1198
Bsh1236I	CGCG	1 cut(s)	716
BshFI	GGCC	2 cut(s)	410, 1160
BshNI	GGYRCC	1 cut(s)	1400
BsiHKAI	GWGCWC	3 cut(s)	635, 916, 1045
BsiSI	CCGG	1 cut(s)	1224
BslFI	GGGAC	1 cut(s)	543
BslI	CCNNNNNNNGG	3 cut(s)	331, 332, 1224
BsmAI	GTCTC	2 cut(s)	402, 1662
BsmBI	CGTCTC	1 cut(s)	402
BsmFI	GGGAC	1 cut(s)	543
BsmI	GAATGC	1 cut(s)	685
BsnI	GGCC	2 cut(s)	410, 1160
Bsp119I	TTCGAA	1 cut(s)	8
Bsp1286I	GDGCHC	3 cut(s)	635, 916, 1045
Bsp143I	GATC	9 cut(s)	159, 297, 402, 754, 777, 858, 976, 1170, 1315
Bsp19I	CCATGG	1 cut(s)	451
BspACI	CCGC	8 cut(s)	33, 210, 229, 318, 683, 964, 1066, 1112
BspANI	GGCC	2 cut(s)	410, 1160
BspFNI	CGCG	1 cut(s)	716
BspLI	GGNNCC	3 cut(s)	1402, 1479, 1603
BspMAI	CTGCAG	1 cut(s)	742
BspPI	GGATC	2 cut(s)	866, 1323
BspT104I	TTCGAA	1 cut(s)	8
BspT107I	GGYRCC	1 cut(s)	1400
BsrDI	GCAATG	3 cut(s)	122, 798, 1149
BsrI	ACTGG	2 cut(s)	475, 1581
BssECI	CCNNGG	5 cut(s)	417, 451, 768, 1161, 1598
BssMI	GATC	9 cut(s)	159, 297, 402, 754, 777, 858, 976, 1170, 1315
BssNI	GRCGYC	1 cut(s)	1527
BssSI	CACGAG	1 cut(s)	781
BssT1I	CCWWGG	1 cut(s)	451
Bst2BI	CACGAG	1 cut(s)	781
Bst2UI	CCWGG	4 cut(s)	769, 1162, 1287, 1599
Bst4CI	ACNGT	3 cut(s)	41, 127, 898
Bst6I	CTCTTC	1 cut(s)	220
BstACI	GRCGYC	1 cut(s)	1527
BstBI	TTCGAA	1 cut(s)	8
BstC8I	GCNNGC	6 cut(s)	765, 1110, 1213, 1333, 1337, 1421
BstDEI	CTNAG	1 cut(s)	17
BstDSI	CCRYGG	1 cut(s)	451
BstF5I	GGATG	4 cut(s)	261, 750, 1310, 1421
BstFNI	CGCG	1 cut(s)	716
BstHHI	GCGC	1 cut(s)	152
BstKTI	GATC	9 cut(s)	162, 300, 405, 757, 780, 861, 979, 1173, 1318
BstMAI	GTCTC	2 cut(s)	402, 1662
BstMBI	GATC	9 cut(s)	159, 297, 402, 754, 777, 858, 976, 1170, 1315
BstMWI	GCNNNNNNNGC	5 cut(s)	248, 683, 1133, 1332, 1714
BstNI	CCWGG	4 cut(s)	769, 1162, 1287, 1599
BstNSI	RCATGY	2 cut(s)	488, 1519
BstSCI	CCNGG	5 cut(s)	767, 1160, 1223, 1285, 1597
BstSFI	CTRYAG	1 cut(s)	738
BstUI	CGCG	1 cut(s)	716
BstV1I	GCAGC	3 cut(s)	254, 1655, 1676
BstV2I	GAAGAC	1 cut(s)	364
BstX2I	RGATCY	1 cut(s)	1315
BstYI	RGATCY	1 cut(s)	1315
BsuI	GTATCC	1 cut(s)	704
BsuRI	GGCC	2 cut(s)	410, 1160
BtgI	CCRYGG	1 cut(s)	451
BtrI	CACGTC	2 cut(s)	458, 533
BtsCI	GGATG	4 cut(s)	261, 750, 1310, 1421
BtsI	GCAGTG	2 cut(s)	313, 888
BtsIMutI	CAGTG	2 cut(s)	313, 888
Cac8I	GCNNGC	6 cut(s)	765, 1110, 1213, 1333, 1337, 1421
CaiI	CAGNNNCTG	2 cut(s)	1649, 1670
CfoI	GCGC	1 cut(s)	152
Cfr13I	GGNCC	1 cut(s)	1602
Csp6I	GTAC	4 cut(s)	517, 1519, 1556, 1583
CviQI	GTAC	4 cut(s)	517, 1519, 1556, 1583
DdeI	CTNAG	1 cut(s)	17
DpnI	GATC	9 cut(s)	161, 299, 404, 756, 779, 860, 978, 1172, 1317
DpnII	GATC	9 cut(s)	159, 297, 402, 754, 777, 858, 976, 1170, 1315
EaeI	YGGCCR	1 cut(s)	1158
Eam1104I	CTCTTC	1 cut(s)	220
EarI	CTCTTC	1 cut(s)	220
Ecl136II	GAGCTC	2 cut(s)	633, 1043
Eco130I	CCWWGG	1 cut(s)	451
Eco147I	AGGCCT	1 cut(s)	410
Eco24I	GRGCYC	2 cut(s)	635, 1045
Eco47I	GGWCC	1 cut(s)	1602
Eco53kI	GAGCTC	2 cut(s)	633, 1043
EcoICRI	GAGCTC	2 cut(s)	633, 1043
EcoRI	GAATTC	1 cut(s)	1090
EcoRII	CCWGG	4 cut(s)	767, 1160, 1285, 1597
EcoT14I	CCWWGG	1 cut(s)	451
EcoT22I	ATGCAT	2 cut(s)	1310, 1351
EcoT38I	GRGCYC	2 cut(s)	635, 1045
ErhI	CCWWGG	1 cut(s)	451
Esp3I	CGTCTC	1 cut(s)	402
FaqI	GGGAC	1 cut(s)	543
FauI	CCCGC	2 cut(s)	236, 1059
FbaI	TGATCA	4 cut(s)	159, 297, 402, 754
FblI	GTMKAC	2 cut(s)	285, 337
Fnu4HI	GCNGC	5 cut(s)	243, 684, 1113, 1644, 1665
FokI	GGATG	4 cut(s)	248, 757, 1317, 1428
FriOI	GRGCYC	2 cut(s)	635, 1045
Fsp4HI	GCNGC	5 cut(s)	243, 684, 1113, 1644, 1665
FspBI	CTAG	4 cut(s)	137, 381, 1139, 1229
GlaI	GCGC	1 cut(s)	151
GluI	GCNGC	5 cut(s)	243, 684, 1113, 1644, 1665
GsaI	CCCAGC	2 cut(s)	530, 1540
GsuI	CTGGAG	2 cut(s)	1308, 1457
HaeIII	GGCC	2 cut(s)	410, 1160
HapII	CCGG	1 cut(s)	1224
HhaI	GCGC	1 cut(s)	152
Hin1I	GRCGYC	1 cut(s)	1527
Hin6I	GCGC	1 cut(s)	150
HinP1I	GCGC	1 cut(s)	150
HincII	GTYRAC	2 cut(s)	894, 1513
HindII	GTYRAC	2 cut(s)	894, 1513
HindIII	AAGCTT	2 cut(s)	1421, 1715
HinfI	GANTC	7 cut(s)	10, 182, 369, 479, 734, 822, 1075
HpaI	GTTAAC	1 cut(s)	1513
HpaII	CCGG	1 cut(s)	1224
HphI	GGTGA	7 cut(s)	53, 184, 199, 551, 737, 1275, 1685
Hpy166II	GTNNAC	7 cut(s)	286, 313, 338, 591, 786, 894, 1513
Hpy188I	TCNGA	6 cut(s)	402, 498, 507, 813, 827, 1651
Hpy188III	TCNNGA	6 cut(s)	163, 463, 875, 980, 1436, 1733
Hpy8I	GTNNAC	7 cut(s)	286, 313, 338, 591, 786, 894, 1513
Hpy99I	CGWCG	1 cut(s)	1529
HpyAV	CCTTC	4 cut(s)	74, 289, 1097, 1232
HpyCH4III	ACNGT	3 cut(s)	41, 127, 898
HpyCH4IV	ACGT	3 cut(s)	457, 532, 1527
HpyF10VI	GCNNNNNNNGC	5 cut(s)	248, 683, 1133, 1332, 1714
HpyF3I	CTNAG	1 cut(s)	17
HpySE526I	ACGT	3 cut(s)	457, 532, 1527
Hsp92I	GRCGYC	1 cut(s)	1527
HspAI	GCGC	1 cut(s)	150
Ksp22I	TGATCA	4 cut(s)	159, 297, 402, 754
KspAI	GTTAAC	1 cut(s)	1513
Kzo9I	GATC	9 cut(s)	159, 297, 402, 754, 777, 858, 976, 1170, 1315
LmnI	GCTCC	2 cut(s)	1289, 1477
Lsp1109I	GCAGC	3 cut(s)	254, 1655, 1676
LweI	GCATC	7 cut(s)	532, 868, 1114, 1295, 1336, 1406, 1655
MaeI	CTAG	4 cut(s)	137, 381, 1139, 1229
MaeII	ACGT	3 cut(s)	457, 532, 1527
MaeIII	GTNAC	3 cut(s)	127, 883, 1186
MalI	GATC	9 cut(s)	161, 299, 404, 756, 779, 860, 978, 1172, 1317
MboI	GATC	9 cut(s)	159, 297, 402, 754, 777, 858, 976, 1170, 1315
MboII	GAAGA	7 cut(s)	181, 207, 364, 1084, 1180, 1247, 1721
MflI	RGATCY	1 cut(s)	1315
MhlI	GDGCHC	3 cut(s)	635, 916, 1045
MlsI	TGGCCA	1 cut(s)	1160
MluCI	AATT	5 cut(s)	799, 1090, 1463, 1563, 1677
MluNI	TGGCCA	1 cut(s)	1160
MlyI	GAGTC	3 cut(s)	176, 378, 743
MmeI	TCCRAC	2 cut(s)	1067, 1455
Mox20I	TGGCCA	1 cut(s)	1160
Mph1103I	ATGCAT	2 cut(s)	1310, 1351
MroXI	GAANNNNTTC	1 cut(s)	1079
MscI	TGGCCA	1 cut(s)	1160
MseI	TTAA	5 cut(s)	798, 1059, 1205, 1322, 1512
MslI	CAYNNNNRTG	6 cut(s)	353, 456, 489, 615, 954, 1122
Msp20I	TGGCCA	1 cut(s)	1160
MspA1I	CMGCKG	1 cut(s)	1608
MspI	CCGG	1 cut(s)	1224
MspR9I	CCNGG	5 cut(s)	769, 1162, 1225, 1287, 1599
Mva1269I	GAATGC	1 cut(s)	685
MvaI	CCWGG	4 cut(s)	769, 1162, 1287, 1599
MvnI	CGCG	1 cut(s)	716
MwoI	GCNNNNNNNGC	5 cut(s)	248, 683, 1133, 1332, 1714
NciI	CCSGG	1 cut(s)	1225
NcoI	CCATGG	1 cut(s)	451
NdeII	GATC	9 cut(s)	159, 297, 402, 754, 777, 858, 976, 1170, 1315
NlaIV	GGNNCC	3 cut(s)	1402, 1479, 1603
NmeAIII	GCCGAG	1 cut(s)	614
NmuCI	GTSAC	1 cut(s)	883
NsiI	ATGCAT	2 cut(s)	1310, 1351
NspI	RCATGY	2 cut(s)	488, 1519
NspV	TTCGAA	1 cut(s)	8
PceI	AGGCCT	1 cut(s)	410
PciI	ACATGT	2 cut(s)	484, 1515
PctI	GAATGC	1 cut(s)	685
PdmI	GAANNNNTTC	1 cut(s)	1079
PfeI	GAWTC	4 cut(s)	10, 479, 822, 1075
PflFI	GACNNNGTC	1 cut(s)	889
PkrI	GCNGC	5 cut(s)	244, 685, 1114, 1645, 1666
PleI	GAGTC	3 cut(s)	176, 377, 742
PpsI	GAGTC	3 cut(s)	176, 377, 742
PscI	ACATGT	2 cut(s)	484, 1515
PshBI	ATTAAT	1 cut(s)	798
Psp124BI	GAGCTC	2 cut(s)	635, 1045
Psp6I	CCWGG	4 cut(s)	767, 1160, 1285, 1597
PspFI	CCCAGC	2 cut(s)	526, 1536
PspGI	CCWGG	4 cut(s)	767, 1160, 1285, 1597
PspN4I	GGNNCC	3 cut(s)	1402, 1479, 1603
PspPI	GGNCC	1 cut(s)	1602
PstI	CTGCAG	1 cut(s)	742
PstNI	CAGNNNCTG	2 cut(s)	1649, 1670
PsuI	RGATCY	1 cut(s)	1315
PsyI	GACNNNGTC	1 cut(s)	889
PvuII	CAGCTG	1 cut(s)	1608
RsaI	GTAC	4 cut(s)	518, 1520, 1557, 1584
RsaNI	GTAC	4 cut(s)	517, 1519, 1556, 1583
RseI	CAYNNNNRTG	6 cut(s)	353, 456, 489, 615, 954, 1122
SacI	GAGCTC	2 cut(s)	635, 1045
SaqAI	TTAA	5 cut(s)	798, 1059, 1205, 1322, 1512
SatI	GCNGC	5 cut(s)	243, 684, 1113, 1644, 1665
Sau3AI	GATC	9 cut(s)	159, 297, 402, 754, 777, 858, 976, 1170, 1315
Sau96I	GGNCC	1 cut(s)	1602
SchI	GAGTC	3 cut(s)	176, 378, 743
ScrFI	CCNGG	5 cut(s)	769, 1162, 1225, 1287, 1599
SduI	GDGCHC	3 cut(s)	635, 916, 1045
SfaNI	GCATC	7 cut(s)	532, 868, 1114, 1295, 1336, 1406, 1655
SfcI	CTRYAG	1 cut(s)	738
SfuI	TTCGAA	1 cut(s)	8
SinI	GGWCC	1 cut(s)	1602
SmiMI	CAYNNNNRTG	6 cut(s)	353, 456, 489, 615, 954, 1122
Sse9I	AATT	5 cut(s)	799, 1090, 1463, 1563, 1677
SseBI	AGGCCT	1 cut(s)	410
SsiI	CCGC	8 cut(s)	33, 210, 229, 318, 683, 964, 1066, 1112
SspMI	CTAG	4 cut(s)	137, 381, 1139, 1229
SstI	GAGCTC	2 cut(s)	635, 1045
StuI	AGGCCT	1 cut(s)	410
StyD4I	CCNGG	5 cut(s)	767, 1160, 1223, 1285, 1597
StyI	CCWWGG	1 cut(s)	451
TaaI	ACNGT	3 cut(s)	41, 127, 898
TaiI	ACGT	3 cut(s)	460, 535, 1530
TaqI	TCGA	4 cut(s)	8, 121, 521, 1620
TaqII	GACCGA	1 cut(s)	1444
TasI	AATT	5 cut(s)	799, 1090, 1463, 1563, 1677
TatI	WGTACW	2 cut(s)	516, 1582
TauI	GCSGC	2 cut(s)	686, 1115
TfiI	GAWTC	4 cut(s)	10, 479, 822, 1075
Tru1I	TTAA	5 cut(s)	798, 1059, 1205, 1322, 1512
Tru9I	TTAA	5 cut(s)	798, 1059, 1205, 1322, 1512
TscAI	CASTG	2 cut(s)	320, 888
TseFI	GTSAC	1 cut(s)	883
TseI	GCWGC	3 cut(s)	242, 1643, 1664
Tsp45I	GTSAC	1 cut(s)	883
TspDTI	ATGAA	7 cut(s)	337, 576, 1385, 1415, 1476, 1583, 1727
TspGWI	ACGGA	1 cut(s)	415
TspRI	CASTG	2 cut(s)	320, 888
Tth111I	GACNNNGTC	1 cut(s)	889
VpaK11BI	GGWCC	1 cut(s)	1602
VspI	ATTAAT	1 cut(s)	798
XapI	RAATTY	2 cut(s)	1090, 1677
XceI	RCATGY	2 cut(s)	488, 1519
XmiI	GTMKAC	2 cut(s)	285, 337
XmnI	GAANNNNTTC	1 cut(s)	1079
XspI	CTAG	4 cut(s)	137, 381, 1139, 1229
ZraI	GACGTC	1 cut(s)	1528
Zsp2I	ATGCAT	2 cut(s)	1310, 1351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.