Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007075

Physical Location & Seq

Genomic Coordinates Reverse (-)

51875664 .. 51877903

Gene Structure 2240 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25904

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGATTTTGAATCGCGTGAGATATTATTCAACTAACTGTTTCCCAACCCCAAAACCTCATCTTCAACCACCCAAAACCCTCTCGGAGAACCCACCTTCCATAGTTGATAGGATCAAGCAATGTCGTACTCAAACAGAGCTAGAACAGATATGTGCTTCAATGATGAAGACCAATACAATCCAAGACTCCTTCTTTACCAACCAACTCATCACCGCCTGTTCCTCTCTTTCCCGCCTAGACCACGCAGCTTTAGCCTTTTCCCACATCCAAAACCCAAACGTCTTCGTCTACAACGCAATGATCAAAGCCTTTGTTCACTGCGGACACCCATTTCAGGGTTTAGGCTGTTTCGTCAATATGTTGAGGAACGGGGTCTTCCCTACCAGCTATACTTTTCCGTCTTTGATCAAGGCTTGTGCCTCGGTTTCTGTGATGGGTTTTGGAGAAGCTGTACATGGCTGTGTTTGGAAAAGTGGGTTTGGTTCACATGTGTTTGTGCAGACTGCTTTGATTGATTTGTATTCGAAGCTGGGACGAATTGGTGAAGCGCAGAAGGTGTTCGATGAAATGCCTGAGAGGGATGGTTTTGCTTGGACTACAATGGTTTCTTCTCATGCTCGTGTAGGGGATATGAGGTCGGCGAGGGCATTGTTTGATGTGATGATGGAAAGGTATATAGCTAATTCGGCTACTTGGAATACTATGATCGACGGCTATGCGAGACTTGGTGATGTGGAGTCTGCAGAGTTGTTGTTTAATCAAATGCCAACCAGGGATTTGATCTCGTGGACAGCTATGATCAATTGTTATTCTCAGAATAAGAAATTCGGGGAAGCATTAACAGTGTTTAATGATATGAGGTTGAATGGGGTCAGTCCTGATGCGGTGACCATGTCGACTGTTATTTCGGCTTGTGCTCATCTCGGAGCTCTAGACTTGGGGAAAGGGATTCACTTTTACGCAACGCAGAATGGGTTTGATCTTGATGTTTATATTGGGTCTGCGTTGATTGATATGTATGCAAAATGTGGCACATTGGACAGGGCTCTTGTTGTTTTCTTTAACTTGAGGGATAAGAACTTGTTCTGTTGGAATTCAGTGATTGAAGGGCTTGCAGCTCATGGATATGCCAAAAAAGCACTAGCAATGTTTAGCAAGATGGAGAGAGAGAAGATAAAGCCAAATGGGATTACTTTTATAAGTGTTTTAAGTGCCTGCACTCATGCCGGGCTTGTTGAAGAAGGCCGTAGGAGATTCTTAAGCATGACCCAAGATTATTCCATCTCTCCTGGAGTTGAACACTATGGATGCATGGTGGATCTATTAAGCAGAGCTGGCTTGCTCGAAGATGCGTTAGAGTTGATAAGAAGCATGAAACTAAAACCAAACTCTGTTATCTGGGGTGCCTTGTTGGGTGGATGTAAACTTCATAGAAATCTGGAGATTGCTAAAGTTTCAGCCAATGAATTGATGGTATTGGAGCCAGAAAATAGTGGGCATTACAACCTTATAGTTAACATGTATGCCGAAGTCAATCGATGGGGAGAAGTTGCAGACGTACGAGCAATTATGAAGCAACTGGGAGTAGAAAAAACATCTCCTGGGTCCAGTTGGATTGAAATTGAAAGAAAAATCCATACGTTTTCAGCATCTGACAAATCTCATGCAGCTTCTGGTGAAATTTACTTGTTTCTTGCAGAATTATATGAGCAGCTGAAGCTTGATGTTTATCTTCCTGAACTTGGCTCTGACTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003700 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006355 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0019538 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034641 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:0099402 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 bHLH-MYC_N

Protein Analysis

585

Amino Acids

65.12

Weight (kDa)

6.63

Isoelectric Point (pI)

35.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	92 - 140	1.8e-10	PPR repeat family
PPR_2	PF13041	228 - 258	7e-07	PPR repeat family
PPR_1	PF12854	228 - 255	7.1e-07	PPR repeat
PPR	PF01535	231 - 258	2.9e-08	PPR repeat
PPR_2	PF13041	259 - 307	1.1e-13	PPR repeat family
PPR	PF01535	261 - 291	1.3e-07	PPR repeat
PPR_2	PF13041	360 - 407	6.8e-10	PPR repeat family
E_motif	PF20431	477 - 540	4.5e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007075)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06143
fragaria_vesca	FvH4_2g21860
malus_domestica	MD05G1200200.v1.1 MD10G1186800.v1.1
prunus_persica	Prupe.8G226200_v2.0.a1
pyrus_communis	pycom05g18700
rosa_chinensis	RchiOBHm_Chr6g0288721 RchiOBHm_Chr6g0288731
rosa_laevigata	RLG00000012369 RLG00000012373 RLG00000012374 RLG00000012381
rosa_multiflora	Rmu_sc0004861.1_g000010
rosa_roxburghii	Rroxscaffold_7G00179910
rosa_rugosa	Rorug06G0197800 Rorug06G0197900 Rorug06G0198000
rosa_samantha	Rh6BG314900 Rh6BG315000 Rh6CG322200 Rh6CG322300 Rh6DG308000 Rh6DG308100
rosa_wichuraiana	Rw6G026720 Rw6G026730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1199
AccB1I	GGYRCC	1 cut(s)	1403
AccI	GTMKAC	2 cut(s)	288, 896
AccII	CGCG	1 cut(s)	15
AciI	CCGC	4 cut(s)	213, 232, 321, 884
AclWI	GGATC	2 cut(s)	119, 1326
AcsI	RAATTY	3 cut(s)	824, 1093, 1680
AcuI	CTGAAG	1 cut(s)	1736
AfaI	GTAC	3 cut(s)	127, 453, 1560
AfiI	CCNNNNNNNGG	3 cut(s)	334, 335, 1742
AflII	CTTAAG	1 cut(s)	1258
AflIII	ACRYGT	2 cut(s)	487, 1518
AjnI	CCWGG	3 cut(s)	770, 1288, 1600
AloI	GAACNNNNNNTCC	2 cut(s)	80, 112
Alw21I	GWGCWC	2 cut(s)	919, 931
Alw26I	GTCTC	1 cut(s)	715
AlwI	GGATC	2 cut(s)	119, 1326
AlwNI	CAGNNNCTG	2 cut(s)	1652, 1673
AoxI	GGCC	1 cut(s)	1243
ApeKI	GCWGC	4 cut(s)	245, 1115, 1667, 1711
ApoI	RAATTY	3 cut(s)	824, 1093, 1680
ArsI	GACNNNNNNTTYG	2 cut(s)	889, 921
Asp700I	GAANNNNTTC	2 cut(s)	557, 1082
AspLEI	GCGC	1 cut(s)	550
AspS9I	GGNCC	1 cut(s)	1605
AsuC2I	CCSGG	1 cut(s)	1228
AsuHPI	GGTGA	5 cut(s)	202, 554, 740, 898, 1688
AsuII	TTCGAA	1 cut(s)	524
AvaII	GGWCC	1 cut(s)	1605
BanI	GGYRCC	1 cut(s)	1403
BanII	GRGCYC	2 cut(s)	931, 1048
BauI	CACGAG	2 cut(s)	618, 784
BbsI	GAAGAC	3 cut(s)	173, 274, 367
Bbv12I	GWGCWC	2 cut(s)	919, 931
BbvI	GCAGC	4 cut(s)	257, 1127, 1679, 1723
BccI	CCATC	7 cut(s)	427, 575, 658, 1153, 1289, 1465, 1533
BceAI	ACGGC	2 cut(s)	727, 1230
BcgI	CGANNNNNNTGC	2 cut(s)	698, 732
BciT130I	CCWGG	3 cut(s)	772, 1290, 1602
BclI	TGATCA	3 cut(s)	300, 405, 798
BcnI	CCSGG	1 cut(s)	1228
BcoDI	GTCTC	1 cut(s)	715
BfaI	CTAG	4 cut(s)	140, 236, 932, 1142
BfmI	CTRYAG	1 cut(s)	741
BfrI	CTTAAG	1 cut(s)	1258
BisI	GCNGC	4 cut(s)	246, 1116, 1668, 1712
BlsI	GCNGC	4 cut(s)	247, 1117, 1669, 1713
Bme1390I	CCNGG	4 cut(s)	772, 1228, 1290, 1602
Bme18I	GGWCC	1 cut(s)	1605
BmgT120I	GGNCC	1 cut(s)	1605
BmiI	GGNNCC	3 cut(s)	1405, 1482, 1606
BmrFI	CCNGG	4 cut(s)	772, 1228, 1290, 1602
BmrI	ACTGGG	1 cut(s)	1589
BmsI	GCATC	4 cut(s)	871, 1298, 1339, 1658
BmuI	ACTGGG	1 cut(s)	1589
BpiI	GAAGAC	3 cut(s)	173, 274, 367
BpmI	CTGGAG	2 cut(s)	1311, 1460
Bpu14I	TTCGAA	1 cut(s)	524
BpuEI	CTTGAG	1 cut(s)	1087
BpuMI	CCSGG	1 cut(s)	1228
Bsa29I	ATCGAT	1 cut(s)	1537
BsaBI	GATNNNNATC	1 cut(s)	1728
BsaJI	CCNNGG	3 cut(s)	420, 771, 1601
BsaXI	ACNNNNNCTCC	2 cut(s)	435, 465
Bsc4I	CCNNNNNNNGG	3 cut(s)	334, 335, 1742
Bse1I	ACTGG	2 cut(s)	1584, 1608
Bse3DI	GCAATG	3 cut(s)	125, 303, 1152
Bse8I	GATNNNNATC	1 cut(s)	1728
BseBI	CCWGG	3 cut(s)	772, 1290, 1602
BseCI	ATCGAT	1 cut(s)	1537
BseDI	CCNNGG	3 cut(s)	420, 771, 1601
BseGI	GGATG	4 cut(s)	264, 586, 1313, 1424
BseJI	GATNNNNATC	1 cut(s)	1728
BseLI	CCNNNNNNNGG	3 cut(s)	334, 335, 1742
BseMI	GCAATG	3 cut(s)	125, 303, 1152
BseMII	CTCAG	2 cut(s)	564, 827
BseNI	ACTGG	2 cut(s)	1584, 1608
BseXI	GCAGC	4 cut(s)	257, 1127, 1679, 1723
BseYI	CCCAGC	1 cut(s)	529
BsgI	GTGCAG	2 cut(s)	518, 1201
Bsh1236I	CGCG	1 cut(s)	15
BshFI	GGCC	1 cut(s)	1245
BshNI	GGYRCC	1 cut(s)	1403
BshVI	ATCGAT	1 cut(s)	1537
BsiHKAI	GWGCWC	2 cut(s)	919, 931
BsiSI	CCGG	1 cut(s)	1227
BsiWI	CGTACG	1 cut(s)	1558
BslFI	GGGAC	1 cut(s)	546
BslI	CCNNNNNNNGG	3 cut(s)	334, 335, 1742
BsmAI	GTCTC	1 cut(s)	715
BsmFI	GGGAC	1 cut(s)	546
BsnI	GGCC	1 cut(s)	1245
Bsp119I	TTCGAA	1 cut(s)	524
Bsp1286I	GDGCHC	3 cut(s)	919, 931, 1048
Bsp1407I	TGTACA	1 cut(s)	451
Bsp143I	GATC	8 cut(s)	111, 300, 405, 705, 780, 798, 979, 1318
BspACI	CCGC	4 cut(s)	213, 232, 321, 884
BspANI	GGCC	1 cut(s)	1245
BspCNI	CTCAG	2 cut(s)	565, 826
BspDI	ATCGAT	1 cut(s)	1537
BspFNI	CGCG	1 cut(s)	15
BspLI	GGNNCC	3 cut(s)	1405, 1482, 1606
BspMAI	CTGCAG	1 cut(s)	745
BspPI	GGATC	2 cut(s)	119, 1326
BspT104I	TTCGAA	1 cut(s)	524
BspT107I	GGYRCC	1 cut(s)	1403
BspTI	CTTAAG	1 cut(s)	1258
BsrDI	GCAATG	3 cut(s)	125, 303, 1152
BsrGI	TGTACA	1 cut(s)	451
BsrI	ACTGG	2 cut(s)	1584, 1608
BssECI	CCNNGG	3 cut(s)	420, 771, 1601
BssMI	GATC	8 cut(s)	111, 300, 405, 705, 780, 798, 979, 1318
BssSI	CACGAG	2 cut(s)	618, 784
Bst2BI	CACGAG	2 cut(s)	618, 784
Bst2UI	CCWGG	3 cut(s)	772, 1290, 1602
Bst4CI	ACNGT	3 cut(s)	38, 844, 901
BstAFI	CTTAAG	1 cut(s)	1258
BstAUI	TGTACA	1 cut(s)	451
BstBI	TTCGAA	1 cut(s)	524
BstC8I	GCNNGC	4 cut(s)	1113, 1216, 1336, 1340
BstDEI	CTNAG	2 cut(s)	573, 813
BstEII	GGTNACC	1 cut(s)	886
BstF5I	GGATG	4 cut(s)	264, 586, 1313, 1424
BstFNI	CGCG	1 cut(s)	15
BstHHI	GCGC	1 cut(s)	550
BstKTI	GATC	8 cut(s)	114, 303, 408, 708, 783, 801, 982, 1321
BstMAI	GTCTC	1 cut(s)	715
BstMBI	GATC	8 cut(s)	111, 300, 405, 705, 780, 798, 979, 1318
BstMWI	GCNNNNNNNGC	5 cut(s)	251, 686, 1136, 1335, 1717
BstNI	CCWGG	3 cut(s)	772, 1290, 1602
BstNSI	RCATGY	2 cut(s)	491, 1522
BstPI	GGTNACC	1 cut(s)	886
BstSCI	CCNGG	4 cut(s)	770, 1226, 1288, 1600
BstSFI	CTRYAG	1 cut(s)	741
BstUI	CGCG	1 cut(s)	15
BstV1I	GCAGC	4 cut(s)	257, 1127, 1679, 1723
BstV2I	GAAGAC	3 cut(s)	173, 274, 367
BstX2I	RGATCY	1 cut(s)	1318
BstYI	RGATCY	1 cut(s)	1318
Bsu15I	ATCGAT	1 cut(s)	1537
BsuRI	GGCC	1 cut(s)	1245
BsuTUI	ATCGAT	1 cut(s)	1537
BtsCI	GGATG	4 cut(s)	264, 586, 1313, 1424
BtsI	GCAGTG	1 cut(s)	316
BtsIMutI	CAGTG	3 cut(s)	316, 849, 1104
Cac8I	GCNNGC	4 cut(s)	1113, 1216, 1336, 1340
CaiI	CAGNNNCTG	2 cut(s)	1652, 1673
CfoI	GCGC	1 cut(s)	550
Cfr13I	GGNCC	1 cut(s)	1605
ClaI	ATCGAT	1 cut(s)	1537
Csp6I	GTAC	3 cut(s)	126, 452, 1559
CviQI	GTAC	3 cut(s)	126, 452, 1559
DdeI	CTNAG	2 cut(s)	573, 813
DpnI	GATC	8 cut(s)	113, 302, 407, 707, 782, 800, 981, 1320
DpnII	GATC	8 cut(s)	111, 300, 405, 705, 780, 798, 979, 1318
Ecl136II	GAGCTC	1 cut(s)	929
Eco24I	GRGCYC	2 cut(s)	931, 1048
Eco47I	GGWCC	1 cut(s)	1605
Eco53kI	GAGCTC	1 cut(s)	929
Eco57I	CTGAAG	1 cut(s)	1736
Eco91I	GGTNACC	1 cut(s)	886
EcoICRI	GAGCTC	1 cut(s)	929
EcoO65I	GGTNACC	1 cut(s)	886
EcoRI	GAATTC	1 cut(s)	1093
EcoRII	CCWGG	3 cut(s)	770, 1288, 1600
EcoT22I	ATGCAT	1 cut(s)	1313
EcoT38I	GRGCYC	2 cut(s)	931, 1048
FaqI	GGGAC	1 cut(s)	546
FauI	CCCGC	1 cut(s)	239
FbaI	TGATCA	3 cut(s)	300, 405, 798
FblI	GTMKAC	2 cut(s)	288, 896
Fnu4HI	GCNGC	4 cut(s)	246, 1116, 1668, 1712
FokI	GGATG	4 cut(s)	251, 593, 1320, 1431
FriOI	GRGCYC	2 cut(s)	931, 1048
Fsp4HI	GCNGC	4 cut(s)	246, 1116, 1668, 1712
FspBI	CTAG	4 cut(s)	140, 236, 932, 1142
GlaI	GCGC	1 cut(s)	549
GluI	GCNGC	4 cut(s)	246, 1116, 1668, 1712
GsaI	CCCAGC	1 cut(s)	533
GsuI	CTGGAG	2 cut(s)	1311, 1460
HaeIII	GGCC	1 cut(s)	1245
HapII	CCGG	1 cut(s)	1227
HhaI	GCGC	1 cut(s)	550
Hin6I	GCGC	1 cut(s)	548
HinP1I	GCGC	1 cut(s)	548
HincII	GTYRAC	2 cut(s)	897, 1516
HindII	GTYRAC	2 cut(s)	897, 1516
HindIII	AAGCTT	1 cut(s)	1718
HinfI	GANTC	5 cut(s)	10, 185, 737, 949, 1254
HpaI	GTTAAC	1 cut(s)	1516
HpaII	CCGG	1 cut(s)	1227
HphI	GGTGA	5 cut(s)	202, 554, 740, 898, 1688
Hpy166II	GTNNAC	7 cut(s)	289, 316, 485, 789, 897, 1424, 1516
Hpy188I	TCNGA	5 cut(s)	85, 816, 926, 1654, 1750
Hpy188III	TCNNGA	5 cut(s)	878, 932, 983, 1439, 1736
Hpy8I	GTNNAC	7 cut(s)	289, 316, 485, 789, 897, 1424, 1516
Hpy99I	CGWCG	1 cut(s)	713
HpyAV	CCTTC	5 cut(s)	105, 199, 547, 1100, 1235
HpyCH4III	ACNGT	3 cut(s)	38, 844, 901
HpyCH4IV	ACGT	3 cut(s)	279, 1557, 1640
HpyCH4V	TGCA	9 cut(s)	499, 743, 1022, 1115, 1218, 1311, 1553, 1667, 1697
HpyF10VI	GCNNNNNNNGC	5 cut(s)	251, 686, 1136, 1335, 1717
HpyF3I	CTNAG	2 cut(s)	573, 813
HpySE526I	ACGT	3 cut(s)	279, 1557, 1640
HspAI	GCGC	1 cut(s)	548
Ksp22I	TGATCA	3 cut(s)	300, 405, 798
KspAI	GTTAAC	1 cut(s)	1516
Kzo9I	GATC	8 cut(s)	111, 300, 405, 705, 780, 798, 979, 1318
LmnI	GCTCC	2 cut(s)	926, 1480
Lsp1109I	GCAGC	4 cut(s)	257, 1127, 1679, 1723
LweI	GCATC	4 cut(s)	871, 1298, 1339, 1658
MaeI	CTAG	4 cut(s)	140, 236, 932, 1142
MaeII	ACGT	3 cut(s)	279, 1557, 1640
MaeIII	GTNAC	1 cut(s)	886
MalI	GATC	8 cut(s)	113, 302, 407, 707, 782, 800, 981, 1320
MboI	GATC	8 cut(s)	111, 300, 405, 705, 780, 798, 979, 1318
MboII	GAAGA	9 cut(s)	53, 178, 274, 367, 600, 1183, 1250, 1358, 1724
MfeI	CAATTG	1 cut(s)	802
MflI	RGATCY	1 cut(s)	1318
MhlI	GDGCHC	3 cut(s)	919, 931, 1048
MlyI	GAGTC	2 cut(s)	179, 746
MmeI	TCCRAC	2 cut(s)	1070, 1592
Mph1103I	ATGCAT	1 cut(s)	1313
MroXI	GAANNNNTTC	2 cut(s)	557, 1082
MseI	TTAA	8 cut(s)	756, 839, 849, 1062, 1208, 1259, 1325, 1515
MslI	CAYNNNNRTG	3 cut(s)	459, 618, 1125
MspA1I	CMGCKG	1 cut(s)	1714
MspCI	CTTAAG	1 cut(s)	1258
MspI	CCGG	1 cut(s)	1227
MspR9I	CCNGG	4 cut(s)	772, 1228, 1290, 1602
MunI	CAATTG	1 cut(s)	802
MvaI	CCWGG	3 cut(s)	772, 1290, 1602
MvnI	CGCG	1 cut(s)	15
MwoI	GCNNNNNNNGC	5 cut(s)	251, 686, 1136, 1335, 1717
NciI	CCSGG	1 cut(s)	1228
NdeII	GATC	8 cut(s)	111, 300, 405, 705, 780, 798, 979, 1318
NlaIV	GGNNCC	3 cut(s)	1405, 1482, 1606
NmuCI	GTSAC	1 cut(s)	886
NsiI	ATGCAT	1 cut(s)	1313
NspI	RCATGY	2 cut(s)	491, 1522
NspV	TTCGAA	1 cut(s)	524
PciI	ACATGT	2 cut(s)	487, 1518
PdmI	GAANNNNTTC	2 cut(s)	557, 1082
PfeI	GAWTC	3 cut(s)	10, 949, 1254
Pfl23II	CGTACG	1 cut(s)	1558
PflFI	GACNNNGTC	1 cut(s)	892
PfoI	TCCNGGA	1 cut(s)	1288
PkrI	GCNGC	4 cut(s)	247, 1117, 1669, 1713
PleI	GAGTC	2 cut(s)	179, 745
PpsI	GAGTC	2 cut(s)	179, 745
PscI	ACATGT	2 cut(s)	487, 1518
PsiI	TTATAA	1 cut(s)	1199
Psp124BI	GAGCTC	1 cut(s)	931
Psp6I	CCWGG	3 cut(s)	770, 1288, 1600
PspEI	GGTNACC	1 cut(s)	886
PspFI	CCCAGC	1 cut(s)	529
PspGI	CCWGG	3 cut(s)	770, 1288, 1600
PspLI	CGTACG	1 cut(s)	1558
PspN4I	GGNNCC	3 cut(s)	1405, 1482, 1606
PspPI	GGNCC	1 cut(s)	1605
PstI	CTGCAG	1 cut(s)	745
PstNI	CAGNNNCTG	2 cut(s)	1652, 1673
PsuI	RGATCY	1 cut(s)	1318
PsyI	GACNNNGTC	1 cut(s)	892
PvuII	CAGCTG	1 cut(s)	1714
RsaI	GTAC	3 cut(s)	127, 453, 1560
RsaNI	GTAC	3 cut(s)	126, 452, 1559
RseI	CAYNNNNRTG	3 cut(s)	459, 618, 1125
SacI	GAGCTC	1 cut(s)	931
SalI	GTCGAC	1 cut(s)	895
SaqAI	TTAA	8 cut(s)	756, 839, 849, 1062, 1208, 1259, 1325, 1515
SatI	GCNGC	4 cut(s)	246, 1116, 1668, 1712
Sau3AI	GATC	8 cut(s)	111, 300, 405, 705, 780, 798, 979, 1318
Sau96I	GGNCC	1 cut(s)	1605
SchI	GAGTC	2 cut(s)	179, 746
ScrFI	CCNGG	4 cut(s)	772, 1228, 1290, 1602
SduI	GDGCHC	3 cut(s)	919, 931, 1048
SfaNI	GCATC	4 cut(s)	871, 1298, 1339, 1658
SfcI	CTRYAG	1 cut(s)	741
SfuI	TTCGAA	1 cut(s)	524
SinI	GGWCC	1 cut(s)	1605
SmiMI	CAYNNNNRTG	3 cut(s)	459, 618, 1125
SmlI	CTYRAG	2 cut(s)	1066, 1258
SmoI	CTYRAG	2 cut(s)	1066, 1258
SsiI	CCGC	4 cut(s)	213, 232, 321, 884
SspMI	CTAG	4 cut(s)	140, 236, 932, 1142
SstI	GAGCTC	1 cut(s)	931
StyD4I	CCNGG	4 cut(s)	770, 1226, 1288, 1600
TaaI	ACNGT	3 cut(s)	38, 844, 901
TaiI	ACGT	3 cut(s)	282, 1560, 1643
TaqI	TCGA	6 cut(s)	524, 561, 708, 896, 1344, 1537
TatI	WGTACW	1 cut(s)	451
TfiI	GAWTC	3 cut(s)	10, 949, 1254
Tru1I	TTAA	8 cut(s)	756, 839, 849, 1062, 1208, 1259, 1325, 1515
Tru9I	TTAA	8 cut(s)	756, 839, 849, 1062, 1208, 1259, 1325, 1515
TscAI	CASTG	3 cut(s)	323, 849, 1104
TseFI	GTSAC	1 cut(s)	886
TseI	GCWGC	4 cut(s)	245, 1115, 1667, 1711
Tsp45I	GTSAC	1 cut(s)	886
TspDTI	ATGAA	6 cut(s)	179, 579, 1388, 1418, 1479, 1586
TspGWI	ACGGA	1 cut(s)	387
TspRI	CASTG	3 cut(s)	323, 849, 1104
Tth111I	GACNNNGTC	1 cut(s)	892
Vha464I	CTTAAG	1 cut(s)	1258
VpaK11BI	GGWCC	1 cut(s)	1605
XapI	RAATTY	3 cut(s)	824, 1093, 1680
XbaI	TCTAGA	1 cut(s)	931
XceI	RCATGY	2 cut(s)	491, 1522
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1468
XmiI	GTMKAC	2 cut(s)	288, 896
XmnI	GAANNNNTTC	2 cut(s)	557, 1082
XspI	CTAG	4 cut(s)	140, 236, 932, 1142
Zsp2I	ATGCAT	1 cut(s)	1313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.