Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0007075

Physical Location & Seq

Genomic Coordinates Reverse (-)

32767131 .. 32768879

Gene Structure 1749 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1200200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGAAATGCCCAACGAACTTTAACTGTTTTTCAAACCCAAAACGTCTTCTCCAACCGCCCAAAACCCAAAACCCTCAGAACCCACCATCCATAGTTGAAAAATTAAAGAAATGTTCGACTCCAACGGAGCTAGAAAGTTTATGTGCCTCAATGATCAAGACCAATGCCATCCAAGACTCTTTCTTTACGAACCAACTCATCACCGCCTTTTCGACCTTTTCCCGCCTAGATTATGCAGTTTTAGCCTTCACCCAGATGGAAAATCCGAATGTTTTCGTCTACAATGCGATGATCAGAGGCTTTGTTCATTGCGACCACCCGTTTCAGGCTTTGAATTGTTACATCAATATGTTGAGGGACATGGTTTTGCCTAGCAGTTATACGTTTTCGCCATTGATCAAGGCCTGCACCTCTCTGTCTGCATTGCGGGTTGGAGAGTCTGTTCATTGTCACATTTGGAGAAATGGGTTTGGCTCACATGTGTTTGTTCAGACTGCTTTGATTGATTTTTACTCGAAGTTGCGCCGAATAAGTGAATCCAGAAGGGTGTTTGATGAAATGCCTGACAGAGACGCTTTTGCATGGACTACAATGGTTTCGTCTCATTCTCGAGTGGGGGATATGAGTTCGGCGAGGATATTATTTGATGAGATGACGGAGAGGAATGCAGCTACTTGGAATACAATGATTGATGGCTACGCAAGAGTAGGCGATGTGGAGTCTGCAGAGTTGTTGTTTAATCAGATGCCAACTAGGGATATAATATCATGGACTACTATGATTGATTGCTATTCTCAGAACAAGAAATTTCGAGAAGCGTTAGCAGTTTTCGATGACATGAGGACAAATGGGATCGGCTCTGATGAAGTGACCTTGGCAACTGTTATTTCGGCTTGTGCCCATCTCGGAGCTCTTGACTTGGGAAAAGAGATACATCTTTACGCAATGGAGAACAGATTTGATCTCGATGTTTATATCGGATCTGCACTGATTGATATGTATGCTAAGTGTGGCACATTGGAGAGGTCTCTTTTGGTTTTCTTTAAATTGCGGGATAAGAACCTGTTCTGCTGGAATGCAGCGATCGAAGGGCTCGCAGTTCACGGATATGCAAAAGAAGCACTAGCAATGTTCAGCAAGATGGAGAGAGAGGAGATCAAGCCAAATGGGGTTACTTTTGTAAGTGTCTTAAGTGCCTGCACTCATGCAGGACTTGTAGAAGAAGGCCACAGGAGATTTTCAAGCATGATCCAGGATTATTCCATCCGTCCCGAAGTTGAGCACTATGGATGCATGGTGGATCTGTTGAGCAAAGCCGGCCTGCTTGAAAATGCACTAGGGTTGATAAGAAGCATGGAGTTTGAACCGAACTCTGTTATATGGGGTGCATTGTTAGGTGGATGCAAGCTTCATAAAAACTTGGAGATTGCTCAAGTTTGTGTCGAGGGGTTGATGGTGTTGGAGCCAAATAGTAGCGGGTATTTCAACCTTTTGGTGAACATGTGTGCTGATGCAAAACGATGGGGAGAAGTTGCGGATATTCGAGCCACCATGAAGGAACTCGGAGTTGAAAAGGGATGTCCTGGGTCCAGTTGGATAGAAATGGAAAGGAAAGTTCATCAGTTTGCAGCGTCTGATGAATCTCATTCAGCTTCTGCTGAAATTTACTCGTTGCTGGCGGAATTATATGTGCAGCTGAAACTTGATGTTTATGTTCCTGAACTTGATGTTTGTGTTCCTGAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003700 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006355 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016787 GO:0016788 GO:0019219 GO:0019222 GO:0019538 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034641 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:0099402 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 bHLH-MYC_N

Protein Analysis

583

Amino Acids

65.39

Weight (kDa)

5.54

Isoelectric Point (pI)

40.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	89 - 136	2.5e-09	PPR repeat family
PPR_1	PF12854	221 - 249	2.5e-07	PPR repeat
PPR_2	PF13041	222 - 253	4e-07	PPR repeat family
PPR	PF01535	225 - 253	4.5e-08	PPR repeat
PPR_2	PF13041	252 - 301	6.7e-12	PPR repeat family
PPR	PF01535	255 - 285	7.5e-09	PPR repeat
PPR_2	PF13041	354 - 401	1.1e-08	PPR repeat family
E_motif	PF20431	471 - 534	3.6e-12	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007075)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06143
fragaria_vesca	FvH4_2g21860
malus_domestica	MD05G1200200.v1.1 MD10G1186800.v1.1
prunus_persica	Prupe.8G226200_v2.0.a1
pyrus_communis	pycom05g18700
rosa_chinensis	RchiOBHm_Chr6g0288721 RchiOBHm_Chr6g0288731
rosa_laevigata	RLG00000012369 RLG00000012373 RLG00000012374 RLG00000012381
rosa_multiflora	Rmu_sc0004861.1_g000010
rosa_roxburghii	Rroxscaffold_7G00179910
rosa_rugosa	Rorug06G0197800 Rorug06G0197900 Rorug06G0198000
rosa_samantha	Rh6BG314900 Rh6BG315000 Rh6CG322200 Rh6CG322300 Rh6DG308000 Rh6DG308100
rosa_wichuraiana	Rw6G026720 Rw6G026730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	279
AciI	CCGC	8 cut(s)	56, 204, 223, 427, 1051, 1476, 1535, 1679
AclWI	GGATC	4 cut(s)	860, 988, 1243, 1308
AcsI	RAATTY	2 cut(s)	806, 1662
AfiI	CCNNNNNNNGG	1 cut(s)	325
AflII	CTTAAG	1 cut(s)	1189
AflIII	ACRYGT	2 cut(s)	478, 1500
AgsI	TTSAA	8 cut(s)	33, 98, 334, 1242, 1328, 1364, 1486, 1571
AjnI	CCWGG	2 cut(s)	1251, 1582
AloI	GAACNNNNNNTCC	4 cut(s)	71, 103, 426, 458
AluBI	AGCT	6 cut(s)	130, 671, 911, 1408, 1652, 1696
AluI	AGCT	6 cut(s)	130, 671, 911, 1408, 1652, 1696
Alw21I	GWGCWC	2 cut(s)	913, 1284
Alw26I	GTCTC	3 cut(s)	564, 606, 1032
AlwI	GGATC	4 cut(s)	860, 988, 1243, 1308
AlwNI	CAGNNNCTG	2 cut(s)	1634, 1655
Ama87I	CYCGRG	1 cut(s)	609
AoxI	GGCC	3 cut(s)	402, 1225, 1318
ApeKI	GCWGC	4 cut(s)	668, 1079, 1628, 1693
ApoI	RAATTY	2 cut(s)	806, 1662
Asp700I	GAANNNNTTC	2 cut(s)	272, 1064
AspLEI	GCGC	1 cut(s)	525
AspS9I	GGNCC	1 cut(s)	1587
AsuHPI	GGTGA	3 cut(s)	193, 241, 1507
AvaI	CYCGRG	1 cut(s)	609
AvaII	GGWCC	1 cut(s)	1587
BaeGI	GKGCMC	1 cut(s)	901
BanII	GRGCYC	2 cut(s)	913, 1095
BbsI	GAAGAC	1 cut(s)	38
Bbv12I	GWGCWC	2 cut(s)	913, 1284
BbvI	GCAGC	4 cut(s)	680, 1091, 1640, 1705
BccI	CCATC	9 cut(s)	94, 176, 250, 686, 909, 1135, 1271, 1447, 1515
BciT130I	CCWGG	2 cut(s)	1253, 1584
BclI	TGATCA	3 cut(s)	153, 291, 396
BcoDI	GTCTC	3 cut(s)	564, 606, 1032
BfaI	CTAG	6 cut(s)	131, 227, 372, 753, 1124, 1337
BfmI	CTRYAG	1 cut(s)	723
BfrI	CTTAAG	1 cut(s)	1189
BisI	GCNGC	4 cut(s)	669, 1080, 1629, 1694
BlsI	GCNGC	4 cut(s)	670, 1081, 1630, 1695
Bme1390I	CCNGG	2 cut(s)	1253, 1584
Bme18I	GGWCC	1 cut(s)	1587
BmeT110I	CYCGRG	1 cut(s)	609
BmgT120I	GGNCC	1 cut(s)	1587
BmiI	GGNNCC	2 cut(s)	1464, 1588
BmrFI	CCNGG	2 cut(s)	1253, 1584
BmsI	GCATC	4 cut(s)	735, 1280, 1391, 1501
BpiI	GAAGAC	1 cut(s)	38
BpuEI	CTTGAG	1 cut(s)	1416
BsaI	GGTCTC	1 cut(s)	1032
BsaJI	CCNNGG	2 cut(s)	873, 1583
BsaXI	ACNNNNNCTCC	4 cut(s)	33, 63, 426, 456
Bsc4I	CCNNNNNNNGG	1 cut(s)	325
Bse118I	RCCGGY	1 cut(s)	1316
Bse1I	ACTGG	1 cut(s)	1590
Bse3DI	GCAATG	4 cut(s)	307, 422, 951, 1134
BseBI	CCWGG	2 cut(s)	1253, 1584
BseDI	CCNNGG	2 cut(s)	873, 1583
BseGI	GGATG	6 cut(s)	86, 168, 1263, 1295, 1406, 1583
BseLI	CCNNNNNNNGG	1 cut(s)	325
BseMI	GCAATG	4 cut(s)	307, 422, 951, 1134
BseMII	CTCAG	2 cut(s)	89, 809
BseNI	ACTGG	1 cut(s)	1590
BseRI	GAGGAG	1 cut(s)	1166
BseSI	GKGCMC	1 cut(s)	901
BseXI	GCAGC	4 cut(s)	680, 1091, 1640, 1705
BsgI	GTGCAG	4 cut(s)	391, 969, 1183, 1712
Bsh1285I	CGRYCG	1 cut(s)	1086
BshFI	GGCC	3 cut(s)	404, 1227, 1320
BsiEI	CGRYCG	1 cut(s)	1086
BsiHKAI	GWGCWC	2 cut(s)	913, 1284
BsiHKCI	CYCGRG	1 cut(s)	609
BsiSI	CCGG	1 cut(s)	1317
BslFI	GGGAC	2 cut(s)	371, 1254
BslI	CCNNNNNNNGG	1 cut(s)	325
BsmAI	GTCTC	3 cut(s)	564, 606, 1032
BsmBI	CGTCTC	2 cut(s)	564, 606
BsmFI	GGGAC	2 cut(s)	371, 1254
BsmI	GAATGC	2 cut(s)	670, 1081
BsnI	GGCC	3 cut(s)	404, 1227, 1320
Bso31I	GGTCTC	1 cut(s)	1032
BsoBI	CYCGRG	1 cut(s)	609
Bsp1286I	GDGCHC	4 cut(s)	901, 913, 1095, 1284
BspACI	CCGC	8 cut(s)	56, 204, 223, 427, 1051, 1476, 1535, 1679
BspANI	GGCC	3 cut(s)	404, 1227, 1320
BspCNI	CTCAG	2 cut(s)	88, 808
BspLI	GGNNCC	2 cut(s)	1464, 1588
BspMAI	CTGCAG	1 cut(s)	727
BspPI	GGATC	4 cut(s)	860, 988, 1243, 1308
BspTI	CTTAAG	1 cut(s)	1189
BspTNI	GGTCTC	1 cut(s)	1032
BsrDI	GCAATG	4 cut(s)	307, 422, 951, 1134
BsrFI	RCCGGY	1 cut(s)	1316
BsrI	ACTGG	1 cut(s)	1590
BssAI	RCCGGY	1 cut(s)	1316
BssECI	CCNNGG	2 cut(s)	873, 1583
BssT1I	CCWWGG	1 cut(s)	873
Bst2UI	CCWGG	2 cut(s)	1253, 1584
Bst4CI	ACNGT	2 cut(s)	26, 883
BstAFI	CTTAAG	1 cut(s)	1189
BstC8I	GCNNGC	7 cut(s)	406, 1095, 1198, 1318, 1322, 1406, 1677
BstDEI	CTNAG	3 cut(s)	75, 795, 1005
BstF5I	GGATG	6 cut(s)	86, 168, 1263, 1295, 1406, 1583
BstHHI	GCGC	1 cut(s)	525
BstMAI	GTCTC	3 cut(s)	564, 606, 1032
BstMCI	CGRYCG	1 cut(s)	1086
BstMWI	GCNNNNNNNGC	3 cut(s)	242, 1118, 1317
BstNI	CCWGG	2 cut(s)	1253, 1584
BstNSI	RCATGY	2 cut(s)	482, 1504
BstSCI	CCNGG	2 cut(s)	1251, 1582
BstSFI	CTRYAG	1 cut(s)	723
BstSLI	GKGCMC	1 cut(s)	901
BstV1I	GCAGC	4 cut(s)	680, 1091, 1640, 1705
BstV2I	GAAGAC	1 cut(s)	38
BstX2I	RGATCY	2 cut(s)	980, 1300
BstYI	RGATCY	2 cut(s)	980, 1300
BsuRI	GGCC	3 cut(s)	404, 1227, 1320
BtgZI	GCGATG	2 cut(s)	302, 726
BtsCI	GGATG	6 cut(s)	86, 168, 1263, 1295, 1406, 1583
BtsIMutI	CAGTG	1 cut(s)	986
Cac8I	GCNNGC	7 cut(s)	406, 1095, 1198, 1318, 1322, 1406, 1677
CaiI	CAGNNNCTG	2 cut(s)	1634, 1655
CfoI	GCGC	1 cut(s)	525
Cfr10I	RCCGGY	1 cut(s)	1316
Cfr13I	GGNCC	1 cut(s)	1587
CseI	GACGC	2 cut(s)	581, 1620
DdeI	CTNAG	3 cut(s)	75, 795, 1005
DraI	TTTAAA	1 cut(s)	1045
EciI	GGCGGA	1 cut(s)	1694
Ecl136II	GAGCTC	1 cut(s)	911
Eco130I	CCWWGG	1 cut(s)	873
Eco147I	AGGCCT	1 cut(s)	404
Eco24I	GRGCYC	2 cut(s)	913, 1095
Eco31I	GGTCTC	1 cut(s)	1032
Eco47I	GGWCC	1 cut(s)	1587
Eco53kI	GAGCTC	1 cut(s)	911
Eco88I	CYCGRG	1 cut(s)	609
EcoICRI	GAGCTC	1 cut(s)	911
EcoRII	CCWGG	2 cut(s)	1251, 1582
EcoT14I	CCWWGG	1 cut(s)	873
EcoT22I	ATGCAT	1 cut(s)	1295
EcoT38I	GRGCYC	2 cut(s)	913, 1095
ErhI	CCWWGG	1 cut(s)	873
Esp3I	CGTCTC	2 cut(s)	564, 606
FaqI	GGGAC	2 cut(s)	371, 1254
FauI	CCCGC	4 cut(s)	230, 420, 1044, 1469
FbaI	TGATCA	3 cut(s)	153, 291, 396
FblI	GTMKAC	1 cut(s)	279
Fnu4HI	GCNGC	4 cut(s)	669, 1080, 1629, 1694
FokI	GGATG	6 cut(s)	73, 155, 1250, 1302, 1413, 1590
FriOI	GRGCYC	2 cut(s)	913, 1095
Fsp4HI	GCNGC	4 cut(s)	669, 1080, 1629, 1694
FspBI	CTAG	6 cut(s)	131, 227, 372, 753, 1124, 1337
GlaI	GCGC	1 cut(s)	524
GluI	GCNGC	4 cut(s)	669, 1080, 1629, 1694
HaeIII	GGCC	3 cut(s)	404, 1227, 1320
HapII	CCGG	1 cut(s)	1317
HgaI	GACGC	2 cut(s)	581, 1620
HhaI	GCGC	1 cut(s)	525
Hin6I	GCGC	1 cut(s)	523
HinP1I	GCGC	1 cut(s)	523
HindIII	AAGCTT	1 cut(s)	1406
HinfI	GANTC	6 cut(s)	118, 176, 437, 536, 719, 1640
HpaII	CCGG	1 cut(s)	1317
HphI	GGTGA	3 cut(s)	193, 241, 1507
Hpy166II	GTNNAC	3 cut(s)	280, 1102, 1498
Hpy188III	TCNNGA	9 cut(s)	157, 540, 609, 812, 914, 965, 1271, 1718, 1739
Hpy8I	GTNNAC	3 cut(s)	280, 1102, 1498
HpyAV	CCTTC	5 cut(s)	256, 537, 1082, 1217, 1549
HpyCH4III	ACNGT	2 cut(s)	26, 883
HpyCH4IV	ACGT	2 cut(s)	43, 383
HpyF10VI	GCNNNNNNNGC	3 cut(s)	242, 1118, 1317
HpyF3I	CTNAG	3 cut(s)	75, 795, 1005
HpySE526I	ACGT	2 cut(s)	43, 383
HspAI	GCGC	1 cut(s)	523
KroI	GCCGGC	1 cut(s)	1316
KroNI	GCCGGC	1 cut(s)	1318
Ksp22I	TGATCA	3 cut(s)	153, 291, 396
LmnI	GCTCC	3 cut(s)	127, 908, 1462
Lsp1109I	GCAGC	4 cut(s)	680, 1091, 1640, 1705
LweI	GCATC	4 cut(s)	735, 1280, 1391, 1501
MaeI	CTAG	6 cut(s)	131, 227, 372, 753, 1124, 1337
MaeII	ACGT	2 cut(s)	43, 383
MaeIII	GTNAC	4 cut(s)	338, 449, 868, 1171
MboII	GAAGA	2 cut(s)	38, 1232
MflI	RGATCY	2 cut(s)	980, 1300
MhlI	GDGCHC	4 cut(s)	901, 913, 1095, 1284
MluCI	AATT	6 cut(s)	101, 334, 806, 1046, 1662, 1682
MlyI	GAGTC	4 cut(s)	112, 170, 446, 728
MmeI	TCCRAC	5 cut(s)	76, 146, 412, 1440, 1574
Mph1103I	ATGCAT	1 cut(s)	1295
MroNI	GCCGGC	1 cut(s)	1316
MroXI	GAANNNNTTC	2 cut(s)	272, 1064
MseI	TTAA	5 cut(s)	21, 104, 738, 1044, 1190
MslI	CAYNNNNRTG	3 cut(s)	254, 347, 1107
MspA1I	CMGCKG	1 cut(s)	1696
MspCI	CTTAAG	1 cut(s)	1189
MspI	CCGG	1 cut(s)	1317
MspR9I	CCNGG	2 cut(s)	1253, 1584
Mva1269I	GAATGC	2 cut(s)	670, 1081
MvaI	CCWGG	2 cut(s)	1253, 1584
MwoI	GCNNNNNNNGC	3 cut(s)	242, 1118, 1317
NaeI	GCCGGC	1 cut(s)	1318
NgoMIV	GCCGGC	1 cut(s)	1316
NlaIV	GGNNCC	2 cut(s)	1464, 1588
NmuCI	GTSAC	2 cut(s)	449, 868
NsiI	ATGCAT	1 cut(s)	1295
NspI	RCATGY	2 cut(s)	482, 1504
PaeR7I	CTCGAG	1 cut(s)	609
PceI	AGGCCT	1 cut(s)	404
PciI	ACATGT	2 cut(s)	478, 1500
PctI	GAATGC	2 cut(s)	670, 1081
PdiI	GCCGGC	1 cut(s)	1318
PdmI	GAANNNNTTC	2 cut(s)	272, 1064
PfeI	GAWTC	2 cut(s)	536, 1640
PfoI	TCCNGGA	1 cut(s)	1251
PkrI	GCNGC	4 cut(s)	670, 1081, 1630, 1695
Ple19I	CGATCG	1 cut(s)	1086
PleI	GAGTC	4 cut(s)	112, 170, 445, 727
PpsI	GAGTC	4 cut(s)	112, 170, 445, 727
PscI	ACATGT	2 cut(s)	478, 1500
Psp124BI	GAGCTC	1 cut(s)	913
Psp6I	CCWGG	2 cut(s)	1251, 1582
PspGI	CCWGG	2 cut(s)	1251, 1582
PspN4I	GGNNCC	2 cut(s)	1464, 1588
PspPI	GGNCC	1 cut(s)	1587
PstI	CTGCAG	1 cut(s)	727
PstNI	CAGNNNCTG	2 cut(s)	1634, 1655
PsuI	RGATCY	2 cut(s)	980, 1300
PvuI	CGATCG	1 cut(s)	1086
PvuII	CAGCTG	1 cut(s)	1696
RseI	CAYNNNNRTG	3 cut(s)	254, 347, 1107
SacI	GAGCTC	1 cut(s)	913
SaqAI	TTAA	5 cut(s)	21, 104, 738, 1044, 1190
SatI	GCNGC	4 cut(s)	669, 1080, 1629, 1694
Sau96I	GGNCC	1 cut(s)	1587
SchI	GAGTC	4 cut(s)	112, 170, 446, 728
ScrFI	CCNGG	2 cut(s)	1253, 1584
SduI	GDGCHC	4 cut(s)	901, 913, 1095, 1284
SfaNI	GCATC	4 cut(s)	735, 1280, 1391, 1501
SfcI	CTRYAG	1 cut(s)	723
Sfr274I	CTCGAG	1 cut(s)	609
SinI	GGWCC	1 cut(s)	1587
SlaI	CTCGAG	1 cut(s)	609
SmiMI	CAYNNNNRTG	3 cut(s)	254, 347, 1107
SmlI	CTYRAG	3 cut(s)	609, 1189, 1431
SmoI	CTYRAG	3 cut(s)	609, 1189, 1431
Sse9I	AATT	6 cut(s)	101, 334, 806, 1046, 1662, 1682
SseBI	AGGCCT	1 cut(s)	404
SsiI	CCGC	8 cut(s)	56, 204, 223, 427, 1051, 1476, 1535, 1679
SspMI	CTAG	6 cut(s)	131, 227, 372, 753, 1124, 1337
SstI	GAGCTC	1 cut(s)	913
StuI	AGGCCT	1 cut(s)	404
StyD4I	CCNGG	2 cut(s)	1251, 1582
StyI	CCWWGG	1 cut(s)	873
TaaI	ACNGT	2 cut(s)	26, 883
TaiI	ACGT	2 cut(s)	46, 386
TasI	AATT	6 cut(s)	101, 334, 806, 1046, 1662, 1682
TfiI	GAWTC	2 cut(s)	536, 1640
Tru1I	TTAA	5 cut(s)	21, 104, 738, 1044, 1190
Tru9I	TTAA	5 cut(s)	21, 104, 738, 1044, 1190
TscAI	CASTG	1 cut(s)	993
TseFI	GTSAC	2 cut(s)	449, 868
TseI	GCWGC	4 cut(s)	668, 1079, 1628, 1693
Tsp45I	GTSAC	2 cut(s)	449, 868
TspDTI	ATGAA	9 cut(s)	17, 296, 434, 570, 879, 1400, 1568, 1607, 1653
TspGWI	ACGGA	4 cut(s)	140, 671, 1119, 1256
TspRI	CASTG	1 cut(s)	993
Vha464I	CTTAAG	1 cut(s)	1189
VpaK11BI	GGWCC	1 cut(s)	1587
XapI	RAATTY	2 cut(s)	806, 1662
XceI	RCATGY	2 cut(s)	482, 1504
XhoI	CTCGAG	1 cut(s)	609
XmiI	GTMKAC	1 cut(s)	279
XmnI	GAANNNNTTC	2 cut(s)	272, 1064
XspI	CTAG	6 cut(s)	131, 227, 372, 753, 1124, 1337
Zsp2I	ATGCAT	1 cut(s)	1295

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.