FvH4_2g35710

Lactoylglutathione lyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0004018
Physical Location & Seq
Forward (+)
26325117 .. 26328923
3807 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g35710.t2

Sequence Viewer

Length: 1098 bp
ATGGCGTCTTTATCGGTCACTCTCAATCTCTTAAGGCCTTGTTCCATTGCCCGTAAGCCATCTCCTTCCTTGAGGTTCTTTGATGTCCGAAACTCTGCTTCTTCCTACTGTTCCACTTCTCGAAGACTCGCTCTCTTTCACCTTGGCTCTGCTCTTCCTCAGTCACAAATATTAGGGGCAAAAGCATCTCAATTGCTGAGAGGAGAGGGGAAACCTGTAGAGGCTGCCCCAGTTGCTGATTTGTCACAAGCAGGTGCTGCTATTGCTGAGGAAAATCCTTTGGAATGGGTGAAAGATGATAAACGAAGAATGCTTCATGTTGTCTATCGTGTTGGGGACTTGGACAAGACTATAAAGTTCTATACTGAGTGTTTGGGAATGAAGCTGTTGAGAAAACGTGACATACCAGAGGAGCAATATTCCAATGCTTTTCTTGGATATGGGCCAGAAGATTCCAACTTTACTGTTGAACTTACATATAATTATGGAGTGGACAAGTATGACATTGGGACTGGATTCGGCCACTTTGGTATTGCAGTTGAAGATGTTGCCAAAACAGTGGAACTTATAAAGGCAAAGGGAGGGAAAGTTACCAGGGAACCTGGTCCTGCCAATGGTGGCAGTACAATAATTGCTCTTATTGAGGATCCTGATGGTTATCCATTTGAACTTTTAGAGAAATGGCCTACACCAGAGCCCTTTTCACAAGTGATGCTTCGTGTGGGTGATCTTGACCGTGCTGTTAACTTTTATAAGAAGGCTTTTGGAATGGAACTTCTCCGCACAAGAGATAATCCTGAATACAAGTATACAGTAGCCATGTTGGGATATGGTACTGAAGATAACAGTCCAGTGCTTGAACTGACATATAACTATGGGATCACCGACTATGATAAAGGAAATGGTTATGCTCAGATAGCAATAGGCACAGACGATGTTTATAAAAGTGCAGACGCAGTTAGACTCTCTGGAGGGAAAATTATTCTTGAACCTGGTCCCTTGCCAGGTATCAACACCAAGATAACTGCTTGCTTAGACCCCGATGGATGGAAATCGGTTTTTGTTGACAATATTGATTTTCTGAAGGAACTAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00620 map00620
Pfam Domains
Protein Families
Glyoxalase

Protein Analysis

366

Amino Acids

40.23

Weight (kDa)

5.21

Isoelectric Point (pI)

37.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxalase PF00903 104 - 224 2.5e-26 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_4 PF13669 106 - 206 1e-10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase PF00903 235 - 314 2.1e-09 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 569, 753, 942
AarI CACCTGC 1 cut(s) 242
Acc36I ACCTGC 1 cut(s) 242
AccI GTMKAC 1 cut(s) 809
AciI CCGC 1 cut(s) 781
AclWI GGATC 3 cut(s) 641, 654, 887
AcoI YGGCCR 1 cut(s) 520
AcuI CTGAAG 1 cut(s) 858
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 2 cut(s) 625, 835
AfiI CCNNNNNNNGG 3 cut(s) 614, 1004, 1047
AflII CTTAAG 1 cut(s) 31
AgsI TTSAA 5 cut(s) 470, 542, 668, 860, 989
AjnI CCWGG 4 cut(s) 593, 601, 991, 1003
AluBI AGCT 1 cut(s) 385
AluI AGCT 1 cut(s) 385
AlwI GGATC 3 cut(s) 641, 654, 887
AlwNI CAGNNNCTG 2 cut(s) 236, 257
AoxI GGCC 4 cut(s) 35, 443, 520, 683
ApeKI GCWGC 2 cut(s) 224, 257
AspS9I GGNCC 3 cut(s) 443, 605, 995
AsuHPI GGTGA 4 cut(s) 131, 301, 737, 874
AvaII GGWCC 2 cut(s) 605, 995
BamHI GGATCC 1 cut(s) 646
BanII GRGCYC 1 cut(s) 699
BbsI GAAGAC 1 cut(s) 130
BbvCI CCTCAGC 1 cut(s) 267
BbvI GCAGC 2 cut(s) 211, 244
BccI CCATC 4 cut(s) 67, 647, 1037, 1041
BciT130I CCWGG 4 cut(s) 595, 603, 993, 1005
BfaI CTAG 1 cut(s) 1091
BfmI CTRYAG 1 cut(s) 216
BfrI CTTAAG 1 cut(s) 31
BfuAI ACCTGC 1 cut(s) 242
BisI GCNGC 2 cut(s) 225, 258
BlsI GCNGC 2 cut(s) 226, 259
Bme1390I CCNGG 4 cut(s) 595, 603, 993, 1005
Bme18I GGWCC 2 cut(s) 605, 995
BmgT120I GGNCC 3 cut(s) 443, 605, 995
BmiI GGNNCC 3 cut(s) 600, 648, 997
BmrFI CCNGG 4 cut(s) 595, 603, 993, 1005
BmrI ACTGGG 1 cut(s) 224
BmsI GCATC 2 cut(s) 194, 702
BmuI ACTGGG 1 cut(s) 224
BpiI GAAGAC 1 cut(s) 130
BpmI CTGGAG 1 cut(s) 990
Bpu10I CCTNAGC 1 cut(s) 267
BpuEI CTTGAG 1 cut(s) 91
BsaBI GATNNNNATC 2 cut(s) 657, 1051
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 142, 594
BsaXI ACNNNNNCTCC 2 cut(s) 573, 603
Bsc4I CCNNNNNNNGG 3 cut(s) 614, 1004, 1047
Bse1I ACTGG 3 cut(s) 230, 517, 851
Bse3DI GCAATG 1 cut(s) 45
Bse8I GATNNNNATC 2 cut(s) 657, 1051
BseBI CCWGG 4 cut(s) 595, 603, 993, 1005
BseDI CCNNGG 2 cut(s) 142, 594
BseGI GGATG 1 cut(s) 1052
BseJI GATNNNNATC 2 cut(s) 657, 1051
BseLI CCNNNNNNNGG 3 cut(s) 614, 1004, 1047
BseMI GCAATG 1 cut(s) 45
BseMII CTCAG 5 cut(s) 173, 188, 258, 357, 926
BseNI ACTGG 3 cut(s) 230, 517, 851
BseRI GAGGAG 2 cut(s) 216, 425
BseXI GCAGC 2 cut(s) 211, 244
BsgI GTGCAG 1 cut(s) 969
BshFI GGCC 4 cut(s) 37, 445, 522, 685
BslFI GGGAC 3 cut(s) 350, 523, 981
BslI CCNNNNNNNGG 3 cut(s) 614, 1004, 1047
BsmFI GGGAC 3 cut(s) 350, 523, 981
BsmI GAATGC 1 cut(s) 315
BsnI GGCC 4 cut(s) 37, 445, 522, 685
Bsp1286I GDGCHC 1 cut(s) 699
Bsp143I GATC 3 cut(s) 646, 727, 879
BspACI CCGC 1 cut(s) 781
BspANI GGCC 4 cut(s) 37, 445, 522, 685
BspCNI CTCAG 5 cut(s) 172, 189, 259, 358, 925
BspLI GGNNCC 3 cut(s) 600, 648, 997
BspMI ACCTGC 1 cut(s) 242
BspPI GGATC 3 cut(s) 641, 654, 887
BspQI GCTCTTC 1 cut(s) 159
BspTI CTTAAG 1 cut(s) 31
BsrDI GCAATG 1 cut(s) 45
BsrI ACTGG 3 cut(s) 230, 517, 851
BssECI CCNNGG 2 cut(s) 142, 594
BssMI GATC 3 cut(s) 646, 727, 879
BssNAI GTATAC 1 cut(s) 810
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 142
Bst1107I GTATAC 1 cut(s) 810
Bst2UI CCWGG 4 cut(s) 595, 603, 993, 1005
Bst4CI ACNGT 6 cut(s) 110, 466, 559, 737, 814, 848
Bst6I CTCTTC 1 cut(s) 159
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 31
BstAPI GCANNNNNTGC 1 cut(s) 257
BstC8I GCNNGC 1 cut(s) 1030
BstDEI CTNAG 6 cut(s) 159, 197, 267, 366, 912, 1033
BstF5I GGATG 1 cut(s) 1052
BstKTI GATC 3 cut(s) 649, 730, 882
BstMBI GATC 3 cut(s) 646, 727, 879
BstMWI GCNNNNNNNGC 4 cut(s) 233, 257, 263, 917
BstNI CCWGG 4 cut(s) 595, 603, 993, 1005
BstSCI CCNGG 4 cut(s) 593, 601, 991, 1003
BstSFI CTRYAG 1 cut(s) 216
BstV1I GCAGC 2 cut(s) 211, 244
BstV2I GAAGAC 1 cut(s) 130
BstX2I RGATCY 1 cut(s) 646
BstXI CCANNNNNNTGG 1 cut(s) 559
BstYI RGATCY 1 cut(s) 646
BstZ17I GTATAC 1 cut(s) 810
BsuRI GGCC 4 cut(s) 37, 445, 522, 685
BtsCI GGATG 1 cut(s) 1052
BtsIMutI CAGTG 2 cut(s) 564, 858
BveI ACCTGC 1 cut(s) 242
Cac8I GCNNGC 1 cut(s) 1030
CaiI CAGNNNCTG 2 cut(s) 236, 257
Cfr13I GGNCC 3 cut(s) 443, 605, 995
CseI GACGC 1 cut(s) 962
CsiI ACCWGGT 2 cut(s) 601, 991
Csp6I GTAC 2 cut(s) 624, 834
CviAII CATG 2 cut(s) 317, 820
CviQI GTAC 2 cut(s) 624, 834
DdeI CTNAG 6 cut(s) 159, 197, 267, 366, 912, 1033
DpnI GATC 3 cut(s) 648, 729, 881
DpnII GATC 3 cut(s) 646, 727, 879
EaeI YGGCCR 1 cut(s) 520
Eam1104I CTCTTC 1 cut(s) 159
EarI CTCTTC 1 cut(s) 159
Eco130I CCWWGG 1 cut(s) 142
Eco147I AGGCCT 1 cut(s) 37
Eco24I GRGCYC 1 cut(s) 699
Eco47I GGWCC 2 cut(s) 605, 995
Eco57I CTGAAG 1 cut(s) 858
EcoRII CCWGG 4 cut(s) 593, 601, 991, 1003
EcoT14I CCWWGG 1 cut(s) 142
EcoT38I GRGCYC 1 cut(s) 699
ErhI CCWWGG 1 cut(s) 142
FaeI CATG 2 cut(s) 320, 823
FalI AAGNNNNNCTT 2 cut(s) 699, 731
FaqI GGGAC 3 cut(s) 350, 523, 981
FatI CATG 2 cut(s) 316, 819
FblI GTMKAC 1 cut(s) 809
Fnu4HI GCNGC 2 cut(s) 225, 258
FokI GGATG 1 cut(s) 1059
FriOI GRGCYC 1 cut(s) 699
Fsp4HI GCNGC 2 cut(s) 225, 258
FspBI CTAG 1 cut(s) 1091
GluI GCNGC 2 cut(s) 225, 258
GsuI CTGGAG 1 cut(s) 990
HaeIII GGCC 4 cut(s) 37, 445, 522, 685
HgaI GACGC 1 cut(s) 962
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 2 cut(s) 320, 823
HincII GTYRAC 2 cut(s) 745, 1066
HindII GTYRAC 2 cut(s) 745, 1066
HinfI GANTC 4 cut(s) 126, 452, 516, 963
HpaI GTTAAC 1 cut(s) 745
HphI GGTGA 4 cut(s) 131, 301, 737, 874
Hpy166II GTNNAC 4 cut(s) 493, 745, 810, 1066
Hpy188I TCNGA 3 cut(s) 89, 915, 1083
Hpy188III TCNNGA 6 cut(s) 120, 650, 731, 797, 969, 986
Hpy8I GTNNAC 4 cut(s) 493, 745, 810, 1066
HpyAV CCTTC 3 cut(s) 75, 751, 1078
HpyCH4III ACNGT 6 cut(s) 110, 466, 559, 737, 814, 848
HpyCH4IV ACGT 1 cut(s) 397
HpyCH4V TGCA 2 cut(s) 536, 950
HpyF10VI GCNNNNNNNGC 4 cut(s) 233, 257, 263, 917
HpyF3I CTNAG 6 cut(s) 159, 197, 267, 366, 912, 1033
HpySE526I ACGT 1 cut(s) 397
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 2 cut(s) 320, 823
KspAI GTTAAC 1 cut(s) 745
Kzo9I GATC 3 cut(s) 646, 727, 879
LguI GCTCTTC 1 cut(s) 159
LmnI GCTCC 1 cut(s) 412
Lsp1109I GCAGC 2 cut(s) 211, 244
LweI GCATC 2 cut(s) 194, 702
MabI ACCWGGT 2 cut(s) 601, 991
MaeI CTAG 1 cut(s) 1091
MaeII ACGT 1 cut(s) 397
MaeIII GTNAC 5 cut(s) 16, 162, 243, 398, 589
MalI GATC 3 cut(s) 648, 729, 881
MboI GATC 3 cut(s) 646, 727, 879
MboII GAAGA 7 cut(s) 93, 135, 146, 318, 461, 554, 851
MfeI CAATTG 1 cut(s) 191
MflI RGATCY 1 cut(s) 646
MhlI GDGCHC 1 cut(s) 699
MluCI AATT 4 cut(s) 191, 481, 630, 978
MlyI GAGTC 2 cut(s) 120, 957
MmeI TCCRAC 1 cut(s) 480
MseI TTAA 2 cut(s) 32, 744
MspCI CTTAAG 1 cut(s) 31
MspR9I CCNGG 4 cut(s) 595, 603, 993, 1005
MunI CAATTG 1 cut(s) 191
Mva1269I GAATGC 1 cut(s) 315
MvaI CCWGG 4 cut(s) 595, 603, 993, 1005
MwoI GCNNNNNNNGC 4 cut(s) 233, 257, 263, 917
NdeII GATC 3 cut(s) 646, 727, 879
NlaIII CATG 2 cut(s) 320, 823
NlaIV GGNNCC 3 cut(s) 600, 648, 997
NmuCI GTSAC 4 cut(s) 16, 162, 243, 398
PaqCI CACCTGC 1 cut(s) 242
PceI AGGCCT 1 cut(s) 37
PciSI GCTCTTC 1 cut(s) 159
PctI GAATGC 1 cut(s) 315
PfeI GAWTC 2 cut(s) 452, 516
PkrI GCNGC 2 cut(s) 226, 259
PleI GAGTC 2 cut(s) 120, 957
PpsI GAGTC 2 cut(s) 120, 957
PsiI TTATAA 3 cut(s) 569, 753, 942
Psp6I CCWGG 4 cut(s) 593, 601, 991, 1003
PspGI CCWGG 4 cut(s) 593, 601, 991, 1003
PspN4I GGNNCC 3 cut(s) 600, 648, 997
PspPI GGNCC 3 cut(s) 443, 605, 995
PstNI CAGNNNCTG 2 cut(s) 236, 257
PsuI RGATCY 1 cut(s) 646
RsaI GTAC 2 cut(s) 625, 835
RsaNI GTAC 2 cut(s) 624, 834
SapI GCTCTTC 1 cut(s) 159
SaqAI TTAA 2 cut(s) 32, 744
SatI GCNGC 2 cut(s) 225, 258
Sau3AI GATC 3 cut(s) 646, 727, 879
Sau96I GGNCC 3 cut(s) 443, 605, 995
SchI GAGTC 2 cut(s) 120, 957
ScrFI CCNGG 4 cut(s) 595, 603, 993, 1005
SduI GDGCHC 1 cut(s) 699
SetI ASST 9 cut(s) 77, 144, 217, 256, 387, 400, 604, 994, 1009
SexAI ACCWGGT 2 cut(s) 601, 991
SfaNI GCATC 2 cut(s) 194, 702
SfcI CTRYAG 1 cut(s) 216
SinI GGWCC 2 cut(s) 605, 995
SmlI CTYRAG 2 cut(s) 31, 70
SmoI CTYRAG 2 cut(s) 31, 70
Sse9I AATT 4 cut(s) 191, 481, 630, 978
SseBI AGGCCT 1 cut(s) 37
SsiI CCGC 1 cut(s) 781
SspI AATATT 3 cut(s) 171, 419, 1072
SspMI CTAG 1 cut(s) 1091
StuI AGGCCT 1 cut(s) 37
StyD4I CCNGG 4 cut(s) 593, 601, 991, 1003
StyI CCWWGG 1 cut(s) 142
TaaI ACNGT 6 cut(s) 110, 466, 559, 737, 814, 848
TaiI ACGT 1 cut(s) 400
TaqI TCGA 1 cut(s) 121
TaqII GACCGA 1 cut(s) 4
TasI AATT 4 cut(s) 191, 481, 630, 978
TatI WGTACW 1 cut(s) 623
TfiI GAWTC 2 cut(s) 452, 516
Tru1I TTAA 2 cut(s) 32, 744
Tru9I TTAA 2 cut(s) 32, 744
TscAI CASTG 2 cut(s) 564, 858
TseFI GTSAC 4 cut(s) 16, 162, 243, 398
TseI GCWGC 2 cut(s) 224, 257
Tsp45I GTSAC 4 cut(s) 16, 162, 243, 398
TspDTI ATGAA 2 cut(s) 305, 395
TspRI CASTG 2 cut(s) 564, 858
Vha464I CTTAAG 1 cut(s) 31
VpaK11BI GGWCC 2 cut(s) 605, 995
XmiI GTMKAC 1 cut(s) 809
XspI CTAG 1 cut(s) 1091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.