Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0004018

Physical Location & Seq

Genomic Coordinates Forward (+)

19955195 .. 19958578

Gene Structure 3384 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G224600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1083 bp

ATGGTGGGGATAATACCCATGGCGTCCTCAATCAGACCCTCGCTATCTACGTTGAGGTTCGCTGGGGCTTCTCGCTTGGGCCTTTCTCTCGCTTCCTTCACTCCTCGGAGACTCGCTTGCTTTCACCTCGCTAGTGCTGTGCCACAGTCACAGTCTTTCGGTCTGAAAGCTTCTAAACTGTTGAGAGGAGATGGTAAAACCATAGGAGTGGCTGCTGGTGGGAATGCCGCGCAAGCAAGCACAACGGCTACCCCGGAAAATGTCCTAGAGTGGGTCAAACAGGACAAGAGGAGGCTGCTCCATGTTGTTTACCGCGTTGGGGATTTGGACAGAACCATAAAATTCTACACAGAGTGCCTGGGAATGAAATTGTTGCGGAAACGTGACATACCAGAGGAAAGATACACCAATGCTTTTCTCGGATACGGGCCAGAGGATTCCCACTTTGTTATTGAACTCACTTACAATTATGGAGTTGACAAGTATGATATTGGAACTGCATTTGGTCATTTTGGTATTGCTGTTGACGATGTTGCCAAGACTGTGGAACTCGTAAAAGCTAAGGGTGGCAAGGTAACACGAGAACCTGGTCCAGTCAAAGGTGGCAATACGGTAATCGCGTTTGTTGAAGATCCCGATGGTTATAAGTTTGAACTTTTGGAAAGAGGGCCTACCCCTGAGCCCTTATGTCAAGTTATGCTTCGTGTGGGTGATCTTGATCGTTCCATAACTTTTTACGAGAAGGCTTTTGGCATGGAGCTTCTTCGCAAAAGAGATAATCCTGAGTACAAGTATACTATAGCAATGCTGGGTTATGGCCCTGAAGACAAAAATGCTGTTCTGGAGTTGACATACAATTATGGGGTCACCGAATACAACAAAGGAAATGCTTATGCTCAGATAGCTGTAGGCACAGATGACGTCTATAAAACTGCTGAAGCAATTAAACTCTGCGGGGGCAAGATTACCCGGGAACCTGGGCCCTTACCTGGTATCAACACAAAGATCACTGCTTGCTTAGACCCTGACGGATGGAAGTCGGTTTTTGTGGACAATGTTGATTTCCTCAAGGAATTGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00620 map00620

Pfam Domains

Protein Families

Glyoxalase

Protein Analysis

361

Amino Acids

39.57

Weight (kDa)

7.57

Isoelectric Point (pI)

30.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67280 AT1G67280
fragaria_vesca	FvH4_1g05730 FvH4_1g05730 FvH4_2g35710 FvH4_2g35710
malus_domestica	MD02G1058400.v1.1 MD15G1094500.v1.1 MD15G1192700.v1.1
prunus_persica	Prupe.1G449600_v2.0.a1 Prupe.1G449600_v2.0.a1 Prupe.1G449600_v2.0.a1 Prupe.1G449600_v2.0.a1 Prupe.7G224600_v2.0.a1 Prupe.7G224600_v2.0.a1
pyrus_communis	pycom15g08730
rosa_chinensis	RchiOBHm_Chr2g0091371 RchiOBHm_Chr6g0306071
rosa_laevigata	RLG00000010826 RLG00000016218
rosa_multiflora	Rmu_sc0025018.1_g000002
rosa_roxburghii	Rroxscaffold_2G00150140 Rroxscaffold_7G00162080
rosa_rugosa	Rorug02G0017000 Rorug06G0346800
rosa_samantha	Rh2BG061200 Rh2CG063300 Rh6AG458900 Rh6BG441900 Rh6CG473400 Rh6DG459700
rosa_wichuraiana	Rw2G004790 Rw6G040010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	645
AatII	GACGTC	1 cut(s)	924
AccI	GTMKAC	1 cut(s)	794
AccII	CGCG	3 cut(s)	230, 315, 620
AciI	CCGC	4 cut(s)	228, 313, 376, 954
AclWI	GGATC	1 cut(s)	626
AcsI	RAATTY	1 cut(s)	341
AcuI	CTGAAG	2 cut(s)	843, 957
AcyI	GRCGYC	2 cut(s)	23, 921
AdeI	CACNNNGTG	1 cut(s)	354
AfaI	GTAC	1 cut(s)	788
AfiI	CCNNNNNNNGG	4 cut(s)	271, 319, 599, 989
AgsI	TTSAA	3 cut(s)	455, 629, 653
AjnI	CCWGG	4 cut(s)	357, 586, 976, 988
AluBI	AGCT	4 cut(s)	170, 560, 760, 905
AluI	AGCT	4 cut(s)	170, 560, 760, 905
Alw26I	GTCTC	1 cut(s)	103
AlwI	GGATC	1 cut(s)	626
Ama87I	CYCGRG	1 cut(s)	969
AoxI	GGCC	5 cut(s)	79, 428, 668, 817, 980
ApaI	GGGCCC	1 cut(s)	984
ApeKI	GCWGC	2 cut(s)	212, 295
ApoI	RAATTY	1 cut(s)	341
AspLEI	GCGC	1 cut(s)	232
AspS9I	GGNCC	7 cut(s)	79, 428, 590, 668, 818, 980, 981
AsuC2I	CCSGG	3 cut(s)	254, 970, 971
AsuHPI	GGTGA	3 cut(s)	116, 722, 859
AvaI	CYCGRG	1 cut(s)	969
AvaII	GGWCC	1 cut(s)	590
BaeGI	GKGCMC	1 cut(s)	984
BanII	GRGCYC	2 cut(s)	684, 984
BauI	CACGAG	1 cut(s)	579
BbsI	GAAGAC	1 cut(s)	831
BbvI	GCAGC	2 cut(s)	199, 282
BccI	CCATC	3 cut(s)	185, 632, 1026
BceAI	ACGGC	1 cut(s)	261
BciT130I	CCWGG	4 cut(s)	359, 588, 978, 990
BciVI	GTATCC	1 cut(s)	416
BcnI	CCSGG	3 cut(s)	254, 970, 971
BcoDI	GTCTC	1 cut(s)	103
BfaI	CTAG	2 cut(s)	132, 266
BfmI	CTRYAG	2 cut(s)	798, 906
BfuI	GTATCC	1 cut(s)	416
BisI	GCNGC	3 cut(s)	213, 228, 296
BlsI	GCNGC	3 cut(s)	214, 229, 297
Bme1390I	CCNGG	7 cut(s)	254, 359, 588, 970, 971, 978, 990
Bme18I	GGWCC	1 cut(s)	590
BmeT110I	CYCGRG	1 cut(s)	969
BmgT120I	GGNCC	7 cut(s)	79, 428, 590, 668, 818, 980, 981
BmiI	GGNNCC	2 cut(s)	975, 982
BmrFI	CCNGG	7 cut(s)	254, 359, 588, 970, 971, 978, 990
BpiI	GAAGAC	1 cut(s)	831
BpmI	CTGGAG	1 cut(s)	863
Bpu10I	CCTNAGC	2 cut(s)	561, 678
BpuEI	CTTGAG	1 cut(s)	1052
BpuMI	CCSGG	3 cut(s)	254, 970, 971
BsaBI	GATNNNNATC	1 cut(s)	717
BsaHI	GRCGYC	2 cut(s)	23, 921
BsaJI	CCNNGG	6 cut(s)	18, 104, 252, 358, 969, 977
Bsc4I	CCNNNNNNNGG	4 cut(s)	271, 319, 599, 989
Bse1I	ACTGG	1 cut(s)	593
Bse3DI	GCAATG	1 cut(s)	810
Bse8I	GATNNNNATC	1 cut(s)	717
BseBI	CCWGG	4 cut(s)	359, 588, 978, 990
BseDI	CCNNGG	6 cut(s)	18, 104, 252, 358, 969, 977
BseGI	GGATG	1 cut(s)	1037
BseJI	GATNNNNATC	1 cut(s)	717
BseLI	CCNNNNNNNGG	4 cut(s)	271, 319, 599, 989
BseMI	GCAATG	1 cut(s)	810
BseMII	CTCAG	3 cut(s)	669, 774, 911
BseNI	ACTGG	1 cut(s)	593
BseRI	GAGGAG	3 cut(s)	93, 201, 304
BseSI	GKGCMC	1 cut(s)	984
BseXI	GCAGC	2 cut(s)	199, 282
BseYI	CCCAGC	2 cut(s)	62, 808
Bsh1236I	CGCG	3 cut(s)	230, 315, 620
BshFI	GGCC	5 cut(s)	81, 430, 670, 819, 982
BsiHKCI	CYCGRG	1 cut(s)	969
BsiSI	CCGG	2 cut(s)	254, 970
BslI	CCNNNNNNNGG	4 cut(s)	271, 319, 599, 989
BsmAI	GTCTC	1 cut(s)	103
BsmI	GAATGC	1 cut(s)	229
BsnI	GGCC	5 cut(s)	81, 430, 670, 819, 982
BsoBI	CYCGRG	1 cut(s)	969
Bsp120I	GGGCCC	1 cut(s)	980
Bsp1286I	GDGCHC	2 cut(s)	684, 984
Bsp143I	GATC	4 cut(s)	631, 712, 718, 1005
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	4 cut(s)	228, 313, 376, 954
BspANI	GGCC	5 cut(s)	81, 430, 670, 819, 982
BspCNI	CTCAG	3 cut(s)	670, 775, 910
BspFNI	CGCG	3 cut(s)	230, 315, 620
BspLI	GGNNCC	2 cut(s)	975, 982
BspPI	GGATC	1 cut(s)	626
BsrDI	GCAATG	1 cut(s)	810
BsrI	ACTGG	1 cut(s)	593
BssECI	CCNNGG	6 cut(s)	18, 104, 252, 358, 969, 977
BssMI	GATC	4 cut(s)	631, 712, 718, 1005
BssNAI	GTATAC	1 cut(s)	795
BssNI	GRCGYC	2 cut(s)	23, 921
BssSI	CACGAG	1 cut(s)	579
BssT1I	CCWWGG	1 cut(s)	18
Bst1107I	GTATAC	1 cut(s)	795
Bst2BI	CACGAG	1 cut(s)	579
Bst2UI	CCWGG	4 cut(s)	359, 588, 978, 990
Bst4CI	ACNGT	5 cut(s)	147, 153, 180, 544, 613
BstACI	GRCGYC	2 cut(s)	23, 921
BstC8I	GCNNGC	4 cut(s)	118, 234, 238, 1015
BstDEI	CTNAG	5 cut(s)	561, 678, 783, 897, 1018
BstDSI	CCRYGG	1 cut(s)	18
BstEII	GGTNACC	1 cut(s)	865
BstF5I	GGATG	1 cut(s)	1037
BstFNI	CGCG	3 cut(s)	230, 315, 620
BstHHI	GCGC	1 cut(s)	232
BstKTI	GATC	4 cut(s)	634, 715, 721, 1008
BstMAI	GTCTC	1 cut(s)	103
BstMBI	GATC	4 cut(s)	631, 712, 718, 1005
BstMWI	GCNNNNNNNGC	2 cut(s)	233, 902
BstNI	CCWGG	4 cut(s)	359, 588, 978, 990
BstPI	GGTNACC	1 cut(s)	865
BstSCI	CCNGG	7 cut(s)	252, 357, 586, 968, 969, 976, 988
BstSFI	CTRYAG	2 cut(s)	798, 906
BstSLI	GKGCMC	1 cut(s)	984
BstUI	CGCG	3 cut(s)	230, 315, 620
BstV1I	GCAGC	2 cut(s)	199, 282
BstV2I	GAAGAC	1 cut(s)	831
BstX2I	RGATCY	1 cut(s)	631
BstXI	CCANNNNNNTGG	2 cut(s)	208, 544
BstYI	RGATCY	1 cut(s)	631
BstZ17I	GTATAC	1 cut(s)	795
BsuI	GTATCC	1 cut(s)	416
BsuRI	GGCC	5 cut(s)	81, 430, 670, 819, 982
BtgI	CCRYGG	1 cut(s)	18
BtsCI	GGATG	1 cut(s)	1037
BtsI	GCAGTG	1 cut(s)	1008
BtsIMutI	CAGTG	1 cut(s)	1008
Cac8I	GCNNGC	4 cut(s)	118, 234, 238, 1015
CfoI	GCGC	1 cut(s)	232
Cfr13I	GGNCC	7 cut(s)	79, 428, 590, 668, 818, 980, 981
Cfr9I	CCCGGG	1 cut(s)	969
CseI	GACGC	1 cut(s)	12
CsiI	ACCWGGT	2 cut(s)	586, 988
Csp6I	GTAC	1 cut(s)	787
CviAII	CATG	3 cut(s)	19, 302, 754
CviQI	GTAC	1 cut(s)	787
DdeI	CTNAG	5 cut(s)	561, 678, 783, 897, 1018
DpnI	GATC	4 cut(s)	633, 714, 720, 1007
DpnII	GATC	4 cut(s)	631, 712, 718, 1005
DraIII	CACNNNGTG	1 cut(s)	354
Eco130I	CCWWGG	1 cut(s)	18
Eco24I	GRGCYC	2 cut(s)	684, 984
Eco47I	GGWCC	1 cut(s)	590
Eco57I	CTGAAG	2 cut(s)	843, 957
Eco88I	CYCGRG	1 cut(s)	969
Eco91I	GGTNACC	1 cut(s)	865
EcoO109I	RGGNCCY	2 cut(s)	668, 981
EcoO65I	GGTNACC	1 cut(s)	865
EcoRII	CCWGG	4 cut(s)	357, 586, 976, 988
EcoT14I	CCWWGG	1 cut(s)	18
EcoT38I	GRGCYC	2 cut(s)	684, 984
ErhI	CCWWGG	1 cut(s)	18
FaeI	CATG	3 cut(s)	22, 305, 757
FalI	AAGNNNNNCTT	2 cut(s)	684, 716
FatI	CATG	3 cut(s)	18, 301, 753
FauI	CCCGC	1 cut(s)	947
FblI	GTMKAC	1 cut(s)	794
Fnu4HI	GCNGC	3 cut(s)	213, 228, 296
FokI	GGATG	1 cut(s)	1044
FriOI	GRGCYC	2 cut(s)	684, 984
Fsp4HI	GCNGC	3 cut(s)	213, 228, 296
FspBI	CTAG	2 cut(s)	132, 266
GlaI	GCGC	1 cut(s)	231
GluI	GCNGC	3 cut(s)	213, 228, 296
GsaI	CCCAGC	2 cut(s)	66, 812
GsuI	CTGGAG	1 cut(s)	863
HaeIII	GGCC	5 cut(s)	81, 430, 670, 819, 982
HapII	CCGG	2 cut(s)	254, 970
HgaI	GACGC	1 cut(s)	12
HhaI	GCGC	1 cut(s)	232
Hin1I	GRCGYC	2 cut(s)	23, 921
Hin1II	CATG	3 cut(s)	22, 305, 757
Hin6I	GCGC	1 cut(s)	230
HinP1I	GCGC	1 cut(s)	230
HincII	GTYRAC	3 cut(s)	478, 526, 849
HindII	GTYRAC	3 cut(s)	478, 526, 849
HindIII	AAGCTT	1 cut(s)	168
HinfI	GANTC	2 cut(s)	111, 437
HpaII	CCGG	2 cut(s)	254, 970
HphI	GGTGA	3 cut(s)	116, 722, 859
Hpy166II	GTNNAC	6 cut(s)	310, 478, 526, 795, 849, 1051
Hpy188I	TCNGA	5 cut(s)	35, 108, 165, 422, 900
Hpy188III	TCNNGA	4 cut(s)	635, 716, 782, 842
Hpy8I	GTNNAC	6 cut(s)	310, 478, 526, 795, 849, 1051
HpyAV	CCTTC	2 cut(s)	106, 736
HpyCH4III	ACNGT	5 cut(s)	147, 153, 180, 544, 613
HpyCH4IV	ACGT	3 cut(s)	50, 382, 921
HpyCH4V	TGCA	1 cut(s)	500
HpyF10VI	GCNNNNNNNGC	2 cut(s)	233, 902
HpyF3I	CTNAG	5 cut(s)	561, 678, 783, 897, 1018
HpySE526I	ACGT	3 cut(s)	50, 382, 921
Hsp92I	GRCGYC	2 cut(s)	23, 921
Hsp92II	CATG	3 cut(s)	22, 305, 757
HspAI	GCGC	1 cut(s)	230
Kzo9I	GATC	4 cut(s)	631, 712, 718, 1005
LmnI	GCTCC	2 cut(s)	303, 757
Lsp1109I	GCAGC	2 cut(s)	199, 282
MabI	ACCWGGT	2 cut(s)	586, 988
MaeI	CTAG	2 cut(s)	132, 266
MaeII	ACGT	3 cut(s)	50, 382, 921
MaeIII	GTNAC	4 cut(s)	147, 383, 574, 865
MalI	GATC	4 cut(s)	633, 714, 720, 1007
MboI	GATC	4 cut(s)	631, 712, 718, 1005
MboII	GAAGA	3 cut(s)	641, 755, 836
MflI	RGATCY	1 cut(s)	631
MhlI	GDGCHC	2 cut(s)	684, 984
MluCI	AATT	6 cut(s)	341, 368, 466, 856, 942, 1073
MlyI	GAGTC	1 cut(s)	105
MseI	TTAA	1 cut(s)	945
MslI	CAYNNNNRTG	1 cut(s)	206
MspI	CCGG	2 cut(s)	254, 970
MspR9I	CCNGG	7 cut(s)	254, 359, 588, 970, 971, 978, 990
Mva1269I	GAATGC	1 cut(s)	229
MvaI	CCWGG	4 cut(s)	359, 588, 978, 990
MvnI	CGCG	3 cut(s)	230, 315, 620
MwoI	GCNNNNNNNGC	2 cut(s)	233, 902
NciI	CCSGG	3 cut(s)	254, 970, 971
NcoI	CCATGG	1 cut(s)	18
NdeII	GATC	4 cut(s)	631, 712, 718, 1005
NlaIII	CATG	3 cut(s)	22, 305, 757
NlaIV	GGNNCC	2 cut(s)	975, 982
NmuCI	GTSAC	3 cut(s)	147, 383, 865
PcsI	WCGNNNNNNNCGW	2 cut(s)	47, 617
PctI	GAATGC	1 cut(s)	229
PfeI	GAWTC	1 cut(s)	437
PkrI	GCNGC	3 cut(s)	214, 229, 297
PleI	GAGTC	1 cut(s)	105
PpsI	GAGTC	1 cut(s)	105
PsiI	TTATAA	1 cut(s)	645
Psp6I	CCWGG	4 cut(s)	357, 586, 976, 988
PspEI	GGTNACC	1 cut(s)	865
PspFI	CCCAGC	2 cut(s)	62, 808
PspGI	CCWGG	4 cut(s)	357, 586, 976, 988
PspN4I	GGNNCC	2 cut(s)	975, 982
PspOMI	GGGCCC	1 cut(s)	980
PspPI	GGNCC	7 cut(s)	79, 428, 590, 668, 818, 980, 981
PsuI	RGATCY	1 cut(s)	631
RsaI	GTAC	1 cut(s)	788
RsaNI	GTAC	1 cut(s)	787
RseI	CAYNNNNRTG	1 cut(s)	206
SaqAI	TTAA	1 cut(s)	945
SatI	GCNGC	3 cut(s)	213, 228, 296
Sau3AI	GATC	4 cut(s)	631, 712, 718, 1005
Sau96I	GGNCC	7 cut(s)	79, 428, 590, 668, 818, 980, 981
SchI	GAGTC	1 cut(s)	105
ScrFI	CCNGG	7 cut(s)	254, 359, 588, 970, 971, 978, 990
SduI	GDGCHC	2 cut(s)	684, 984
SexAI	ACCWGGT	2 cut(s)	586, 988
SfcI	CTRYAG	2 cut(s)	798, 906
SinI	GGWCC	1 cut(s)	590
SmaI	CCCGGG	1 cut(s)	971
SmiMI	CAYNNNNRTG	1 cut(s)	206
SmlI	CTYRAG	1 cut(s)	1067
SmoI	CTYRAG	1 cut(s)	1067
Sse9I	AATT	6 cut(s)	341, 368, 466, 856, 942, 1073
SsiI	CCGC	4 cut(s)	228, 313, 376, 954
SspMI	CTAG	2 cut(s)	132, 266
StyD4I	CCNGG	7 cut(s)	252, 357, 586, 968, 969, 976, 988
StyI	CCWWGG	1 cut(s)	18
TaaI	ACNGT	5 cut(s)	147, 153, 180, 544, 613
TaiI	ACGT	3 cut(s)	53, 385, 924
TaqII	GACCGA	1 cut(s)	149
TasI	AATT	6 cut(s)	341, 368, 466, 856, 942, 1073
TatI	WGTACW	1 cut(s)	786
TauI	GCSGC	1 cut(s)	230
TfiI	GAWTC	1 cut(s)	437
Tru1I	TTAA	1 cut(s)	945
Tru9I	TTAA	1 cut(s)	945
TscAI	CASTG	1 cut(s)	1015
TseFI	GTSAC	3 cut(s)	147, 383, 865
TseI	GCWGC	2 cut(s)	212, 295
Tsp45I	GTSAC	3 cut(s)	147, 383, 865
TspDTI	ATGAA	1 cut(s)	380
TspGWI	ACGGA	1 cut(s)	1044
TspMI	CCCGGG	1 cut(s)	969
TspRI	CASTG	1 cut(s)	1015
VpaK11BI	GGWCC	1 cut(s)	590
XapI	RAATTY	1 cut(s)	341
XmaI	CCCGGG	1 cut(s)	969
XmiI	GTMKAC	1 cut(s)	794
XspI	CTAG	2 cut(s)	132, 266
ZraI	GACGTC	1 cut(s)	922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.