FvH4_3g04781

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
2743861 .. 2756164
12304 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g04781.t1

Sequence Viewer

Length: 942 bp
ATGGACCAGATGCAGCACAAGTATGTAACAGTCCAAGGCCTGAAGCTCCACGTCGCCGACATCGGAACAGGTCCAAACGTGGTCGTGTTCCTGCATGGCTTCCCGGAGATATGGTACTCCTGGCGCCACCAGATGATCGCCGTAGCCAACGCCGGGTTCCGGGCCATCGCGCCCGACTACCGCGGTTACGGACTCTCTGACCCTCCACCCGAACCCGAGAAGACCTCCTCCAGTGACCTCATCAATGACCTCCTTGGAATTCTTGATGCTCTGGCTGTTCCTAAGGTTTTCCTTGTCGGAAAAGATTTTGGAGCTCGGCCGGCATACTTGTTCGCCCTTCTGCACCCAGAAAAGGTGTTGGGAGTTGTAACAATAGGACTTCCATACAGGCCACCATCAACTCGTTCCCCATATGATAAAGATCTCCCTGAAGGTTTCTACATCAACAGATGGCGGGAACCTGGCAGGGCTGAAGCTGATTTTGGACGCTTTGATGCAAAAACAGTTGTTCGAAATGTTTACATCCTTTTCTCAAGAAGTGAACTACCAATAGCTGCCAAGAACCAGGAGATCATGGACTTGGTGGACTCGTCTACACCTCTTCCCCCTTGGTTTACCGAGGAAGATCTTGAAGTGTATGGAAAGTTGTATGAAAAATCAGGTTTCCGAACTGCCTTGCAAATGCCTTATAGGAAATCCATAGATGACTTGGCGGGTGCAACCGACTCAATCGTTAGAGTTCCGGTGTTGTTTATAATGGGAAACGAGGATTATGTGTTGAAATTTCCAGGGTTAGAACATTACATAAACATTGGAAAGTTGAAAGAGTTTGTCCCTGATTTGGAGATTGTATCTCTGCCCGAAGGCACACACTTTGTTCAAGAACAATCACCTGAACAGATTAATGAGCTCATCCTCACATTTCTCCAAAAGCACATTTGA

Protein Analysis

314

Amino Acids

35.36

Weight (kDa)

5.33

Isoelectric Point (pI)

48.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 26 - 296 1.5e-27 alpha/beta hydrolase fold
Hydrolase_4 PF12146 27 - 126 4.5e-08 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 28 - 303 2.3e-14 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 755
AccB1I GGYRCC 1 cut(s) 123
AccI GTMKAC 1 cut(s) 593
AccII CGCG 2 cut(s) 170, 183
AciI CCGC 4 cut(s) 181, 183, 454, 713
AcoI YGGCCR 1 cut(s) 317
AcsI RAATTY 2 cut(s) 258, 782
AcuI CTGAAG 3 cut(s) 62, 450, 492
AcyI GRCGYC 1 cut(s) 124
AfaI GTAC 1 cut(s) 116
AfiI CCNNNNNNNGG 4 cut(s) 153, 159, 352, 841
AgsI TTSAA 4 cut(s) 632, 781, 823, 881
AjiI CACGTC 1 cut(s) 52
AjnI CCWGG 4 cut(s) 119, 460, 564, 787
AjuI GAANNNNNNNTTGG 4 cut(s) 140, 172, 465, 497
AluBI AGCT 5 cut(s) 46, 314, 476, 554, 910
AluI AGCT 5 cut(s) 46, 314, 476, 554, 910
Alw21I GWGCWC 2 cut(s) 316, 912
Ama87I CYCGRG 1 cut(s) 215
AoxI GGCC 4 cut(s) 37, 162, 317, 389
ApeKI GCWGC 2 cut(s) 13, 554
ApoI RAATTY 2 cut(s) 258, 782
AseI ATTAAT 1 cut(s) 903
AspLEI GCGC 2 cut(s) 126, 172
AspS9I GGNCC 3 cut(s) 4, 71, 162
AsuC2I CCSGG 3 cut(s) 104, 154, 161
AsuHPI GGTGA 1 cut(s) 882
AsuII TTCGAA 1 cut(s) 511
AvaI CYCGRG 1 cut(s) 215
AvaII GGWCC 2 cut(s) 4, 71
AxyI CCTNAGG 1 cut(s) 282
BanI GGYRCC 1 cut(s) 123
BanII GRGCYC 2 cut(s) 316, 912
BbsI GAAGAC 1 cut(s) 227
Bbv12I GWGCWC 2 cut(s) 316, 912
BbvI GCAGC 2 cut(s) 25, 541
BccI CCATC 3 cut(s) 173, 403, 444
BceAI ACGGC 1 cut(s) 125
BciT130I CCWGG 4 cut(s) 121, 462, 566, 789
BcnI CCSGG 3 cut(s) 104, 154, 161
BfoI RGCGCY 1 cut(s) 127
BglII AGATCT 2 cut(s) 421, 625
BisI GCNGC 2 cut(s) 14, 555
BlsI GCNGC 2 cut(s) 15, 556
Bme1390I CCNGG 7 cut(s) 104, 121, 154, 161, 462, 566, 789
Bme18I GGWCC 2 cut(s) 4, 71
BmeT110I CYCGRG 1 cut(s) 215
BmgBI CACGTC 1 cut(s) 52
BmgT120I GGNCC 3 cut(s) 4, 71, 162
BmiI GGNNCC 3 cut(s) 125, 158, 459
BmrFI CCNGG 7 cut(s) 104, 121, 154, 161, 462, 566, 789
BmsI GCATC 2 cut(s) 256, 484
BpiI GAAGAC 1 cut(s) 227
BplI GAGNNNNNCTC 2 cut(s) 209, 241
BpmI CTGGAG 1 cut(s) 214
Bpu14I TTCGAA 1 cut(s) 511
BpuEI CTTGAG 1 cut(s) 517
BpuMI CCSGG 3 cut(s) 104, 154, 161
BsaBI GATNNNNATC 1 cut(s) 420
BsaHI GRCGYC 1 cut(s) 124
BsaJI CCNNGG 6 cut(s) 34, 181, 253, 608, 618, 788
BsaWI WCCGGW 1 cut(s) 742
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bsc4I CCNNNNNNNGG 4 cut(s) 153, 159, 352, 841
Bse118I RCCGGY 1 cut(s) 319
Bse1I ACTGG 1 cut(s) 231
Bse21I CCTNAGG 1 cut(s) 282
Bse8I GATNNNNATC 1 cut(s) 420
BseBI CCWGG 4 cut(s) 121, 462, 566, 789
BseDI CCNNGG 6 cut(s) 34, 181, 253, 608, 618, 788
BseGI GGATG 2 cut(s) 522, 912
BseJI GATNNNNATC 1 cut(s) 420
BseLI CCNNNNNNNGG 4 cut(s) 153, 159, 352, 841
BseNI ACTGG 1 cut(s) 231
BseRI GAGGAG 1 cut(s) 217
BseX3I CGGCCG 1 cut(s) 317
BseXI GCAGC 2 cut(s) 25, 541
BsgI GTGCAG 1 cut(s) 326
Bsh1236I CGCG 2 cut(s) 170, 183
Bsh1285I CGRYCG 1 cut(s) 320
BshFI GGCC 4 cut(s) 39, 164, 319, 391
BshNI GGYRCC 1 cut(s) 123
BsiEI CGRYCG 1 cut(s) 320
BsiHKAI GWGCWC 2 cut(s) 316, 912
BsiHKCI CYCGRG 1 cut(s) 215
BsiSI CCGG 5 cut(s) 104, 153, 160, 320, 743
BslFI GGGAC 1 cut(s) 818
BslI CCNNNNNNNGG 4 cut(s) 153, 159, 352, 841
BsmFI GGGAC 1 cut(s) 818
BsnI GGCC 4 cut(s) 39, 164, 319, 391
BsoBI CYCGRG 1 cut(s) 215
Bsp119I TTCGAA 1 cut(s) 511
Bsp1286I GDGCHC 2 cut(s) 316, 912
Bsp143I GATC 4 cut(s) 135, 421, 570, 625
BspACI CCGC 4 cut(s) 181, 183, 454, 713
BspANI GGCC 4 cut(s) 39, 164, 319, 391
BspFNI CGCG 2 cut(s) 170, 183
BspLI GGNNCC 3 cut(s) 125, 158, 459
BspT104I TTCGAA 1 cut(s) 511
BspT107I GGYRCC 1 cut(s) 123
BsrFI RCCGGY 1 cut(s) 319
BsrI ACTGG 1 cut(s) 231
BssAI RCCGGY 1 cut(s) 319
BssECI CCNNGG 6 cut(s) 34, 181, 253, 608, 618, 788
BssMI GATC 4 cut(s) 135, 421, 570, 625
BssNI GRCGYC 1 cut(s) 124
BssT1I CCWWGG 3 cut(s) 34, 253, 608
Bst2UI CCWGG 4 cut(s) 121, 462, 566, 789
Bst4CI ACNGT 2 cut(s) 31, 505
Bst6I CTCTTC 1 cut(s) 606
BstACI GRCGYC 1 cut(s) 124
BstBI TTCGAA 1 cut(s) 511
BstC8I GCNNGC 1 cut(s) 321
BstDEI CTNAG 1 cut(s) 282
BstDSI CCRYGG 1 cut(s) 181
BstF5I GGATG 2 cut(s) 522, 912
BstFNI CGCG 2 cut(s) 170, 183
BstH2I RGCGCY 1 cut(s) 127
BstHHI GCGC 2 cut(s) 126, 172
BstKTI GATC 4 cut(s) 138, 424, 573, 628
BstMBI GATC 4 cut(s) 135, 421, 570, 625
BstMCI CGRYCG 1 cut(s) 320
BstMWI GCNNNNNNNGC 1 cut(s) 320
BstNI CCWGG 4 cut(s) 121, 462, 566, 789
BstSCI CCNGG 7 cut(s) 102, 119, 152, 159, 460, 564, 787
BstUI CGCG 2 cut(s) 170, 183
BstV1I GCAGC 2 cut(s) 25, 541
BstV2I GAAGAC 1 cut(s) 227
BstX2I RGATCY 2 cut(s) 421, 625
BstYI RGATCY 2 cut(s) 421, 625
BstZI CGGCCG 1 cut(s) 317
Bsu36I CCTNAGG 1 cut(s) 282
BsuRI GGCC 4 cut(s) 39, 164, 319, 391
BtgI CCRYGG 1 cut(s) 181
BtgZI GCGATG 1 cut(s) 151
BtrI CACGTC 1 cut(s) 52
BtsCI GGATG 2 cut(s) 522, 912
BtsIMutI CAGTG 1 cut(s) 238
Cac8I GCNNGC 1 cut(s) 321
CfoI GCGC 2 cut(s) 126, 172
Cfr10I RCCGGY 1 cut(s) 319
Cfr13I GGNCC 3 cut(s) 4, 71, 162
Cfr42I CCGCGG 1 cut(s) 184
CseI GACGC 1 cut(s) 495
Csp6I GTAC 1 cut(s) 115
CviAII CATG 2 cut(s) 95, 574
CviQI GTAC 1 cut(s) 115
DdeI CTNAG 1 cut(s) 282
DinI GGCGCC 1 cut(s) 125
DpnI GATC 4 cut(s) 137, 423, 572, 627
DpnII GATC 4 cut(s) 135, 421, 570, 625
EaeI YGGCCR 1 cut(s) 317
EagI CGGCCG 1 cut(s) 317
Eam1104I CTCTTC 1 cut(s) 606
EarI CTCTTC 1 cut(s) 606
Ecl136II GAGCTC 2 cut(s) 314, 910
EclXI CGGCCG 1 cut(s) 317
Eco130I CCWWGG 3 cut(s) 34, 253, 608
Eco147I AGGCCT 1 cut(s) 39
Eco24I GRGCYC 2 cut(s) 316, 912
Eco47I GGWCC 2 cut(s) 4, 71
Eco52I CGGCCG 1 cut(s) 317
Eco53kI GAGCTC 2 cut(s) 314, 910
Eco57I CTGAAG 3 cut(s) 62, 450, 492
Eco81I CCTNAGG 1 cut(s) 282
Eco88I CYCGRG 1 cut(s) 215
EcoICRI GAGCTC 2 cut(s) 314, 910
EcoRI GAATTC 1 cut(s) 258
EcoRII CCWGG 4 cut(s) 119, 460, 564, 787
EcoT14I CCWWGG 3 cut(s) 34, 253, 608
EcoT38I GRGCYC 2 cut(s) 316, 912
EgeI GGCGCC 1 cut(s) 125
EheI GGCGCC 1 cut(s) 125
ErhI CCWWGG 3 cut(s) 34, 253, 608
FaeI CATG 2 cut(s) 98, 577
FaqI GGGAC 1 cut(s) 818
FatI CATG 2 cut(s) 94, 573
FauI CCCGC 2 cut(s) 447, 706
FauNDI CATATG 1 cut(s) 412
FblI GTMKAC 1 cut(s) 593
Fnu4HI GCNGC 2 cut(s) 14, 555
FokI GGATG 2 cut(s) 509, 899
FriOI GRGCYC 2 cut(s) 316, 912
Fsp4HI GCNGC 2 cut(s) 14, 555
GlaI GCGC 2 cut(s) 125, 171
GluI GCNGC 2 cut(s) 14, 555
GsuI CTGGAG 1 cut(s) 214
HaeII RGCGCY 1 cut(s) 127
HaeIII GGCC 4 cut(s) 39, 164, 319, 391
HapII CCGG 5 cut(s) 104, 153, 160, 320, 743
HgaI GACGC 1 cut(s) 495
HhaI GCGC 2 cut(s) 126, 172
Hin1I GRCGYC 1 cut(s) 124
Hin1II CATG 2 cut(s) 98, 577
Hin6I GCGC 2 cut(s) 124, 170
HinP1I GCGC 2 cut(s) 124, 170
HinfI GANTC 3 cut(s) 192, 587, 725
HpaII CCGG 5 cut(s) 104, 153, 160, 320, 743
HphI GGTGA 1 cut(s) 882
Hpy166II GTNNAC 5 cut(s) 520, 542, 586, 594, 615
Hpy188I TCNGA 4 cut(s) 65, 199, 299, 668
Hpy188III TCNNGA 4 cut(s) 263, 534, 629, 881
Hpy8I GTNNAC 5 cut(s) 520, 542, 586, 594, 615
Hpy99I CGWCG 1 cut(s) 56
HpyAV CCTTC 3 cut(s) 347, 425, 857
HpyCH4III ACNGT 2 cut(s) 31, 505
HpyCH4IV ACGT 2 cut(s) 51, 78
HpyCH4V TGCA 6 cut(s) 13, 94, 343, 497, 679, 719
HpyF10VI GCNNNNNNNGC 1 cut(s) 320
HpyF3I CTNAG 1 cut(s) 282
HpySE526I ACGT 2 cut(s) 51, 78
Hsp92I GRCGYC 1 cut(s) 124
Hsp92II CATG 2 cut(s) 98, 577
HspAI GCGC 2 cut(s) 124, 170
KasI GGCGCC 1 cut(s) 123
KroI GCCGGC 1 cut(s) 319
KroNI GCCGGC 1 cut(s) 321
KspI CCGCGG 1 cut(s) 184
Kzo9I GATC 4 cut(s) 135, 421, 570, 625
LmnI GCTCC 2 cut(s) 51, 311
Lsp1109I GCAGC 2 cut(s) 25, 541
LweI GCATC 2 cut(s) 256, 484
MaeII ACGT 2 cut(s) 51, 78
MaeIII GTNAC 4 cut(s) 25, 185, 233, 367
MalI GATC 4 cut(s) 137, 423, 572, 627
MboI GATC 4 cut(s) 135, 421, 570, 625
MboII GAAGA 3 cut(s) 232, 593, 635
MflI RGATCY 2 cut(s) 421, 625
MhlI GDGCHC 2 cut(s) 316, 912
MluCI AATT 2 cut(s) 258, 782
Mly113I GGCGCC 1 cut(s) 124
MlyI GAGTC 3 cut(s) 186, 581, 719
MmeI TCCRAC 1 cut(s) 277
MnlI CCTC 9 cut(s) 213, 235, 238, 248, 260, 609, 613, 760, 926
MroNI GCCGGC 1 cut(s) 319
MseI TTAA 1 cut(s) 903
MslI CAYNNNNRTG 1 cut(s) 21
MspA1I CMGCKG 1 cut(s) 183
MspI CCGG 5 cut(s) 104, 153, 160, 320, 743
MspR9I CCNGG 7 cut(s) 104, 121, 154, 161, 462, 566, 789
MvaI CCWGG 4 cut(s) 121, 462, 566, 789
MvnI CGCG 2 cut(s) 170, 183
MwoI GCNNNNNNNGC 1 cut(s) 320
NaeI GCCGGC 1 cut(s) 321
NarI GGCGCC 1 cut(s) 124
NciI CCSGG 3 cut(s) 104, 154, 161
NdeI CATATG 1 cut(s) 412
NdeII GATC 4 cut(s) 135, 421, 570, 625
NgoMIV GCCGGC 1 cut(s) 319
NlaIII CATG 2 cut(s) 98, 577
NlaIV GGNNCC 3 cut(s) 125, 158, 459
NmeAIII GCCGAG 1 cut(s) 295
NmuCI GTSAC 1 cut(s) 233
NspV TTCGAA 1 cut(s) 511
PceI AGGCCT 1 cut(s) 39
PdiI GCCGGC 1 cut(s) 321
PfoI TCCNGGA 1 cut(s) 102
PkrI GCNGC 2 cut(s) 15, 556
PleI GAGTC 3 cut(s) 186, 581, 719
PluTI GGCGCC 1 cut(s) 127
PpsI GAGTC 3 cut(s) 186, 581, 719
PshBI ATTAAT 1 cut(s) 903
PsiI TTATAA 1 cut(s) 755
Psp124BI GAGCTC 2 cut(s) 316, 912
Psp6I CCWGG 4 cut(s) 119, 460, 564, 787
PspGI CCWGG 4 cut(s) 119, 460, 564, 787
PspN4I GGNNCC 3 cut(s) 125, 158, 459
PspPI GGNCC 3 cut(s) 4, 71, 162
PsuI RGATCY 2 cut(s) 421, 625
RsaI GTAC 1 cut(s) 116
RsaNI GTAC 1 cut(s) 115
RseI CAYNNNNRTG 1 cut(s) 21
SacI GAGCTC 2 cut(s) 316, 912
SacII CCGCGG 1 cut(s) 184
SaqAI TTAA 1 cut(s) 903
SatI GCNGC 2 cut(s) 14, 555
Sau3AI GATC 4 cut(s) 135, 421, 570, 625
Sau96I GGNCC 3 cut(s) 4, 71, 162
SchI GAGTC 3 cut(s) 186, 581, 719
ScrFI CCNGG 7 cut(s) 104, 121, 154, 161, 462, 566, 789
SduI GDGCHC 2 cut(s) 316, 912
SfaNI GCATC 2 cut(s) 256, 484
SfoI GGCGCC 1 cut(s) 125
Sfr303I CCGCGG 1 cut(s) 184
SfuI TTCGAA 1 cut(s) 511
SgrBI CCGCGG 1 cut(s) 184
SinI GGWCC 2 cut(s) 4, 71
SmiMI CAYNNNNRTG 1 cut(s) 21
SmlI CTYRAG 1 cut(s) 532
SmoI CTYRAG 1 cut(s) 532
Sse9I AATT 2 cut(s) 258, 782
SseBI AGGCCT 1 cut(s) 39
SsiI CCGC 4 cut(s) 181, 183, 454, 713
SspDI GGCGCC 1 cut(s) 123
SstI GAGCTC 2 cut(s) 316, 912
StuI AGGCCT 1 cut(s) 39
StyD4I CCNGG 7 cut(s) 102, 119, 152, 159, 460, 564, 787
StyI CCWWGG 3 cut(s) 34, 253, 608
TaaI ACNGT 2 cut(s) 31, 505
TaiI ACGT 2 cut(s) 54, 81
TaqI TCGA 1 cut(s) 511
TasI AATT 2 cut(s) 258, 782
Tru1I TTAA 1 cut(s) 903
Tru9I TTAA 1 cut(s) 903
TscAI CASTG 1 cut(s) 238
TseFI GTSAC 1 cut(s) 233
TseI GCWGC 2 cut(s) 13, 554
Tsp45I GTSAC 1 cut(s) 233
TspDTI ATGAA 1 cut(s) 666
TspGWI ACGGA 1 cut(s) 204
TspRI CASTG 1 cut(s) 238
VpaK11BI GGWCC 2 cut(s) 4, 71
VspI ATTAAT 1 cut(s) 903
XapI RAATTY 2 cut(s) 258, 782
XcmI CCANNNNNNNNNTGG 1 cut(s) 706
XmiI GTMKAC 1 cut(s) 593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.