RchiOBHm_Chr5g0007871

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
5018143 .. 5020210
2068 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28889

Sequence Viewer

Length: 942 bp
ATGGATCAAATCCAGCACAAGTACATAACCGTACAAGGCCTGAAGCTACACGTGGCCGACATCGGAACAGGTCCCAATGTGGTCGTGTTCCTCCATGGATTCCCAGAAATATGGTACACGTGGCGCCACCAGATGATCGCTCTGGCCAACGCCGGGTTCCGGGCCATAGCCCCGGACTATCGCGGATACGGACTCTCCGACCCGCCTCCCCAACCCGAGAAGGCCACCTTCCTTGACCTTGACAATGACCTCCTTGCTATTCTTGATGCCCTTGCCATTCCTAAGGTTTTCCTCATCGGAAAAGATTTTGGAGCTTGGCCGGCGTACATATTTGCCTGTCTGCACCCAGAAAGGACCTTGGGAGTTGTAACAATGGGAGTGCCATACATGCCAAAGTCAAGTAGTCCCCAGTTCATTAAGCACCTTCCTGAAGGTTTCTATATTTCAAGATGGCAGGAACCAGGTGGCAGGGCAGAAGCTGATTTTGGACGCCTTGATGCGAAAACAGTTATCCGCAATGTGTACATTCTTTTCTCGAGGAGTGAAATACCAATAGCTGCAGAAAACCAGGAGATCATGGACTTGGTGGACTCGTCTACGCCTCTTCCCCCTTGGTTCACTGAGGAAGATCTTGAAGCATATGGAAAGTTGTACGAGAAATCTGGTTTCCAAACAGCATTGCAACTTCCATATAGGGCAATAAAAGATGGCTTGGGCATACCTGATTCCACTATTGAAGTTCCAGCTCTTTTTATAATGGGAAAAAAGGATTATGTATACGAATTTCCAGGGATGAAAGATTACATAAACAGTGAAAAGCTGAAAGAGTTTGTCCCGGATTTGGAGATTGTATTTCTGCCAGAAGGAACACATTTTGTTCACGAACAATCACCTGAACAAGTTAATGAGCTCATCCTCACCTTCCTCCAAAAGCACATTTGA

Protein Analysis

313

Amino Acids

35.43

Weight (kDa)

5.07

Isoelectric Point (pI)

47.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 26 - 296 1.1e-24 alpha/beta hydrolase fold
Hydrolase_4 PF12146 27 - 134 1.7e-07 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 28 - 303 1.5e-16 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 755
AccB1I GGYRCC 1 cut(s) 123
AccI GTMKAC 2 cut(s) 596, 777
AccII CGCG 1 cut(s) 183
AciI CCGC 3 cut(s) 183, 203, 514
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 3 cut(s) 54, 144, 317
AcsI RAATTY 1 cut(s) 782
AcuI CTGAAG 2 cut(s) 62, 450
AcvI CACGTG 2 cut(s) 52, 120
AcyI GRCGYC 2 cut(s) 124, 490
AfaI GTAC 6 cut(s) 23, 33, 116, 326, 524, 653
AfiI CCNNNNNNNGG 3 cut(s) 153, 159, 841
AflIII ACRYGT 2 cut(s) 49, 117
AgsI TTSAA 3 cut(s) 447, 635, 737
AjnI CCWGG 3 cut(s) 460, 567, 787
AjuI GAANNNNNNNTTGG 4 cut(s) 140, 172, 468, 500
AluBI AGCT 7 cut(s) 46, 314, 479, 557, 746, 820, 910
AluI AGCT 7 cut(s) 46, 314, 479, 557, 746, 820, 910
Alw21I GWGCWC 1 cut(s) 912
AlwI GGATC 1 cut(s) 12
AlwNI CAGNNNCTG 1 cut(s) 479
Ama87I CYCGRG 2 cut(s) 215, 535
AoxI GGCC 6 cut(s) 37, 54, 144, 162, 222, 317
ApeKI GCWGC 1 cut(s) 557
ApoI RAATTY 1 cut(s) 782
AspLEI GCGC 1 cut(s) 126
AspS9I GGNCC 3 cut(s) 71, 162, 354
AsuC2I CCSGG 4 cut(s) 154, 161, 173, 836
AsuHPI GGTGA 2 cut(s) 882, 910
AvaI CYCGRG 2 cut(s) 215, 535
AvaII GGWCC 2 cut(s) 71, 354
AxyI CCTNAGG 1 cut(s) 282
BalI TGGCCA 1 cut(s) 146
BanI GGYRCC 1 cut(s) 123
BanII GRGCYC 1 cut(s) 912
BbrPI CACGTG 2 cut(s) 52, 120
Bbv12I GWGCWC 1 cut(s) 912
BbvI GCAGC 1 cut(s) 544
BccI CCATC 2 cut(s) 444, 701
BciT130I CCWGG 3 cut(s) 462, 569, 789
BciVI GTATCC 1 cut(s) 179
BcnI CCSGG 4 cut(s) 154, 161, 173, 836
BfmI CTRYAG 1 cut(s) 558
BfoI RGCGCY 1 cut(s) 127
BfuI GTATCC 1 cut(s) 179
BglII AGATCT 1 cut(s) 628
BisI GCNGC 1 cut(s) 558
BlsI GCNGC 1 cut(s) 559
Bme1390I CCNGG 7 cut(s) 154, 161, 173, 462, 569, 789, 836
Bme18I GGWCC 2 cut(s) 71, 354
BmeT110I CYCGRG 2 cut(s) 215, 535
BmgT120I GGNCC 3 cut(s) 71, 162, 354
BmiI GGNNCC 4 cut(s) 73, 125, 158, 459
BmrFI CCNGG 7 cut(s) 154, 161, 173, 462, 569, 789, 836
BmrI ACTGGG 1 cut(s) 403
BmsI GCATC 2 cut(s) 256, 487
BmuI ACTGGG 1 cut(s) 403
BpuMI CCSGG 4 cut(s) 154, 161, 173, 836
BsaAI YACGTR 2 cut(s) 52, 120
BsaHI GRCGYC 2 cut(s) 124, 490
BsaJI CCNNGG 5 cut(s) 94, 171, 357, 611, 788
BsaXI ACNNNNNCTCC 2 cut(s) 179, 209
Bsc4I CCNNNNNNNGG 3 cut(s) 153, 159, 841
Bse118I RCCGGY 1 cut(s) 319
Bse1I ACTGG 1 cut(s) 409
Bse21I CCTNAGG 1 cut(s) 282
Bse3DI GCAATG 2 cut(s) 523, 677
BseBI CCWGG 3 cut(s) 462, 569, 789
BseDI CCNNGG 5 cut(s) 94, 171, 357, 611, 788
BseGI GGATG 2 cut(s) 798, 912
BseLI CCNNNNNNNGG 3 cut(s) 153, 159, 841
BseMI GCAATG 2 cut(s) 523, 677
BseMII CTCAG 1 cut(s) 612
BseNI ACTGG 1 cut(s) 409
BseRI GAGGAG 1 cut(s) 553
BseXI GCAGC 1 cut(s) 544
BsgI GTGCAG 1 cut(s) 326
Bsh1236I CGCG 1 cut(s) 183
BshFI GGCC 6 cut(s) 39, 56, 146, 164, 224, 319
BshNI GGYRCC 1 cut(s) 123
BsiHKAI GWGCWC 1 cut(s) 912
BsiHKCI CYCGRG 2 cut(s) 215, 535
BsiSI CCGG 5 cut(s) 153, 160, 173, 320, 836
BslFI GGGAC 3 cut(s) 57, 390, 818
BslI CCNNNNNNNGG 3 cut(s) 153, 159, 841
BsmFI GGGAC 3 cut(s) 57, 390, 818
BsnI GGCC 6 cut(s) 39, 56, 146, 164, 224, 319
BsoBI CYCGRG 2 cut(s) 215, 535
Bsp1286I GDGCHC 1 cut(s) 912
Bsp1407I TGTACA 1 cut(s) 522
Bsp143I GATC 4 cut(s) 4, 135, 573, 628
Bsp19I CCATGG 1 cut(s) 94
BspACI CCGC 3 cut(s) 183, 203, 514
BspANI GGCC 6 cut(s) 39, 56, 146, 164, 224, 319
BspCNI CTCAG 1 cut(s) 613
BspFNI CGCG 1 cut(s) 183
BspLI GGNNCC 4 cut(s) 73, 125, 158, 459
BspMAI CTGCAG 1 cut(s) 562
BspPI GGATC 1 cut(s) 12
BspT107I GGYRCC 1 cut(s) 123
BsrDI GCAATG 2 cut(s) 523, 677
BsrFI RCCGGY 1 cut(s) 319
BsrGI TGTACA 1 cut(s) 522
BsrI ACTGG 1 cut(s) 409
BssAI RCCGGY 1 cut(s) 319
BssECI CCNNGG 5 cut(s) 94, 171, 357, 611, 788
BssMI GATC 4 cut(s) 4, 135, 573, 628
BssNAI GTATAC 1 cut(s) 778
BssNI GRCGYC 2 cut(s) 124, 490
BssT1I CCWWGG 3 cut(s) 94, 357, 611
Bst1107I GTATAC 1 cut(s) 778
Bst2UI CCWGG 3 cut(s) 462, 569, 789
Bst4CI ACNGT 3 cut(s) 31, 508, 812
Bst6I CTCTTC 1 cut(s) 609
BstACI GRCGYC 2 cut(s) 124, 490
BstAUI TGTACA 1 cut(s) 522
BstBAI YACGTR 2 cut(s) 52, 120
BstC8I GCNNGC 1 cut(s) 321
BstDEI CTNAG 2 cut(s) 282, 621
BstDSI CCRYGG 1 cut(s) 94
BstF5I GGATG 2 cut(s) 798, 912
BstFNI CGCG 1 cut(s) 183
BstH2I RGCGCY 1 cut(s) 127
BstHHI GCGC 1 cut(s) 126
BstKTI GATC 4 cut(s) 7, 138, 576, 631
BstMBI GATC 4 cut(s) 4, 135, 573, 628
BstMWI GCNNNNNNNGC 2 cut(s) 320, 388
BstNI CCWGG 3 cut(s) 462, 569, 789
BstNSI RCATGY 1 cut(s) 391
BstSCI CCNGG 7 cut(s) 152, 159, 171, 460, 567, 787, 834
BstSFI CTRYAG 1 cut(s) 558
BstUI CGCG 1 cut(s) 183
BstV1I GCAGC 1 cut(s) 544
BstX2I RGATCY 1 cut(s) 628
BstXI CCANNNNNNTGG 1 cut(s) 111
BstYI RGATCY 1 cut(s) 628
BstZ17I GTATAC 1 cut(s) 778
Bsu36I CCTNAGG 1 cut(s) 282
BsuI GTATCC 1 cut(s) 179
BsuRI GGCC 6 cut(s) 39, 56, 146, 164, 224, 319
BtgI CCRYGG 1 cut(s) 94
BtsCI GGATG 2 cut(s) 798, 912
BtsIMutI CAGTG 2 cut(s) 618, 817
Cac8I GCNNGC 1 cut(s) 321
CaiI CAGNNNCTG 1 cut(s) 479
CfoI GCGC 1 cut(s) 126
Cfr10I RCCGGY 1 cut(s) 319
Cfr13I GGNCC 3 cut(s) 71, 162, 354
CseI GACGC 1 cut(s) 498
CsiI ACCWGGT 1 cut(s) 460
Csp6I GTAC 6 cut(s) 22, 32, 115, 325, 523, 652
CspCI CAANNNNNGTGG 2 cut(s) 214, 249
CviAII CATG 3 cut(s) 95, 388, 577
CviQI GTAC 6 cut(s) 22, 32, 115, 325, 523, 652
DdeI CTNAG 2 cut(s) 282, 621
DinI GGCGCC 1 cut(s) 125
DpnI GATC 4 cut(s) 6, 137, 575, 630
DpnII GATC 4 cut(s) 4, 135, 573, 628
EaeI YGGCCR 3 cut(s) 54, 144, 317
Eam1104I CTCTTC 1 cut(s) 609
EarI CTCTTC 1 cut(s) 609
Ecl136II GAGCTC 1 cut(s) 910
Eco130I CCWWGG 3 cut(s) 94, 357, 611
Eco147I AGGCCT 1 cut(s) 39
Eco24I GRGCYC 1 cut(s) 912
Eco47I GGWCC 2 cut(s) 71, 354
Eco53kI GAGCTC 1 cut(s) 910
Eco57I CTGAAG 2 cut(s) 62, 450
Eco72I CACGTG 2 cut(s) 52, 120
Eco81I CCTNAGG 1 cut(s) 282
Eco88I CYCGRG 2 cut(s) 215, 535
EcoICRI GAGCTC 1 cut(s) 910
EcoO109I RGGNCCY 2 cut(s) 71, 354
EcoRII CCWGG 3 cut(s) 460, 567, 787
EcoT14I CCWWGG 3 cut(s) 94, 357, 611
EcoT38I GRGCYC 1 cut(s) 912
EgeI GGCGCC 1 cut(s) 125
EheI GGCGCC 1 cut(s) 125
ErhI CCWWGG 3 cut(s) 94, 357, 611
FaeI CATG 3 cut(s) 98, 391, 580
FalI AAGNNNNNCTT 2 cut(s) 212, 244
FaqI GGGAC 3 cut(s) 57, 390, 818
FatI CATG 3 cut(s) 94, 387, 576
FauI CCCGC 1 cut(s) 210
FauNDI CATATG 1 cut(s) 640
FblI GTMKAC 2 cut(s) 596, 777
Fnu4HI GCNGC 1 cut(s) 558
FokI GGATG 2 cut(s) 805, 899
FriOI GRGCYC 1 cut(s) 912
Fsp4HI GCNGC 1 cut(s) 558
GlaI GCGC 1 cut(s) 125
GluI GCNGC 1 cut(s) 558
HaeII RGCGCY 1 cut(s) 127
HaeIII GGCC 6 cut(s) 39, 56, 146, 164, 224, 319
HapII CCGG 5 cut(s) 153, 160, 173, 320, 836
HgaI GACGC 1 cut(s) 498
HhaI GCGC 1 cut(s) 126
Hin1I GRCGYC 2 cut(s) 124, 490
Hin1II CATG 3 cut(s) 98, 391, 580
Hin6I GCGC 1 cut(s) 124
HinP1I GCGC 1 cut(s) 124
HinfI GANTC 4 cut(s) 99, 192, 590, 725
HpaII CCGG 5 cut(s) 153, 160, 173, 320, 836
HphI GGTGA 2 cut(s) 882, 910
Hpy166II GTNNAC 7 cut(s) 117, 523, 589, 597, 618, 778, 880
Hpy188I TCNGA 3 cut(s) 65, 199, 299
Hpy188III TCNNGA 6 cut(s) 263, 428, 447, 535, 632, 881
Hpy8I GTNNAC 7 cut(s) 117, 523, 589, 597, 618, 778, 880
HpyAV CCTTC 6 cut(s) 214, 238, 425, 434, 857, 931
HpyCH4III ACNGT 3 cut(s) 31, 508, 812
HpyCH4IV ACGT 2 cut(s) 51, 119
HpyCH4V TGCA 3 cut(s) 343, 560, 682
HpyF10VI GCNNNNNNNGC 2 cut(s) 320, 388
HpyF3I CTNAG 2 cut(s) 282, 621
HpySE526I ACGT 2 cut(s) 51, 119
Hsp92I GRCGYC 2 cut(s) 124, 490
Hsp92II CATG 3 cut(s) 98, 391, 580
HspAI GCGC 1 cut(s) 124
KasI GGCGCC 1 cut(s) 123
KroI GCCGGC 1 cut(s) 319
KroNI GCCGGC 1 cut(s) 321
Kzo9I GATC 4 cut(s) 4, 135, 573, 628
LmnI GCTCC 1 cut(s) 311
Lsp1109I GCAGC 1 cut(s) 544
LweI GCATC 2 cut(s) 256, 487
MabI ACCWGGT 1 cut(s) 460
MaeII ACGT 2 cut(s) 51, 119
MaeIII GTNAC 1 cut(s) 367
MalI GATC 4 cut(s) 6, 137, 575, 630
MboI GATC 4 cut(s) 4, 135, 573, 628
MboII GAAGA 2 cut(s) 596, 638
MflI RGATCY 1 cut(s) 628
MhlI GDGCHC 1 cut(s) 912
MlsI TGGCCA 1 cut(s) 146
MluCI AATT 1 cut(s) 782
MluNI TGGCCA 1 cut(s) 146
Mly113I GGCGCC 1 cut(s) 124
MlyI GAGTC 2 cut(s) 186, 584
MmeI TCCRAC 1 cut(s) 222
MnlI CCTC 9 cut(s) 101, 216, 260, 302, 531, 612, 616, 926, 935
Mox20I TGGCCA 1 cut(s) 146
MroNI GCCGGC 1 cut(s) 319
MscI TGGCCA 1 cut(s) 146
MseI TTAA 2 cut(s) 417, 903
Msp20I TGGCCA 1 cut(s) 146
MspI CCGG 5 cut(s) 153, 160, 173, 320, 836
MspR9I CCNGG 7 cut(s) 154, 161, 173, 462, 569, 789, 836
MvaI CCWGG 3 cut(s) 462, 569, 789
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 2 cut(s) 320, 388
NaeI GCCGGC 1 cut(s) 321
NarI GGCGCC 1 cut(s) 124
NciI CCSGG 4 cut(s) 154, 161, 173, 836
NcoI CCATGG 1 cut(s) 94
NdeI CATATG 1 cut(s) 640
NdeII GATC 4 cut(s) 4, 135, 573, 628
NgoMIV GCCGGC 1 cut(s) 319
NlaIII CATG 3 cut(s) 98, 391, 580
NlaIV GGNNCC 4 cut(s) 73, 125, 158, 459
NspI RCATGY 1 cut(s) 391
PaeR7I CTCGAG 1 cut(s) 535
PceI AGGCCT 1 cut(s) 39
PcsI WCGNNNNNNNCGW 1 cut(s) 195
PdiI GCCGGC 1 cut(s) 321
PfeI GAWTC 2 cut(s) 99, 725
PfoI TCCNGGA 1 cut(s) 834
PkrI GCNGC 1 cut(s) 559
PleI GAGTC 2 cut(s) 186, 584
PluTI GGCGCC 1 cut(s) 127
PmaCI CACGTG 2 cut(s) 52, 120
PmlI CACGTG 2 cut(s) 52, 120
PpsI GAGTC 2 cut(s) 186, 584
Ppu21I YACGTR 2 cut(s) 52, 120
PpuMI RGGWCCY 2 cut(s) 71, 354
PsiI TTATAA 1 cut(s) 755
Psp124BI GAGCTC 1 cut(s) 912
Psp5II RGGWCCY 2 cut(s) 71, 354
Psp6I CCWGG 3 cut(s) 460, 567, 787
PspCI CACGTG 2 cut(s) 52, 120
PspGI CCWGG 3 cut(s) 460, 567, 787
PspN4I GGNNCC 4 cut(s) 73, 125, 158, 459
PspPI GGNCC 3 cut(s) 71, 162, 354
PspPPI RGGWCCY 2 cut(s) 71, 354
PstI CTGCAG 1 cut(s) 562
PstNI CAGNNNCTG 1 cut(s) 479
PsuI RGATCY 1 cut(s) 628
RsaI GTAC 6 cut(s) 23, 33, 116, 326, 524, 653
RsaNI GTAC 6 cut(s) 22, 32, 115, 325, 523, 652
SacI GAGCTC 1 cut(s) 912
SaqAI TTAA 2 cut(s) 417, 903
SatI GCNGC 1 cut(s) 558
Sau3AI GATC 4 cut(s) 4, 135, 573, 628
Sau96I GGNCC 3 cut(s) 71, 162, 354
SchI GAGTC 2 cut(s) 186, 584
ScrFI CCNGG 7 cut(s) 154, 161, 173, 462, 569, 789, 836
SduI GDGCHC 1 cut(s) 912
SexAI ACCWGGT 1 cut(s) 460
SfaNI GCATC 2 cut(s) 256, 487
SfcI CTRYAG 1 cut(s) 558
SfoI GGCGCC 1 cut(s) 125
Sfr274I CTCGAG 1 cut(s) 535
SinI GGWCC 2 cut(s) 71, 354
SlaI CTCGAG 1 cut(s) 535
SmlI CTYRAG 1 cut(s) 535
SmoI CTYRAG 1 cut(s) 535
Sse9I AATT 1 cut(s) 782
SseBI AGGCCT 1 cut(s) 39
SsiI CCGC 3 cut(s) 183, 203, 514
SspDI GGCGCC 1 cut(s) 123
SstI GAGCTC 1 cut(s) 912
StuI AGGCCT 1 cut(s) 39
StyD4I CCNGG 7 cut(s) 152, 159, 171, 460, 567, 787, 834
StyI CCWWGG 3 cut(s) 94, 357, 611
TaaI ACNGT 3 cut(s) 31, 508, 812
TaiI ACGT 2 cut(s) 54, 122
TaqI TCGA 1 cut(s) 536
TasI AATT 1 cut(s) 782
TatI WGTACW 2 cut(s) 21, 522
TfiI GAWTC 2 cut(s) 99, 725
Tru1I TTAA 2 cut(s) 417, 903
Tru9I TTAA 2 cut(s) 417, 903
TscAI CASTG 2 cut(s) 625, 817
TseI GCWGC 1 cut(s) 557
TspDTI ATGAA 2 cut(s) 403, 809
TspGWI ACGGA 1 cut(s) 204
TspRI CASTG 2 cut(s) 625, 817
VpaK11BI GGWCC 2 cut(s) 71, 354
XapI RAATTY 1 cut(s) 782
XceI RCATGY 1 cut(s) 391
XhoI CTCGAG 1 cut(s) 535
XmiI GTMKAC 2 cut(s) 596, 777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.