RLG00000031499

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
5648312 .. 5650060
1749 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031499

Sequence Viewer

Length: 822 bp
ATGGACCAGATCGAGCACAAGTACCTAACCGTGCAAGGCCTAAGGCTCCATGTGGCCGACATCGGAACAGGTCCCAATGTGGTCGTGTTCCTACACGGATTCTCAGAAATATGGTACACGTGGCACCACCAGATGATCGCTTTGGCCCAGGCCGGGTGCCGGGCCATCGCGCCCGACTACCGCGGATATGGACTCTCCTACCCGCCTGCACAACCCGAGAAGGCCTCCTTCCTTGAACTTGACAATGACCTCCTTGCTATTCTTGATGCCCTTGCTATTCCTAAGGTCTTCCTCATCGGAAAAGATTTTGGAGCTTGGCCGGCATACATATTTGCCGGCCTGCACCCAGAGAGGACCTTGGGAGTTGTAACAATGGGAGTGCCATACATGCCAAAGTCGAGTCGTCCCCAATATCCTTCTATGTTTCAAGATGACAGGTGTGGCAGGGCAGAAGCTGATTTTGGACGCCTTGATGCGAAAACAGTTATTCGCATTGTGTACATTCTTTTCTCGAGGAGTGAAATACCAACAGCTGCAGAAAACCAGGAGATCATGGACTTGGTGGACTCGTCTATGCCTCATCCCCCTTGGTTCACTGAGGAAGATCTTGAAGCATACGGAAAGTTGTTTAAGAAATTTGGTTTCCAAACCGCATTGCAACCTCCACATAGGATGAAAGAATACATAGACAGTGATCAACTGAAAGAGTTTGTCCAGGATTTGGAGATTGTATTTCTGCCAGAAGGAACACGTTTTGTTCATGAACAATTACCTGACCAGGTTAAGGAGCTCATCCTCACCTTCCTCCGAAAGCACATTTGA

Protein Analysis

274

Amino Acids

31.18

Weight (kDa)

5.45

Isoelectric Point (pI)

41.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 26 - 164 2.4e-20 alpha/beta hydrolase fold
Hydrolase_4 PF12146 27 - 126 4.3e-07 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 28 - 151 9.4e-11 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 123, 156
AccB7I CCANNNNNTGG 1 cut(s) 721
AccII CGCG 2 cut(s) 170, 183
AciI CCGC 4 cut(s) 181, 183, 203, 651
AcoI YGGCCR 2 cut(s) 54, 317
AcsI RAATTY 1 cut(s) 635
AcvI CACGTG 1 cut(s) 120
AcyI GRCGYC 1 cut(s) 466
AfaI GTAC 3 cut(s) 23, 116, 500
AfiI CCNNNNNNNGG 4 cut(s) 153, 159, 721, 784
AflIII ACRYGT 2 cut(s) 117, 749
AgsI TTSAA 3 cut(s) 236, 428, 611
AjnI CCWGG 4 cut(s) 147, 543, 714, 777
AjuI GAANNNNNNNTTGG 2 cut(s) 444, 476
AluBI AGCT 4 cut(s) 314, 455, 533, 790
AluI AGCT 4 cut(s) 314, 455, 533, 790
Alw21I GWGCWC 2 cut(s) 18, 792
AlwNI CAGNNNCTG 1 cut(s) 455
Ama87I CYCGRG 2 cut(s) 215, 511
AoxI GGCC 8 cut(s) 37, 54, 144, 150, 162, 222, 317, 337
ApeKI GCWGC 1 cut(s) 533
ApoI RAATTY 1 cut(s) 635
AspLEI GCGC 1 cut(s) 172
AspS9I GGNCC 5 cut(s) 4, 71, 145, 162, 354
AsuC2I CCSGG 2 cut(s) 154, 161
AsuHPI GGTGA 1 cut(s) 790
AvaI CYCGRG 2 cut(s) 215, 511
AvaII GGWCC 3 cut(s) 4, 71, 354
AxyI CCTNAGG 2 cut(s) 41, 282
BanI GGYRCC 2 cut(s) 123, 156
BanII GRGCYC 1 cut(s) 792
BbrPI CACGTG 1 cut(s) 120
BbsI GAAGAC 1 cut(s) 280
Bbv12I GWGCWC 2 cut(s) 18, 792
BbvI GCAGC 1 cut(s) 520
BccI CCATC 1 cut(s) 173
BciT130I CCWGG 4 cut(s) 149, 545, 716, 779
BclI TGATCA 1 cut(s) 694
BcnI CCSGG 2 cut(s) 154, 161
BfmI CTRYAG 1 cut(s) 534
BglII AGATCT 1 cut(s) 604
BisI GCNGC 1 cut(s) 534
BlsI GCNGC 1 cut(s) 535
Bme1390I CCNGG 6 cut(s) 149, 154, 161, 545, 716, 779
Bme18I GGWCC 3 cut(s) 4, 71, 354
BmeT110I CYCGRG 2 cut(s) 215, 511
BmgT120I GGNCC 5 cut(s) 4, 71, 145, 162, 354
BmiI GGNNCC 4 cut(s) 47, 73, 125, 158
BmrFI CCNGG 6 cut(s) 149, 154, 161, 545, 716, 779
BmsI GCATC 2 cut(s) 256, 463
BpiI GAAGAC 1 cut(s) 280
BplI GAGNNNNNCTC 2 cut(s) 209, 241
BpuMI CCSGG 2 cut(s) 154, 161
BsaAI YACGTR 1 cut(s) 120
BsaHI GRCGYC 1 cut(s) 466
BsaJI CCNNGG 4 cut(s) 147, 181, 357, 587
Bsc4I CCNNNNNNNGG 4 cut(s) 153, 159, 721, 784
Bse118I RCCGGY 2 cut(s) 319, 335
Bse21I CCTNAGG 2 cut(s) 41, 282
Bse3DI GCAATG 1 cut(s) 653
BseBI CCWGG 4 cut(s) 149, 545, 716, 779
BseDI CCNNGG 4 cut(s) 147, 181, 357, 587
BseGI GGATG 3 cut(s) 580, 678, 792
BseLI CCNNNNNNNGG 4 cut(s) 153, 159, 721, 784
BseMI GCAATG 1 cut(s) 653
BseMII CTCAG 2 cut(s) 117, 588
BseRI GAGGAG 1 cut(s) 529
BseXI GCAGC 1 cut(s) 520
BsgI GTGCAG 2 cut(s) 192, 326
Bsh1236I CGCG 2 cut(s) 170, 183
BshFI GGCC 8 cut(s) 39, 56, 146, 152, 164, 224, 319, 339
BshNI GGYRCC 2 cut(s) 123, 156
BsiHKAI GWGCWC 2 cut(s) 18, 792
BsiHKCI CYCGRG 2 cut(s) 215, 511
BsiSI CCGG 4 cut(s) 153, 160, 320, 336
BslFI GGGAC 2 cut(s) 57, 390
BslI CCNNNNNNNGG 4 cut(s) 153, 159, 721, 784
BsmFI GGGAC 2 cut(s) 57, 390
BsnI GGCC 8 cut(s) 39, 56, 146, 152, 164, 224, 319, 339
BsoBI CYCGRG 2 cut(s) 215, 511
Bsp1286I GDGCHC 2 cut(s) 18, 792
Bsp1407I TGTACA 1 cut(s) 498
Bsp143I GATC 5 cut(s) 9, 135, 549, 604, 694
BspACI CCGC 4 cut(s) 181, 183, 203, 651
BspANI GGCC 8 cut(s) 39, 56, 146, 152, 164, 224, 319, 339
BspCNI CTCAG 2 cut(s) 116, 589
BspFNI CGCG 2 cut(s) 170, 183
BspHI TCATGA 1 cut(s) 760
BspLI GGNNCC 4 cut(s) 47, 73, 125, 158
BspMAI CTGCAG 1 cut(s) 538
BspT107I GGYRCC 2 cut(s) 123, 156
BsrDI GCAATG 1 cut(s) 653
BsrFI RCCGGY 2 cut(s) 319, 335
BsrGI TGTACA 1 cut(s) 498
BssAI RCCGGY 2 cut(s) 319, 335
BssECI CCNNGG 4 cut(s) 147, 181, 357, 587
BssMI GATC 5 cut(s) 9, 135, 549, 604, 694
BssNI GRCGYC 1 cut(s) 466
BssT1I CCWWGG 2 cut(s) 357, 587
Bst2UI CCWGG 4 cut(s) 149, 545, 716, 779
Bst4CI ACNGT 3 cut(s) 31, 484, 692
BstACI GRCGYC 1 cut(s) 466
BstAUI TGTACA 1 cut(s) 498
BstBAI YACGTR 1 cut(s) 120
BstC8I GCNNGC 4 cut(s) 207, 321, 337, 341
BstDEI CTNAG 4 cut(s) 41, 103, 282, 597
BstDSI CCRYGG 1 cut(s) 181
BstF5I GGATG 3 cut(s) 580, 678, 792
BstFNI CGCG 2 cut(s) 170, 183
BstHHI GCGC 1 cut(s) 172
BstKTI GATC 5 cut(s) 12, 138, 552, 607, 697
BstMBI GATC 5 cut(s) 9, 135, 549, 604, 694
BstMWI GCNNNNNNNGC 2 cut(s) 320, 388
BstNI CCWGG 4 cut(s) 149, 545, 716, 779
BstNSI RCATGY 1 cut(s) 391
BstSCI CCNGG 6 cut(s) 147, 152, 159, 543, 714, 777
BstSFI CTRYAG 1 cut(s) 534
BstUI CGCG 2 cut(s) 170, 183
BstV1I GCAGC 1 cut(s) 520
BstV2I GAAGAC 1 cut(s) 280
BstX2I RGATCY 1 cut(s) 604
BstYI RGATCY 1 cut(s) 604
Bsu36I CCTNAGG 2 cut(s) 41, 282
BsuRI GGCC 8 cut(s) 39, 56, 146, 152, 164, 224, 319, 339
BtgI CCRYGG 1 cut(s) 181
BtgZI GCGATG 1 cut(s) 151
BtsCI GGATG 3 cut(s) 580, 678, 792
BtsIMutI CAGTG 2 cut(s) 594, 697
Cac8I GCNNGC 4 cut(s) 207, 321, 337, 341
CaiI CAGNNNCTG 1 cut(s) 455
CciI TCATGA 1 cut(s) 760
CfoI GCGC 1 cut(s) 172
Cfr10I RCCGGY 2 cut(s) 319, 335
Cfr13I GGNCC 5 cut(s) 4, 71, 145, 162, 354
Cfr42I CCGCGG 1 cut(s) 184
CseI GACGC 1 cut(s) 474
CsiI ACCWGGT 1 cut(s) 777
Csp6I GTAC 3 cut(s) 22, 115, 499
CviAII CATG 4 cut(s) 50, 388, 553, 761
CviQI GTAC 3 cut(s) 22, 115, 499
DdeI CTNAG 4 cut(s) 41, 103, 282, 597
DpnI GATC 5 cut(s) 11, 137, 551, 606, 696
DpnII GATC 5 cut(s) 9, 135, 549, 604, 694
EaeI YGGCCR 2 cut(s) 54, 317
Ecl136II GAGCTC 1 cut(s) 790
Eco130I CCWWGG 2 cut(s) 357, 587
Eco147I AGGCCT 2 cut(s) 39, 224
Eco24I GRGCYC 1 cut(s) 792
Eco47I GGWCC 3 cut(s) 4, 71, 354
Eco53kI GAGCTC 1 cut(s) 790
Eco72I CACGTG 1 cut(s) 120
Eco81I CCTNAGG 2 cut(s) 41, 282
Eco88I CYCGRG 2 cut(s) 215, 511
EcoICRI GAGCTC 1 cut(s) 790
EcoO109I RGGNCCY 2 cut(s) 71, 354
EcoRII CCWGG 4 cut(s) 147, 543, 714, 777
EcoT14I CCWWGG 2 cut(s) 357, 587
EcoT38I GRGCYC 1 cut(s) 792
ErhI CCWWGG 2 cut(s) 357, 587
FaeI CATG 4 cut(s) 53, 391, 556, 764
FalI AAGNNNNNCTT 2 cut(s) 212, 244
FaqI GGGAC 2 cut(s) 57, 390
FatI CATG 4 cut(s) 49, 387, 552, 760
FauI CCCGC 1 cut(s) 210
FbaI TGATCA 1 cut(s) 694
Fnu4HI GCNGC 1 cut(s) 534
FokI GGATG 3 cut(s) 567, 685, 779
FriOI GRGCYC 1 cut(s) 792
Fsp4HI GCNGC 1 cut(s) 534
GlaI GCGC 1 cut(s) 171
GluI GCNGC 1 cut(s) 534
HaeIII GGCC 8 cut(s) 39, 56, 146, 152, 164, 224, 319, 339
HapII CCGG 4 cut(s) 153, 160, 320, 336
HgaI GACGC 1 cut(s) 474
HhaI GCGC 1 cut(s) 172
Hin1I GRCGYC 1 cut(s) 466
Hin1II CATG 4 cut(s) 53, 391, 556, 764
Hin6I GCGC 1 cut(s) 170
HinP1I GCGC 1 cut(s) 170
HinfI GANTC 4 cut(s) 99, 192, 400, 566
HpaII CCGG 4 cut(s) 153, 160, 320, 336
HphI GGTGA 1 cut(s) 790
Hpy166II GTNNAC 4 cut(s) 117, 499, 565, 594
Hpy188I TCNGA 4 cut(s) 65, 106, 299, 809
Hpy188III TCNNGA 5 cut(s) 263, 428, 511, 608, 761
Hpy8I GTNNAC 4 cut(s) 117, 499, 565, 594
HpyAV CCTTC 5 cut(s) 214, 238, 426, 737, 811
HpyCH4III ACNGT 3 cut(s) 31, 484, 692
HpyCH4IV ACGT 2 cut(s) 119, 751
HpyCH4V TGCA 5 cut(s) 34, 209, 343, 536, 658
HpyF10VI GCNNNNNNNGC 2 cut(s) 320, 388
HpyF3I CTNAG 4 cut(s) 41, 103, 282, 597
HpySE526I ACGT 2 cut(s) 119, 751
Hsp92I GRCGYC 1 cut(s) 466
Hsp92II CATG 4 cut(s) 53, 391, 556, 764
HspAI GCGC 1 cut(s) 170
KroI GCCGGC 2 cut(s) 319, 335
KroNI GCCGGC 2 cut(s) 321, 337
Ksp22I TGATCA 1 cut(s) 694
KspI CCGCGG 1 cut(s) 184
Kzo9I GATC 5 cut(s) 9, 135, 549, 604, 694
LmnI GCTCC 3 cut(s) 51, 311, 787
Lsp1109I GCAGC 1 cut(s) 520
LweI GCATC 2 cut(s) 256, 463
MabI ACCWGGT 1 cut(s) 777
MaeII ACGT 2 cut(s) 119, 751
MaeIII GTNAC 1 cut(s) 367
MalI GATC 5 cut(s) 11, 137, 551, 606, 696
MboI GATC 5 cut(s) 9, 135, 549, 604, 694
MboII GAAGA 2 cut(s) 280, 614
MflI RGATCY 1 cut(s) 604
MhlI GDGCHC 2 cut(s) 18, 792
MluCI AATT 2 cut(s) 635, 767
MlyI GAGTC 3 cut(s) 186, 409, 560
MroNI GCCGGC 2 cut(s) 319, 335
MseI TTAA 2 cut(s) 630, 783
MspA1I CMGCKG 2 cut(s) 183, 533
MspI CCGG 4 cut(s) 153, 160, 320, 336
MspR9I CCNGG 6 cut(s) 149, 154, 161, 545, 716, 779
MvaI CCWGG 4 cut(s) 149, 545, 716, 779
MvnI CGCG 2 cut(s) 170, 183
MwoI GCNNNNNNNGC 2 cut(s) 320, 388
NaeI GCCGGC 2 cut(s) 321, 337
NciI CCSGG 2 cut(s) 154, 161
NdeII GATC 5 cut(s) 9, 135, 549, 604, 694
NgoMIV GCCGGC 2 cut(s) 319, 335
NlaIII CATG 4 cut(s) 53, 391, 556, 764
NlaIV GGNNCC 4 cut(s) 47, 73, 125, 158
NspI RCATGY 1 cut(s) 391
PaeR7I CTCGAG 1 cut(s) 511
PagI TCATGA 1 cut(s) 760
PceI AGGCCT 2 cut(s) 39, 224
PdiI GCCGGC 2 cut(s) 321, 337
PfeI GAWTC 1 cut(s) 99
PflMI CCANNNNNTGG 1 cut(s) 721
PfoI TCCNGGA 1 cut(s) 714
PkrI GCNGC 1 cut(s) 535
PleI GAGTC 3 cut(s) 186, 408, 560
PmaCI CACGTG 1 cut(s) 120
PmlI CACGTG 1 cut(s) 120
PpsI GAGTC 3 cut(s) 186, 408, 560
Ppu21I YACGTR 1 cut(s) 120
PpuMI RGGWCCY 2 cut(s) 71, 354
Psp124BI GAGCTC 1 cut(s) 792
Psp5II RGGWCCY 2 cut(s) 71, 354
Psp6I CCWGG 4 cut(s) 147, 543, 714, 777
PspCI CACGTG 1 cut(s) 120
PspGI CCWGG 4 cut(s) 147, 543, 714, 777
PspN4I GGNNCC 4 cut(s) 47, 73, 125, 158
PspPI GGNCC 5 cut(s) 4, 71, 145, 162, 354
PspPPI RGGWCCY 2 cut(s) 71, 354
PstI CTGCAG 1 cut(s) 538
PstNI CAGNNNCTG 1 cut(s) 455
PsuI RGATCY 1 cut(s) 604
PvuII CAGCTG 1 cut(s) 533
RsaI GTAC 3 cut(s) 23, 116, 500
RsaNI GTAC 3 cut(s) 22, 115, 499
SacI GAGCTC 1 cut(s) 792
SacII CCGCGG 1 cut(s) 184
SaqAI TTAA 2 cut(s) 630, 783
SatI GCNGC 1 cut(s) 534
Sau3AI GATC 5 cut(s) 9, 135, 549, 604, 694
Sau96I GGNCC 5 cut(s) 4, 71, 145, 162, 354
SchI GAGTC 3 cut(s) 186, 409, 560
ScrFI CCNGG 6 cut(s) 149, 154, 161, 545, 716, 779
SduI GDGCHC 2 cut(s) 18, 792
SexAI ACCWGGT 1 cut(s) 777
SfaNI GCATC 2 cut(s) 256, 463
SfcI CTRYAG 1 cut(s) 534
Sfr274I CTCGAG 1 cut(s) 511
Sfr303I CCGCGG 1 cut(s) 184
SgrBI CCGCGG 1 cut(s) 184
SinI GGWCC 3 cut(s) 4, 71, 354
SlaI CTCGAG 1 cut(s) 511
SmlI CTYRAG 1 cut(s) 511
SmoI CTYRAG 1 cut(s) 511
Sse9I AATT 2 cut(s) 635, 767
SseBI AGGCCT 2 cut(s) 39, 224
SsiI CCGC 4 cut(s) 181, 183, 203, 651
SstI GAGCTC 1 cut(s) 792
StuI AGGCCT 2 cut(s) 39, 224
StyD4I CCNGG 6 cut(s) 147, 152, 159, 543, 714, 777
StyI CCWWGG 2 cut(s) 357, 587
TaaI ACNGT 3 cut(s) 31, 484, 692
TaiI ACGT 2 cut(s) 122, 754
TaqI TCGA 3 cut(s) 12, 398, 512
TasI AATT 2 cut(s) 635, 767
TatI WGTACW 1 cut(s) 498
TfiI GAWTC 1 cut(s) 99
Tru1I TTAA 2 cut(s) 630, 783
Tru9I TTAA 2 cut(s) 630, 783
TscAI CASTG 2 cut(s) 601, 697
TseI GCWGC 1 cut(s) 533
TspDTI ATGAA 3 cut(s) 689, 749, 777
TspGWI ACGGA 2 cut(s) 111, 633
TspRI CASTG 2 cut(s) 601, 697
Van91I CCANNNNNTGG 1 cut(s) 721
VpaK11BI GGWCC 3 cut(s) 4, 71, 354
XapI RAATTY 1 cut(s) 635
XceI RCATGY 1 cut(s) 391
XhoI CTCGAG 1 cut(s) 511
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.