FvH4_3g04784

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
2759120 .. 2761238
2119 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g04784.t1

Sequence Viewer

Length: 942 bp
ATGGACCAAATCCAGCACAAGTATATAACCGTACAAGGCCTGAAGCTCCACGTGGCCGACGTCGGAACAGGTCCAAATGTGGTCGTGTTCCTACATGGATTCCCGGAAATATGGTACACGTGGCGCCACCAGATGATCGCTCTGGCCAACGCCGGATTTCGGGCAATCGCTCCCGACTACCGCGGGTATGGACTCTCTGACCCGCCTCCACAACCCGAGAAGGCCTCCTTCCTTGACCTTGACAATGACCTCCTTGCAATTCTTGATGCCCTTGCCATTCCTAAGGTTTTCCTCATCGGAAAAGATTTTGGAGCTTGGCCGGCGTACATATTTGCCGGTCTGCACCCAGAAAGGACCTTGGGAGTTGTAACAATGGGAGTGCCATACATGCCAAAGTCAAGTCGTCCCCAATTCAATAACCACCTTCCTGAAGGTTTCTATATTTCAAGATGGCAGGAACCAGGTGGCAGGGCTGAAGCTGATTTTGGACGCCTTGATGCGAAAACAGTTATTCGCAATGTGTACATTCTTTTCTCGAGGAGTGAAATACCAATAGCTTCAGAAAACCAGGAGATCATGGACTTGGTGGACTCGTCCACGCCTCTCCCCCCTTGGTTCACTGAGGAAGATCTTGAGGTTTATGGAAAGTTGTACGAGAAATCTGGTTTTCAAACTGCATTGCAACTTCCATATAGGGCAATGAAACATGAGTTGGGCATAGCTGATTCAACCATTGAAGCTCCAGCACTTTTCATAATGGGAACAAAGGATTATGTATACGAATTTCCAGGGATGAAAGATTACATAACCAGTGCAAAGCTGAAAGAGTTTGTCCCGGATTTGGAGATTGTATTTCTGCCAGAAGGAACTCATTTTGTTCATGAACAACTACCTGACCAGGTTAATGAGCTCATCCTCACCTTTCTCCGAAAGCACATCTGA

Protein Analysis

314

Amino Acids

35.46

Weight (kDa)

5.2

Isoelectric Point (pI)

40.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 26 - 293 6.6e-25 alpha/beta hydrolase fold
Hydrolase_4 PF12146 27 - 126 1.7e-07 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 28 - 303 2.4e-15 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 63
AccB1I GGYRCC 1 cut(s) 123
AccI GTMKAC 1 cut(s) 777
AccII CGCG 1 cut(s) 183
AciI CCGC 3 cut(s) 181, 183, 203
AcoI YGGCCR 3 cut(s) 54, 144, 317
AcsI RAATTY 1 cut(s) 782
AcuI CTGAAG 4 cut(s) 62, 450, 495, 543
AcvI CACGTG 2 cut(s) 52, 120
AcyI GRCGYC 3 cut(s) 60, 124, 490
AfaI GTAC 5 cut(s) 33, 116, 326, 524, 653
AfiI CCNNNNNNNGG 2 cut(s) 159, 841
AflIII ACRYGT 1 cut(s) 117
AgsI TTSAA 5 cut(s) 415, 447, 671, 729, 737
AjnI CCWGG 4 cut(s) 460, 567, 787, 897
AjuI GAANNNNNNNTTGG 4 cut(s) 468, 500, 695, 727
AluBI AGCT 8 cut(s) 46, 314, 479, 557, 722, 740, 820, 910
AluI AGCT 8 cut(s) 46, 314, 479, 557, 722, 740, 820, 910
Alw21I GWGCWC 1 cut(s) 912
Ama87I CYCGRG 2 cut(s) 215, 535
AoxI GGCC 5 cut(s) 37, 54, 144, 222, 317
ApoI RAATTY 1 cut(s) 782
AspLEI GCGC 1 cut(s) 126
AspS9I GGNCC 3 cut(s) 4, 71, 354
AsuC2I CCSGG 2 cut(s) 104, 836
AsuHPI GGTGA 1 cut(s) 910
AvaI CYCGRG 2 cut(s) 215, 535
AvaII GGWCC 3 cut(s) 4, 71, 354
AxyI CCTNAGG 1 cut(s) 282
BalI TGGCCA 1 cut(s) 146
BanI GGYRCC 1 cut(s) 123
BanII GRGCYC 1 cut(s) 912
BbrPI CACGTG 2 cut(s) 52, 120
Bbv12I GWGCWC 1 cut(s) 912
BccI CCATC 1 cut(s) 444
BciT130I CCWGG 4 cut(s) 462, 569, 789, 899
BcnI CCSGG 2 cut(s) 104, 836
BfoI RGCGCY 1 cut(s) 127
BglII AGATCT 1 cut(s) 628
Bme1390I CCNGG 6 cut(s) 104, 462, 569, 789, 836, 899
Bme18I GGWCC 3 cut(s) 4, 71, 354
BmeT110I CYCGRG 2 cut(s) 215, 535
BmgT120I GGNCC 3 cut(s) 4, 71, 354
BmiI GGNNCC 2 cut(s) 125, 459
BmrFI CCNGG 6 cut(s) 104, 462, 569, 789, 836, 899
BmsI GCATC 2 cut(s) 256, 487
BplI GAGNNNNNCTC 2 cut(s) 209, 241
BpmI CTGGAG 1 cut(s) 726
BpuEI CTTGAG 1 cut(s) 653
BpuMI CCSGG 2 cut(s) 104, 836
BsaAI YACGTR 2 cut(s) 52, 120
BsaHI GRCGYC 3 cut(s) 60, 124, 490
BsaJI CCNNGG 4 cut(s) 181, 357, 611, 788
Bsc4I CCNNNNNNNGG 2 cut(s) 159, 841
Bse118I RCCGGY 2 cut(s) 319, 335
Bse1I ACTGG 1 cut(s) 810
Bse21I CCTNAGG 1 cut(s) 282
Bse3DI GCAATG 3 cut(s) 523, 677, 705
BseBI CCWGG 4 cut(s) 462, 569, 789, 899
BseDI CCNNGG 4 cut(s) 181, 357, 611, 788
BseGI GGATG 2 cut(s) 798, 912
BseLI CCNNNNNNNGG 2 cut(s) 159, 841
BseMI GCAATG 3 cut(s) 523, 677, 705
BseMII CTCAG 1 cut(s) 612
BseNI ACTGG 1 cut(s) 810
BseRI GAGGAG 1 cut(s) 553
BsgI GTGCAG 1 cut(s) 326
Bsh1236I CGCG 1 cut(s) 183
BshFI GGCC 5 cut(s) 39, 56, 146, 224, 319
BshNI GGYRCC 1 cut(s) 123
BsiHKAI GWGCWC 1 cut(s) 912
BsiHKCI CYCGRG 2 cut(s) 215, 535
BsiSI CCGG 5 cut(s) 104, 153, 320, 336, 836
BslFI GGGAC 2 cut(s) 390, 818
BslI CCNNNNNNNGG 2 cut(s) 159, 841
BsmFI GGGAC 2 cut(s) 390, 818
BsnI GGCC 5 cut(s) 39, 56, 146, 224, 319
BsoBI CYCGRG 2 cut(s) 215, 535
Bsp1286I GDGCHC 1 cut(s) 912
Bsp1407I TGTACA 1 cut(s) 522
Bsp143I GATC 3 cut(s) 135, 573, 628
BspACI CCGC 3 cut(s) 181, 183, 203
BspANI GGCC 5 cut(s) 39, 56, 146, 224, 319
BspCNI CTCAG 1 cut(s) 613
BspFNI CGCG 1 cut(s) 183
BspHI TCATGA 1 cut(s) 880
BspLI GGNNCC 2 cut(s) 125, 459
BspT107I GGYRCC 1 cut(s) 123
BsrDI GCAATG 3 cut(s) 523, 677, 705
BsrFI RCCGGY 2 cut(s) 319, 335
BsrGI TGTACA 1 cut(s) 522
BsrI ACTGG 1 cut(s) 810
BssAI RCCGGY 2 cut(s) 319, 335
BssECI CCNNGG 4 cut(s) 181, 357, 611, 788
BssMI GATC 3 cut(s) 135, 573, 628
BssNAI GTATAC 1 cut(s) 778
BssNI GRCGYC 3 cut(s) 60, 124, 490
BssT1I CCWWGG 2 cut(s) 357, 611
Bst1107I GTATAC 1 cut(s) 778
Bst2UI CCWGG 4 cut(s) 462, 569, 789, 899
Bst4CI ACNGT 2 cut(s) 31, 508
BstACI GRCGYC 3 cut(s) 60, 124, 490
BstAUI TGTACA 1 cut(s) 522
BstBAI YACGTR 2 cut(s) 52, 120
BstC8I GCNNGC 1 cut(s) 321
BstDEI CTNAG 2 cut(s) 282, 621
BstDSI CCRYGG 1 cut(s) 181
BstF5I GGATG 2 cut(s) 798, 912
BstFNI CGCG 1 cut(s) 183
BstH2I RGCGCY 1 cut(s) 127
BstHHI GCGC 1 cut(s) 126
BstKTI GATC 3 cut(s) 138, 576, 631
BstMBI GATC 3 cut(s) 135, 573, 628
BstMWI GCNNNNNNNGC 2 cut(s) 320, 388
BstNI CCWGG 4 cut(s) 462, 569, 789, 899
BstNSI RCATGY 1 cut(s) 391
BstSCI CCNGG 6 cut(s) 102, 460, 567, 787, 834, 897
BstUI CGCG 1 cut(s) 183
BstX2I RGATCY 1 cut(s) 628
BstYI RGATCY 1 cut(s) 628
BstZ17I GTATAC 1 cut(s) 778
Bsu36I CCTNAGG 1 cut(s) 282
BsuRI GGCC 5 cut(s) 39, 56, 146, 224, 319
BtgI CCRYGG 1 cut(s) 181
BtsCI GGATG 2 cut(s) 798, 912
BtsIMutI CAGTG 2 cut(s) 618, 817
Cac8I GCNNGC 1 cut(s) 321
CciI TCATGA 1 cut(s) 880
CfoI GCGC 1 cut(s) 126
Cfr10I RCCGGY 2 cut(s) 319, 335
Cfr13I GGNCC 3 cut(s) 4, 71, 354
Cfr42I CCGCGG 1 cut(s) 184
CseI GACGC 1 cut(s) 498
CsiI ACCWGGT 2 cut(s) 460, 897
Csp6I GTAC 5 cut(s) 32, 115, 325, 523, 652
CviAII CATG 5 cut(s) 95, 388, 577, 707, 881
CviQI GTAC 5 cut(s) 32, 115, 325, 523, 652
DdeI CTNAG 2 cut(s) 282, 621
DinI GGCGCC 1 cut(s) 125
DpnI GATC 3 cut(s) 137, 575, 630
DpnII GATC 3 cut(s) 135, 573, 628
EaeI YGGCCR 3 cut(s) 54, 144, 317
Ecl136II GAGCTC 1 cut(s) 910
Eco130I CCWWGG 2 cut(s) 357, 611
Eco147I AGGCCT 2 cut(s) 39, 224
Eco24I GRGCYC 1 cut(s) 912
Eco47I GGWCC 3 cut(s) 4, 71, 354
Eco53kI GAGCTC 1 cut(s) 910
Eco57I CTGAAG 4 cut(s) 62, 450, 495, 543
Eco72I CACGTG 2 cut(s) 52, 120
Eco81I CCTNAGG 1 cut(s) 282
Eco88I CYCGRG 2 cut(s) 215, 535
EcoICRI GAGCTC 1 cut(s) 910
EcoO109I RGGNCCY 1 cut(s) 354
EcoRII CCWGG 4 cut(s) 460, 567, 787, 897
EcoT14I CCWWGG 2 cut(s) 357, 611
EcoT38I GRGCYC 1 cut(s) 912
EgeI GGCGCC 1 cut(s) 125
EheI GGCGCC 1 cut(s) 125
ErhI CCWWGG 2 cut(s) 357, 611
FaeI CATG 5 cut(s) 98, 391, 580, 710, 884
FalI AAGNNNNNCTT 2 cut(s) 212, 244
FaqI GGGAC 2 cut(s) 390, 818
FatI CATG 5 cut(s) 94, 387, 576, 706, 880
FauI CCCGC 2 cut(s) 176, 210
FblI GTMKAC 1 cut(s) 777
FokI GGATG 2 cut(s) 805, 899
FriOI GRGCYC 1 cut(s) 912
GlaI GCGC 1 cut(s) 125
GsuI CTGGAG 1 cut(s) 726
HaeII RGCGCY 1 cut(s) 127
HaeIII GGCC 5 cut(s) 39, 56, 146, 224, 319
HapII CCGG 5 cut(s) 104, 153, 320, 336, 836
HgaI GACGC 1 cut(s) 498
HhaI GCGC 1 cut(s) 126
Hin1I GRCGYC 3 cut(s) 60, 124, 490
Hin1II CATG 5 cut(s) 98, 391, 580, 710, 884
Hin6I GCGC 1 cut(s) 124
HinP1I GCGC 1 cut(s) 124
HinfI GANTC 4 cut(s) 99, 192, 590, 725
HpaII CCGG 5 cut(s) 104, 153, 320, 336, 836
HphI GGTGA 1 cut(s) 910
Hpy166II GTNNAC 6 cut(s) 117, 523, 589, 597, 618, 778
Hpy188I TCNGA 6 cut(s) 65, 199, 299, 562, 929, 941
Hpy188III TCNNGA 7 cut(s) 173, 263, 428, 447, 535, 632, 881
Hpy8I GTNNAC 6 cut(s) 117, 523, 589, 597, 618, 778
Hpy99I CGWCG 2 cut(s) 62, 65
HpyAV CCTTC 5 cut(s) 214, 238, 425, 434, 857
HpyCH4III ACNGT 2 cut(s) 31, 508
HpyCH4IV ACGT 3 cut(s) 51, 60, 119
HpyCH4V TGCA 5 cut(s) 257, 343, 677, 682, 815
HpyF10VI GCNNNNNNNGC 2 cut(s) 320, 388
HpyF3I CTNAG 2 cut(s) 282, 621
HpySE526I ACGT 3 cut(s) 51, 60, 119
Hsp92I GRCGYC 3 cut(s) 60, 124, 490
Hsp92II CATG 5 cut(s) 98, 391, 580, 710, 884
HspAI GCGC 1 cut(s) 124
KasI GGCGCC 1 cut(s) 123
KroI GCCGGC 1 cut(s) 319
KroNI GCCGGC 1 cut(s) 321
KspI CCGCGG 1 cut(s) 184
Kzo9I GATC 3 cut(s) 135, 573, 628
LmnI GCTCC 4 cut(s) 51, 175, 311, 745
LweI GCATC 2 cut(s) 256, 487
MabI ACCWGGT 2 cut(s) 460, 897
MaeII ACGT 3 cut(s) 51, 60, 119
MaeIII GTNAC 1 cut(s) 367
MalI GATC 3 cut(s) 137, 575, 630
MboI GATC 3 cut(s) 135, 573, 628
MboII GAAGA 1 cut(s) 638
MflI RGATCY 1 cut(s) 628
MhlI GDGCHC 1 cut(s) 912
MlsI TGGCCA 1 cut(s) 146
MluCI AATT 3 cut(s) 258, 410, 782
MluNI TGGCCA 1 cut(s) 146
Mly113I GGCGCC 1 cut(s) 124
MlyI GAGTC 2 cut(s) 186, 584
MmeI TCCRAC 1 cut(s) 43
MnlI CCTC 9 cut(s) 216, 235, 260, 302, 531, 612, 616, 628, 926
Mox20I TGGCCA 1 cut(s) 146
MroNI GCCGGC 1 cut(s) 319
MscI TGGCCA 1 cut(s) 146
MseI TTAA 1 cut(s) 903
Msp20I TGGCCA 1 cut(s) 146
MspA1I CMGCKG 1 cut(s) 183
MspI CCGG 5 cut(s) 104, 153, 320, 336, 836
MspR9I CCNGG 6 cut(s) 104, 462, 569, 789, 836, 899
MvaI CCWGG 4 cut(s) 462, 569, 789, 899
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 2 cut(s) 320, 388
NaeI GCCGGC 1 cut(s) 321
NarI GGCGCC 1 cut(s) 124
NciI CCSGG 2 cut(s) 104, 836
NdeII GATC 3 cut(s) 135, 573, 628
NgoMIV GCCGGC 1 cut(s) 319
NlaIII CATG 5 cut(s) 98, 391, 580, 710, 884
NlaIV GGNNCC 2 cut(s) 125, 459
NspI RCATGY 1 cut(s) 391
PaeR7I CTCGAG 1 cut(s) 535
PagI TCATGA 1 cut(s) 880
PceI AGGCCT 2 cut(s) 39, 224
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PdiI GCCGGC 1 cut(s) 321
PfeI GAWTC 2 cut(s) 99, 725
PfoI TCCNGGA 2 cut(s) 102, 834
PleI GAGTC 2 cut(s) 186, 584
PluTI GGCGCC 1 cut(s) 127
PmaCI CACGTG 2 cut(s) 52, 120
PmlI CACGTG 2 cut(s) 52, 120
PpsI GAGTC 2 cut(s) 186, 584
Ppu21I YACGTR 2 cut(s) 52, 120
PpuMI RGGWCCY 1 cut(s) 354
Psp124BI GAGCTC 1 cut(s) 912
Psp5II RGGWCCY 1 cut(s) 354
Psp6I CCWGG 4 cut(s) 460, 567, 787, 897
PspCI CACGTG 2 cut(s) 52, 120
PspGI CCWGG 4 cut(s) 460, 567, 787, 897
PspN4I GGNNCC 2 cut(s) 125, 459
PspPI GGNCC 3 cut(s) 4, 71, 354
PspPPI RGGWCCY 1 cut(s) 354
PsuI RGATCY 1 cut(s) 628
RsaI GTAC 5 cut(s) 33, 116, 326, 524, 653
RsaNI GTAC 5 cut(s) 32, 115, 325, 523, 652
SacI GAGCTC 1 cut(s) 912
SacII CCGCGG 1 cut(s) 184
SaqAI TTAA 1 cut(s) 903
Sau3AI GATC 3 cut(s) 135, 573, 628
Sau96I GGNCC 3 cut(s) 4, 71, 354
SchI GAGTC 2 cut(s) 186, 584
ScrFI CCNGG 6 cut(s) 104, 462, 569, 789, 836, 899
SduI GDGCHC 1 cut(s) 912
SexAI ACCWGGT 2 cut(s) 460, 897
SfaNI GCATC 2 cut(s) 256, 487
SfoI GGCGCC 1 cut(s) 125
Sfr274I CTCGAG 1 cut(s) 535
Sfr303I CCGCGG 1 cut(s) 184
SgrBI CCGCGG 1 cut(s) 184
SinI GGWCC 3 cut(s) 4, 71, 354
SlaI CTCGAG 1 cut(s) 535
SmlI CTYRAG 2 cut(s) 535, 632
SmoI CTYRAG 2 cut(s) 535, 632
Sse9I AATT 3 cut(s) 258, 410, 782
SseBI AGGCCT 2 cut(s) 39, 224
SsiI CCGC 3 cut(s) 181, 183, 203
SspDI GGCGCC 1 cut(s) 123
SstI GAGCTC 1 cut(s) 912
StuI AGGCCT 2 cut(s) 39, 224
StyD4I CCNGG 6 cut(s) 102, 460, 567, 787, 834, 897
StyI CCWWGG 2 cut(s) 357, 611
TaaI ACNGT 2 cut(s) 31, 508
TaiI ACGT 3 cut(s) 54, 63, 122
TaqI TCGA 1 cut(s) 536
TasI AATT 3 cut(s) 258, 410, 782
TatI WGTACW 1 cut(s) 522
TfiI GAWTC 2 cut(s) 99, 725
Tru1I TTAA 1 cut(s) 903
Tru9I TTAA 1 cut(s) 903
TscAI CASTG 2 cut(s) 625, 817
TspDTI ATGAA 5 cut(s) 716, 742, 809, 869, 897
TspRI CASTG 2 cut(s) 625, 817
VpaK11BI GGWCC 3 cut(s) 4, 71, 354
XapI RAATTY 1 cut(s) 782
XceI RCATGY 1 cut(s) 391
XhoI CTCGAG 1 cut(s) 535
XmiI GTMKAC 1 cut(s) 777
ZraI GACGTC 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.