RchiOBHm_Chr5g0007841

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
4993551 .. 4995772
2222 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28886

Sequence Viewer

Length: 954 bp
ATGTACCAGAAAATGGACCAGATTCAGCACAAGTACGTAACCGTACATGGCCTGAACCTCCACGTCGCCGACATCGGAACCGGTCCCAATGTGGTCGTGTTCCTGCACGGATTCCCAGAAATCTGGTACTCGTGGCGCCACCAGATGATCGCCGTAGCCACTGCCGGGTTCAGGGCCATCGCGCCCGACTACCGCGGGTACGGACTCTCCGACCCGCCACCCGAACCGGAGAAGACCACCTTCCATGACCTCATCAATGACCTCCTTGGAATTCTCGATGCTTTAGCCATTCCCAAGGTTTTCCTCATTGCGAAAGATTTTGGAGCCCGGCCGGCATACTTGTTTGCCCTTCTGCACCCAGAAAGGGTCTCGGGAGTTGTAACAATGGGAGTTCCATACACACCACCAACAAGTCGTCCCCAATACGATAATTCCCTCCCTGAAGGTTTTTACATCAACAGATGGCAGGAACCTGGCCGGGCAGAAGCTGATTTTGGACGCCTTGATGCAAAAACAGTTGTTCGGAATATTTACATCCTTTTCGCAAGAAGTGAACTACCAATAGCTGCAGAAAACCAGGAGATCATGGACTTGGTGGACTCGTCTACACCTCTTCCCCCATGGTTTACTGAGGAAGATCTTGAAGCATATGGAAAGTTGTACAAGAAATCAGGTTTCCAAACTGCACTGCAAGTTCCATATAGGGTGATTAAGGAAGATTTGGGCATAACCATTGATCCAAGTGTTAAAGTTCCAGTGCTGACTATAATGGGAAACAAGGATTATGTATTCAAATTTCCAGGGATGGCAGATTACATAAACAGTGGAATGTTGAAAGAGTTTGTCCCCGATTTGGAGATTGTATTTCTTCCTGAAGGAACTCATTTTGTTCAAGAACAATTGCCTGAACAGATTAATGAGCTCATCCTCACCTTCCTTGGAAAACACATTTGA

Protein Analysis

317

Amino Acids

35.82

Weight (kDa)

5.2

Isoelectric Point (pI)

42.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 30 - 298 5.3e-27 alpha/beta hydrolase fold
Hydrolase_4 PF12146 31 - 130 1.2e-08 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 32 - 307 3.7e-13 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 135
AccB7I CCANNNNNTGG 1 cut(s) 13
AccI GTMKAC 1 cut(s) 605
AccII CGCG 2 cut(s) 182, 195
AciI CCGC 3 cut(s) 193, 195, 215
AclWI GGATC 1 cut(s) 731
AcoI YGGCCR 2 cut(s) 329, 475
AcsI RAATTY 2 cut(s) 270, 794
AcuI CTGAAG 2 cut(s) 462, 894
AcyI GRCGYC 2 cut(s) 136, 499
AfaI GTAC 6 cut(s) 5, 35, 45, 128, 200, 662
AfiI CCNNNNNNNGG 5 cut(s) 13, 165, 171, 364, 853
AgeI ACCGGT 1 cut(s) 80
AgsI TTSAA 4 cut(s) 644, 793, 835, 893
AjiI CACGTC 1 cut(s) 64
AjnI CCWGG 3 cut(s) 472, 576, 799
AjuI GAANNNNNNNTTGG 2 cut(s) 477, 509
AluBI AGCT 3 cut(s) 488, 566, 922
AluI AGCT 3 cut(s) 488, 566, 922
Alw21I GWGCWC 1 cut(s) 924
Alw26I GTCTC 1 cut(s) 373
AlwI GGATC 1 cut(s) 731
AlwNI CAGNNNCTG 1 cut(s) 488
Ama87I CYCGRG 1 cut(s) 370
AoxI GGCC 4 cut(s) 49, 174, 329, 475
ApeKI GCWGC 1 cut(s) 566
ApoI RAATTY 2 cut(s) 270, 794
AseI ATTAAT 1 cut(s) 915
AsiGI ACCGGT 1 cut(s) 80
AspLEI GCGC 2 cut(s) 138, 184
AspS9I GGNCC 3 cut(s) 16, 83, 174
AsuC2I CCSGG 3 cut(s) 166, 328, 479
AsuHPI GGTGA 2 cut(s) 718, 922
AvaI CYCGRG 1 cut(s) 370
AvaII GGWCC 2 cut(s) 16, 83
BanI GGYRCC 1 cut(s) 135
BanII GRGCYC 2 cut(s) 328, 924
BauI CACGAG 1 cut(s) 130
BbsI GAAGAC 1 cut(s) 239
Bbv12I GWGCWC 1 cut(s) 924
BbvI GCAGC 1 cut(s) 553
BccI CCATC 3 cut(s) 185, 456, 799
BceAI ACGGC 1 cut(s) 137
BciT130I CCWGG 3 cut(s) 474, 578, 801
BcnI CCSGG 3 cut(s) 166, 328, 479
BcoDI GTCTC 1 cut(s) 373
BfmI CTRYAG 1 cut(s) 567
BfoI RGCGCY 1 cut(s) 139
BglI GCCNNNNNGGC 1 cut(s) 332
BglII AGATCT 1 cut(s) 637
BisI GCNGC 1 cut(s) 567
BlsI GCNGC 1 cut(s) 568
Bme1390I CCNGG 6 cut(s) 166, 328, 474, 479, 578, 801
Bme18I GGWCC 2 cut(s) 16, 83
BmeT110I CYCGRG 1 cut(s) 370
BmgBI CACGTC 1 cut(s) 64
BmgT120I GGNCC 3 cut(s) 16, 83, 174
BmiI GGNNCC 5 cut(s) 79, 85, 137, 325, 471
BmrFI CCNGG 6 cut(s) 166, 328, 474, 479, 578, 801
BmsI GCATC 2 cut(s) 268, 496
BpiI GAAGAC 1 cut(s) 239
BpuMI CCSGG 3 cut(s) 166, 328, 479
BsaAI YACGTR 1 cut(s) 37
BsaHI GRCGYC 2 cut(s) 136, 499
BsaI GGTCTC 1 cut(s) 373
BsaJI CCNNGG 6 cut(s) 193, 265, 294, 620, 800, 937
BsaWI WCCGGW 2 cut(s) 80, 226
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bsc4I CCNNNNNNNGG 5 cut(s) 13, 165, 171, 364, 853
Bse118I RCCGGY 2 cut(s) 80, 331
Bse1I ACTGG 1 cut(s) 755
Bse3DI GCAATG 1 cut(s) 306
BseBI CCWGG 3 cut(s) 474, 578, 801
BseDI CCNNGG 6 cut(s) 193, 265, 294, 620, 800, 937
BseGI GGATG 3 cut(s) 534, 810, 924
BseLI CCNNNNNNNGG 5 cut(s) 13, 165, 171, 364, 853
BseMI GCAATG 1 cut(s) 306
BseMII CTCAG 1 cut(s) 621
BseNI ACTGG 1 cut(s) 755
BseX3I CGGCCG 1 cut(s) 329
BseXI GCAGC 1 cut(s) 553
BsgI GTGCAG 3 cut(s) 89, 338, 669
Bsh1236I CGCG 2 cut(s) 182, 195
Bsh1285I CGRYCG 1 cut(s) 332
BshFI GGCC 4 cut(s) 51, 176, 331, 477
BshNI GGYRCC 1 cut(s) 135
BshTI ACCGGT 1 cut(s) 80
BsiEI CGRYCG 1 cut(s) 332
BsiHKAI GWGCWC 1 cut(s) 924
BsiHKCI CYCGRG 1 cut(s) 370
BsiSI CCGG 6 cut(s) 81, 165, 227, 328, 332, 478
BslFI GGGAC 3 cut(s) 69, 402, 830
BslI CCNNNNNNNGG 5 cut(s) 13, 165, 171, 364, 853
BsmAI GTCTC 1 cut(s) 373
BsmFI GGGAC 3 cut(s) 69, 402, 830
BsnI GGCC 4 cut(s) 51, 176, 331, 477
Bso31I GGTCTC 1 cut(s) 373
BsoBI CYCGRG 1 cut(s) 370
Bsp1286I GDGCHC 2 cut(s) 328, 924
Bsp1407I TGTACA 1 cut(s) 660
Bsp143I GATC 4 cut(s) 147, 582, 637, 736
Bsp19I CCATGG 1 cut(s) 620
BspACI CCGC 3 cut(s) 193, 195, 215
BspANI GGCC 4 cut(s) 51, 176, 331, 477
BspCNI CTCAG 1 cut(s) 622
BspFNI CGCG 2 cut(s) 182, 195
BspLI GGNNCC 5 cut(s) 79, 85, 137, 325, 471
BspMAI CTGCAG 1 cut(s) 571
BspPI GGATC 1 cut(s) 731
BspT107I GGYRCC 1 cut(s) 135
BspTNI GGTCTC 1 cut(s) 373
BsrDI GCAATG 1 cut(s) 306
BsrFI RCCGGY 2 cut(s) 80, 331
BsrGI TGTACA 1 cut(s) 660
BsrI ACTGG 1 cut(s) 755
BssAI RCCGGY 2 cut(s) 80, 331
BssECI CCNNGG 6 cut(s) 193, 265, 294, 620, 800, 937
BssMI GATC 4 cut(s) 147, 582, 637, 736
BssNI GRCGYC 2 cut(s) 136, 499
BssSI CACGAG 1 cut(s) 130
BssT1I CCWWGG 4 cut(s) 265, 294, 620, 937
Bst2BI CACGAG 1 cut(s) 130
Bst2UI CCWGG 3 cut(s) 474, 578, 801
Bst4CI ACNGT 3 cut(s) 43, 517, 824
Bst6I CTCTTC 1 cut(s) 618
BstACI GRCGYC 2 cut(s) 136, 499
BstAUI TGTACA 1 cut(s) 660
BstBAI YACGTR 1 cut(s) 37
BstC8I GCNNGC 1 cut(s) 333
BstDEI CTNAG 1 cut(s) 630
BstDSI CCRYGG 2 cut(s) 193, 620
BstF5I GGATG 3 cut(s) 534, 810, 924
BstFNI CGCG 2 cut(s) 182, 195
BstH2I RGCGCY 1 cut(s) 139
BstHHI GCGC 2 cut(s) 138, 184
BstKTI GATC 4 cut(s) 150, 585, 640, 739
BstMAI GTCTC 1 cut(s) 373
BstMBI GATC 4 cut(s) 147, 582, 637, 736
BstMCI CGRYCG 1 cut(s) 332
BstMWI GCNNNNNNNGC 1 cut(s) 332
BstNI CCWGG 3 cut(s) 474, 578, 801
BstSCI CCNGG 6 cut(s) 164, 326, 472, 477, 576, 799
BstSFI CTRYAG 1 cut(s) 567
BstSNI TACGTA 1 cut(s) 37
BstUI CGCG 2 cut(s) 182, 195
BstV1I GCAGC 1 cut(s) 553
BstV2I GAAGAC 1 cut(s) 239
BstX2I RGATCY 1 cut(s) 637
BstXI CCANNNNNNTGG 1 cut(s) 123
BstYI RGATCY 1 cut(s) 637
BstZI CGGCCG 1 cut(s) 329
BsuRI GGCC 4 cut(s) 51, 176, 331, 477
BtgI CCRYGG 2 cut(s) 193, 620
BtgZI GCGATG 1 cut(s) 163
BtrI CACGTC 1 cut(s) 64
BtsCI GGATG 3 cut(s) 534, 810, 924
BtsI GCAGTG 2 cut(s) 159, 686
BtsIMutI CAGTG 4 cut(s) 159, 686, 762, 829
Cac8I GCNNGC 1 cut(s) 333
CaiI CAGNNNCTG 1 cut(s) 488
CfoI GCGC 2 cut(s) 138, 184
Cfr10I RCCGGY 2 cut(s) 80, 331
Cfr13I GGNCC 3 cut(s) 16, 83, 174
Cfr42I CCGCGG 1 cut(s) 196
CseI GACGC 1 cut(s) 507
Csp6I GTAC 6 cut(s) 4, 34, 44, 127, 199, 661
CspAI ACCGGT 1 cut(s) 80
CviAII CATG 4 cut(s) 47, 245, 586, 621
CviQI GTAC 6 cut(s) 4, 34, 44, 127, 199, 661
DdeI CTNAG 1 cut(s) 630
DinI GGCGCC 1 cut(s) 137
DpnI GATC 4 cut(s) 149, 584, 639, 738
DpnII GATC 4 cut(s) 147, 582, 637, 736
EaeI YGGCCR 2 cut(s) 329, 475
EagI CGGCCG 1 cut(s) 329
Eam1104I CTCTTC 1 cut(s) 618
EarI CTCTTC 1 cut(s) 618
Ecl136II GAGCTC 1 cut(s) 922
EclXI CGGCCG 1 cut(s) 329
Eco105I TACGTA 1 cut(s) 37
Eco130I CCWWGG 4 cut(s) 265, 294, 620, 937
Eco24I GRGCYC 2 cut(s) 328, 924
Eco31I GGTCTC 1 cut(s) 373
Eco47I GGWCC 2 cut(s) 16, 83
Eco52I CGGCCG 1 cut(s) 329
Eco53kI GAGCTC 1 cut(s) 922
Eco57I CTGAAG 2 cut(s) 462, 894
Eco88I CYCGRG 1 cut(s) 370
EcoICRI GAGCTC 1 cut(s) 922
EcoRI GAATTC 1 cut(s) 270
EcoRII CCWGG 3 cut(s) 472, 576, 799
EcoT14I CCWWGG 4 cut(s) 265, 294, 620, 937
EcoT38I GRGCYC 2 cut(s) 328, 924
EgeI GGCGCC 1 cut(s) 137
EheI GGCGCC 1 cut(s) 137
ErhI CCWWGG 4 cut(s) 265, 294, 620, 937
FaeI CATG 4 cut(s) 50, 248, 589, 624
FalI AAGNNNNNCTT 2 cut(s) 224, 256
FaqI GGGAC 3 cut(s) 69, 402, 830
FatI CATG 4 cut(s) 46, 244, 585, 620
FauI CCCGC 2 cut(s) 188, 222
FauNDI CATATG 1 cut(s) 649
FblI GTMKAC 1 cut(s) 605
Fnu4HI GCNGC 1 cut(s) 567
FokI GGATG 3 cut(s) 521, 817, 911
FriOI GRGCYC 2 cut(s) 328, 924
Fsp4HI GCNGC 1 cut(s) 567
GlaI GCGC 2 cut(s) 137, 183
GluI GCNGC 1 cut(s) 567
HaeII RGCGCY 1 cut(s) 139
HaeIII GGCC 4 cut(s) 51, 176, 331, 477
HapII CCGG 6 cut(s) 81, 165, 227, 328, 332, 478
HgaI GACGC 1 cut(s) 507
HhaI GCGC 2 cut(s) 138, 184
Hin1I GRCGYC 2 cut(s) 136, 499
Hin1II CATG 4 cut(s) 50, 248, 589, 624
Hin6I GCGC 2 cut(s) 136, 182
HinP1I GCGC 2 cut(s) 136, 182
HinfI GANTC 4 cut(s) 22, 111, 204, 599
HpaII CCGG 6 cut(s) 81, 165, 227, 328, 332, 478
HphI GGTGA 2 cut(s) 718, 922
Hpy166II GTNNAC 4 cut(s) 554, 598, 606, 627
Hpy188I TCNGA 3 cut(s) 77, 211, 525
Hpy188III TCNNGA 5 cut(s) 275, 372, 641, 872, 893
Hpy8I GTNNAC 4 cut(s) 554, 598, 606, 627
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 5 cut(s) 250, 359, 437, 869, 943
HpyCH4III ACNGT 3 cut(s) 43, 517, 824
HpyCH4IV ACGT 2 cut(s) 36, 63
HpyCH4V TGCA 6 cut(s) 106, 355, 509, 569, 686, 691
HpyF10VI GCNNNNNNNGC 1 cut(s) 332
HpyF3I CTNAG 1 cut(s) 630
HpySE526I ACGT 2 cut(s) 36, 63
Hsp92I GRCGYC 2 cut(s) 136, 499
Hsp92II CATG 4 cut(s) 50, 248, 589, 624
HspAI GCGC 2 cut(s) 136, 182
KasI GGCGCC 1 cut(s) 135
KroI GCCGGC 1 cut(s) 331
KroNI GCCGGC 1 cut(s) 333
KspI CCGCGG 1 cut(s) 196
Kzo9I GATC 4 cut(s) 147, 582, 637, 736
LmnI GCTCC 1 cut(s) 323
Lsp1109I GCAGC 1 cut(s) 553
LweI GCATC 2 cut(s) 268, 496
MaeII ACGT 2 cut(s) 36, 63
MaeIII GTNAC 2 cut(s) 37, 379
MalI GATC 4 cut(s) 149, 584, 639, 738
MboI GATC 4 cut(s) 147, 582, 637, 736
MboII GAAGA 5 cut(s) 244, 605, 647, 728, 860
MfeI CAATTG 1 cut(s) 899
MflI RGATCY 1 cut(s) 637
MhlI GDGCHC 2 cut(s) 328, 924
MluCI AATT 4 cut(s) 270, 430, 794, 899
Mly113I GGCGCC 1 cut(s) 136
MlyI GAGTC 2 cut(s) 198, 593
MmeI TCCRAC 1 cut(s) 234
MnlI CCTC 8 cut(s) 68, 260, 272, 314, 446, 621, 625, 938
MroNI GCCGGC 1 cut(s) 331
MseI TTAA 3 cut(s) 711, 747, 915
MspA1I CMGCKG 1 cut(s) 195
MspI CCGG 6 cut(s) 81, 165, 227, 328, 332, 478
MspR9I CCNGG 6 cut(s) 166, 328, 474, 479, 578, 801
MunI CAATTG 1 cut(s) 899
MvaI CCWGG 3 cut(s) 474, 578, 801
MvnI CGCG 2 cut(s) 182, 195
MwoI GCNNNNNNNGC 1 cut(s) 332
NaeI GCCGGC 1 cut(s) 333
NarI GGCGCC 1 cut(s) 136
NciI CCSGG 3 cut(s) 166, 328, 479
NcoI CCATGG 1 cut(s) 620
NdeI CATATG 1 cut(s) 649
NdeII GATC 4 cut(s) 147, 582, 637, 736
NgoMIV GCCGGC 1 cut(s) 331
NlaIII CATG 4 cut(s) 50, 248, 589, 624
NlaIV GGNNCC 5 cut(s) 79, 85, 137, 325, 471
PcsI WCGNNNNNNNCGW 1 cut(s) 207
PdiI GCCGGC 1 cut(s) 333
PfeI GAWTC 2 cut(s) 22, 111
PflMI CCANNNNNTGG 1 cut(s) 13
PinAI ACCGGT 1 cut(s) 80
PkrI GCNGC 1 cut(s) 568
PleI GAGTC 2 cut(s) 198, 593
PluTI GGCGCC 1 cut(s) 139
PpsI GAGTC 2 cut(s) 198, 593
Ppu21I YACGTR 1 cut(s) 37
PshBI ATTAAT 1 cut(s) 915
Psp124BI GAGCTC 1 cut(s) 924
Psp6I CCWGG 3 cut(s) 472, 576, 799
PspGI CCWGG 3 cut(s) 472, 576, 799
PspN4I GGNNCC 5 cut(s) 79, 85, 137, 325, 471
PspPI GGNCC 3 cut(s) 16, 83, 174
PstI CTGCAG 1 cut(s) 571
PstNI CAGNNNCTG 1 cut(s) 488
PsuI RGATCY 1 cut(s) 637
RsaI GTAC 6 cut(s) 5, 35, 45, 128, 200, 662
RsaNI GTAC 6 cut(s) 4, 34, 44, 127, 199, 661
SacI GAGCTC 1 cut(s) 924
SacII CCGCGG 1 cut(s) 196
SaqAI TTAA 3 cut(s) 711, 747, 915
SatI GCNGC 1 cut(s) 567
Sau3AI GATC 4 cut(s) 147, 582, 637, 736
Sau96I GGNCC 3 cut(s) 16, 83, 174
SchI GAGTC 2 cut(s) 198, 593
ScrFI CCNGG 6 cut(s) 166, 328, 474, 479, 578, 801
SduI GDGCHC 2 cut(s) 328, 924
SfaNI GCATC 2 cut(s) 268, 496
SfcI CTRYAG 1 cut(s) 567
SfoI GGCGCC 1 cut(s) 137
Sfr303I CCGCGG 1 cut(s) 196
SgrBI CCGCGG 1 cut(s) 196
SinI GGWCC 2 cut(s) 16, 83
SnaBI TACGTA 1 cut(s) 37
Sse9I AATT 4 cut(s) 270, 430, 794, 899
SsiI CCGC 3 cut(s) 193, 195, 215
SspDI GGCGCC 1 cut(s) 135
SspI AATATT 1 cut(s) 529
SstI GAGCTC 1 cut(s) 924
StyD4I CCNGG 6 cut(s) 164, 326, 472, 477, 576, 799
StyI CCWWGG 4 cut(s) 265, 294, 620, 937
TaaI ACNGT 3 cut(s) 43, 517, 824
TaiI ACGT 2 cut(s) 39, 66
TaqI TCGA 1 cut(s) 276
TasI AATT 4 cut(s) 270, 430, 794, 899
TatI WGTACW 1 cut(s) 660
TfiI GAWTC 2 cut(s) 22, 111
Tru1I TTAA 3 cut(s) 711, 747, 915
Tru9I TTAA 3 cut(s) 711, 747, 915
TscAI CASTG 4 cut(s) 166, 693, 762, 829
TseI GCWGC 1 cut(s) 566
TspGWI ACGGA 2 cut(s) 123, 216
TspRI CASTG 4 cut(s) 166, 693, 762, 829
Van91I CCANNNNNTGG 1 cut(s) 13
VpaK11BI GGWCC 2 cut(s) 16, 83
VspI ATTAAT 1 cut(s) 915
XapI RAATTY 2 cut(s) 270, 794
XmiI GTMKAC 1 cut(s) 605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.