Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002327

Physical Location & Seq

Genomic Coordinates Reverse (-)

23492512 .. 23498314

Gene Structure 5803 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g30290.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGTGGAACTCACGCGCTCCGCTCTTCGTACTCGCTGCTCTTCTCTTCTACTCACTAGCTCTCGTCTCTGCTCAGGGATCTAGTCCATGGAAAACTCTCACTGGAGATCCGCCTTTGGTCATAGCAAGAGGGGGATTTTCAGGACTCTTTCCTGGTTTCAGTTCCGCAGCATACAATTTGGCATTGATCACTAGTGTACCAGATGTGGTATTATATTGTGATGTCCAACTTACAAAGGAAGCAGCTGGAATATGCTTTCCGGATCTGCTGCTGAATAACAGTTCGAATGTTGATCAAGTTTTTGAAAAGAAGGAAAAGACTTACCCGGTTAATGGATTTCCCACTAAAGGGTCGTTTAGCATTGACTATAGTCTCAAGGACCTTGCAAATATTTTTGTTACTCAGGGAGTATATTCTCGATCGAACAAGTTTGATGGCAATATGTACCCAATTCTTACCGTAGAAGATGTGGCTATGCAATTCAGACCACCAGGCTTATGGTTGAATATTGAGAACAATATATTCTTCTCGCAACACAACTTGAGTATGAGAAACTATGTGCTCTCTGTATCCAAAAAAGTGGTTGTCAATTTCATCTCATCACCAGAGGTGGATTTCCTGAACAGTATTAAAGCACGTGTTAGTCCAACCACAACAAAGTTGATCTTTAAGTTTCTTGATGAAGCTGAGATTGAGCCTTCAACAAACCAGACTTATGGTTCTCTATTGAAGAATCTCACATTTATCAAGACATTTGCCTCTGGAATTATAGTTCCTAAAACTTACATATGGCCTGTCACTGTGGACAATTATTTAAAACCTCACACTTCCATTGTCTCGGATGCTCATAAAGCAGGGTTGACAGTATTTGCGTCAGAATTGTACAATGATGTGCCATTCCCCTTCAATTACAGTTACGATCCAGTTTCTGAGTACCTGTCATTCTTCGACAACGGTGATTTCAGTGTTGACGGTGTGCTGTCTGACTTTCCCTTAACTCCATCAGCAGCCATAGATTGTTATGCTCACCCAGAAAAGAATGCTTCAGTACCAGCTACACCTTTGGTTATCTCGAAAGACGGAGCAAGCGGAGACTACCCTGGCTGTACTGACTTGGCGTATATGCATGCAATTACAGATGGTGTAGATGTACTTGATTGTAACGTCCAAATGTCCAAGGATGGGATACCATTTTGCTCGAGCTCTATAAATCTTATTGATAGCACGACAGTTGCTCAATCGCCTTTTAACAACTACACAATGGTTGTTCCGGAAATTAAGGTTGGCAGTGGAATATATACCTTTAGTCTGACATGGGATCAGATCAAAAAACTAACACCAACTATATCAAGCCCACAGAAAGATTTCACGTTGTACAGGAATCCAAGGTTTAAAAGTGCTGGGACTTACTTGAAACTATCTGAATTTTTGACCTTGGCGAAGAATTCAAGTTCCCTATCTGGTGTCATAATCGGCATAGAGTATGCGGCGTATCTTATAGAGAAGAAGGGGTTAAGTGTAACAGATGCAGTCATTACTGAGTTAAACAAAGCTGGTTTTGGTAATCAGACAGCCCTAGATGTCATGATTCAGTCCACTAATAGTTCTGTTCTGATGAAGTTTAAGGAGAAAACCAAGTATAAACTTGTTTACGAGATTGAAGAGGATATTGGTGGTGCCCCTGACAAAACTGTTCAGGACATCAAGAAGTTTGCCAATGCTGTGGTCATCAAAAAGACCTCTGTCTTTCCAGAAAATCAGGAATTCGTCACTGGAGTAACCGATGTCGTAACGAAGCTTCAGGGATTTAAAATACCTATATATGTTGAACTCTTCAGCAATGAGTTTGTATCTCAAGCATGGGACTTCTTCTCAGATCCATCTGTGGAGATCAATTCATTTGTGACCGGCCCCGTTATTGATGGTGTTATCACAGACTTCCCCAAAACGGCTGCTCGATACAAAAGAAACCGGTGTTTAAGTTATAAAGAGACACCTGCCTACATGAGCCCTGTTCAGCCAGGCAGTCTGATACAAGTTATTTCTTCTGTTTACATGCCACCTGCTGAGGCTCCAAAGCCATACCTGACAGAGAGTGATGTGATTGAGCCGCCTTTGCCATCCGCAGAAACAGCCTTAGCTCCCGGGCCAGCCGCTGGATCTGCAGTATCACCACCACCGCCGAATGGGCAGCCTAAGACTGCTGCGTGCTTCCTTCTCTCTACTCTGGCTATGCTATTTACCTGCCTTTTTCTTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006968 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008889 GO:0009505 GO:0009506 GO:0009653 GO:0009664 GO:0009791 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010016 GO:0010026 GO:0010052 GO:0010053 GO:0010054 GO:0010103 GO:0010374 GO:0010383 GO:0010441 GO:0010442 GO:0016020 GO:0016043 GO:0016049 GO:0016787 GO:0016788 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030243 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0046872 GO:0048364 GO:0048367 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0052541 GO:0055044 GO:0060560 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

GDPD

Protein Analysis

754

Amino Acids

82.38

Weight (kDa)

5.12

Isoelectric Point (pI)

43.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDPD	PF03009	214 - 503	2.8e-21	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66970 AT1G66970 AT1G66970 AT4G26690
fragaria_vesca	FvH4_3g13670 FvH4_3g13670 FvH4_3g13670 FvH4_3g30290 FvH4_3g30290
malus_domestica	MD03G1190400.v1.1 MD11G1207100.v1.1
prunus_persica	Prupe.4G228400_v2.0.a1 Prupe.4G228400_v2.0.a1
pyrus_communis	pycom03g14330 pycom03g14370 pycom11g18010
rosa_chinensis	RchiOBHm_Chr5g0022921 RchiOBHm_Chr5g0056171
rosa_laevigata	RLG00000032682 RLG00000035057 RLG00000035060
rosa_multiflora	Rmu_sc0000680.1_g000027 Rmu_sc0001787.1_g000024 Rmu_sc0002675.1_g000001
rosa_roxburghii	Rroxscaffold_1G00024130 Rroxscaffold_1G00056420
rosa_rugosa	Rorug05G0075500 Rorug05G0297800 Rorug05G0297800
rosa_samantha	Rh5AG162000 Rh5AG368900 Rh5BG161200 Rh5BG379900 Rh5CG175800 Rh5CG402700 Rh5DG162500 Rh5DG392700 Rh5DG392900
rosa_wichuraiana	Rw0G004450 Rw0G012690 Rw5G014580 Rw5G034630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1986
AarI	CACCTGC	2 cut(s)	2005, 2071
Acc36I	ACCTGC	3 cut(s)	2005, 2071, 2252
AccB1I	GGYRCC	1 cut(s)	1676
AccB7I	CCANNNNNTGG	1 cut(s)	2156
AccBSI	CCGCTC	1 cut(s)	22
AccII	CGCG	1 cut(s)	15
AccIII	TCCGGA	2 cut(s)	259, 1270
AciI	CCGC	9 cut(s)	20, 110, 165, 1089, 1487, 2111, 2124, 2154, 2180
AclWI	GGATC	7 cut(s)	85, 101, 270, 914, 1326, 1871, 2167
AcsI	RAATTY	3 cut(s)	1424, 1444, 1763
AcuI	CTGAAG	3 cut(s)	1029, 1784, 1819
AcvI	CACGTG	1 cut(s)	638
AfaI	GTAC	9 cut(s)	30, 198, 446, 884, 935, 1050, 1108, 1152, 1376
AfiI	CCNNNNNNNGG	7 cut(s)	332, 347, 348, 1182, 1948, 2156, 2186
AflIII	ACRYGT	1 cut(s)	637
AgeI	ACCGGT	1 cut(s)	1971
AgsI	TTSAA	9 cut(s)	305, 505, 702, 730, 907, 1414, 1449, 1661, 1829
AhlI	ACTAGT	1 cut(s)	191
AjnI	CCWGG	4 cut(s)	151, 490, 1099, 2020
AjuI	GAANNNNNNNTTGG	4 cut(s)	1266, 1298, 1653, 1685
AloI	GAACNNNNNNTCC	2 cut(s)	756, 788
AluBI	AGCT	8 cut(s)	59, 245, 686, 1055, 1203, 1553, 1798, 2141
AluI	AGCT	8 cut(s)	59, 245, 686, 1055, 1203, 1553, 1798, 2141
Alw21I	GWGCWC	2 cut(s)	564, 1205
Alw26I	GTCTC	5 cut(s)	70, 377, 841, 1086, 1985
AlwI	GGATC	7 cut(s)	85, 101, 270, 914, 1326, 1871, 2167
AlwNI	CAGNNNCTG	2 cut(s)	929, 2156
Ama87I	CYCGRG	2 cut(s)	1198, 2144
Aor13HI	TCCGGA	2 cut(s)	259, 1270
AoxI	GGCC	3 cut(s)	791, 1909, 2147
ApeKI	GCWGC	8 cut(s)	35, 167, 242, 268, 1007, 1952, 2191, 2204
ApoI	RAATTY	3 cut(s)	1424, 1444, 1763
AsiGI	ACCGGT	1 cut(s)	1971
Asp700I	GAANNNNTTC	1 cut(s)	1364
AspLEI	GCGC	1 cut(s)	17
AspS9I	GGNCC	3 cut(s)	379, 1910, 2147
AsuC2I	CCSGG	3 cut(s)	326, 2145, 2146
AsuHPI	GGTGA	4 cut(s)	594, 968, 1019, 2163
AsuII	TTCGAA	1 cut(s)	284
AvaI	CYCGRG	2 cut(s)	1198, 2144
AvaII	GGWCC	1 cut(s)	379
BaeGI	GKGCMC	1 cut(s)	1681
BaeI	ACNNNNGTAYC	2 cut(s)	180, 213
BanI	GGYRCC	1 cut(s)	1676
BanII	GRGCYC	2 cut(s)	1205, 2012
BarI	GAAGNNNNNNTAC	2 cut(s)	1782, 1814
BbrPI	CACGTG	1 cut(s)	638
Bbv12I	GWGCWC	2 cut(s)	564, 1205
BbvCI	CCTCAGC	1 cut(s)	2067
BbvI	GCAGC	8 cut(s)	22, 179, 254, 255, 1019, 1939, 2191, 2203
BccI	CCATC	7 cut(s)	428, 1009, 1133, 1175, 1888, 1916, 2128
BceAI	ACGGC	1 cut(s)	1965
BciT130I	CCWGG	4 cut(s)	153, 492, 1101, 2022
BciVI	GTATCC	2 cut(s)	580, 1179
BclI	TGATCA	2 cut(s)	186, 292
BcnI	CCSGG	3 cut(s)	326, 2145, 2146
BcoDI	GTCTC	5 cut(s)	70, 377, 841, 1086, 1985
BcuI	ACTAGT	1 cut(s)	191
BfaI	CTAG	4 cut(s)	56, 81, 192, 1577
BfmI	CTRYAG	2 cut(s)	367, 2163
BfuAI	ACCTGC	3 cut(s)	2005, 2071, 2252
BfuI	GTATCC	2 cut(s)	580, 1179
BglI	GCCNNNNNGGC	1 cut(s)	2188
Bme1390I	CCNGG	7 cut(s)	153, 326, 492, 1101, 2022, 2145, 2146
Bme18I	GGWCC	1 cut(s)	379
BmeT110I	CYCGRG	2 cut(s)	1198, 2144
BmgT120I	GGNCC	3 cut(s)	379, 1910, 2147
BmiI	GGNNCC	3 cut(s)	1678, 1912, 2073
BmrFI	CCNGG	7 cut(s)	153, 326, 492, 1101, 2022, 2145, 2146
BmsI	GCATC	2 cut(s)	832, 1516
BoxI	GACNNNNGTC	2 cut(s)	369, 1742
BpmI	CTGGAG	2 cut(s)	123, 1794
Bpu10I	CCTNAGC	3 cut(s)	72, 2067, 2137
Bpu14I	TTCGAA	1 cut(s)	284
BpuEI	CTTGAG	3 cut(s)	359, 562, 1839
BpuMI	CCSGG	3 cut(s)	326, 2145, 2146
BsaAI	YACGTR	1 cut(s)	638
BsaJI	CCNNGG	6 cut(s)	86, 1099, 1176, 1385, 1434, 2144
BsaWI	WCCGGW	3 cut(s)	259, 1270, 1971
Bsc4I	CCNNNNNNNGG	7 cut(s)	332, 347, 348, 1182, 1948, 2156, 2186
Bse118I	RCCGGY	2 cut(s)	1907, 1971
Bse1I	ACTGG	3 cut(s)	106, 923, 1777
Bse3DI	GCAATG	1 cut(s)	1846
BseAI	TCCGGA	2 cut(s)	259, 1270
BseBI	CCWGG	4 cut(s)	153, 492, 1101, 2022
BseDI	CCNNGG	6 cut(s)	86, 1099, 1176, 1385, 1434, 2144
BseGI	GGATG	3 cut(s)	847, 1186, 2120
BseLI	CCNNNNNNNGG	7 cut(s)	332, 347, 348, 1182, 1948, 2156, 2186
BseMI	GCAATG	1 cut(s)	1846
BseMII	CTCAG	7 cut(s)	86, 416, 678, 921, 1530, 1887, 2058
BseNI	ACTGG	3 cut(s)	106, 923, 1777
BseSI	GKGCMC	1 cut(s)	1681
BseXI	GCAGC	8 cut(s)	22, 179, 254, 255, 1019, 1939, 2191, 2203
BseYI	CCCAGC	1 cut(s)	1400
Bsh1236I	CGCG	1 cut(s)	15
Bsh1285I	CGRYCG	1 cut(s)	422
BshFI	GGCC	3 cut(s)	793, 1911, 2149
BshNI	GGYRCC	1 cut(s)	1676
BshTI	ACCGGT	1 cut(s)	1971
BsiEI	CGRYCG	1 cut(s)	422
BsiHKAI	GWGCWC	2 cut(s)	564, 1205
BsiHKCI	CYCGRG	2 cut(s)	1198, 2144
BsiSI	CCGG	6 cut(s)	260, 326, 1271, 1908, 1972, 2145
BslFI	GGGAC	2 cut(s)	1417, 1877
BslI	CCNNNNNNNGG	7 cut(s)	332, 347, 348, 1182, 1948, 2156, 2186
BsmAI	GTCTC	5 cut(s)	70, 377, 841, 1086, 1985
BsmBI	CGTCTC	1 cut(s)	70
BsmFI	GGGAC	2 cut(s)	1417, 1877
BsmI	GAATGC	1 cut(s)	1045
BsnI	GGCC	3 cut(s)	793, 1911, 2149
BsoBI	CYCGRG	2 cut(s)	1198, 2144
Bsp119I	TTCGAA	1 cut(s)	284
Bsp1286I	GDGCHC	4 cut(s)	564, 1205, 1681, 2012
Bsp13I	TCCGGA	2 cut(s)	259, 1270
Bsp1407I	TGTACA	2 cut(s)	882, 1374
Bsp19I	CCATGG	1 cut(s)	86
BspACI	CCGC	9 cut(s)	20, 110, 165, 1089, 1487, 2111, 2124, 2154, 2180
BspANI	GGCC	3 cut(s)	793, 1911, 2149
BspCNI	CTCAG	7 cut(s)	85, 415, 679, 922, 1531, 1886, 2059
BspEI	TCCGGA	2 cut(s)	259, 1270
BspFNI	CGCG	1 cut(s)	15
BspHI	TCATGA	1 cut(s)	1584
BspLI	GGNNCC	3 cut(s)	1678, 1912, 2073
BspMAI	CTGCAG	1 cut(s)	2167
BspMI	ACCTGC	3 cut(s)	2005, 2071, 2252
BspPI	GGATC	7 cut(s)	85, 101, 270, 914, 1326, 1871, 2167
BspQI	GCTCTTC	2 cut(s)	29, 45
BspT104I	TTCGAA	1 cut(s)	284
BspT107I	GGYRCC	1 cut(s)	1676
BsrBI	CCGCTC	1 cut(s)	22
BsrDI	GCAATG	1 cut(s)	1846
BsrFI	RCCGGY	2 cut(s)	1907, 1971
BsrGI	TGTACA	2 cut(s)	882, 1374
BsrI	ACTGG	3 cut(s)	106, 923, 1777
BssAI	RCCGGY	2 cut(s)	1907, 1971
BssECI	CCNNGG	6 cut(s)	86, 1099, 1176, 1385, 1434, 2144
BssT1I	CCWWGG	4 cut(s)	86, 1176, 1385, 1434
Bst2UI	CCWGG	4 cut(s)	153, 492, 1101, 2022
Bst6I	CTCTTC	5 cut(s)	29, 45, 50, 1656, 1838
BstAUI	TGTACA	2 cut(s)	882, 1374
BstBAI	YACGTR	1 cut(s)	638
BstBI	TTCGAA	1 cut(s)	284
BstC8I	GCNNGC	4 cut(s)	1087, 1128, 2151, 2209
BstDEI	CTNAG	9 cut(s)	72, 402, 687, 930, 1539, 1873, 2067, 2137, 2196
BstDSI	CCRYGG	1 cut(s)	86
BstF5I	GGATG	3 cut(s)	847, 1186, 2120
BstFNI	CGCG	1 cut(s)	15
BstHHI	GCGC	1 cut(s)	17
BstMAI	GTCTC	5 cut(s)	70, 377, 841, 1086, 1985
BstMCI	CGRYCG	1 cut(s)	422
BstMWI	GCNNNNNNNGC	5 cut(s)	851, 2116, 2132, 2162, 2188
BstNI	CCWGG	4 cut(s)	153, 492, 1101, 2022
BstNSI	RCATGY	2 cut(s)	1130, 2059
BstPAI	GACNNNNGTC	2 cut(s)	369, 1742
BstSCI	CCNGG	7 cut(s)	151, 324, 490, 1099, 2020, 2143, 2144
BstSFI	CTRYAG	2 cut(s)	367, 2163
BstSLI	GKGCMC	1 cut(s)	1681
BstUI	CGCG	1 cut(s)	15
BstV1I	GCAGC	8 cut(s)	22, 179, 254, 255, 1019, 1939, 2191, 2203
BstX2I	RGATCY	5 cut(s)	77, 106, 262, 1876, 2159
BstXI	CCANNNNNNTGG	4 cut(s)	498, 580, 716, 1723
BstYI	RGATCY	5 cut(s)	77, 106, 262, 1876, 2159
BsuI	GTATCC	2 cut(s)	580, 1179
BsuRI	GGCC	3 cut(s)	793, 1911, 2149
BtgI	CCRYGG	1 cut(s)	86
BtsCI	GGATG	3 cut(s)	847, 1186, 2120
BtsI	GCAGTG	1 cut(s)	1294
BtsIMutI	CAGTG	5 cut(s)	99, 798, 970, 1294, 1770
BveI	ACCTGC	3 cut(s)	2005, 2071, 2252
Cac8I	GCNNGC	4 cut(s)	1087, 1128, 2151, 2209
CaiI	CAGNNNCTG	2 cut(s)	929, 2156
CciI	TCATGA	1 cut(s)	1584
CfoI	GCGC	1 cut(s)	17
Cfr10I	RCCGGY	2 cut(s)	1907, 1971
Cfr13I	GGNCC	3 cut(s)	379, 1910, 2147
Cfr9I	CCCGGG	1 cut(s)	2144
CseI	GACGC	1 cut(s)	861
Csp6I	GTAC	9 cut(s)	29, 197, 445, 883, 934, 1049, 1107, 1151, 1375
CspAI	ACCGGT	1 cut(s)	1971
CviAII	CATG	7 cut(s)	87, 1127, 1314, 1585, 1860, 2005, 2056
CviQI	GTAC	9 cut(s)	29, 197, 445, 883, 934, 1049, 1107, 1151, 1375
DdeI	CTNAG	9 cut(s)	72, 402, 687, 930, 1539, 1873, 2067, 2137, 2196
DraI	TTTAAA	3 cut(s)	816, 1393, 1810
Eam1104I	CTCTTC	5 cut(s)	29, 45, 50, 1656, 1838
EarI	CTCTTC	5 cut(s)	29, 45, 50, 1656, 1838
EciI	GGCGGA	1 cut(s)	99
Ecl136II	GAGCTC	1 cut(s)	1203
Eco130I	CCWWGG	4 cut(s)	86, 1176, 1385, 1434
Eco24I	GRGCYC	2 cut(s)	1205, 2012
Eco47I	GGWCC	1 cut(s)	379
Eco53kI	GAGCTC	1 cut(s)	1203
Eco57I	CTGAAG	3 cut(s)	1029, 1784, 1819
Eco72I	CACGTG	1 cut(s)	638
Eco88I	CYCGRG	2 cut(s)	1198, 2144
EcoICRI	GAGCTC	1 cut(s)	1203
EcoO109I	RGGNCCY	1 cut(s)	379
EcoRI	GAATTC	2 cut(s)	1444, 1763
EcoRII	CCWGG	4 cut(s)	151, 490, 1099, 2020
EcoT14I	CCWWGG	4 cut(s)	86, 1176, 1385, 1434
EcoT22I	ATGCAT	1 cut(s)	1128
EcoT38I	GRGCYC	2 cut(s)	1205, 2012
ErhI	CCWWGG	4 cut(s)	86, 1176, 1385, 1434
Esp3I	CGTCTC	1 cut(s)	70
FaeI	CATG	7 cut(s)	90, 1130, 1317, 1588, 1863, 2008, 2059
FalI	AAGNNNNNCTT	2 cut(s)	650, 682
FaqI	GGGAC	2 cut(s)	1417, 1877
FatI	CATG	7 cut(s)	86, 1126, 1313, 1584, 1859, 2004, 2055
FauNDI	CATATG	1 cut(s)	788
FbaI	TGATCA	2 cut(s)	186, 292
FokI	GGATG	3 cut(s)	854, 1193, 2107
FriOI	GRGCYC	2 cut(s)	1205, 2012
FspBI	CTAG	4 cut(s)	56, 81, 192, 1577
GlaI	GCGC	1 cut(s)	16
GsaI	CCCAGC	1 cut(s)	1404
GsuI	CTGGAG	2 cut(s)	123, 1794
HaeIII	GGCC	3 cut(s)	793, 1911, 2149
HapII	CCGG	6 cut(s)	260, 326, 1271, 1908, 1972, 2145
HgaI	GACGC	1 cut(s)	861
HhaI	GCGC	1 cut(s)	17
Hin1II	CATG	7 cut(s)	90, 1130, 1317, 1588, 1863, 2008, 2059
Hin6I	GCGC	1 cut(s)	15
HinP1I	GCGC	1 cut(s)	15
HincII	GTYRAC	2 cut(s)	861, 970
HindII	GTYRAC	2 cut(s)	861, 970
HindIII	AAGCTT	1 cut(s)	1796
HinfI	GANTC	4 cut(s)	144, 733, 1381, 1588
HpaII	CCGG	6 cut(s)	260, 326, 1271, 1908, 1972, 2145
HphI	GGTGA	4 cut(s)	594, 968, 1019, 2163
Hpy166II	GTNNAC	7 cut(s)	197, 805, 861, 970, 1596, 1651, 2053
Hpy8I	GTNNAC	7 cut(s)	197, 805, 861, 970, 1596, 1651, 2053
HpyAV	CCTTC	5 cut(s)	304, 708, 913, 1501, 2225
HpyCH4IV	ACGT	3 cut(s)	637, 1164, 1370
HpyCH4V	TGCA	6 cut(s)	386, 478, 1126, 1130, 1529, 2165
HpyF10VI	GCNNNNNNNGC	5 cut(s)	851, 2116, 2132, 2162, 2188
HpyF3I	CTNAG	9 cut(s)	72, 402, 687, 930, 1539, 1873, 2067, 2137, 2196
HpySE526I	ACGT	3 cut(s)	637, 1164, 1370
Hsp92II	CATG	7 cut(s)	90, 1130, 1317, 1588, 1863, 2008, 2059
HspAI	GCGC	1 cut(s)	15
Kpn2I	TCCGGA	2 cut(s)	259, 1270
Ksp22I	TGATCA	2 cut(s)	186, 292
LguI	GCTCTTC	2 cut(s)	29, 45
LmnI	GCTCC	4 cut(s)	22, 1082, 2077, 2146
Lsp1109I	GCAGC	8 cut(s)	22, 179, 254, 255, 1019, 1939, 2191, 2203
LweI	GCATC	2 cut(s)	832, 1516
MaeI	CTAG	4 cut(s)	56, 81, 192, 1577
MaeII	ACGT	3 cut(s)	637, 1164, 1370
MaeIII	GTNAC	9 cut(s)	397, 796, 914, 1160, 1519, 1768, 1777, 1789, 1903
MbiI	CCGCTC	1 cut(s)	22
MflI	RGATCY	5 cut(s)	77, 106, 262, 1876, 2159
MhlI	GDGCHC	4 cut(s)	564, 1205, 1681, 2012
MlyI	GAGTC	1 cut(s)	138
MmeI	TCCRAC	2 cut(s)	250, 671
MnlI	CCTC	7 cut(s)	122, 601, 769, 831, 1657, 1750, 2062
Mph1103I	ATGCAT	1 cut(s)	1128
MroI	TCCGGA	2 cut(s)	259, 1270
MroXI	GAANNNNTTC	1 cut(s)	1364
MspA1I	CMGCKG	2 cut(s)	245, 2156
MspI	CCGG	6 cut(s)	260, 326, 1271, 1908, 1972, 2145
MspR9I	CCNGG	7 cut(s)	153, 326, 492, 1101, 2022, 2145, 2146
Mva1269I	GAATGC	1 cut(s)	1045
MvaI	CCWGG	4 cut(s)	153, 492, 1101, 2022
MvnI	CGCG	1 cut(s)	15
MwoI	GCNNNNNNNGC	5 cut(s)	851, 2116, 2132, 2162, 2188
NciI	CCSGG	3 cut(s)	326, 2145, 2146
NcoI	CCATGG	1 cut(s)	86
NdeI	CATATG	1 cut(s)	788
NlaIII	CATG	7 cut(s)	90, 1130, 1317, 1588, 1863, 2008, 2059
NlaIV	GGNNCC	3 cut(s)	1678, 1912, 2073
NmuCI	GTSAC	3 cut(s)	796, 1768, 1903
NsiI	ATGCAT	1 cut(s)	1128
NspI	RCATGY	2 cut(s)	1130, 2059
NspV	TTCGAA	1 cut(s)	284
PaeI	GCATGC	1 cut(s)	1130
PaeR7I	CTCGAG	1 cut(s)	1198
PagI	TCATGA	1 cut(s)	1584
PaqCI	CACCTGC	2 cut(s)	2005, 2071
PciSI	GCTCTTC	2 cut(s)	29, 45
PctI	GAATGC	1 cut(s)	1045
PdmI	GAANNNNTTC	1 cut(s)	1364
PfeI	GAWTC	3 cut(s)	733, 1381, 1588
PflMI	CCANNNNNTGG	1 cut(s)	2156
PinAI	ACCGGT	1 cut(s)	1971
Ple19I	CGATCG	1 cut(s)	422
PleI	GAGTC	1 cut(s)	138
PmaCI	CACGTG	1 cut(s)	638
PmlI	CACGTG	1 cut(s)	638
PpsI	GAGTC	1 cut(s)	138
Ppu21I	YACGTR	1 cut(s)	638
PpuMI	RGGWCCY	1 cut(s)	379
PshAI	GACNNNNGTC	2 cut(s)	369, 1742
PsiI	TTATAA	1 cut(s)	1986
Psp124BI	GAGCTC	1 cut(s)	1205
Psp5II	RGGWCCY	1 cut(s)	379
Psp6I	CCWGG	4 cut(s)	151, 490, 1099, 2020
PspCI	CACGTG	1 cut(s)	638
PspFI	CCCAGC	1 cut(s)	1400
PspGI	CCWGG	4 cut(s)	151, 490, 1099, 2020
PspN4I	GGNNCC	3 cut(s)	1678, 1912, 2073
PspPI	GGNCC	3 cut(s)	379, 1910, 2147
PspPPI	RGGWCCY	1 cut(s)	379
PspXI	VCTCGAGB	1 cut(s)	1198
PstI	CTGCAG	1 cut(s)	2167
PstNI	CAGNNNCTG	2 cut(s)	929, 2156
PsuI	RGATCY	5 cut(s)	77, 106, 262, 1876, 2159
PvuI	CGATCG	1 cut(s)	422
PvuII	CAGCTG	1 cut(s)	245
RsaI	GTAC	9 cut(s)	30, 198, 446, 884, 935, 1050, 1108, 1152, 1376
RsaNI	GTAC	9 cut(s)	29, 197, 445, 883, 934, 1049, 1107, 1151, 1375
SacI	GAGCTC	1 cut(s)	1205
SapI	GCTCTTC	2 cut(s)	29, 45
Sau96I	GGNCC	3 cut(s)	379, 1910, 2147
SchI	GAGTC	1 cut(s)	138
ScrFI	CCNGG	7 cut(s)	153, 326, 492, 1101, 2022, 2145, 2146
SduI	GDGCHC	4 cut(s)	564, 1205, 1681, 2012
SfaNI	GCATC	2 cut(s)	832, 1516
SfcI	CTRYAG	2 cut(s)	367, 2163
Sfr274I	CTCGAG	1 cut(s)	1198
SfuI	TTCGAA	1 cut(s)	284
SinI	GGWCC	1 cut(s)	379
SlaI	CTCGAG	1 cut(s)	1198
SmaI	CCCGGG	1 cut(s)	2146
SmlI	CTYRAG	4 cut(s)	374, 541, 1198, 1854
SmoI	CTYRAG	4 cut(s)	374, 541, 1198, 1854
SpeI	ACTAGT	1 cut(s)	191
SphI	GCATGC	1 cut(s)	1130
SsiI	CCGC	9 cut(s)	20, 110, 165, 1089, 1487, 2111, 2124, 2154, 2180
SspI	AATATT	2 cut(s)	391, 508
SspMI	CTAG	4 cut(s)	56, 81, 192, 1577
SstI	GAGCTC	1 cut(s)	1205
StyD4I	CCNGG	7 cut(s)	151, 324, 490, 1099, 2020, 2143, 2144
StyI	CCWWGG	4 cut(s)	86, 1176, 1385, 1434
TaiI	ACGT	3 cut(s)	640, 1167, 1373
TaqI	TCGA	7 cut(s)	284, 418, 422, 948, 1073, 1199, 1957
TatI	WGTACW	4 cut(s)	882, 1106, 1150, 1374
TauI	GCSGC	3 cut(s)	1490, 2113, 2156
TfiI	GAWTC	3 cut(s)	733, 1381, 1588
TscAI	CASTG	5 cut(s)	106, 805, 970, 1294, 1777
TseFI	GTSAC	3 cut(s)	796, 1768, 1903
TseI	GCWGC	8 cut(s)	35, 167, 242, 268, 1007, 1952, 2191, 2204
Tsp45I	GTSAC	3 cut(s)	796, 1768, 1903
TspDTI	ATGAA	4 cut(s)	583, 696, 1631, 1887
TspGWI	ACGGA	1 cut(s)	1095
TspMI	CCCGGG	1 cut(s)	2144
TspRI	CASTG	5 cut(s)	106, 805, 970, 1294, 1777
Van91I	CCANNNNNTGG	1 cut(s)	2156
VpaK11BI	GGWCC	1 cut(s)	379
XapI	RAATTY	3 cut(s)	1424, 1444, 1763
XceI	RCATGY	2 cut(s)	1130, 2059
XcmI	CCANNNNNNNNNTGG	1 cut(s)	495
XhoI	CTCGAG	1 cut(s)	1198
XmaI	CCCGGG	1 cut(s)	2144
XmnI	GAANNNNTTC	1 cut(s)	1364
XspI	CTAG	4 cut(s)	56, 81, 192, 1577
Zsp2I	ATGCAT	1 cut(s)	1128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.