Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0002327

Physical Location & Seq

Genomic Coordinates Reverse (-)

26161183 .. 26167218

Gene Structure 6036 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1190400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGTGTAACTCACGCGCTCTGGTTGCACTTGCTCTGCTTCTTCACTCAGCAGTAGCTCTGGTCTCTGCGCAGGGATCTAGTAAATGGAAAACACTTAGCGGAGATCCGCCTAAGGTTATAGCACGCGGAGGATTTTCTGGGCTCTTTCCGGGTTATAGTTCTGCGGCCTTCAGTTTGGCGTTGATCACAAGTGTACAGGATGCAGTCTTATGGTGTGATGTTCAGTTGACGAAGGATGAAGCTGGAATTTGCTTTCCAGATCTCTTGCTGAATAATAATTCCAATATTGACATGGTCTTGCCAAAAAAGGATAAAAGTTACCTAGTTAATGGAGTTCCTACCAAAGGATGGTTTACTGTGGATTATACTTTGGACGACCTAGCATCTATCTATGTTACTCAGGGGATATATTCTCGAACTAATAGGTTTGATGGCAATCTGTACCCAATTCTCCTTATCGAAGATGTTGCTACGCAGATCAAACCTCCAAGCTTATGGTTGAATATTCAGCATGATATCTTCTTCTCACAACACAACTTGAGTATGAGAAACTATGTGCTTTCTGTATCTAAACAAGTGGTTATCAATTATATCTCATCACCGGAGGTGGCTTTCCTGAACAGTATCAAAGCACGGGTTAGTCCGAGTGCAACAAAGCTGGTCTTTCGGTTTTTGGGACAAGATGAGACAGAGCCTTCAACCAACCAAACTTATGGTTCTTTATTAAAGAATCTCACATTTATCAAGACATTTGCCTCAGGAATTCTAATTCCTAAAACTTACATATGGCCTGTCACCAAATATAATTATTTAGAGCCTCACACTTCAGTTGTAACAGATGCTCATAAAGAAGGGCTAACAGTATTTGCGTCAGATTTTGTTAATGATGTTCCATTAGCTTACAATTACAGTTATGATCCAGTGTCCGAGTACCTGCAATTTATTGACAATGGTGACTTCAGTGTTGATGGTGTGCTGTCTGACTTTCCAATAACACCATCCGAGGCCATAGATTGTTTTGCCCATCTTGGAAGTAATGCTTCAGGACAAGCCAAGCCCTTGGTTATCTCGAAACATGGAGCAAGTGGAGACTTACCAAGTTGTACTGACTTGGCATATGAAAAAGCAATTGCAAATGGGGTAGATGTACTAGATTGTCCTGTACAAATATCCAAGGATGGAATACCATTCTGCGCAAGTTCTATAAATCTTATAGATAGCACGACAGTTGCTCAATCACCTTTTAGCGACCTCACAGAGGTTGTTCCAGAAATTAAGGCTGGCAGTGGAATATATACCTTTAGCCTAACATGGAAAGACATTGAAGGCCTGACCCCAACAATATCAAATCCATGGTCAAAGTACACGTTGTTCCGGAATCCAATGTCCAAAACTGGTGGCAAGTACTTGACATTATCTGATTTCTTGGCCTTGGCAAAGAGGTCAAGTTCTCTTTCTGGTGTCTTGATCGGCATAGAGTATGCAGCGTATCTTGCAGAGAAGCAGAAATTAAGTATAACTGATGCAGTCATGAATACCTTGAGCAAAGCAGGTTTTGATAATCAGACAGCTTTAGATGTCAAGATTCAGTCCACTAATAGTTCTGTTCTGATGAAATTCAAGGAGAAAACCAGTTATGAACTTGTTTACAAAATTGAAGAGGAAATTGGTGATGCCCCTAGTTCAACTATTGAGGGCATCAAGAAGTTTGCCGACTCTGTGGTCATCAACAAGGCCTCTATCTTTCCCGAAGTCGAGGCATTTATCACTGGTGTAACAGATGTTGTATCAAAACTACAAGACGCTAAGCTTCCAGTTTATGTTGAACTCTTCAGCAACGAGTTTGTGAGTCAACCATGGGACTTCTTCTCGGATCCAACTGTGGAGATCAATTCATTTGTCTCGGGGGTCAATATTGATGGTGTTATCACAGACTTCCCCAAAACGGCGGCGAGATACAAAAAGAACCGGTGTTTAGGTAGAAAAGAAGTACCTAACTACATGAGTCCTATTCAGCCAGCCAGTCTGATACAAGTTGTTACCCCTTCATATTTGCCTCCTGCTGAGGCTCCAAATCCAACCCTGAGGGAGAGTGATGTGATTGAGCCACCTTTGCCTTCCGTTACGGCCCAGGCTCCTGCGCCAACTAGTGGATCTTCAGTGGGAGCTTCACCTCAACCTTCCGGGCAGCCTAAGATTGCCGCATGCTTCTTCCTCTCGTATCTGGCTATGGCGATTGCCGCTCTTTTCGTGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006968 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008889 GO:0009505 GO:0009506 GO:0009653 GO:0009664 GO:0009791 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010016 GO:0010026 GO:0010052 GO:0010053 GO:0010054 GO:0010103 GO:0010374 GO:0010383 GO:0010441 GO:0010442 GO:0016020 GO:0016043 GO:0016049 GO:0016787 GO:0016788 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030243 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0046872 GO:0048364 GO:0048367 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0052541 GO:0055044 GO:0060560 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

GDPD

Protein Analysis

753

Amino Acids

81.73

Weight (kDa)

5.06

Isoelectric Point (pI)

41.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDPD	PF03009	360 - 649	2e-21	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66970 AT1G66970 AT1G66970 AT4G26690
fragaria_vesca	FvH4_3g13670 FvH4_3g13670 FvH4_3g13670 FvH4_3g30290 FvH4_3g30290
malus_domestica	MD03G1190400.v1.1 MD11G1207100.v1.1
prunus_persica	Prupe.4G228400_v2.0.a1 Prupe.4G228400_v2.0.a1
pyrus_communis	pycom03g14330 pycom03g14370 pycom11g18010
rosa_chinensis	RchiOBHm_Chr5g0022921 RchiOBHm_Chr5g0056171
rosa_laevigata	RLG00000032682 RLG00000035057 RLG00000035060
rosa_multiflora	Rmu_sc0000680.1_g000027 Rmu_sc0001787.1_g000024 Rmu_sc0002675.1_g000001
rosa_roxburghii	Rroxscaffold_1G00024130 Rroxscaffold_1G00056420
rosa_rugosa	Rorug05G0075500 Rorug05G0297800 Rorug05G0297800
rosa_samantha	Rh5AG162000 Rh5AG368900 Rh5BG161200 Rh5BG379900 Rh5CG175800 Rh5CG402700 Rh5DG162500 Rh5DG392700 Rh5DG392900
rosa_wichuraiana	Rw0G004450 Rw0G012690 Rw5G014580 Rw5G034630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1721
Acc16I	TGCGCA	2 cut(s)	69, 1195
Acc36I	ACCTGC	2 cut(s)	942, 1541
AccB7I	CCANNNNNTGG	2 cut(s)	348, 2150
AccBSI	CCGCTC	1 cut(s)	2243
AccII	CGCG	2 cut(s)	15, 126
AccIII	TCCGGA	1 cut(s)	1374
AciI	CCGC	7 cut(s)	99, 107, 126, 164, 1949, 2202, 2241
AclWI	GGATC	6 cut(s)	82, 98, 911, 1868, 1881, 2161
AcsI	RAATTY	3 cut(s)	246, 762, 1616
AcuI	CTGAAG	6 cut(s)	154, 810, 943, 1026, 1816, 2142
AfaI	GTAC	9 cut(s)	195, 443, 932, 1105, 1149, 1164, 1364, 1406, 1992
AfiI	CCNNNNNNNGG	5 cut(s)	344, 348, 1258, 1945, 2150
AflIII	ACRYGT	1 cut(s)	1365
AgeI	ACCGGT	1 cut(s)	1968
AgsI	TTSAA	7 cut(s)	502, 699, 1325, 1621, 1658, 1686, 1826
AhlI	ACTAGT	1 cut(s)	2147
AjnI	CCWGG	1 cut(s)	2130
AjuI	GAANNNNNNNTTGG	2 cut(s)	1650, 1682
AluBI	AGCT	8 cut(s)	56, 242, 492, 658, 899, 1571, 1810, 2168
AluI	AGCT	8 cut(s)	56, 242, 492, 658, 899, 1571, 1810, 2168
Alw26I	GTCTC	4 cut(s)	67, 680, 1083, 1906
AlwI	GGATC	6 cut(s)	82, 98, 911, 1868, 1881, 2161
Ama87I	CYCGRG	1 cut(s)	1903
Aor13HI	TCCGGA	1 cut(s)	1374
AoxI	GGCC	7 cut(s)	165, 788, 1005, 1327, 1428, 1734, 2127
ApeKI	GCWGC	2 cut(s)	1484, 2188
ApoI	RAATTY	3 cut(s)	246, 762, 1616
ArsI	GACNNNNNNTTYG	2 cut(s)	1340, 1372
AsiGI	ACCGGT	1 cut(s)	1968
AspLEI	GCGC	4 cut(s)	17, 70, 1196, 2143
AspS9I	GGNCC	1 cut(s)	2128
AsuC2I	CCSGG	2 cut(s)	150, 2185
AsuHPI	GGTGA	6 cut(s)	591, 787, 965, 1230, 1682, 2163
AvaI	CYCGRG	1 cut(s)	1903
AxyI	CCTNAGG	3 cut(s)	111, 757, 2084
BamHI	GGATCC	1 cut(s)	1873
BanII	GRGCYC	1 cut(s)	144
BbvCI	CCTCAGC	1 cut(s)	2064
BbvI	GCAGC	2 cut(s)	1496, 2200
BccI	CCATC	7 cut(s)	342, 425, 962, 1006, 1032, 1172, 1913
BceAI	ACGGC	2 cut(s)	1962, 2142
BcgI	CGANNNNNNTGC	2 cut(s)	449, 483
BciT130I	CCWGG	1 cut(s)	2132
BclI	TGATCA	1 cut(s)	183
BcnI	CCSGG	2 cut(s)	150, 2185
BcoDI	GTCTC	4 cut(s)	67, 680, 1083, 1906
BcuI	ACTAGT	1 cut(s)	2147
BfaI	CTAG	6 cut(s)	78, 323, 380, 1151, 1680, 2148
BfuAI	ACCTGC	2 cut(s)	942, 1541
BglII	AGATCT	1 cut(s)	259
BisI	GCNGC	6 cut(s)	165, 1485, 1950, 2189, 2202, 2241
BlpI	GCTNAGC	1 cut(s)	1806
BlsI	GCNGC	6 cut(s)	166, 1486, 1951, 2190, 2203, 2242
BmcAI	AGTACT	1 cut(s)	1406
Bme1390I	CCNGG	3 cut(s)	150, 2132, 2185
BmeT110I	CYCGRG	1 cut(s)	1903
BmgT120I	GGNCC	1 cut(s)	2128
BmiI	GGNNCC	3 cut(s)	1875, 2070, 2136
BmrFI	CCNGG	3 cut(s)	150, 2132, 2185
BmsI	GCATC	6 cut(s)	190, 392, 829, 1513, 1663, 1707
Bpu10I	CCTNAGC	1 cut(s)	2064
Bpu1102I	GCTNAGC	1 cut(s)	1806
BpuEI	CTTGAG	2 cut(s)	559, 1561
BpuMI	CCSGG	2 cut(s)	150, 2185
BsaBI	GATNNNNATC	1 cut(s)	435
BsaI	GGTCTC	1 cut(s)	67
BsaJI	CCNNGG	7 cut(s)	1002, 1059, 1173, 1352, 1431, 1856, 2130
BsaWI	WCCGGW	3 cut(s)	601, 1374, 1968
Bsc4I	CCNNNNNNNGG	5 cut(s)	344, 348, 1258, 1945, 2150
Bse118I	RCCGGY	1 cut(s)	1968
Bse1I	ACTGG	6 cut(s)	920, 1399, 1632, 1774, 1814, 2022
Bse21I	CCTNAGG	3 cut(s)	111, 757, 2084
Bse8I	GATNNNNATC	1 cut(s)	435
BseAI	TCCGGA	1 cut(s)	1374
BseBI	CCWGG	1 cut(s)	2132
BseDI	CCNNGG	7 cut(s)	1002, 1059, 1173, 1352, 1431, 1856, 2130
BseGI	GGATG	5 cut(s)	205, 241, 353, 998, 1183
BseJI	GATNNNNATC	1 cut(s)	435
BseLI	CCNNNNNNNGG	5 cut(s)	344, 348, 1258, 1945, 2150
BseMII	CTCAG	5 cut(s)	60, 413, 771, 2055, 2075
BseNI	ACTGG	6 cut(s)	920, 1399, 1632, 1774, 1814, 2022
BseXI	GCAGC	2 cut(s)	1496, 2200
Bsh1236I	CGCG	2 cut(s)	15, 126
BshFI	GGCC	7 cut(s)	167, 790, 1007, 1329, 1430, 1736, 2129
BshTI	ACCGGT	1 cut(s)	1968
BsiHKCI	CYCGRG	1 cut(s)	1903
BsiSI	CCGG	5 cut(s)	149, 602, 1375, 1969, 2184
BslFI	GGGAC	2 cut(s)	690, 1874
BslI	CCNNNNNNNGG	5 cut(s)	344, 348, 1258, 1945, 2150
BsmAI	GTCTC	4 cut(s)	67, 680, 1083, 1906
BsmFI	GGGAC	2 cut(s)	690, 1874
BsnI	GGCC	7 cut(s)	167, 790, 1007, 1329, 1430, 1736, 2129
Bso31I	GGTCTC	1 cut(s)	67
BsoBI	CYCGRG	1 cut(s)	1903
Bsp1286I	GDGCHC	1 cut(s)	144
Bsp13I	TCCGGA	1 cut(s)	1374
Bsp1407I	TGTACA	2 cut(s)	193, 1162
Bsp1720I	GCTNAGC	1 cut(s)	1806
Bsp19I	CCATGG	2 cut(s)	1352, 1856
BspACI	CCGC	7 cut(s)	99, 107, 126, 164, 1949, 2202, 2241
BspANI	GGCC	7 cut(s)	167, 790, 1007, 1329, 1430, 1736, 2129
BspCNI	CTCAG	5 cut(s)	59, 412, 770, 2056, 2076
BspEI	TCCGGA	1 cut(s)	1374
BspFNI	CGCG	2 cut(s)	15, 126
BspHI	TCATGA	1 cut(s)	1530
BspLI	GGNNCC	3 cut(s)	1875, 2070, 2136
BspMI	ACCTGC	2 cut(s)	942, 1541
BspPI	GGATC	6 cut(s)	82, 98, 911, 1868, 1881, 2161
BspTNI	GGTCTC	1 cut(s)	67
BsrBI	CCGCTC	1 cut(s)	2243
BsrFI	RCCGGY	1 cut(s)	1968
BsrGI	TGTACA	2 cut(s)	193, 1162
BsrI	ACTGG	6 cut(s)	920, 1399, 1632, 1774, 1814, 2022
BssAI	RCCGGY	1 cut(s)	1968
BssECI	CCNNGG	7 cut(s)	1002, 1059, 1173, 1352, 1431, 1856, 2130
BssT1I	CCWWGG	5 cut(s)	1059, 1173, 1352, 1431, 1856
Bst2UI	CCWGG	1 cut(s)	2132
Bst4CI	ACNGT	6 cut(s)	358, 623, 862, 911, 1228, 1882
Bst6I	CTCTTC	2 cut(s)	1653, 1835
BstAUI	TGTACA	2 cut(s)	193, 1162
BstC8I	GCNNGC	4 cut(s)	124, 1282, 2019, 2206
BstDEI	CTNAG	9 cut(s)	46, 95, 111, 399, 757, 1806, 2064, 2084, 2193
BstDSI	CCRYGG	2 cut(s)	1352, 1856
BstENI	CCTNNNNNAGG	2 cut(s)	342, 1256
BstF5I	GGATG	5 cut(s)	205, 241, 353, 998, 1183
BstFNI	CGCG	2 cut(s)	15, 126
BstHHI	GCGC	4 cut(s)	17, 70, 1196, 2143
BstMAI	GTCTC	4 cut(s)	67, 680, 1083, 1906
BstMWI	GCNNNNNNNGC	4 cut(s)	23, 1493, 2113, 2240
BstNI	CCWGG	1 cut(s)	2132
BstNSI	RCATGY	1 cut(s)	2208
BstSCI	CCNGG	3 cut(s)	148, 2130, 2183
BstUI	CGCG	2 cut(s)	15, 126
BstV1I	GCAGC	2 cut(s)	1496, 2200
BstX2I	RGATCY	5 cut(s)	74, 103, 259, 1873, 2153
BstXI	CCANNNNNNTGG	3 cut(s)	495, 713, 1060
BstYI	RGATCY	5 cut(s)	74, 103, 259, 1873, 2153
Bsu36I	CCTNAGG	3 cut(s)	111, 757, 2084
BsuRI	GGCC	7 cut(s)	167, 790, 1007, 1329, 1430, 1736, 2129
BtgI	CCRYGG	2 cut(s)	1352, 1856
BtsCI	GGATG	5 cut(s)	205, 241, 353, 998, 1183
BtsI	GCAGTG	1 cut(s)	1291
BtsIMutI	CAGTG	5 cut(s)	927, 967, 1291, 1767, 2166
BveI	ACCTGC	2 cut(s)	942, 1541
Cac8I	GCNNGC	4 cut(s)	124, 1282, 2019, 2206
CciI	TCATGA	1 cut(s)	1530
CfoI	GCGC	4 cut(s)	17, 70, 1196, 2143
Cfr10I	RCCGGY	1 cut(s)	1968
Cfr13I	GGNCC	1 cut(s)	2128
CseI	GACGC	2 cut(s)	858, 1811
Csp6I	GTAC	9 cut(s)	194, 442, 931, 1104, 1148, 1163, 1363, 1405, 1991
CspAI	ACCGGT	1 cut(s)	1968
CspCI	CAANNNNNGTGG	2 cut(s)	1378, 1413
CviAII	CATG	9 cut(s)	292, 512, 1076, 1311, 1353, 1531, 1857, 2002, 2205
CviQI	GTAC	9 cut(s)	194, 442, 931, 1104, 1148, 1163, 1363, 1405, 1991
DdeI	CTNAG	9 cut(s)	46, 95, 111, 399, 757, 1806, 2064, 2084, 2193
DrdI	GACNNNNNNGTC	1 cut(s)	1721
DseDI	GACNNNNNNGTC	1 cut(s)	1721
Eam1104I	CTCTTC	2 cut(s)	1653, 1835
EarI	CTCTTC	2 cut(s)	1653, 1835
EciI	GGCGGA	1 cut(s)	96
Eco130I	CCWWGG	5 cut(s)	1059, 1173, 1352, 1431, 1856
Eco147I	AGGCCT	2 cut(s)	1329, 1736
Eco24I	GRGCYC	1 cut(s)	144
Eco31I	GGTCTC	1 cut(s)	67
Eco32I	GATATC	1 cut(s)	517
Eco57I	CTGAAG	6 cut(s)	154, 810, 943, 1026, 1816, 2142
Eco81I	CCTNAGG	3 cut(s)	111, 757, 2084
Eco88I	CYCGRG	1 cut(s)	1903
EcoNI	CCTNNNNNAGG	2 cut(s)	342, 1256
EcoRI	GAATTC	1 cut(s)	762
EcoRII	CCWGG	1 cut(s)	2130
EcoRV	GATATC	1 cut(s)	517
EcoT14I	CCWWGG	5 cut(s)	1059, 1173, 1352, 1431, 1856
EcoT38I	GRGCYC	1 cut(s)	144
ErhI	CCWWGG	5 cut(s)	1059, 1173, 1352, 1431, 1856
FaeI	CATG	9 cut(s)	295, 515, 1079, 1314, 1356, 1534, 1860, 2005, 2208
FalI	AAGNNNNNCTT	4 cut(s)	647, 679, 1024, 1056
FaqI	GGGAC	2 cut(s)	690, 1874
FatI	CATG	9 cut(s)	291, 511, 1075, 1310, 1352, 1530, 1856, 2001, 2204
FauNDI	CATATG	2 cut(s)	785, 1117
FbaI	TGATCA	1 cut(s)	183
Fnu4HI	GCNGC	6 cut(s)	165, 1485, 1950, 2189, 2202, 2241
FokI	GGATG	5 cut(s)	212, 248, 360, 985, 1190
FriOI	GRGCYC	1 cut(s)	144
Fsp4HI	GCNGC	6 cut(s)	165, 1485, 1950, 2189, 2202, 2241
FspBI	CTAG	6 cut(s)	78, 323, 380, 1151, 1680, 2148
FspI	TGCGCA	2 cut(s)	69, 1195
GlaI	GCGC	4 cut(s)	16, 69, 1195, 2142
GluI	GCNGC	6 cut(s)	165, 1485, 1950, 2189, 2202, 2241
HaeIII	GGCC	7 cut(s)	167, 790, 1007, 1329, 1430, 1736, 2129
HapII	CCGG	5 cut(s)	149, 602, 1375, 1969, 2184
HgaI	GACGC	2 cut(s)	858, 1811
HhaI	GCGC	4 cut(s)	17, 70, 1196, 2143
Hin1II	CATG	9 cut(s)	295, 515, 1079, 1314, 1356, 1534, 1860, 2005, 2208
Hin6I	GCGC	4 cut(s)	15, 68, 1194, 2141
HinP1I	GCGC	4 cut(s)	15, 68, 1194, 2141
HincII	GTYRAC	2 cut(s)	228, 1853
HindII	GTYRAC	2 cut(s)	228, 1853
HindIII	AAGCTT	2 cut(s)	490, 1808
HinfI	GANTC	6 cut(s)	730, 1378, 1585, 1715, 1849, 2005
HpaII	CCGG	5 cut(s)	149, 602, 1375, 1969, 2184
HphI	GGTGA	6 cut(s)	591, 787, 965, 1230, 1682, 2163
Hpy166II	GTNNAC	7 cut(s)	194, 228, 354, 1365, 1593, 1648, 1853
Hpy8I	GTNNAC	7 cut(s)	194, 228, 354, 1365, 1593, 1648, 1853
HpyAV	CCTTC	8 cut(s)	178, 226, 705, 845, 1319, 2055, 2127, 2190
HpyCH4III	ACNGT	6 cut(s)	358, 623, 862, 911, 1228, 1882
HpyCH4IV	ACGT	1 cut(s)	1367
HpyCH4V	TGCA	8 cut(s)	26, 203, 650, 937, 1133, 1484, 1496, 1526
HpyF10VI	GCNNNNNNNGC	4 cut(s)	23, 1493, 2113, 2240
HpyF3I	CTNAG	9 cut(s)	46, 95, 111, 399, 757, 1806, 2064, 2084, 2193
HpySE526I	ACGT	1 cut(s)	1367
Hsp92II	CATG	9 cut(s)	295, 515, 1079, 1314, 1356, 1534, 1860, 2005, 2208
HspAI	GCGC	4 cut(s)	15, 68, 1194, 2141
Kpn2I	TCCGGA	1 cut(s)	1374
Ksp22I	TGATCA	1 cut(s)	183
LmnI	GCTCC	4 cut(s)	1079, 2074, 2140, 2165
Lsp1109I	GCAGC	2 cut(s)	1496, 2200
LweI	GCATC	6 cut(s)	190, 392, 829, 1513, 1663, 1707
MaeI	CTAG	6 cut(s)	78, 323, 380, 1151, 1680, 2148
MaeII	ACGT	1 cut(s)	1367
MaeIII	GTNAC	9 cut(s)	5, 317, 394, 793, 832, 953, 1774, 2038, 2122
MbiI	CCGCTC	1 cut(s)	2243
MboII	GAAGA	9 cut(s)	32, 473, 511, 514, 1670, 1822, 1858, 2148, 2203
MfeI	CAATTG	1 cut(s)	1128
MflI	RGATCY	5 cut(s)	74, 103, 259, 1873, 2153
MhlI	GDGCHC	1 cut(s)	144
MlyI	GAGTC	3 cut(s)	1709, 1858, 2014
MmeI	TCCRAC	2 cut(s)	1901, 2102
MroI	TCCGGA	1 cut(s)	1374
MseI	TTAA	5 cut(s)	327, 725, 882, 1275, 1511
MspI	CCGG	5 cut(s)	149, 602, 1375, 1969, 2184
MspR9I	CCNGG	3 cut(s)	150, 2132, 2185
MunI	CAATTG	1 cut(s)	1128
MvaI	CCWGG	1 cut(s)	2132
MvnI	CGCG	2 cut(s)	15, 126
MwoI	GCNNNNNNNGC	4 cut(s)	23, 1493, 2113, 2240
NciI	CCSGG	2 cut(s)	150, 2185
NcoI	CCATGG	2 cut(s)	1352, 1856
NdeI	CATATG	2 cut(s)	785, 1117
NlaIII	CATG	9 cut(s)	295, 515, 1079, 1314, 1356, 1534, 1860, 2005, 2208
NlaIV	GGNNCC	3 cut(s)	1875, 2070, 2136
NmuCI	GTSAC	2 cut(s)	793, 953
NsbI	TGCGCA	2 cut(s)	69, 1195
NspI	RCATGY	1 cut(s)	2208
PaeI	GCATGC	1 cut(s)	2208
PagI	TCATGA	1 cut(s)	1530
PceI	AGGCCT	2 cut(s)	1329, 1736
PfeI	GAWTC	3 cut(s)	730, 1378, 1585
PflFI	GACNNNGTC	1 cut(s)	293
PflMI	CCANNNNNTGG	2 cut(s)	348, 2150
PinAI	ACCGGT	1 cut(s)	1968
PkrI	GCNGC	6 cut(s)	166, 1486, 1951, 2190, 2203, 2242
PleI	GAGTC	3 cut(s)	1709, 1857, 2013
PpsI	GAGTC	3 cut(s)	1709, 1857, 2013
Psp6I	CCWGG	1 cut(s)	2130
PspGI	CCWGG	1 cut(s)	2130
PspN4I	GGNNCC	3 cut(s)	1875, 2070, 2136
PspPI	GGNCC	1 cut(s)	2128
PsrI	GAACNNNNNNTAC	2 cut(s)	1355, 1387
PsuI	RGATCY	5 cut(s)	74, 103, 259, 1873, 2153
PsyI	GACNNNGTC	1 cut(s)	293
RsaI	GTAC	9 cut(s)	195, 443, 932, 1105, 1149, 1164, 1364, 1406, 1992
RsaNI	GTAC	9 cut(s)	194, 442, 931, 1104, 1148, 1163, 1363, 1405, 1991
SaqAI	TTAA	5 cut(s)	327, 725, 882, 1275, 1511
SatI	GCNGC	6 cut(s)	165, 1485, 1950, 2189, 2202, 2241
Sau96I	GGNCC	1 cut(s)	2128
ScaI	AGTACT	1 cut(s)	1406
SchI	GAGTC	3 cut(s)	1709, 1858, 2014
ScrFI	CCNGG	3 cut(s)	150, 2132, 2185
SduI	GDGCHC	1 cut(s)	144
SfaNI	GCATC	6 cut(s)	190, 392, 829, 1513, 1663, 1707
SmlI	CTYRAG	2 cut(s)	538, 1540
SmoI	CTYRAG	2 cut(s)	538, 1540
SpeI	ACTAGT	1 cut(s)	2147
SphI	GCATGC	1 cut(s)	2208
SseBI	AGGCCT	2 cut(s)	1329, 1736
SsiI	CCGC	7 cut(s)	99, 107, 126, 164, 1949, 2202, 2241
SspI	AATATT	3 cut(s)	286, 505, 1915
SspMI	CTAG	6 cut(s)	78, 323, 380, 1151, 1680, 2148
StuI	AGGCCT	2 cut(s)	1329, 1736
StyD4I	CCNGG	3 cut(s)	148, 2130, 2183
StyI	CCWWGG	5 cut(s)	1059, 1173, 1352, 1431, 1856
TaaI	ACNGT	6 cut(s)	358, 623, 862, 911, 1228, 1882
TaiI	ACGT	1 cut(s)	1370
TaqI	TCGA	4 cut(s)	415, 459, 1070, 1755
TatI	WGTACW	6 cut(s)	193, 1103, 1147, 1162, 1362, 1404
TauI	GCSGC	4 cut(s)	167, 1952, 2204, 2243
TfiI	GAWTC	3 cut(s)	730, 1378, 1585
Tru1I	TTAA	5 cut(s)	327, 725, 882, 1275, 1511
Tru9I	TTAA	5 cut(s)	327, 725, 882, 1275, 1511
TscAI	CASTG	5 cut(s)	927, 967, 1291, 1774, 2166
TseFI	GTSAC	2 cut(s)	793, 953
TseI	GCWGC	2 cut(s)	1484, 2188
Tsp45I	GTSAC	2 cut(s)	793, 953
TspDTI	ATGAA	7 cut(s)	252, 1134, 1547, 1628, 1653, 1884, 2037
TspGWI	ACGGA	1 cut(s)	2110
TspRI	CASTG	5 cut(s)	927, 967, 1291, 1774, 2166
Tth111I	GACNNNGTC	1 cut(s)	293
Van91I	CCANNNNNTGG	2 cut(s)	348, 2150
XagI	CCTNNNNNAGG	2 cut(s)	342, 1256
XapI	RAATTY	3 cut(s)	246, 762, 1616
XceI	RCATGY	1 cut(s)	2208
XcmI	CCANNNNNNNNNTGG	1 cut(s)	289
XspI	CTAG	6 cut(s)	78, 323, 380, 1151, 1680, 2148
ZrmI	AGTACT	1 cut(s)	1406

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.