Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0002327

Physical Location & Seq

Genomic Coordinates Forward (+)

16806303 .. 16811059

Gene Structure 4757 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG161200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGTGGAGCTTTTGTGCTCTGGTTGTTATTCTACTTGCTTCTCTTCTTCTTCTTCTTCACTTGGCAGCTCTGGTCTCTGCTGATCAGGGCTCCACCACTAGTCAGTGGCAAACACTCAAAGGCAAGCCGCCTTTGGTCATAGCACGTGGGGGTTTTTCAGGACTATTACCTGGTTCTAGTTCTGACGCATACAAGTTCACATTGTCCACTAGTGTACCAGATGTGTTATTTTGGTGCGATGTCCAACTAACAAAGGAAGGAGCTGGAATTTGCTTTCCAGATCTGCTACTGAATAACAATTCTAATGTTGATATCATCTATCCAAAGAAGGACAAGACTTACATAGTTAACGGAGTTCCTACTGGCGGATGGTTCACCATCGATTATACTCTCAAGGACCTTGCAAATGTTTCTATTACTCAGGGAGTATTTAGTCGAGCTAATAGGTTTGATGACAATATGTACCCAATTCTCACCGTTGAAGATGTGGCTATCAATTTGACAGCACCAGGCTTATGGTTGAATATTGAGAACAATATCTTCTTCTCACAACACAACTTGAGCGTGAGAAACTTTGTGCTTTCTGTAATGAGAAAAGTGGTTGTGAATTATATCTCATCACCGGAGGTGGCTTTCCTGAACAGCATTAAAGGAGTTGTTAATCCAAGAACTACCAAGTTGGTCTTTCGGTTTCTGGAACAAACTGAGATTGAGCCTTCAATCAATCAAACTTATGGATCTCTGTTAAAGAATCTCACATTCATCAAGACATTTGCCTCAGGAATTCTGGTTCCTAAAACTTACATATGGCCCGTCACTAATGACAATTATTTAGAACCACACACTTCACTTGTTTTGGATGCTCATACAGCAGAACTAACGGTATTTGTGTCTGATTTGGTGAATGATGCACCATTACCCTACAATTACAGTTATGATCCATTAGCTGAGTACCTGTCATTCATAGACAATGGAAACTTCACTGTTGATGGTGTGCTGTCTGATTTTCCGATAACTCCATCAGCAGCCATAGATTGCTTTGCTCACCTAAGACAAAATGCTTCAGTGCAAGACAAGCCTTTGGTTATTTCGAAAAATGGAGCAAGCGGAGACTACCCTGATTGTACTGATTTGGCATATATGAAAGCGCTTGAAGATGGTGTGGATGTACTCGATTGTCCTGTCCAAATGTCCAAGGATGGGATACCATTTTGCTCCAGTTCTATAAATCTCATTCATACCACAACAGTTGCTCAATCAAGTTTTCAGAACATCACAATGGTTGTTCCGGAGATTCAGGCTGACAATGGAATATATACCTTTAGGCTGACATGGGATCAGATCAAAACATTACAGCCAAGTATATCAAACCCCCAGCAGAGGTACAAGTTGTACAGGAATCCAAGGTTCAAAAGTGCTGGGACTTACTTGAGACTATCTGATTTTTTTACCTTGGCAAAGAACAGGAGCTCTGTTTCAGGTGTCTTAATCAGCGTAGAGTATGCAGCATATCTTGCAGAGAAGGAGGGATTAAGTGTAACAGATGCAGTCATTAATGAGTTGAACAAAGCTGGTTTGGACAATCAGACAGCCCTAGATGTCATGATTCAGTCCACTAATAGTTCTGTTCTAATGAAATTTAAGAAGGAAAGCAAGTGTAAACTTGTTTACAAGATCGAAGAAGTTATTGGTGATGCCCTTAATAGAACTCTTCAGGACATCAAGAAGTTTGCCAATTCTGTGGTCATCAACAAGGCCTCTGTCCTTCCTGAAAATAGTGAATACATCACTGGAGCAACCAATGTTGTAACAAAGCTGCATGCATTTGATCTTCCTGTTTATGTCGAACTGTTCAGCAATGAGTATGTATCTCAAGCATGGGACTTCTTCTCTGATCCGACTGTTGAGATCAATTCATTTGTCTCCGGGGCCAATACTGATGGTGTTATCACAGACTTCCCCAAAACAGCTGCTAGATACAAAAGAAACAAGTGTTTATTTTATAAAGAGAGACCTAGCTACATGAACCCTGTTCCACCAGGCGCACTGTTAACAGTTGTTTCTCCTCGTCAATTGCCACCGGCTGAGGCTCCGAATCCAGTGCTGATAGAGAGTGATGTGATTGAGCCACCTTTGCCTTCCGCCTTAGCTCCAGGGATCACCAATGGATCTACAGTAGCACCACCACCACCACCACCTCCAAACGGGCAGCCTAAGATTGCTGCATGCTTCTTTCTCTCAAATCTGGCTTTGCTTGTTGCCATCCTTTTACTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006968 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008889 GO:0009505 GO:0009506 GO:0009653 GO:0009664 GO:0009791 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010016 GO:0010026 GO:0010052 GO:0010053 GO:0010054 GO:0010103 GO:0010374 GO:0010383 GO:0010441 GO:0010442 GO:0016020 GO:0016043 GO:0016049 GO:0016787 GO:0016788 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030243 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0046872 GO:0048364 GO:0048367 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0052541 GO:0055044 GO:0060560 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

GDPD

Protein Analysis

759

Amino Acids

83.43

Weight (kDa)

5.2

Isoelectric Point (pI)

38.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDPD	PF03009	367 - 656	1.3e-25	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0002327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66970 AT1G66970 AT1G66970 AT4G26690
fragaria_vesca	FvH4_3g13670 FvH4_3g13670 FvH4_3g13670 FvH4_3g30290 FvH4_3g30290
malus_domestica	MD03G1190400.v1.1 MD11G1207100.v1.1
prunus_persica	Prupe.4G228400_v2.0.a1 Prupe.4G228400_v2.0.a1
pyrus_communis	pycom03g14330 pycom03g14370 pycom11g18010
rosa_chinensis	RchiOBHm_Chr5g0022921 RchiOBHm_Chr5g0056171
rosa_laevigata	RLG00000032682 RLG00000035057 RLG00000035060
rosa_multiflora	Rmu_sc0000680.1_g000027 Rmu_sc0001787.1_g000024 Rmu_sc0002675.1_g000001
rosa_roxburghii	Rroxscaffold_1G00024130 Rroxscaffold_1G00056420
rosa_rugosa	Rorug05G0075500 Rorug05G0297800 Rorug05G0297800
rosa_samantha	Rh5AG162000 Rh5AG368900 Rh5BG161200 Rh5BG379900 Rh5CG175800 Rh5CG402700 Rh5DG162500 Rh5DG392700 Rh5DG392900
rosa_wichuraiana	Rw0G004450 Rw0G012690 Rw5G014580 Rw5G034630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2004
AccIII	TCCGGA	1 cut(s)	1288
AciI	CCGC	4 cut(s)	128, 366, 1107, 2142
AclWI	GGATC	6 cut(s)	745, 932, 1344, 1889, 2165, 2176
AcsI	RAATTY	3 cut(s)	267, 783, 1637
AcuI	CTGAAG	2 cut(s)	1047, 1697
AcvI	CACGTG	1 cut(s)	146
AfaI	GTAC	7 cut(s)	216, 464, 953, 1126, 1170, 1385, 1394
AfeI	AGCGCT	1 cut(s)	1149
AfiI	CCNNNNNNNGG	4 cut(s)	365, 1200, 1380, 2204
AgsI	TTSAA	6 cut(s)	482, 523, 720, 1154, 1411, 1564
AhlI	ACTAGT	2 cut(s)	98, 209
AjnI	CCWGG	4 cut(s)	169, 508, 2038, 2152
AjuI	GAANNNNNNNTTGG	2 cut(s)	1671, 1703
AloI	GAACNNNNNNTCC	2 cut(s)	774, 806
Alw21I	GWGCWC	2 cut(s)	19, 1472
Alw26I	GTCTC	5 cut(s)	79, 1104, 1426, 1927, 2005
AlwI	GGATC	6 cut(s)	745, 932, 1344, 1889, 2165, 2176
Aor13HI	TCCGGA	1 cut(s)	1288
Aor51HI	AGCGCT	1 cut(s)	1149
AoxI	GGCC	3 cut(s)	809, 1755, 1929
ApeKI	GCWGC	7 cut(s)	65, 1025, 1505, 1816, 1970, 2209, 2222
ApoI	RAATTY	3 cut(s)	267, 783, 1637
AseI	ATTAAT	1 cut(s)	1554
AspLEI	GCGC	2 cut(s)	1150, 2045
AspS9I	GGNCC	3 cut(s)	397, 810, 1929
AsuC2I	CCSGG	1 cut(s)	1927
AsuHPI	GGTGA	7 cut(s)	367, 466, 612, 913, 1037, 1703, 2152
AsuII	TTCGAA	1 cut(s)	1091
AvaII	GGWCC	1 cut(s)	397
AxyI	CCTNAGG	1 cut(s)	778
BaeI	ACNNNNGTAYC	2 cut(s)	198, 231
BanII	GRGCYC	2 cut(s)	92, 1472
BbrPI	CACGTG	1 cut(s)	146
Bbv12I	GWGCWC	2 cut(s)	19, 1472
BbvCI	CCTCAGC	1 cut(s)	2085
BbvI	GCAGC	7 cut(s)	77, 1037, 1517, 1803, 1957, 2209, 2221
BccI	CCATC	8 cut(s)	363, 386, 983, 1027, 1151, 1193, 1934, 2270
BcgI	CGANNNNNNTGC	2 cut(s)	2083, 2117
BciT130I	CCWGG	4 cut(s)	171, 510, 2040, 2154
BciVI	GTATCC	1 cut(s)	1197
BclI	TGATCA	1 cut(s)	82
BcnI	CCSGG	1 cut(s)	1927
BcoDI	GTCTC	5 cut(s)	79, 1104, 1426, 1927, 2005
BcuI	ACTAGT	2 cut(s)	98, 209
BfaI	CTAG	6 cut(s)	99, 177, 210, 1595, 1974, 2016
BfmI	CTRYAG	1 cut(s)	2172
BfoI	RGCGCY	1 cut(s)	1151
BfuI	GTATCC	1 cut(s)	1197
BglII	AGATCT	1 cut(s)	280
BisI	GCNGC	8 cut(s)	66, 128, 1026, 1506, 1817, 1971, 2210, 2223
BlsI	GCNGC	8 cut(s)	67, 129, 1027, 1507, 1818, 1972, 2211, 2224
Bme1390I	CCNGG	5 cut(s)	171, 510, 1927, 2040, 2154
Bme18I	GGWCC	1 cut(s)	397
BmgT120I	GGNCC	3 cut(s)	397, 810, 1929
BmiI	GGNNCC	4 cut(s)	91, 792, 1930, 2091
BmrFI	CCNGG	5 cut(s)	171, 510, 1927, 2040, 2154
BmsI	GCATC	4 cut(s)	850, 898, 1534, 1684
BpmI	CTGGAG	3 cut(s)	1201, 1812, 2136
Bpu10I	CCTNAGC	2 cut(s)	2085, 2146
Bpu14I	TTCGAA	1 cut(s)	1091
BpuEI	CTTGAG	4 cut(s)	377, 580, 1450, 1857
BpuMI	CCSGG	1 cut(s)	1927
Bsa29I	ATCGAT	1 cut(s)	381
BsaAI	YACGTR	1 cut(s)	146
BsaI	GGTCTC	2 cut(s)	79, 2005
BsaJI	CCNNGG	5 cut(s)	1194, 1403, 1452, 1926, 2153
BsaWI	WCCGGW	2 cut(s)	622, 1288
BsaXI	ACNNNNNCTCC	1 cut(s)	28
Bsc4I	CCNNNNNNNGG	4 cut(s)	365, 1200, 1380, 2204
Bse118I	RCCGGY	1 cut(s)	2080
Bse1I	ACTGG	4 cut(s)	367, 1218, 1795, 2099
Bse21I	CCTNAGG	1 cut(s)	778
Bse3DI	GCAATG	1 cut(s)	1864
BseAI	TCCGGA	1 cut(s)	1288
BseBI	CCWGG	4 cut(s)	171, 510, 2040, 2154
BseCI	ATCGAT	1 cut(s)	381
BseDI	CCNNGG	5 cut(s)	1194, 1403, 1452, 1926, 2153
BseGI	GGATG	5 cut(s)	374, 865, 1171, 1204, 2262
BseLI	CCNNNNNNNGG	4 cut(s)	365, 1200, 1380, 2204
BseMI	GCAATG	1 cut(s)	1864
BseMII	CTCAG	5 cut(s)	434, 696, 792, 939, 2076
BseNI	ACTGG	4 cut(s)	367, 1218, 1795, 2099
BseRI	GAGGAG	1 cut(s)	2055
BseXI	GCAGC	7 cut(s)	77, 1037, 1517, 1803, 1957, 2209, 2221
BseYI	CCCAGC	2 cut(s)	1374, 1418
BshFI	GGCC	3 cut(s)	811, 1757, 1931
BshVI	ATCGAT	1 cut(s)	381
BsiHKAI	GWGCWC	2 cut(s)	19, 1472
BsiSI	CCGG	4 cut(s)	623, 1289, 1926, 2081
BslFI	GGGAC	2 cut(s)	1435, 1895
BslI	CCNNNNNNNGG	4 cut(s)	365, 1200, 1380, 2204
BsmAI	GTCTC	5 cut(s)	79, 1104, 1426, 1927, 2005
BsmFI	GGGAC	2 cut(s)	1435, 1895
BsnI	GGCC	3 cut(s)	811, 1757, 1931
Bso31I	GGTCTC	2 cut(s)	79, 2005
Bsp119I	TTCGAA	1 cut(s)	1091
Bsp1286I	GDGCHC	3 cut(s)	19, 92, 1472
Bsp13I	TCCGGA	1 cut(s)	1288
Bsp1407I	TGTACA	1 cut(s)	1392
BspACI	CCGC	4 cut(s)	128, 366, 1107, 2142
BspANI	GGCC	3 cut(s)	811, 1757, 1931
BspCNI	CTCAG	5 cut(s)	433, 697, 791, 940, 2077
BspDI	ATCGAT	1 cut(s)	381
BspEI	TCCGGA	1 cut(s)	1288
BspHI	TCATGA	1 cut(s)	1602
BspLI	GGNNCC	4 cut(s)	91, 792, 1930, 2091
BspPI	GGATC	6 cut(s)	745, 932, 1344, 1889, 2165, 2176
BspT104I	TTCGAA	1 cut(s)	1091
BspTNI	GGTCTC	2 cut(s)	79, 2005
BsrDI	GCAATG	1 cut(s)	1864
BsrFI	RCCGGY	1 cut(s)	2080
BsrGI	TGTACA	1 cut(s)	1392
BsrI	ACTGG	4 cut(s)	367, 1218, 1795, 2099
BssAI	RCCGGY	1 cut(s)	2080
BssECI	CCNNGG	5 cut(s)	1194, 1403, 1452, 1926, 2153
BssT1I	CCWWGG	3 cut(s)	1194, 1403, 1452
Bst2UI	CCWGG	4 cut(s)	171, 510, 2040, 2154
Bst6I	CTCTTC	2 cut(s)	48, 1716
BstAPI	GCANNNNNTGC	1 cut(s)	1514
BstAUI	TGTACA	1 cut(s)	1392
BstBAI	YACGTR	1 cut(s)	146
BstBI	TTCGAA	1 cut(s)	1091
BstC8I	GCNNGC	4 cut(s)	125, 1105, 1821, 2227
BstDEI	CTNAG	8 cut(s)	420, 705, 778, 948, 1049, 2085, 2146, 2214
BstF5I	GGATG	5 cut(s)	374, 865, 1171, 1204, 2262
BstH2I	RGCGCY	1 cut(s)	1151
BstHHI	GCGC	2 cut(s)	1150, 2045
BstMAI	GTCTC	5 cut(s)	79, 1104, 1426, 1927, 2005
BstMWI	GCNNNNNNNGC	4 cut(s)	869, 1075, 1514, 2134
BstNI	CCWGG	4 cut(s)	171, 510, 2040, 2154
BstNSI	RCATGY	2 cut(s)	1823, 2229
BstSCI	CCNGG	5 cut(s)	169, 508, 1925, 2038, 2152
BstSFI	CTRYAG	1 cut(s)	2172
BstV1I	GCAGC	7 cut(s)	77, 1037, 1517, 1803, 1957, 2209, 2221
BstX2I	RGATCY	3 cut(s)	280, 737, 2168
BstXI	CCANNNNNNTGG	2 cut(s)	516, 1741
BstYI	RGATCY	3 cut(s)	280, 737, 2168
Bsu15I	ATCGAT	1 cut(s)	381
Bsu36I	CCTNAGG	1 cut(s)	778
BsuI	GTATCC	1 cut(s)	1197
BsuRI	GGCC	3 cut(s)	811, 1757, 1931
BsuTUI	ATCGAT	1 cut(s)	381
BtgZI	GCGATG	1 cut(s)	252
BtsCI	GGATG	5 cut(s)	374, 865, 1171, 1204, 2262
BtsIMutI	CAGTG	6 cut(s)	110, 981, 1071, 1788, 2045, 2106
Cac8I	GCNNGC	4 cut(s)	125, 1105, 1821, 2227
CciI	TCATGA	1 cut(s)	1602
CfoI	GCGC	2 cut(s)	1150, 2045
Cfr10I	RCCGGY	1 cut(s)	2080
Cfr13I	GGNCC	3 cut(s)	397, 810, 1929
ClaI	ATCGAT	1 cut(s)	381
CseI	GACGC	1 cut(s)	194
CsiI	ACCWGGT	1 cut(s)	169
Csp6I	GTAC	7 cut(s)	215, 463, 952, 1125, 1169, 1384, 1393
CspCI	CAANNNNNGTGG	2 cut(s)	1231, 1266
CviAII	CATG	6 cut(s)	1332, 1603, 1820, 1878, 2023, 2226
CviQI	GTAC	7 cut(s)	215, 463, 952, 1125, 1169, 1384, 1393
DdeI	CTNAG	8 cut(s)	420, 705, 778, 948, 1049, 2085, 2146, 2214
Eam1104I	CTCTTC	2 cut(s)	48, 1716
EarI	CTCTTC	2 cut(s)	48, 1716
EciI	GGCGGA	2 cut(s)	381, 2131
Ecl136II	GAGCTC	1 cut(s)	1470
Eco130I	CCWWGG	3 cut(s)	1194, 1403, 1452
Eco147I	AGGCCT	1 cut(s)	1757
Eco24I	GRGCYC	2 cut(s)	92, 1472
Eco31I	GGTCTC	2 cut(s)	79, 2005
Eco32I	GATATC	1 cut(s)	313
Eco47I	GGWCC	1 cut(s)	397
Eco47III	AGCGCT	1 cut(s)	1149
Eco53kI	GAGCTC	1 cut(s)	1470
Eco57I	CTGAAG	2 cut(s)	1047, 1697
Eco72I	CACGTG	1 cut(s)	146
Eco81I	CCTNAGG	1 cut(s)	778
EcoICRI	GAGCTC	1 cut(s)	1470
EcoO109I	RGGNCCY	1 cut(s)	397
EcoRI	GAATTC	1 cut(s)	783
EcoRII	CCWGG	4 cut(s)	169, 508, 2038, 2152
EcoRV	GATATC	1 cut(s)	313
EcoT14I	CCWWGG	3 cut(s)	1194, 1403, 1452
EcoT22I	ATGCAT	1 cut(s)	1825
EcoT38I	GRGCYC	2 cut(s)	92, 1472
ErhI	CCWWGG	3 cut(s)	1194, 1403, 1452
FaeI	CATG	6 cut(s)	1335, 1606, 1823, 1881, 2026, 2229
FalI	AAGNNNNNCTT	2 cut(s)	668, 700
FaqI	GGGAC	2 cut(s)	1435, 1895
FatI	CATG	6 cut(s)	1331, 1602, 1819, 1877, 2022, 2225
FauNDI	CATATG	1 cut(s)	806
FbaI	TGATCA	1 cut(s)	82
Fnu4HI	GCNGC	8 cut(s)	66, 128, 1026, 1506, 1817, 1971, 2210, 2223
FokI	GGATG	5 cut(s)	381, 872, 1178, 1211, 2249
FriOI	GRGCYC	2 cut(s)	92, 1472
Fsp4HI	GCNGC	8 cut(s)	66, 128, 1026, 1506, 1817, 1971, 2210, 2223
FspBI	CTAG	6 cut(s)	99, 177, 210, 1595, 1974, 2016
GlaI	GCGC	2 cut(s)	1149, 2044
GluI	GCNGC	8 cut(s)	66, 128, 1026, 1506, 1817, 1971, 2210, 2223
GsaI	CCCAGC	2 cut(s)	1378, 1422
GsuI	CTGGAG	3 cut(s)	1201, 1812, 2136
HaeII	RGCGCY	1 cut(s)	1151
HaeIII	GGCC	3 cut(s)	811, 1757, 1931
HapII	CCGG	4 cut(s)	623, 1289, 1926, 2081
HgaI	GACGC	1 cut(s)	194
HhaI	GCGC	2 cut(s)	1150, 2045
Hin1II	CATG	6 cut(s)	1335, 1606, 1823, 1881, 2026, 2229
Hin6I	GCGC	2 cut(s)	1148, 2043
HinP1I	GCGC	2 cut(s)	1148, 2043
HincII	GTYRAC	2 cut(s)	349, 2052
HindII	GTYRAC	2 cut(s)	349, 2052
HinfI	GANTC	5 cut(s)	751, 1294, 1399, 1606, 2095
HpaI	GTTAAC	2 cut(s)	349, 2052
HpaII	CCGG	4 cut(s)	623, 1289, 1926, 2081
HphI	GGTGA	7 cut(s)	367, 466, 612, 913, 1037, 1703, 2152
Hpy166II	GTNNAC	9 cut(s)	198, 207, 215, 349, 375, 1614, 1661, 1669, 2052
Hpy8I	GTNNAC	9 cut(s)	198, 207, 215, 349, 375, 1614, 1661, 1669, 2052
HpyAV	CCTTC	7 cut(s)	251, 322, 726, 1516, 1639, 1775, 2148
HpyCH4IV	ACGT	1 cut(s)	145
HpyCH4V	TGCA	9 cut(s)	404, 911, 1069, 1505, 1517, 1547, 1819, 1823, 2225
HpyF10VI	GCNNNNNNNGC	4 cut(s)	869, 1075, 1514, 2134
HpyF3I	CTNAG	8 cut(s)	420, 705, 778, 948, 1049, 2085, 2146, 2214
HpySE526I	ACGT	1 cut(s)	145
Hsp92II	CATG	6 cut(s)	1335, 1606, 1823, 1881, 2026, 2229
HspAI	GCGC	2 cut(s)	1148, 2043
Kpn2I	TCCGGA	1 cut(s)	1288
Ksp22I	TGATCA	1 cut(s)	82
KspAI	GTTAAC	2 cut(s)	349, 2052
LmnI	GCTCC	9 cut(s)	6, 95, 260, 1100, 1220, 1467, 1793, 2095, 2155
Lsp1109I	GCAGC	7 cut(s)	77, 1037, 1517, 1803, 1957, 2209, 2221
LweI	GCATC	4 cut(s)	850, 898, 1534, 1684
MabI	ACCWGGT	1 cut(s)	169
MaeI	CTAG	6 cut(s)	99, 177, 210, 1595, 1974, 2016
MaeII	ACGT	1 cut(s)	145
MaeIII	GTNAC	3 cut(s)	814, 1537, 1807
MfeI	CAATTG	1 cut(s)	2072
MflI	RGATCY	3 cut(s)	280, 737, 2168
MhlI	GDGCHC	3 cut(s)	19, 92, 1472
MmeI	TCCRAC	2 cut(s)	268, 1922
MnlI	CCTC	8 cut(s)	619, 787, 1374, 1519, 1768, 2076, 2080, 2208
Mph1103I	ATGCAT	1 cut(s)	1825
MroI	TCCGGA	1 cut(s)	1288
MslI	CAYNNNNRTG	1 cut(s)	1277
MspA1I	CMGCKG	1 cut(s)	1970
MspI	CCGG	4 cut(s)	623, 1289, 1926, 2081
MspR9I	CCNGG	5 cut(s)	171, 510, 1927, 2040, 2154
MunI	CAATTG	1 cut(s)	2072
MvaI	CCWGG	4 cut(s)	171, 510, 2040, 2154
MwoI	GCNNNNNNNGC	4 cut(s)	869, 1075, 1514, 2134
NciI	CCSGG	1 cut(s)	1927
NdeI	CATATG	1 cut(s)	806
NlaIII	CATG	6 cut(s)	1335, 1606, 1823, 1881, 2026, 2229
NlaIV	GGNNCC	4 cut(s)	91, 792, 1930, 2091
NmuCI	GTSAC	1 cut(s)	814
NsiI	ATGCAT	1 cut(s)	1825
NspI	RCATGY	2 cut(s)	1823, 2229
NspV	TTCGAA	1 cut(s)	1091
PaeI	GCATGC	2 cut(s)	1823, 2229
PagI	TCATGA	1 cut(s)	1602
PceI	AGGCCT	1 cut(s)	1757
PfeI	GAWTC	5 cut(s)	751, 1294, 1399, 1606, 2095
PkrI	GCNGC	8 cut(s)	67, 129, 1027, 1507, 1818, 1972, 2211, 2224
PmaCI	CACGTG	1 cut(s)	146
PmlI	CACGTG	1 cut(s)	146
Ppu21I	YACGTR	1 cut(s)	146
PpuMI	RGGWCCY	1 cut(s)	397
PshBI	ATTAAT	1 cut(s)	1554
PsiI	TTATAA	1 cut(s)	2004
Psp124BI	GAGCTC	1 cut(s)	1472
Psp5II	RGGWCCY	1 cut(s)	397
Psp6I	CCWGG	4 cut(s)	169, 508, 2038, 2152
PspCI	CACGTG	1 cut(s)	146
PspFI	CCCAGC	2 cut(s)	1374, 1418
PspGI	CCWGG	4 cut(s)	169, 508, 2038, 2152
PspN4I	GGNNCC	4 cut(s)	91, 792, 1930, 2091
PspPI	GGNCC	3 cut(s)	397, 810, 1929
PspPPI	RGGWCCY	1 cut(s)	397
PsuI	RGATCY	3 cut(s)	280, 737, 2168
PvuII	CAGCTG	1 cut(s)	1970
RsaI	GTAC	7 cut(s)	216, 464, 953, 1126, 1170, 1385, 1394
RsaNI	GTAC	7 cut(s)	215, 463, 952, 1125, 1169, 1384, 1393
RseI	CAYNNNNRTG	1 cut(s)	1277
SacI	GAGCTC	1 cut(s)	1472
SatI	GCNGC	8 cut(s)	66, 128, 1026, 1506, 1817, 1971, 2210, 2223
Sau96I	GGNCC	3 cut(s)	397, 810, 1929
ScrFI	CCNGG	5 cut(s)	171, 510, 1927, 2040, 2154
SduI	GDGCHC	3 cut(s)	19, 92, 1472
SexAI	ACCWGGT	1 cut(s)	169
SfaNI	GCATC	4 cut(s)	850, 898, 1534, 1684
SfcI	CTRYAG	1 cut(s)	2172
SfuI	TTCGAA	1 cut(s)	1091
SinI	GGWCC	1 cut(s)	397
SmiMI	CAYNNNNRTG	1 cut(s)	1277
SmlI	CTYRAG	4 cut(s)	392, 559, 1429, 1872
SmoI	CTYRAG	4 cut(s)	392, 559, 1429, 1872
SpeI	ACTAGT	2 cut(s)	98, 209
SphI	GCATGC	2 cut(s)	1823, 2229
SseBI	AGGCCT	1 cut(s)	1757
SsiI	CCGC	4 cut(s)	128, 366, 1107, 2142
SspI	AATATT	1 cut(s)	526
SspMI	CTAG	6 cut(s)	99, 177, 210, 1595, 1974, 2016
SstI	GAGCTC	1 cut(s)	1472
StuI	AGGCCT	1 cut(s)	1757
StyD4I	CCNGG	5 cut(s)	169, 508, 1925, 2038, 2152
StyI	CCWWGG	3 cut(s)	1194, 1403, 1452
TaiI	ACGT	1 cut(s)	148
TaqI	TCGA	6 cut(s)	381, 436, 1091, 1173, 1677, 1845
TatI	WGTACW	3 cut(s)	1124, 1168, 1392
TauI	GCSGC	1 cut(s)	130
TfiI	GAWTC	5 cut(s)	751, 1294, 1399, 1606, 2095
TscAI	CASTG	6 cut(s)	110, 988, 1071, 1795, 2052, 2106
TseFI	GTSAC	1 cut(s)	814
TseI	GCWGC	7 cut(s)	65, 1025, 1505, 1816, 1970, 2209, 2222
Tsp45I	GTSAC	1 cut(s)	814
TspDTI	ATGAA	7 cut(s)	751, 952, 1157, 1226, 1649, 1905, 2039
TspGWI	ACGGA	1 cut(s)	366
TspRI	CASTG	6 cut(s)	110, 988, 1071, 1795, 2052, 2106
VpaK11BI	GGWCC	1 cut(s)	397
VspI	ATTAAT	1 cut(s)	1554
XapI	RAATTY	3 cut(s)	267, 783, 1637
XceI	RCATGY	2 cut(s)	1823, 2229
XspI	CTAG	6 cut(s)	99, 177, 210, 1595, 1974, 2016
Zsp2I	ATGCAT	1 cut(s)	1825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.