Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002327

Physical Location & Seq

Genomic Coordinates Reverse (-)

78180001 .. 78185142

Gene Structure 5142 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00056420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGTGGAGCTCTTGTGCTCTGGTTGTTATACTACTTGCTTCTCTTCTTCTTCTTCTTCACTTGGTAGCTCTGGTCTCTGCTGATCAGGGCTCCACCACTAGTCAGTGGCAAACACTCAAAGATCTGCTACTGAATAACAATTCTAATGTTGATATCATCTATCCAAAGAAGGACAAGACTTACATAGTTAATGGAGTTCCTACTGGCGGATGGTTCACCATCGATTATACTCTCAAGGACCTTGCAAATGTTTATATTACTCAGGGAGTATTTAGTCGAGCTAATAGGTTTGATGACAATATGTACCCAATTCTCACCGTTGAAGATGTGGCTATGAATTTGACACCATCAGGCTTATGGTTGAATATTGAGAACAATATCTTCTTCTCACAACACAACTTGAGTATGAGAAACTTTGTGCTTACTGTAATGAGAAAAGTGGTTGTGAATTATATCTCATCACCGGAGGTGGCTTTCCTGAACAATATTAAAGGAGTTGTTAGTCCAAGAACTACTAGGTTGGTCTTTCGATTTCTGGAACAAACTGAGATTGAGCCTTCAACCAATCAAACTTATGGATCTCTGTTAAAGAATCTCACATTCATCAAGACATTTGCCTCAGGAATTCTAGTTCCTAAAACTTACATATGGCCAGTCACTAATGACAATTATTTAGAACCACACACTTCACTTGTTTTGGATGCCCATGAAGCAGAACTAATGGTATTTGCGTCCGATTTGGTGAATGATGTGCCATTACCCTACAACTACAGTTATGATCCATTAGCCGAGTGCCTGTCTTTCATAGACAATGGCAACTTCACTGTTGATGGTGTGCTGTCTGACTTTCCGATAACTCCATCAGCAGCCATAGATTGCTTTGCTCACCTAAGACAAAATGCTCCAGTGCAAGCAAGTATATCAAACCCCCAGCAGACTCGGTACAAGTTGTACAGGAATCCAAGGTTCAAAAATGCTGGGACTTACTTGAGACTATCTGATTTTTTTACCTTGGCAAAGAACAGGAGCTCTGTTTCAGGTGTCTTAATCAGCGTAGAGGCGAGTAGTTCAAAGTTTATCTGCCTGTATGCAGCATATCTTGCAGAGAAGCAGGGATTAAGTGTAACAGATGCAGTCATTAATGAGTTGAACAAAGCTGGTTTGGACAGTCAGACAGCCCTAGATGTCATGATTCAGTCCACTAACAGTTCTGTTCTAATGAAATTTAAGGAGGAAAGCAAGTGTAAACTTGTTTACAAGATTGAAGAAGTTATTGGTGATGCTCTTAATACAACTCTTCAGGACATCAAGAAGTTTGCCAATTCTGTGGTCATCAACAAGGCCTCCGTCCTTCCTGAAAATAATGAATACATCACCGGAGTAACAAATGTTGTGACAAAGCTGCATGCATTTGATCTTCCTGTTTATGTTGAACTGTTCAGCAATGAGTATGTATCTCAAGCATGGGACTTCTTCTCTGATCCAACTGTTGAGATCAATTCTTTTGTCTCGGGGGCCAATGTTGATGGTGTTATCACAGACTTCCCCAAAACAGCTGCTAGATATAAAAGAAACAGGTGTTTATTTTATAAAGAGAGACCTAGCTACATGAAGCCTGTTCCGCCAGGCGTGCTGTTAACAGTTGTTTCTCCTCTTCAATTGCCACCGGCTGAGGCTCCAAATCCAGTGCTGACAGAGAGTGATGTGATCGAGCCACCTTTGCCTTCCGCCTTAGCTCCAGGGATCACCAATGGATCTACAGTAGCACCACCACCACTACCTCCAAACGGGCAGCCTAAGATTGCTGCATGCTTCTTTCTCTCAAATCTGGCTTTGCTTGTTGCCACCCTTTTACTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006968 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008889 GO:0009505 GO:0009506 GO:0009653 GO:0009664 GO:0009791 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010016 GO:0010026 GO:0010052 GO:0010053 GO:0010054 GO:0010103 GO:0010374 GO:0010383 GO:0010441 GO:0010442 GO:0016020 GO:0016043 GO:0016049 GO:0016787 GO:0016788 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030243 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0046872 GO:0048364 GO:0048367 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0052541 GO:0055044 GO:0060560 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

GDPD

Protein Analysis

620

Amino Acids

68.58

Weight (kDa)

5.37

Isoelectric Point (pI)

41.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDPD	PF03009	372 - 518	1.7e-07	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66970 AT1G66970 AT1G66970 AT4G26690
fragaria_vesca	FvH4_3g13670 FvH4_3g13670 FvH4_3g13670 FvH4_3g30290 FvH4_3g30290
malus_domestica	MD03G1190400.v1.1 MD11G1207100.v1.1
prunus_persica	Prupe.4G228400_v2.0.a1 Prupe.4G228400_v2.0.a1
pyrus_communis	pycom03g14330 pycom03g14370 pycom11g18010
rosa_chinensis	RchiOBHm_Chr5g0022921 RchiOBHm_Chr5g0056171
rosa_laevigata	RLG00000032682 RLG00000035057 RLG00000035060
rosa_multiflora	Rmu_sc0000680.1_g000027 Rmu_sc0001787.1_g000024 Rmu_sc0002675.1_g000001
rosa_roxburghii	Rroxscaffold_1G00024130 Rroxscaffold_1G00056420
rosa_rugosa	Rorug05G0075500 Rorug05G0297800 Rorug05G0297800
rosa_samantha	Rh5AG162000 Rh5AG368900 Rh5BG161200 Rh5BG379900 Rh5CG175800 Rh5CG402700 Rh5DG162500 Rh5DG392700 Rh5DG392900
rosa_wichuraiana	Rw0G004450 Rw0G012690 Rw5G014580 Rw5G034630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1590
AciI	CCGC	3 cut(s)	207, 1622, 1728
AclWI	GGATC	5 cut(s)	586, 773, 1475, 1751, 1762
AcoI	YGGCCR	1 cut(s)	650
AcsI	RAATTY	3 cut(s)	337, 624, 1223
AcuI	CTGAAG	1 cut(s)	1283
AfaI	GTAC	3 cut(s)	305, 944, 953
AfiI	CCNNNNNNNGG	2 cut(s)	206, 1787
AgsI	TTSAA	9 cut(s)	323, 364, 561, 970, 1071, 1150, 1265, 1433, 1658
AhlI	ACTAGT	1 cut(s)	98
AjnI	CCWGG	2 cut(s)	1624, 1738
AjuI	GAANNNNNNNTTGG	2 cut(s)	1257, 1289
AloI	GAACNNNNNNTCC	2 cut(s)	615, 647
AluBI	AGCT	9 cut(s)	9, 68, 281, 1029, 1157, 1402, 1556, 1605, 1736
AluI	AGCT	9 cut(s)	9, 68, 281, 1029, 1157, 1402, 1556, 1605, 1736
Alw21I	GWGCWC	3 cut(s)	11, 19, 1031
Alw26I	GTCTC	4 cut(s)	79, 985, 1513, 1591
AlwI	GGATC	5 cut(s)	586, 773, 1475, 1751, 1762
Ama87I	CYCGRG	1 cut(s)	1510
AoxI	GGCC	3 cut(s)	650, 1341, 1515
ApeKI	GCWGC	6 cut(s)	866, 1091, 1402, 1556, 1792, 1805
ApoI	RAATTY	3 cut(s)	337, 624, 1223
AseI	ATTAAT	1 cut(s)	1140
AspS9I	GGNCC	2 cut(s)	238, 1515
AsuHPI	GGTGA	8 cut(s)	208, 307, 453, 754, 878, 1289, 1366, 1738
AvaI	CYCGRG	1 cut(s)	1510
AvaII	GGWCC	1 cut(s)	238
AxyI	CCTNAGG	1 cut(s)	619
BalI	TGGCCA	1 cut(s)	652
BanII	GRGCYC	3 cut(s)	11, 92, 1031
Bbv12I	GWGCWC	3 cut(s)	11, 19, 1031
BbvCI	CCTCAGC	1 cut(s)	1671
BbvI	GCAGC	6 cut(s)	878, 1103, 1389, 1543, 1792, 1804
BccI	CCATC	6 cut(s)	204, 227, 355, 824, 868, 1520
BciT130I	CCWGG	2 cut(s)	1626, 1740
BclI	TGATCA	1 cut(s)	82
BcoDI	GTCTC	4 cut(s)	79, 985, 1513, 1591
BcuI	ACTAGT	1 cut(s)	98
BfaI	CTAG	6 cut(s)	99, 516, 629, 1181, 1560, 1602
BfmI	CTRYAG	2 cut(s)	769, 1758
BglII	AGATCT	1 cut(s)	121
BisI	GCNGC	6 cut(s)	867, 1092, 1403, 1557, 1793, 1806
BlsI	GCNGC	6 cut(s)	868, 1093, 1404, 1558, 1794, 1807
Bme1390I	CCNGG	2 cut(s)	1626, 1740
Bme18I	GGWCC	1 cut(s)	238
BmeT110I	CYCGRG	1 cut(s)	1510
BmgT120I	GGNCC	2 cut(s)	238, 1515
BmiI	GGNNCC	3 cut(s)	91, 1516, 1677
BmrFI	CCNGG	2 cut(s)	1626, 1740
BmsI	GCATC	3 cut(s)	691, 1120, 1270
BpmI	CTGGAG	2 cut(s)	888, 1722
Bpu10I	CCTNAGC	2 cut(s)	1671, 1732
BpuEI	CTTGAG	4 cut(s)	218, 421, 1009, 1443
Bsa29I	ATCGAT	1 cut(s)	222
BsaI	GGTCTC	2 cut(s)	79, 1591
BsaJI	CCNNGG	3 cut(s)	962, 1011, 1739
BsaWI	WCCGGW	2 cut(s)	463, 1376
BsaXI	ACNNNNNCTCC	3 cut(s)	28, 1328, 1358
Bsc4I	CCNNNNNNNGG	2 cut(s)	206, 1787
Bse118I	RCCGGY	1 cut(s)	1666
Bse1I	ACTGG	4 cut(s)	208, 653, 905, 1685
Bse21I	CCTNAGG	1 cut(s)	619
Bse3DI	GCAATG	1 cut(s)	1450
BseBI	CCWGG	2 cut(s)	1626, 1740
BseCI	ATCGAT	1 cut(s)	222
BseDI	CCNNGG	3 cut(s)	962, 1011, 1739
BseGI	GGATG	2 cut(s)	215, 706
BseLI	CCNNNNNNNGG	2 cut(s)	206, 1787
BseMI	GCAATG	1 cut(s)	1450
BseMII	CTCAG	4 cut(s)	275, 537, 633, 1662
BseNI	ACTGG	4 cut(s)	208, 653, 905, 1685
BseRI	GAGGAG	1 cut(s)	1641
BseXI	GCAGC	6 cut(s)	878, 1103, 1389, 1543, 1792, 1804
BseYI	CCCAGC	2 cut(s)	930, 977
BshFI	GGCC	3 cut(s)	652, 1343, 1517
BshVI	ATCGAT	1 cut(s)	222
BsiHKAI	GWGCWC	3 cut(s)	11, 19, 1031
BsiHKCI	CYCGRG	1 cut(s)	1510
BsiSI	CCGG	3 cut(s)	464, 1377, 1667
BslFI	GGGAC	2 cut(s)	994, 1481
BslI	CCNNNNNNNGG	2 cut(s)	206, 1787
BsmAI	GTCTC	4 cut(s)	79, 985, 1513, 1591
BsmFI	GGGAC	2 cut(s)	994, 1481
BsnI	GGCC	3 cut(s)	652, 1343, 1517
Bso31I	GGTCTC	2 cut(s)	79, 1591
BsoBI	CYCGRG	1 cut(s)	1510
Bsp1286I	GDGCHC	4 cut(s)	11, 19, 92, 1031
Bsp1407I	TGTACA	1 cut(s)	951
BspACI	CCGC	3 cut(s)	207, 1622, 1728
BspANI	GGCC	3 cut(s)	652, 1343, 1517
BspCNI	CTCAG	4 cut(s)	274, 538, 632, 1663
BspDI	ATCGAT	1 cut(s)	222
BspHI	TCATGA	1 cut(s)	1188
BspLI	GGNNCC	3 cut(s)	91, 1516, 1677
BspPI	GGATC	5 cut(s)	586, 773, 1475, 1751, 1762
BspTNI	GGTCTC	2 cut(s)	79, 1591
BsrDI	GCAATG	1 cut(s)	1450
BsrFI	RCCGGY	1 cut(s)	1666
BsrGI	TGTACA	1 cut(s)	951
BsrI	ACTGG	4 cut(s)	208, 653, 905, 1685
BssAI	RCCGGY	1 cut(s)	1666
BssECI	CCNNGG	3 cut(s)	962, 1011, 1739
BssT1I	CCWWGG	2 cut(s)	962, 1011
Bst2UI	CCWGG	2 cut(s)	1626, 1740
Bst6I	CTCTTC	3 cut(s)	48, 1302, 1659
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstAUI	TGTACA	1 cut(s)	951
BstC8I	GCNNGC	4 cut(s)	912, 1407, 1631, 1810
BstDEI	CTNAG	7 cut(s)	261, 546, 619, 890, 1671, 1732, 1797
BstF5I	GGATG	2 cut(s)	215, 706
BstMAI	GTCTC	4 cut(s)	79, 985, 1513, 1591
BstMWI	GCNNNNNNNGC	5 cut(s)	710, 1100, 1621, 1630, 1720
BstNI	CCWGG	2 cut(s)	1626, 1740
BstNSI	RCATGY	2 cut(s)	1409, 1812
BstSCI	CCNGG	2 cut(s)	1624, 1738
BstSFI	CTRYAG	2 cut(s)	769, 1758
BstV1I	GCAGC	6 cut(s)	878, 1103, 1389, 1543, 1792, 1804
BstX2I	RGATCY	3 cut(s)	121, 578, 1754
BstXI	CCANNNNNNTGG	1 cut(s)	1327
BstYI	RGATCY	3 cut(s)	121, 578, 1754
Bsu15I	ATCGAT	1 cut(s)	222
Bsu36I	CCTNAGG	1 cut(s)	619
BsuRI	GGCC	3 cut(s)	652, 1343, 1517
BsuTUI	ATCGAT	1 cut(s)	222
BtsCI	GGATG	2 cut(s)	215, 706
BtsIMutI	CAGTG	4 cut(s)	110, 822, 912, 1692
Cac8I	GCNNGC	4 cut(s)	912, 1407, 1631, 1810
CciI	TCATGA	1 cut(s)	1188
Cfr10I	RCCGGY	1 cut(s)	1666
Cfr13I	GGNCC	2 cut(s)	238, 1515
ClaI	ATCGAT	1 cut(s)	222
CseI	GACGC	1 cut(s)	720
Csp6I	GTAC	3 cut(s)	304, 943, 952
CviAII	CATG	6 cut(s)	707, 1189, 1406, 1464, 1609, 1809
CviQI	GTAC	3 cut(s)	304, 943, 952
DdeI	CTNAG	7 cut(s)	261, 546, 619, 890, 1671, 1732, 1797
EaeI	YGGCCR	1 cut(s)	650
Eam1104I	CTCTTC	3 cut(s)	48, 1302, 1659
EarI	CTCTTC	3 cut(s)	48, 1302, 1659
EciI	GGCGGA	3 cut(s)	222, 1611, 1717
Ecl136II	GAGCTC	2 cut(s)	9, 1029
Eco130I	CCWWGG	2 cut(s)	962, 1011
Eco147I	AGGCCT	1 cut(s)	1343
Eco24I	GRGCYC	3 cut(s)	11, 92, 1031
Eco31I	GGTCTC	2 cut(s)	79, 1591
Eco32I	GATATC	1 cut(s)	154
Eco47I	GGWCC	1 cut(s)	238
Eco53kI	GAGCTC	2 cut(s)	9, 1029
Eco57I	CTGAAG	1 cut(s)	1283
Eco81I	CCTNAGG	1 cut(s)	619
Eco88I	CYCGRG	1 cut(s)	1510
EcoICRI	GAGCTC	2 cut(s)	9, 1029
EcoO109I	RGGNCCY	1 cut(s)	238
EcoRI	GAATTC	1 cut(s)	624
EcoRII	CCWGG	2 cut(s)	1624, 1738
EcoRV	GATATC	1 cut(s)	154
EcoT14I	CCWWGG	2 cut(s)	962, 1011
EcoT22I	ATGCAT	1 cut(s)	1411
EcoT38I	GRGCYC	3 cut(s)	11, 92, 1031
ErhI	CCWWGG	2 cut(s)	962, 1011
FaeI	CATG	6 cut(s)	710, 1192, 1409, 1467, 1612, 1812
FaqI	GGGAC	2 cut(s)	994, 1481
FatI	CATG	6 cut(s)	706, 1188, 1405, 1463, 1608, 1808
FauNDI	CATATG	1 cut(s)	647
FbaI	TGATCA	1 cut(s)	82
Fnu4HI	GCNGC	6 cut(s)	867, 1092, 1403, 1557, 1793, 1806
FokI	GGATG	2 cut(s)	222, 713
FriOI	GRGCYC	3 cut(s)	11, 92, 1031
Fsp4HI	GCNGC	6 cut(s)	867, 1092, 1403, 1557, 1793, 1806
FspBI	CTAG	6 cut(s)	99, 516, 629, 1181, 1560, 1602
GluI	GCNGC	6 cut(s)	867, 1092, 1403, 1557, 1793, 1806
GsaI	CCCAGC	2 cut(s)	934, 981
GsuI	CTGGAG	2 cut(s)	888, 1722
HaeIII	GGCC	3 cut(s)	652, 1343, 1517
HapII	CCGG	3 cut(s)	464, 1377, 1667
HgaI	GACGC	1 cut(s)	720
Hin1II	CATG	6 cut(s)	710, 1192, 1409, 1467, 1612, 1812
HincII	GTYRAC	1 cut(s)	1638
HindII	GTYRAC	1 cut(s)	1638
HinfI	GANTC	4 cut(s)	592, 937, 958, 1192
HpaI	GTTAAC	1 cut(s)	1638
HpaII	CCGG	3 cut(s)	464, 1377, 1667
HphI	GGTGA	8 cut(s)	208, 307, 453, 754, 878, 1289, 1366, 1738
Hpy166II	GTNNAC	5 cut(s)	216, 1200, 1247, 1255, 1638
Hpy188I	TCNGA	6 cut(s)	736, 844, 852, 1000, 1173, 1480
Hpy188III	TCNNGA	8 cut(s)	478, 536, 607, 621, 1189, 1301, 1309, 1355
Hpy8I	GTNNAC	5 cut(s)	216, 1200, 1247, 1255, 1638
HpyAV	CCTTC	4 cut(s)	163, 567, 1361, 1734
HpyCH4V	TGCA	8 cut(s)	245, 910, 1091, 1103, 1133, 1405, 1409, 1808
HpyF10VI	GCNNNNNNNGC	5 cut(s)	710, 1100, 1621, 1630, 1720
HpyF3I	CTNAG	7 cut(s)	261, 546, 619, 890, 1671, 1732, 1797
Hsp92II	CATG	6 cut(s)	710, 1192, 1409, 1467, 1612, 1812
Ksp22I	TGATCA	1 cut(s)	82
KspAI	GTTAAC	1 cut(s)	1638
LmnI	GCTCC	6 cut(s)	6, 95, 907, 1026, 1681, 1741
Lsp1109I	GCAGC	6 cut(s)	878, 1103, 1389, 1543, 1792, 1804
LweI	GCATC	3 cut(s)	691, 1120, 1270
MaeI	CTAG	6 cut(s)	99, 516, 629, 1181, 1560, 1602
MaeIII	GTNAC	4 cut(s)	655, 1123, 1381, 1393
MfeI	CAATTG	1 cut(s)	1658
MflI	RGATCY	3 cut(s)	121, 578, 1754
MhlI	GDGCHC	4 cut(s)	11, 19, 92, 1031
MlsI	TGGCCA	1 cut(s)	652
MluNI	TGGCCA	1 cut(s)	652
MlyI	GAGTC	1 cut(s)	931
MmeI	TCCRAC	1 cut(s)	1508
MnlI	CCTC	8 cut(s)	460, 628, 1051, 1225, 1354, 1662, 1666, 1791
Mox20I	TGGCCA	1 cut(s)	652
Mph1103I	ATGCAT	1 cut(s)	1411
MscI	TGGCCA	1 cut(s)	652
MseI	TTAA	9 cut(s)	189, 489, 587, 1046, 1118, 1140, 1227, 1287, 1637
Msp20I	TGGCCA	1 cut(s)	652
MspA1I	CMGCKG	1 cut(s)	1556
MspI	CCGG	3 cut(s)	464, 1377, 1667
MspR9I	CCNGG	2 cut(s)	1626, 1740
MunI	CAATTG	1 cut(s)	1658
MvaI	CCWGG	2 cut(s)	1626, 1740
MwoI	GCNNNNNNNGC	5 cut(s)	710, 1100, 1621, 1630, 1720
NdeI	CATATG	1 cut(s)	647
NlaIII	CATG	6 cut(s)	710, 1192, 1409, 1467, 1612, 1812
NlaIV	GGNNCC	3 cut(s)	91, 1516, 1677
NmeAIII	GCCGAG	1 cut(s)	814
NmuCI	GTSAC	2 cut(s)	655, 1393
NsiI	ATGCAT	1 cut(s)	1411
NspI	RCATGY	2 cut(s)	1409, 1812
PaeI	GCATGC	2 cut(s)	1409, 1812
PagI	TCATGA	1 cut(s)	1188
PceI	AGGCCT	1 cut(s)	1343
PfeI	GAWTC	3 cut(s)	592, 958, 1192
PkrI	GCNGC	6 cut(s)	868, 1093, 1404, 1558, 1794, 1807
PleI	GAGTC	1 cut(s)	931
PpsI	GAGTC	1 cut(s)	931
PpuMI	RGGWCCY	1 cut(s)	238
PshBI	ATTAAT	1 cut(s)	1140
PsiI	TTATAA	1 cut(s)	1590
Psp124BI	GAGCTC	2 cut(s)	11, 1031
Psp5II	RGGWCCY	1 cut(s)	238
Psp6I	CCWGG	2 cut(s)	1624, 1738
PspFI	CCCAGC	2 cut(s)	930, 977
PspGI	CCWGG	2 cut(s)	1624, 1738
PspN4I	GGNNCC	3 cut(s)	91, 1516, 1677
PspPI	GGNCC	2 cut(s)	238, 1515
PspPPI	RGGWCCY	1 cut(s)	238
PsuI	RGATCY	3 cut(s)	121, 578, 1754
PvuII	CAGCTG	1 cut(s)	1556
RsaI	GTAC	3 cut(s)	305, 944, 953
RsaNI	GTAC	3 cut(s)	304, 943, 952
SacI	GAGCTC	2 cut(s)	11, 1031
SaqAI	TTAA	9 cut(s)	189, 489, 587, 1046, 1118, 1140, 1227, 1287, 1637
SatI	GCNGC	6 cut(s)	867, 1092, 1403, 1557, 1793, 1806
Sau96I	GGNCC	2 cut(s)	238, 1515
SchI	GAGTC	1 cut(s)	931
ScrFI	CCNGG	2 cut(s)	1626, 1740
SduI	GDGCHC	4 cut(s)	11, 19, 92, 1031
SfaNI	GCATC	3 cut(s)	691, 1120, 1270
SfcI	CTRYAG	2 cut(s)	769, 1758
SinI	GGWCC	1 cut(s)	238
SmlI	CTYRAG	4 cut(s)	233, 400, 988, 1458
SmoI	CTYRAG	4 cut(s)	233, 400, 988, 1458
SpeI	ACTAGT	1 cut(s)	98
SphI	GCATGC	2 cut(s)	1409, 1812
SseBI	AGGCCT	1 cut(s)	1343
SsiI	CCGC	3 cut(s)	207, 1622, 1728
SspI	AATATT	2 cut(s)	367, 487
SspMI	CTAG	6 cut(s)	99, 516, 629, 1181, 1560, 1602
SstI	GAGCTC	2 cut(s)	11, 1031
StuI	AGGCCT	1 cut(s)	1343
StyD4I	CCNGG	2 cut(s)	1624, 1738
StyI	CCWWGG	2 cut(s)	962, 1011
TaqI	TCGA	4 cut(s)	222, 277, 529, 1710
TatI	WGTACW	1 cut(s)	951
TfiI	GAWTC	3 cut(s)	592, 958, 1192
Tru1I	TTAA	9 cut(s)	189, 489, 587, 1046, 1118, 1140, 1227, 1287, 1637
Tru9I	TTAA	9 cut(s)	189, 489, 587, 1046, 1118, 1140, 1227, 1287, 1637
TscAI	CASTG	4 cut(s)	110, 829, 912, 1692
TseFI	GTSAC	2 cut(s)	655, 1393
TseI	GCWGC	6 cut(s)	866, 1091, 1402, 1556, 1792, 1805
Tsp45I	GTSAC	2 cut(s)	655, 1393
TspDTI	ATGAA	7 cut(s)	350, 592, 723, 793, 1235, 1380, 1625
TspGWI	ACGGA	1 cut(s)	1336
TspRI	CASTG	4 cut(s)	110, 829, 912, 1692
VpaK11BI	GGWCC	1 cut(s)	238
VspI	ATTAAT	1 cut(s)	1140
XapI	RAATTY	3 cut(s)	337, 624, 1223
XceI	RCATGY	2 cut(s)	1409, 1812
XcmI	CCANNNNNNNNNTGG	1 cut(s)	354
XspI	CTAG	6 cut(s)	99, 516, 629, 1181, 1560, 1602
Zsp2I	ATGCAT	1 cut(s)	1411

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.