Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002327

Physical Location & Seq

Genomic Coordinates Forward (+)

17793324 .. 17798077

Gene Structure 4754 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032682

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2277 bp

ATGTGGAGCTCTTGTGCTCTGGTTGTTATACTACTTGCTTCTCTTCTTCTTCTTCACTTGGTAGCTCTGGTCTCTGCTGATCAGGGCTCCACCACTAGTCAGTGGCAAACACTCAAAGGCAACCCGCCTTTGGTCATAGCACGCGGGGGTTTTTCAGGACTATTACCTGGTTCTAGTTCTGACGCATACAAGTTCACATTGTCCACTAGTGTACTGGATGTGTTATTTTGGTGCGATGTCCAACTAACAAAGGAAGGAGCTGGAATTTGCTTTCCAGATCTGCTACTGAATAACAATTCTAATGTTGATATCATCTATCCAAAGAAGGACAAGACTTACATAGTTAACGGAGTTCCTACTGGTGGATGGTTCACCATCGATTATACTCTCAAGGACCTTTCAAATGTTTCTATTACTCAGGGAGTATTTAGTCGAGCTAATAGGTTTGATGACAATATGTACCCAATTCTCACCGTTGAAGATGTGGCTATCAATTTGACAGCACCAGGCTTATGGTTAAATATTGAGAACAATATCTTCTTCTCACAACACAACTTGAGCATGAGAAACTTTGTGCTTTCTGTAATGAGAAAAGTGGTTGTGAATTATATCTCATCACCGGAGGTGGCTTTCCTGAACAGCATTAAAGGAGTCGTTAATCCAAGAACTATTAAGTTGGTCTTTCGGTTTCTGGAACAAACTGAGATTGAGCCTTCAATCAATCAAACTTATGGATCTCTGTTAAAGAATCTCACATTCATCAAGACATTTGCCTCAGGAATTCTGGTTCCTAAAACTTACATATGGCCCGTCACTAATGACAATTATTTAGAACCACACACTTCACTTGTTTTGGATGCTCATACAGCAGAACTAACGGTATTTGTGTCTGATTTGGTGAATGATGCACCATTACCCTACAATTACAGTTATGATCCATTAGCTGAGTACCTGTCATTCATAGACAATGGAAACTTCACTGTTGATGGTGTGCTGTCTGACTTTCCAATAACTCCATCAGCAGCCATAGATTGCTTTGCTCACCTAAGACAAAATGCTTCAGTGCAAGACAAGCCTTTGGTTATTTCGAAAAATGGAGCAAGCGGAGACTACCCTGATTGTACTGATTTGGCATATATGAAAGCGCTTGAAGATGGTGTGGATGTACTCGATTGTCCTGTCCAAATGTCCAAGGATGGGATACCATTTTGCTCCAGTTCTATTAATCTCATTCATACCACAACAGTTGCTCAATCAAGTTTTCAGAACATCACAATGGTTGTTCCGGAGATTCAGGCTGACAATGGAATATATACCTTTAGCCTGACATGGGATCAGATCAAAACATTGCAGCCAAGTATATCAAACCCCCAGCAGAGGTACAAGTTGTACAGGAATCCAAGGTTCAAAAGTGCTGGGACTTACTTAAGACTATCTGATTTTTTTACCTTGGCAAAGAACAGGAGCTCTGTTTCAGGTGTCTTAATCAGCGTAGAGTATGCAGCATATCTTACAGAGAAGCAGGGATTAAGTGTAACAGATGCAGTCATTAATGAGTTGAACAAAGCTGGTTTGGACAATCAGACAGCCCTAGATGTCATGATTCAGTCCACTAATAGTTCTGTTCTAATGAAATTTAAGGAGAAAAGCAAGTGTAAACTCGTTTACAAGATTGAAGAAGTTATTGGTGATGCTCTTAATACAACTCTTAAGGACATCAAGAAGTTTGCCAATTCTGTGGTCATCAACAAGGCCTCTGTCCTTCCTGAAAATAAAGAATACATCACTGGAGTAACAAATGTTGTGACAAAGCTGCATGCATTTGATCTTCCTGTTTATGTTGAACTGTTCAGCAATGAGTATGTATCTCAAGCATGGGACTTCTTCTCTGATCCAACTGTTGAGATCAATTCATTTGTCTCGGGGGCCAACGTTGATGGTGTTATCACAGACTTCCCCAAAACAGCTGCTAGATACAAAAGAAACAGGTGCTTATTTTATAAAGAGAGACCTAGGTACATGAAGCCTGTTCCGCCAGGCGCGCTGTTAACAGTTGTTTCTCCTCTTCAATTGCCACCGGCTGAGGCTCCAAATCCAGTGCTGACAGAGAGTGATGTGATCGAGCCACCTTTGCCTTCCGCCTTAGGTCCAGGGATCACCAATGGATCTACAGTAGCACCACCACCACTACTACCTCCAAACGGGCGGCCTAAGATTGCTGCATGCTTCTTTCTCTCAAATCTGGCTTTGCTTGTTGCCACCCTTTTACTACTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006968 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008889 GO:0009505 GO:0009506 GO:0009653 GO:0009664 GO:0009791 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010016 GO:0010026 GO:0010052 GO:0010053 GO:0010054 GO:0010103 GO:0010374 GO:0010383 GO:0010441 GO:0010442 GO:0016020 GO:0016043 GO:0016049 GO:0016787 GO:0016788 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030243 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0046872 GO:0048364 GO:0048367 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0052541 GO:0055044 GO:0060560 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

GDPD

Protein Analysis

759

Amino Acids

83.41

Weight (kDa)

5.33

Isoelectric Point (pI)

35.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDPD	PF03009	366 - 655	1.1e-26	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Orthologous Genes (Group: OG0002327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66970 AT1G66970 AT1G66970 AT4G26690
fragaria_vesca	FvH4_3g13670 FvH4_3g13670 FvH4_3g13670 FvH4_3g30290 FvH4_3g30290
malus_domestica	MD03G1190400.v1.1 MD11G1207100.v1.1
prunus_persica	Prupe.4G228400_v2.0.a1 Prupe.4G228400_v2.0.a1
pyrus_communis	pycom03g14330 pycom03g14370 pycom11g18010
rosa_chinensis	RchiOBHm_Chr5g0022921 RchiOBHm_Chr5g0056171
rosa_laevigata	RLG00000032682 RLG00000035057 RLG00000035060
rosa_multiflora	Rmu_sc0000680.1_g000027 Rmu_sc0001787.1_g000024 Rmu_sc0002675.1_g000001
rosa_roxburghii	Rroxscaffold_1G00024130 Rroxscaffold_1G00056420
rosa_rugosa	Rorug05G0075500 Rorug05G0297800 Rorug05G0297800
rosa_samantha	Rh5AG162000 Rh5AG368900 Rh5BG161200 Rh5BG379900 Rh5CG175800 Rh5CG402700 Rh5DG162500 Rh5DG392700 Rh5DG392900
rosa_wichuraiana	Rw0G004450 Rw0G012690 Rw5G014580 Rw5G034630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2001
AccII	CGCG	2 cut(s)	144, 2042
AccIII	TCCGGA	1 cut(s)	1285
AciI	CCGC	6 cut(s)	125, 144, 1104, 2033, 2139, 2206
AclI	AACGTT	1 cut(s)	1932
AclWI	GGATC	6 cut(s)	742, 929, 1341, 1886, 2162, 2173
AcsI	RAATTY	3 cut(s)	264, 780, 1634
AcuI	CTGAAG	1 cut(s)	1044
AfaI	GTAC	8 cut(s)	213, 461, 950, 1123, 1167, 1382, 1391, 2018
AfeI	AGCGCT	1 cut(s)	1146
AfiI	CCNNNNNNNGG	6 cut(s)	130, 362, 1197, 1330, 1377, 2201
AflII	CTTAAG	2 cut(s)	1426, 1709
AgsI	TTSAA	9 cut(s)	402, 479, 717, 1151, 1408, 1561, 1676, 1844, 2069
AhlI	ACTAGT	2 cut(s)	95, 206
AjnI	CCWGG	4 cut(s)	166, 505, 2035, 2149
AjuI	GAANNNNNNNTTGG	2 cut(s)	1668, 1700
AloI	GAACNNNNNNTCC	2 cut(s)	771, 803
AluBI	AGCT	9 cut(s)	9, 65, 260, 437, 944, 1467, 1568, 1813, 1967
AluI	AGCT	9 cut(s)	9, 65, 260, 437, 944, 1467, 1568, 1813, 1967
Alw21I	GWGCWC	3 cut(s)	11, 19, 1469
Alw26I	GTCTC	4 cut(s)	76, 1101, 1924, 2002
AlwI	GGATC	6 cut(s)	742, 929, 1341, 1886, 2162, 2173
Ama87I	CYCGRG	1 cut(s)	1921
Aor13HI	TCCGGA	1 cut(s)	1285
Aor51HI	AGCGCT	1 cut(s)	1146
AoxI	GGCC	4 cut(s)	806, 1752, 1926, 2207
ApeKI	GCWGC	6 cut(s)	1022, 1351, 1502, 1813, 1967, 2219
ApoI	RAATTY	3 cut(s)	264, 780, 1634
AseI	ATTAAT	2 cut(s)	1224, 1551
AspA2I	CCTAGG	1 cut(s)	2012
AspLEI	GCGC	3 cut(s)	1147, 2042, 2044
AspS9I	GGNCC	4 cut(s)	394, 807, 1926, 2147
AsuHPI	GGTGA	7 cut(s)	364, 463, 609, 910, 1034, 1700, 2149
AsuII	TTCGAA	1 cut(s)	1088
AvaI	CYCGRG	1 cut(s)	1921
AvaII	GGWCC	2 cut(s)	394, 2147
AvrII	CCTAGG	1 cut(s)	2012
AxyI	CCTNAGG	2 cut(s)	775, 2143
BanII	GRGCYC	3 cut(s)	11, 89, 1469
Bbv12I	GWGCWC	3 cut(s)	11, 19, 1469
BbvCI	CCTCAGC	1 cut(s)	2082
BbvI	GCAGC	6 cut(s)	1034, 1363, 1514, 1800, 1954, 2206
BccI	CCATC	7 cut(s)	360, 383, 980, 1024, 1148, 1190, 1931
BciT130I	CCWGG	4 cut(s)	168, 507, 2037, 2151
BciVI	GTATCC	1 cut(s)	1194
BclI	TGATCA	1 cut(s)	79
BcoDI	GTCTC	4 cut(s)	76, 1101, 1924, 2002
BcuI	ACTAGT	2 cut(s)	95, 206
BfaI	CTAG	6 cut(s)	96, 174, 207, 1592, 1971, 2013
BfmI	CTRYAG	1 cut(s)	2169
BfoI	RGCGCY	1 cut(s)	1148
BfrI	CTTAAG	2 cut(s)	1426, 1709
BfuI	GTATCC	1 cut(s)	1194
BglII	AGATCT	1 cut(s)	277
BisI	GCNGC	7 cut(s)	1023, 1352, 1503, 1814, 1968, 2207, 2220
BlnI	CCTAGG	1 cut(s)	2012
BlsI	GCNGC	7 cut(s)	1024, 1353, 1504, 1815, 1969, 2208, 2221
Bme1390I	CCNGG	4 cut(s)	168, 507, 2037, 2151
Bme18I	GGWCC	2 cut(s)	394, 2147
BmeT110I	CYCGRG	1 cut(s)	1921
BmgT120I	GGNCC	4 cut(s)	394, 807, 1926, 2147
BmiI	GGNNCC	4 cut(s)	88, 789, 1927, 2088
BmrFI	CCNGG	4 cut(s)	168, 507, 2037, 2151
BmsI	GCATC	4 cut(s)	847, 895, 1531, 1681
BpmI	CTGGAG	2 cut(s)	1198, 1809
Bpu10I	CCTNAGC	1 cut(s)	2082
Bpu14I	TTCGAA	1 cut(s)	1088
BpuEI	CTTGAG	3 cut(s)	374, 577, 1854
Bsa29I	ATCGAT	1 cut(s)	378
BsaI	GGTCTC	2 cut(s)	76, 2002
BsaJI	CCNNGG	5 cut(s)	1191, 1400, 1449, 2012, 2150
BsaWI	WCCGGW	2 cut(s)	619, 1285
BsaXI	ACNNNNNCTCC	1 cut(s)	28
Bsc4I	CCNNNNNNNGG	6 cut(s)	130, 362, 1197, 1330, 1377, 2201
Bse118I	RCCGGY	1 cut(s)	2077
Bse1I	ACTGG	5 cut(s)	219, 364, 1215, 1792, 2096
Bse21I	CCTNAGG	2 cut(s)	775, 2143
Bse3DI	GCAATG	2 cut(s)	1346, 1861
BseAI	TCCGGA	1 cut(s)	1285
BseBI	CCWGG	4 cut(s)	168, 507, 2037, 2151
BseCI	ATCGAT	1 cut(s)	378
BseDI	CCNNGG	5 cut(s)	1191, 1400, 1449, 2012, 2150
BseGI	GGATG	5 cut(s)	223, 371, 862, 1168, 1201
BseLI	CCNNNNNNNGG	6 cut(s)	130, 362, 1197, 1330, 1377, 2201
BseMI	GCAATG	2 cut(s)	1346, 1861
BseMII	CTCAG	5 cut(s)	431, 693, 789, 936, 2073
BseNI	ACTGG	5 cut(s)	219, 364, 1215, 1792, 2096
BsePI	GCGCGC	1 cut(s)	2040
BseRI	GAGGAG	1 cut(s)	2052
BseXI	GCAGC	6 cut(s)	1034, 1363, 1514, 1800, 1954, 2206
BseYI	CCCAGC	2 cut(s)	1371, 1415
Bsh1236I	CGCG	2 cut(s)	144, 2042
BshFI	GGCC	4 cut(s)	808, 1754, 1928, 2209
BshVI	ATCGAT	1 cut(s)	378
BsiHKAI	GWGCWC	3 cut(s)	11, 19, 1469
BsiHKCI	CYCGRG	1 cut(s)	1921
BsiSI	CCGG	3 cut(s)	620, 1286, 2078
BslFI	GGGAC	2 cut(s)	1432, 1892
BslI	CCNNNNNNNGG	6 cut(s)	130, 362, 1197, 1330, 1377, 2201
BsmAI	GTCTC	4 cut(s)	76, 1101, 1924, 2002
BsmFI	GGGAC	2 cut(s)	1432, 1892
BsnI	GGCC	4 cut(s)	808, 1754, 1928, 2209
Bso31I	GGTCTC	2 cut(s)	76, 2002
BsoBI	CYCGRG	1 cut(s)	1921
Bsp119I	TTCGAA	1 cut(s)	1088
Bsp1286I	GDGCHC	4 cut(s)	11, 19, 89, 1469
Bsp13I	TCCGGA	1 cut(s)	1285
Bsp1407I	TGTACA	1 cut(s)	1389
BspACI	CCGC	6 cut(s)	125, 144, 1104, 2033, 2139, 2206
BspANI	GGCC	4 cut(s)	808, 1754, 1928, 2209
BspCNI	CTCAG	5 cut(s)	430, 694, 788, 937, 2074
BspDI	ATCGAT	1 cut(s)	378
BspEI	TCCGGA	1 cut(s)	1285
BspFNI	CGCG	2 cut(s)	144, 2042
BspHI	TCATGA	1 cut(s)	1599
BspLI	GGNNCC	4 cut(s)	88, 789, 1927, 2088
BspPI	GGATC	6 cut(s)	742, 929, 1341, 1886, 2162, 2173
BspT104I	TTCGAA	1 cut(s)	1088
BspTI	CTTAAG	2 cut(s)	1426, 1709
BspTNI	GGTCTC	2 cut(s)	76, 2002
BsrDI	GCAATG	2 cut(s)	1346, 1861
BsrFI	RCCGGY	1 cut(s)	2077
BsrGI	TGTACA	1 cut(s)	1389
BsrI	ACTGG	5 cut(s)	219, 364, 1215, 1792, 2096
BssAI	RCCGGY	1 cut(s)	2077
BssECI	CCNNGG	5 cut(s)	1191, 1400, 1449, 2012, 2150
BssHII	GCGCGC	1 cut(s)	2040
BssT1I	CCWWGG	4 cut(s)	1191, 1400, 1449, 2012
Bst2UI	CCWGG	4 cut(s)	168, 507, 2037, 2151
Bst4CI	ACNGT	9 cut(s)	475, 880, 929, 982, 1246, 1848, 1900, 2053, 2173
Bst6I	CTCTTC	2 cut(s)	48, 2070
BstAFI	CTTAAG	2 cut(s)	1426, 1709
BstAUI	TGTACA	1 cut(s)	1389
BstBI	TTCGAA	1 cut(s)	1088
BstC8I	GCNNGC	5 cut(s)	142, 1102, 1818, 2042, 2224
BstDEI	CTNAG	8 cut(s)	417, 702, 775, 945, 1046, 2082, 2143, 2211
BstF5I	GGATG	5 cut(s)	223, 371, 862, 1168, 1201
BstFNI	CGCG	2 cut(s)	144, 2042
BstH2I	RGCGCY	1 cut(s)	1148
BstHHI	GCGC	3 cut(s)	1147, 2042, 2044
BstMAI	GTCTC	4 cut(s)	76, 1101, 1924, 2002
BstMWI	GCNNNNNNNGC	5 cut(s)	866, 1072, 2032, 2041, 2131
BstNI	CCWGG	4 cut(s)	168, 507, 2037, 2151
BstNSI	RCATGY	2 cut(s)	1820, 2226
BstSCI	CCNGG	4 cut(s)	166, 505, 2035, 2149
BstSFI	CTRYAG	1 cut(s)	2169
BstUI	CGCG	2 cut(s)	144, 2042
BstV1I	GCAGC	6 cut(s)	1034, 1363, 1514, 1800, 1954, 2206
BstX2I	RGATCY	3 cut(s)	277, 734, 2165
BstXI	CCANNNNNNTGG	2 cut(s)	513, 1738
BstYI	RGATCY	3 cut(s)	277, 734, 2165
Bsu15I	ATCGAT	1 cut(s)	378
Bsu36I	CCTNAGG	2 cut(s)	775, 2143
BsuI	GTATCC	1 cut(s)	1194
BsuRI	GGCC	4 cut(s)	808, 1754, 1928, 2209
BsuTUI	ATCGAT	1 cut(s)	378
BtgZI	GCGATG	1 cut(s)	249
BtsCI	GGATG	5 cut(s)	223, 371, 862, 1168, 1201
BtsIMutI	CAGTG	5 cut(s)	107, 978, 1068, 1785, 2103
Cac8I	GCNNGC	5 cut(s)	142, 1102, 1818, 2042, 2224
CciI	TCATGA	1 cut(s)	1599
CfoI	GCGC	3 cut(s)	1147, 2042, 2044
Cfr10I	RCCGGY	1 cut(s)	2077
Cfr13I	GGNCC	4 cut(s)	394, 807, 1926, 2147
ClaI	ATCGAT	1 cut(s)	378
CseI	GACGC	1 cut(s)	191
CsiI	ACCWGGT	1 cut(s)	166
Csp6I	GTAC	8 cut(s)	212, 460, 949, 1122, 1166, 1381, 1390, 2017
CspCI	CAANNNNNGTGG	2 cut(s)	1228, 1263
CviAII	CATG	7 cut(s)	562, 1329, 1600, 1817, 1875, 2020, 2223
CviQI	GTAC	8 cut(s)	212, 460, 949, 1122, 1166, 1381, 1390, 2017
DdeI	CTNAG	8 cut(s)	417, 702, 775, 945, 1046, 2082, 2143, 2211
Eam1104I	CTCTTC	2 cut(s)	48, 2070
EarI	CTCTTC	2 cut(s)	48, 2070
EciI	GGCGGA	2 cut(s)	2022, 2128
Ecl136II	GAGCTC	2 cut(s)	9, 1467
Eco130I	CCWWGG	4 cut(s)	1191, 1400, 1449, 2012
Eco147I	AGGCCT	1 cut(s)	1754
Eco24I	GRGCYC	3 cut(s)	11, 89, 1469
Eco31I	GGTCTC	2 cut(s)	76, 2002
Eco32I	GATATC	1 cut(s)	310
Eco47I	GGWCC	2 cut(s)	394, 2147
Eco47III	AGCGCT	1 cut(s)	1146
Eco53kI	GAGCTC	2 cut(s)	9, 1467
Eco57I	CTGAAG	1 cut(s)	1044
Eco81I	CCTNAGG	2 cut(s)	775, 2143
Eco88I	CYCGRG	1 cut(s)	1921
EcoICRI	GAGCTC	2 cut(s)	9, 1467
EcoO109I	RGGNCCY	1 cut(s)	394
EcoRI	GAATTC	1 cut(s)	780
EcoRII	CCWGG	4 cut(s)	166, 505, 2035, 2149
EcoRV	GATATC	1 cut(s)	310
EcoT14I	CCWWGG	4 cut(s)	1191, 1400, 1449, 2012
EcoT22I	ATGCAT	1 cut(s)	1822
EcoT38I	GRGCYC	3 cut(s)	11, 89, 1469
ErhI	CCWWGG	4 cut(s)	1191, 1400, 1449, 2012
FaeI	CATG	7 cut(s)	565, 1332, 1603, 1820, 1878, 2023, 2226
FalI	AAGNNNNNCTT	2 cut(s)	665, 697
FaqI	GGGAC	2 cut(s)	1432, 1892
FatI	CATG	7 cut(s)	561, 1328, 1599, 1816, 1874, 2019, 2222
FauI	CCCGC	2 cut(s)	132, 137
FauNDI	CATATG	1 cut(s)	803
FbaI	TGATCA	1 cut(s)	79
Fnu4HI	GCNGC	7 cut(s)	1023, 1352, 1503, 1814, 1968, 2207, 2220
FokI	GGATG	5 cut(s)	230, 378, 869, 1175, 1208
FriOI	GRGCYC	3 cut(s)	11, 89, 1469
Fsp4HI	GCNGC	7 cut(s)	1023, 1352, 1503, 1814, 1968, 2207, 2220
FspBI	CTAG	6 cut(s)	96, 174, 207, 1592, 1971, 2013
GlaI	GCGC	3 cut(s)	1146, 2041, 2043
GluI	GCNGC	7 cut(s)	1023, 1352, 1503, 1814, 1968, 2207, 2220
GsaI	CCCAGC	2 cut(s)	1375, 1419
GsuI	CTGGAG	2 cut(s)	1198, 1809
HaeII	RGCGCY	1 cut(s)	1148
HaeIII	GGCC	4 cut(s)	808, 1754, 1928, 2209
HapII	CCGG	3 cut(s)	620, 1286, 2078
HgaI	GACGC	1 cut(s)	191
HhaI	GCGC	3 cut(s)	1147, 2042, 2044
Hin1II	CATG	7 cut(s)	565, 1332, 1603, 1820, 1878, 2023, 2226
Hin6I	GCGC	3 cut(s)	1145, 2040, 2042
HinP1I	GCGC	3 cut(s)	1145, 2040, 2042
HincII	GTYRAC	2 cut(s)	346, 2049
HindII	GTYRAC	2 cut(s)	346, 2049
HinfI	GANTC	5 cut(s)	651, 748, 1291, 1396, 1603
HpaI	GTTAAC	2 cut(s)	346, 2049
HpaII	CCGG	3 cut(s)	620, 1286, 2078
HphI	GGTGA	7 cut(s)	364, 463, 609, 910, 1034, 1700, 2149
Hpy166II	GTNNAC	9 cut(s)	195, 204, 212, 346, 372, 1611, 1658, 1666, 2049
Hpy188I	TCNGA	8 cut(s)	181, 892, 1000, 1266, 1338, 1438, 1584, 1891
Hpy8I	GTNNAC	9 cut(s)	195, 204, 212, 346, 372, 1611, 1658, 1666, 2049
HpyAV	CCTTC	5 cut(s)	248, 319, 723, 1772, 2145
HpyCH4III	ACNGT	9 cut(s)	475, 880, 929, 982, 1246, 1848, 1900, 2053, 2173
HpyCH4IV	ACGT	1 cut(s)	1932
HpyCH4V	TGCA	8 cut(s)	908, 1066, 1351, 1502, 1544, 1816, 1820, 2222
HpyF10VI	GCNNNNNNNGC	5 cut(s)	866, 1072, 2032, 2041, 2131
HpyF3I	CTNAG	8 cut(s)	417, 702, 775, 945, 1046, 2082, 2143, 2211
HpySE526I	ACGT	1 cut(s)	1932
Hsp92II	CATG	7 cut(s)	565, 1332, 1603, 1820, 1878, 2023, 2226
HspAI	GCGC	3 cut(s)	1145, 2040, 2042
Kpn2I	TCCGGA	1 cut(s)	1285
Ksp22I	TGATCA	1 cut(s)	79
KspAI	GTTAAC	2 cut(s)	346, 2049
LmnI	GCTCC	7 cut(s)	6, 92, 257, 1097, 1217, 1464, 2092
Lsp1109I	GCAGC	6 cut(s)	1034, 1363, 1514, 1800, 1954, 2206
LweI	GCATC	4 cut(s)	847, 895, 1531, 1681
MabI	ACCWGGT	1 cut(s)	166
MaeI	CTAG	6 cut(s)	96, 174, 207, 1592, 1971, 2013
MaeII	ACGT	1 cut(s)	1932
MaeIII	GTNAC	4 cut(s)	811, 1534, 1792, 1804
MfeI	CAATTG	1 cut(s)	2069
MflI	RGATCY	3 cut(s)	277, 734, 2165
MhlI	GDGCHC	4 cut(s)	11, 19, 89, 1469
MlyI	GAGTC	1 cut(s)	660
MmeI	TCCRAC	2 cut(s)	265, 1919
MnlI	CCTC	7 cut(s)	616, 784, 1371, 1765, 2073, 2077, 2205
Mph1103I	ATGCAT	1 cut(s)	1822
MroI	TCCGGA	1 cut(s)	1285
MslI	CAYNNNNRTG	1 cut(s)	1274
MspA1I	CMGCKG	1 cut(s)	1967
MspCI	CTTAAG	2 cut(s)	1426, 1709
MspI	CCGG	3 cut(s)	620, 1286, 2078
MspR9I	CCNGG	4 cut(s)	168, 507, 2037, 2151
MunI	CAATTG	1 cut(s)	2069
MvaI	CCWGG	4 cut(s)	168, 507, 2037, 2151
MvnI	CGCG	2 cut(s)	144, 2042
MwoI	GCNNNNNNNGC	5 cut(s)	866, 1072, 2032, 2041, 2131
NdeI	CATATG	1 cut(s)	803
NlaIII	CATG	7 cut(s)	565, 1332, 1603, 1820, 1878, 2023, 2226
NlaIV	GGNNCC	4 cut(s)	88, 789, 1927, 2088
NmuCI	GTSAC	2 cut(s)	811, 1804
NsiI	ATGCAT	1 cut(s)	1822
NspI	RCATGY	2 cut(s)	1820, 2226
NspV	TTCGAA	1 cut(s)	1088
PaeI	GCATGC	2 cut(s)	1820, 2226
PagI	TCATGA	1 cut(s)	1599
PauI	GCGCGC	1 cut(s)	2040
PceI	AGGCCT	1 cut(s)	1754
PfeI	GAWTC	4 cut(s)	748, 1291, 1396, 1603
PkrI	GCNGC	7 cut(s)	1024, 1353, 1504, 1815, 1969, 2208, 2221
PleI	GAGTC	1 cut(s)	659
PpsI	GAGTC	1 cut(s)	659
PpuMI	RGGWCCY	1 cut(s)	394
PshBI	ATTAAT	2 cut(s)	1224, 1551
PsiI	TTATAA	1 cut(s)	2001
Psp124BI	GAGCTC	2 cut(s)	11, 1469
Psp1406I	AACGTT	1 cut(s)	1932
Psp5II	RGGWCCY	1 cut(s)	394
Psp6I	CCWGG	4 cut(s)	166, 505, 2035, 2149
PspFI	CCCAGC	2 cut(s)	1371, 1415
PspGI	CCWGG	4 cut(s)	166, 505, 2035, 2149
PspN4I	GGNNCC	4 cut(s)	88, 789, 1927, 2088
PspPI	GGNCC	4 cut(s)	394, 807, 1926, 2147
PspPPI	RGGWCCY	1 cut(s)	394
PsuI	RGATCY	3 cut(s)	277, 734, 2165
PteI	GCGCGC	1 cut(s)	2040
PvuII	CAGCTG	1 cut(s)	1967
RsaI	GTAC	8 cut(s)	213, 461, 950, 1123, 1167, 1382, 1391, 2018
RsaNI	GTAC	8 cut(s)	212, 460, 949, 1122, 1166, 1381, 1390, 2017
RseI	CAYNNNNRTG	1 cut(s)	1274
SacI	GAGCTC	2 cut(s)	11, 1469
SatI	GCNGC	7 cut(s)	1023, 1352, 1503, 1814, 1968, 2207, 2220
Sau96I	GGNCC	4 cut(s)	394, 807, 1926, 2147
SchI	GAGTC	1 cut(s)	660
ScrFI	CCNGG	4 cut(s)	168, 507, 2037, 2151
SduI	GDGCHC	4 cut(s)	11, 19, 89, 1469
SexAI	ACCWGGT	1 cut(s)	166
SfaNI	GCATC	4 cut(s)	847, 895, 1531, 1681
SfcI	CTRYAG	1 cut(s)	2169
SfuI	TTCGAA	1 cut(s)	1088
SinI	GGWCC	2 cut(s)	394, 2147
SmiMI	CAYNNNNRTG	1 cut(s)	1274
SmlI	CTYRAG	5 cut(s)	389, 556, 1426, 1709, 1869
SmoI	CTYRAG	5 cut(s)	389, 556, 1426, 1709, 1869
SpeI	ACTAGT	2 cut(s)	95, 206
SphI	GCATGC	2 cut(s)	1820, 2226
SseBI	AGGCCT	1 cut(s)	1754
SsiI	CCGC	6 cut(s)	125, 144, 1104, 2033, 2139, 2206
SspI	AATATT	1 cut(s)	523
SspMI	CTAG	6 cut(s)	96, 174, 207, 1592, 1971, 2013
SstI	GAGCTC	2 cut(s)	11, 1469
StuI	AGGCCT	1 cut(s)	1754
StyD4I	CCNGG	4 cut(s)	166, 505, 2035, 2149
StyI	CCWWGG	4 cut(s)	1191, 1400, 1449, 2012
TaaI	ACNGT	9 cut(s)	475, 880, 929, 982, 1246, 1848, 1900, 2053, 2173
TaiI	ACGT	1 cut(s)	1935
TaqI	TCGA	5 cut(s)	378, 433, 1088, 1170, 2121
TatI	WGTACW	4 cut(s)	211, 1121, 1165, 1389
TauI	GCSGC	1 cut(s)	2209
TfiI	GAWTC	4 cut(s)	748, 1291, 1396, 1603
TscAI	CASTG	5 cut(s)	107, 985, 1068, 1792, 2103
TseFI	GTSAC	2 cut(s)	811, 1804
TseI	GCWGC	6 cut(s)	1022, 1351, 1502, 1813, 1967, 2219
Tsp45I	GTSAC	2 cut(s)	811, 1804
TspDTI	ATGAA	7 cut(s)	748, 949, 1154, 1223, 1646, 1902, 2036
TspGWI	ACGGA	1 cut(s)	363
TspRI	CASTG	5 cut(s)	107, 985, 1068, 1792, 2103
Vha464I	CTTAAG	2 cut(s)	1426, 1709
VpaK11BI	GGWCC	2 cut(s)	394, 2147
VspI	ATTAAT	2 cut(s)	1224, 1551
XapI	RAATTY	3 cut(s)	264, 780, 1634
XceI	RCATGY	2 cut(s)	1820, 2226
XcmI	CCANNNNNNNNNTGG	1 cut(s)	211
XmaJI	CCTAGG	1 cut(s)	2012
XspI	CTAG	6 cut(s)	96, 174, 207, 1592, 1971, 2013
Zsp2I	ATGCAT	1 cut(s)	1822

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.