Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0002327

Physical Location & Seq

Genomic Coordinates Reverse (-)

61554262 .. 61560719

Gene Structure 6458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG392900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGCCTTTGCAGAAAAATATATTCTTCACGCAACACAACTTGAGTATGAGAAACTATGTGCTTTCTGTATCAAAGAAAGTGGTTGTCAATTTTATCTCATCACCAGAGGTGGATTTCCTGAACAGTATTAAAGAACGTGTTAGTCCAAGCGCAACAAAGTTGATCTTTAAGTTTCTTGATGAAGCTGAGATTGAACCTTCGACAAACCAGACTTATGGTTCTCTATTGAAGAATCTCACATTTATCACGACATTTGCCGCTGGAATTATAGTTCCAAAAACTTACATATGGCCTGTCACTGTGGACAATTATTTAGAACCTCACACTACCATTGTTTCGGATGCTCATAAAGCAGGGCTCACAGTATTTGTGTCAGGTTTGTATAATGACGTGCCATTCCCCTTCAATTACAGTTATGATCCAGTTTCTGAGTACCTGTCATTCTTTGACAACGGGGATTTCAGTGTTGACGGTGTGCTGTCTGACTTTCCCATAACTCCATCAGCGGCCATAGATTGTTATGCTCACCCAGAAACGAATGCTTCAGTACAAGATACACCTTTGGTTATCTCGAAAGACGGAGATAGTGGGGACTACCCTGGCTGTACTGACTTGGCGTATAAGCATGCAATTGCAGATGGTGTAGATGTACTCGATTGTAACGTCCAAATGTCCAAGGACGGGATACCATTTTGCTCGAGCTCAATAAATCTTATTGATAGCACAACAGTTGCTCAAACAAGCTTTAGCAGCTACACAATGGTTGTTCCTGAAATTAAGGTTGGCAGTGGAATATATACGTTTAGCCTGACATGGGATCAGATCAAAACACTACAACCAACTATATCAAACCCGGCGAAAAATTTCAAGTTGTTCAGGAATCCAAGATTCAAGAATGCTGGCACTTACTTGAAACTATCTGAATTTTTGACCTTGGCAAAGAATTCGAGTTCTCTAATTGGTGTCTTAATTGGCATAGAGTATGCGGCGTATCTTGTAGAGAAGAAGGGACTAAGTGTAACAGATGCAGTCATGACTGAGTTGGACAAAGCTGGTTTTGGTAATCAGATAGCTCTAGATGTCATGATTCAGTCCAGCAATAGTTCTGTTCTGATGAAATTTAAGGAGAAAAACAAGTATAAACTTGTTTACAAGATTGACGAGGACATTGGTGATGCCCCTGATAAAACTGTTCAGGACATCAAGAAGTTTGCCGATGCTGTGGTCATCAACAAGGTCTCTGTCTTTCCAGACAATCAGTTATTCGTCAATGGAGCAACCAATGTTGTAAAGAAGTTTCATGGATTTAAACTACCTGTTTATGTTGAACTCTTCAGCAATGAGTTTGTATCTCAAGCATGGGACTTCTTCTCAGATCCATCCGTGGAGATCAATTCATTTGTGACGGGGGCCGCAGTTGATGGTGTTATCACAGACTTCCCCAAAACAGCTGCTAGATACAAAAGAAACCGGTGTTTAAGTTATAAAGAGACACCTTCCTACATGAGCCCTGTTGAGCCAGGCAGTCTGTTACAAGTTGTTTCTCCTGGTTACTTGCCACCTGCTGAGGCCCCAAATCCAGCCCTGACAGAGAGTGATGTGGTTGAGCCGCCTTTGCCGTCCGCCGAAACGGCCTTTGCTCCTGGGCCAGCTGGTGGATCTACAGTACCGCCACCACGGCCGAATGGGCAGCCTAAGACTGCTGCGTGCTTCTTTCTCTCAACTCTGGCTATGCTAGTTGCCGCTCTTTTTCTTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006968 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008889 GO:0009505 GO:0009506 GO:0009653 GO:0009664 GO:0009791 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010016 GO:0010026 GO:0010052 GO:0010053 GO:0010054 GO:0010103 GO:0010374 GO:0010383 GO:0010441 GO:0010442 GO:0016020 GO:0016043 GO:0016049 GO:0016787 GO:0016788 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030243 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0046872 GO:0048364 GO:0048367 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0052541 GO:0055044 GO:0060560 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

GDPD

Protein Analysis

586

Amino Acids

64.02

Weight (kDa)

5.03

Isoelectric Point (pI)

35.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDPD	PF03009	194 - 483	9.2e-24	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66970 AT1G66970 AT1G66970 AT4G26690
fragaria_vesca	FvH4_3g13670 FvH4_3g13670 FvH4_3g13670 FvH4_3g30290 FvH4_3g30290
malus_domestica	MD03G1190400.v1.1 MD11G1207100.v1.1
prunus_persica	Prupe.4G228400_v2.0.a1 Prupe.4G228400_v2.0.a1
pyrus_communis	pycom03g14330 pycom03g14370 pycom11g18010
rosa_chinensis	RchiOBHm_Chr5g0022921 RchiOBHm_Chr5g0056171
rosa_laevigata	RLG00000032682 RLG00000035057 RLG00000035060
rosa_multiflora	Rmu_sc0000680.1_g000027 Rmu_sc0001787.1_g000024 Rmu_sc0002675.1_g000001
rosa_roxburghii	Rroxscaffold_1G00024130 Rroxscaffold_1G00056420
rosa_rugosa	Rorug05G0075500 Rorug05G0297800 Rorug05G0297800
rosa_samantha	Rh5AG162000 Rh5AG368900 Rh5BG161200 Rh5BG379900 Rh5CG175800 Rh5CG402700 Rh5DG162500 Rh5DG392700 Rh5DG392900
rosa_wichuraiana	Rw0G004450 Rw0G012690 Rw5G014580 Rw5G034630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1485
AarI	CACCTGC	1 cut(s)	1570
Acc36I	ACCTGC	1 cut(s)	1570
AccB7I	CCANNNNNTGG	1 cut(s)	1655
AccBSI	CCGCTC	1 cut(s)	1745
AciI	CCGC	8 cut(s)	258, 506, 986, 1413, 1610, 1623, 1670, 1743
AclWI	GGATC	4 cut(s)	413, 825, 1370, 1666
AcoI	YGGCCR	2 cut(s)	507, 1679
AcsI	RAATTY	4 cut(s)	862, 923, 943, 1118
AcuI	CTGAAG	2 cut(s)	528, 1318
AfaI	GTAC	5 cut(s)	434, 549, 607, 651, 1668
AfiI	CCNNNNNNNGG	3 cut(s)	681, 814, 1655
AflIII	ACRYGT	1 cut(s)	136
AgeI	ACCGGT	1 cut(s)	1470
AgsI	TTSAA	7 cut(s)	194, 229, 406, 868, 892, 913, 1328
AjiI	CACGTC	1 cut(s)	391
AjnI	CCWGG	4 cut(s)	598, 1519, 1546, 1642
AjuI	GAANNNNNNNTTGG	2 cut(s)	765, 797
AloI	GAACNNNNNNTCC	2 cut(s)	255, 287
AluBI	AGCT	8 cut(s)	185, 702, 744, 753, 1052, 1073, 1451, 1652
AluI	AGCT	8 cut(s)	185, 702, 744, 753, 1052, 1073, 1451, 1652
Alw21I	GWGCWC	1 cut(s)	704
Alw26I	GTCTC	2 cut(s)	1243, 1484
AlwI	GGATC	4 cut(s)	413, 825, 1370, 1666
AlwNI	CAGNNNCTG	1 cut(s)	428
Ama87I	CYCGRG	1 cut(s)	697
AoxI	GGCC	7 cut(s)	290, 507, 1410, 1569, 1632, 1646, 1679
ApeKI	GCWGC	4 cut(s)	750, 1451, 1690, 1703
ApoI	RAATTY	4 cut(s)	862, 923, 943, 1118
AsiGI	ACCGGT	1 cut(s)	1470
Asp700I	GAANNNNTTC	1 cut(s)	863
AspLEI	GCGC	1 cut(s)	152
AspS9I	GGNCC	3 cut(s)	1410, 1570, 1646
AsuC2I	CCSGG	1 cut(s)	854
AsuHPI	GGTGA	3 cut(s)	93, 518, 1184
AvaI	CYCGRG	1 cut(s)	697
BanII	GRGCYC	3 cut(s)	360, 704, 1511
Bbv12I	GWGCWC	1 cut(s)	704
BbvCI	CCTCAGC	1 cut(s)	1566
BbvI	GCAGC	4 cut(s)	762, 1438, 1690, 1702
BccI	CCATC	4 cut(s)	508, 632, 1387, 1415
BceAI	ACGGC	3 cut(s)	1603, 1647, 1694
BcgI	CGANNNNNNTGC	2 cut(s)	927, 961
BciT130I	CCWGG	4 cut(s)	600, 1521, 1548, 1644
BciVI	GTATCC	1 cut(s)	678
BcnI	CCSGG	1 cut(s)	854
BcoDI	GTCTC	2 cut(s)	1243, 1484
BfaI	CTAG	3 cut(s)	1076, 1455, 1736
BfmI	CTRYAG	1 cut(s)	1662
BfuAI	ACCTGC	1 cut(s)	1570
BfuI	GTATCC	1 cut(s)	678
BglI	GCCNNNNNGGC	3 cut(s)	1631, 1678, 1687
Bme1390I	CCNGG	5 cut(s)	600, 854, 1521, 1548, 1644
BmeT110I	CYCGRG	1 cut(s)	697
BmgBI	CACGTC	1 cut(s)	391
BmgT120I	GGNCC	3 cut(s)	1410, 1570, 1646
BmiI	GGNNCC	2 cut(s)	1411, 1572
BmrFI	CCNGG	5 cut(s)	600, 854, 1521, 1548, 1644
BmsI	GCATC	4 cut(s)	331, 1015, 1165, 1207
Bpu10I	CCTNAGC	1 cut(s)	1566
BpuEI	CTTGAG	2 cut(s)	61, 1338
BpuMI	CCSGG	1 cut(s)	854
BsaI	GGTCTC	1 cut(s)	1243
BsaJI	CCNNGG	6 cut(s)	598, 675, 933, 1383, 1643, 1676
BsaWI	WCCGGW	1 cut(s)	1470
Bsc4I	CCNNNNNNNGG	3 cut(s)	681, 814, 1655
Bse118I	RCCGGY	1 cut(s)	1470
Bse1I	ACTGG	1 cut(s)	422
Bse3DI	GCAATG	1 cut(s)	1345
BseBI	CCWGG	4 cut(s)	600, 1521, 1548, 1644
BseDI	CCNNGG	6 cut(s)	598, 675, 933, 1383, 1643, 1676
BseGI	GGATG	2 cut(s)	346, 1379
BseLI	CCNNNNNNNGG	3 cut(s)	681, 814, 1655
BseMI	GCAATG	1 cut(s)	1345
BseMII	CTCAG	5 cut(s)	177, 420, 1029, 1386, 1557
BseNI	ACTGG	1 cut(s)	422
BseX3I	CGGCCG	1 cut(s)	1679
BseXI	GCAGC	4 cut(s)	762, 1438, 1690, 1702
Bsh1285I	CGRYCG	1 cut(s)	1682
BshFI	GGCC	7 cut(s)	292, 509, 1412, 1571, 1634, 1648, 1681
BshTI	ACCGGT	1 cut(s)	1470
BsiEI	CGRYCG	1 cut(s)	1682
BsiHKAI	GWGCWC	1 cut(s)	704
BsiHKCI	CYCGRG	1 cut(s)	697
BsiSI	CCGG	2 cut(s)	854, 1471
BslFI	GGGAC	3 cut(s)	605, 1023, 1376
BslI	CCNNNNNNNGG	3 cut(s)	681, 814, 1655
BsmAI	GTCTC	2 cut(s)	1243, 1484
BsmFI	GGGAC	3 cut(s)	605, 1023, 1376
BsmI	GAATGC	2 cut(s)	544, 901
BsnI	GGCC	7 cut(s)	292, 509, 1412, 1571, 1634, 1648, 1681
Bso31I	GGTCTC	1 cut(s)	1243
BsoBI	CYCGRG	1 cut(s)	697
Bsp1286I	GDGCHC	3 cut(s)	360, 704, 1511
Bsp143I	GATC	7 cut(s)	162, 418, 817, 822, 1375, 1389, 1658
BspACI	CCGC	8 cut(s)	258, 506, 986, 1413, 1610, 1623, 1670, 1743
BspANI	GGCC	7 cut(s)	292, 509, 1412, 1571, 1634, 1648, 1681
BspCNI	CTCAG	5 cut(s)	178, 421, 1030, 1385, 1558
BspHI	TCATGA	2 cut(s)	1032, 1083
BspLI	GGNNCC	2 cut(s)	1411, 1572
BspMI	ACCTGC	1 cut(s)	1570
BspPI	GGATC	4 cut(s)	413, 825, 1370, 1666
BspTNI	GGTCTC	1 cut(s)	1243
BsrBI	CCGCTC	1 cut(s)	1745
BsrDI	GCAATG	1 cut(s)	1345
BsrFI	RCCGGY	1 cut(s)	1470
BsrI	ACTGG	1 cut(s)	422
BssAI	RCCGGY	1 cut(s)	1470
BssECI	CCNNGG	6 cut(s)	598, 675, 933, 1383, 1643, 1676
BssMI	GATC	7 cut(s)	162, 418, 817, 822, 1375, 1389, 1658
BssT1I	CCWWGG	2 cut(s)	675, 933
Bst2UI	CCWGG	4 cut(s)	600, 1521, 1548, 1644
Bst4CI	ACNGT	8 cut(s)	125, 301, 364, 413, 473, 730, 1192, 1666
Bst6I	CTCTTC	1 cut(s)	1337
BstC8I	GCNNGC	4 cut(s)	627, 901, 1650, 1708
BstDEI	CTNAG	7 cut(s)	186, 429, 1013, 1038, 1372, 1566, 1695
BstDSI	CCRYGG	2 cut(s)	1383, 1676
BstF5I	GGATG	2 cut(s)	346, 1379
BstHHI	GCGC	1 cut(s)	152
BstKTI	GATC	7 cut(s)	165, 421, 820, 825, 1378, 1392, 1661
BstMAI	GTCTC	2 cut(s)	1243, 1484
BstMBI	GATC	7 cut(s)	162, 418, 817, 822, 1375, 1389, 1658
BstMCI	CGRYCG	1 cut(s)	1682
BstMWI	GCNNNNNNNGC	6 cut(s)	350, 750, 1615, 1631, 1678, 1687
BstNI	CCWGG	4 cut(s)	600, 1521, 1548, 1644
BstNSI	RCATGY	1 cut(s)	629
BstSCI	CCNGG	5 cut(s)	598, 852, 1519, 1546, 1642
BstSFI	CTRYAG	1 cut(s)	1662
BstV1I	GCAGC	4 cut(s)	762, 1438, 1690, 1702
BstX2I	RGATCY	2 cut(s)	1375, 1658
BstXI	CCANNNNNNTGG	1 cut(s)	215
BstYI	RGATCY	2 cut(s)	1375, 1658
BstZI	CGGCCG	1 cut(s)	1679
BsuI	GTATCC	1 cut(s)	678
BsuRI	GGCC	7 cut(s)	292, 509, 1412, 1571, 1634, 1648, 1681
BtgI	CCRYGG	2 cut(s)	1383, 1676
BtrI	CACGTC	1 cut(s)	391
BtsCI	GGATG	2 cut(s)	346, 1379
BtsI	GCAGTG	1 cut(s)	793
BtsIMutI	CAGTG	3 cut(s)	297, 469, 793
BveI	ACCTGC	1 cut(s)	1570
Cac8I	GCNNGC	4 cut(s)	627, 901, 1650, 1708
CaiI	CAGNNNCTG	1 cut(s)	428
CciI	TCATGA	2 cut(s)	1032, 1083
CfoI	GCGC	1 cut(s)	152
Cfr10I	RCCGGY	1 cut(s)	1470
Cfr13I	GGNCC	3 cut(s)	1410, 1570, 1646
Csp6I	GTAC	5 cut(s)	433, 548, 606, 650, 1667
CspAI	ACCGGT	1 cut(s)	1470
CspCI	CAANNNNNGTGG	2 cut(s)	60, 95
CviAII	CATG	7 cut(s)	626, 813, 1033, 1084, 1301, 1359, 1504
CviQI	GTAC	5 cut(s)	433, 548, 606, 650, 1667
DdeI	CTNAG	7 cut(s)	186, 429, 1013, 1038, 1372, 1566, 1695
DpnI	GATC	7 cut(s)	164, 420, 819, 824, 1377, 1391, 1660
DpnII	GATC	7 cut(s)	162, 418, 817, 822, 1375, 1389, 1658
DraI	TTTAAA	1 cut(s)	1309
EaeI	YGGCCR	2 cut(s)	507, 1679
EagI	CGGCCG	1 cut(s)	1679
Eam1104I	CTCTTC	1 cut(s)	1337
EarI	CTCTTC	1 cut(s)	1337
EciI	GGCGGA	1 cut(s)	1612
Ecl136II	GAGCTC	1 cut(s)	702
EclXI	CGGCCG	1 cut(s)	1679
Eco130I	CCWWGG	2 cut(s)	675, 933
Eco24I	GRGCYC	3 cut(s)	360, 704, 1511
Eco31I	GGTCTC	1 cut(s)	1243
Eco52I	CGGCCG	1 cut(s)	1679
Eco53kI	GAGCTC	1 cut(s)	702
Eco57I	CTGAAG	2 cut(s)	528, 1318
Eco88I	CYCGRG	1 cut(s)	697
EcoICRI	GAGCTC	1 cut(s)	702
EcoO109I	RGGNCCY	1 cut(s)	1570
EcoRI	GAATTC	1 cut(s)	943
EcoRII	CCWGG	4 cut(s)	598, 1519, 1546, 1642
EcoT14I	CCWWGG	2 cut(s)	675, 933
EcoT38I	GRGCYC	3 cut(s)	360, 704, 1511
ErhI	CCWWGG	2 cut(s)	675, 933
FaeI	CATG	7 cut(s)	629, 816, 1036, 1087, 1304, 1362, 1507
FalI	AAGNNNNNCTT	2 cut(s)	149, 181
FaqI	GGGAC	3 cut(s)	605, 1023, 1376
FatI	CATG	7 cut(s)	625, 812, 1032, 1083, 1300, 1358, 1503
FauNDI	CATATG	1 cut(s)	287
FokI	GGATG	2 cut(s)	353, 1366
FriOI	GRGCYC	3 cut(s)	360, 704, 1511
FspBI	CTAG	3 cut(s)	1076, 1455, 1736
GlaI	GCGC	1 cut(s)	151
HaeIII	GGCC	7 cut(s)	292, 509, 1412, 1571, 1634, 1648, 1681
HapII	CCGG	2 cut(s)	854, 1471
HhaI	GCGC	1 cut(s)	152
Hin1II	CATG	7 cut(s)	629, 816, 1036, 1087, 1304, 1362, 1507
Hin6I	GCGC	1 cut(s)	150
HinP1I	GCGC	1 cut(s)	150
HincII	GTYRAC	1 cut(s)	469
HindII	GTYRAC	1 cut(s)	469
HindIII	AAGCTT	1 cut(s)	742
HinfI	GANTC	4 cut(s)	232, 880, 888, 1087
HpaII	CCGG	2 cut(s)	854, 1471
HphI	GGTGA	3 cut(s)	93, 518, 1184
Hpy166II	GTNNAC	3 cut(s)	304, 469, 1150
Hpy188I	TCNGA	9 cut(s)	340, 430, 484, 822, 922, 1068, 1113, 1375, 1760
Hpy8I	GTNNAC	3 cut(s)	304, 469, 1150
HpyAV	CCTTC	4 cut(s)	207, 412, 1000, 1506
HpyCH4III	ACNGT	8 cut(s)	125, 301, 364, 413, 473, 730, 1192, 1666
HpyCH4IV	ACGT	4 cut(s)	136, 390, 663, 800
HpyCH4V	TGCA	4 cut(s)	10, 629, 635, 1028
HpyF10VI	GCNNNNNNNGC	6 cut(s)	350, 750, 1615, 1631, 1678, 1687
HpyF3I	CTNAG	7 cut(s)	186, 429, 1013, 1038, 1372, 1566, 1695
HpySE526I	ACGT	4 cut(s)	136, 390, 663, 800
Hsp92II	CATG	7 cut(s)	629, 816, 1036, 1087, 1304, 1362, 1507
HspAI	GCGC	1 cut(s)	150
Kzo9I	GATC	7 cut(s)	162, 418, 817, 822, 1375, 1389, 1658
LmnI	GCTCC	2 cut(s)	1274, 1645
Lsp1109I	GCAGC	4 cut(s)	762, 1438, 1690, 1702
LweI	GCATC	4 cut(s)	331, 1015, 1165, 1207
MaeI	CTAG	3 cut(s)	1076, 1455, 1736
MaeII	ACGT	4 cut(s)	136, 390, 663, 800
MaeIII	GTNAC	6 cut(s)	295, 659, 1018, 1402, 1530, 1550
MalI	GATC	7 cut(s)	164, 420, 819, 824, 1377, 1391, 1660
MbiI	CCGCTC	1 cut(s)	1745
MboI	GATC	7 cut(s)	162, 418, 817, 822, 1375, 1389, 1658
MboII	GAAGA	5 cut(s)	16, 241, 1015, 1324, 1360
MfeI	CAATTG	1 cut(s)	630
MflI	RGATCY	2 cut(s)	1375, 1658
MhlI	GDGCHC	3 cut(s)	360, 704, 1511
MmeI	TCCRAC	1 cut(s)	1023
MnlI	CCTC	4 cut(s)	100, 330, 1156, 1561
MroXI	GAANNNNTTC	1 cut(s)	863
MseI	TTAA	7 cut(s)	129, 168, 777, 968, 1122, 1308, 1478
MspA1I	CMGCKG	4 cut(s)	260, 506, 1451, 1652
MspI	CCGG	2 cut(s)	854, 1471
MspR9I	CCNGG	5 cut(s)	600, 854, 1521, 1548, 1644
MunI	CAATTG	1 cut(s)	630
Mva1269I	GAATGC	2 cut(s)	544, 901
MvaI	CCWGG	4 cut(s)	600, 1521, 1548, 1644
MwoI	GCNNNNNNNGC	6 cut(s)	350, 750, 1615, 1631, 1678, 1687
NciI	CCSGG	1 cut(s)	854
NdeI	CATATG	1 cut(s)	287
NdeII	GATC	7 cut(s)	162, 418, 817, 822, 1375, 1389, 1658
NlaIII	CATG	7 cut(s)	629, 816, 1036, 1087, 1304, 1362, 1507
NlaIV	GGNNCC	2 cut(s)	1411, 1572
NmuCI	GTSAC	2 cut(s)	295, 1402
NspI	RCATGY	1 cut(s)	629
PaeI	GCATGC	1 cut(s)	629
PaeR7I	CTCGAG	1 cut(s)	697
PagI	TCATGA	2 cut(s)	1032, 1083
PaqCI	CACCTGC	1 cut(s)	1570
PcsI	WCGNNNNNNNCGW	1 cut(s)	660
PctI	GAATGC	2 cut(s)	544, 901
PdmI	GAANNNNTTC	1 cut(s)	863
PfeI	GAWTC	4 cut(s)	232, 880, 888, 1087
PflMI	CCANNNNNTGG	1 cut(s)	1655
PinAI	ACCGGT	1 cut(s)	1470
PsiI	TTATAA	1 cut(s)	1485
Psp124BI	GAGCTC	1 cut(s)	704
Psp6I	CCWGG	4 cut(s)	598, 1519, 1546, 1642
PspGI	CCWGG	4 cut(s)	598, 1519, 1546, 1642
PspN4I	GGNNCC	2 cut(s)	1411, 1572
PspPI	GGNCC	3 cut(s)	1410, 1570, 1646
PspXI	VCTCGAGB	1 cut(s)	697
PstNI	CAGNNNCTG	1 cut(s)	428
PsuI	RGATCY	2 cut(s)	1375, 1658
PvuII	CAGCTG	2 cut(s)	1451, 1652
RsaI	GTAC	5 cut(s)	434, 549, 607, 651, 1668
RsaNI	GTAC	5 cut(s)	433, 548, 606, 650, 1667
SacI	GAGCTC	1 cut(s)	704
SaqAI	TTAA	7 cut(s)	129, 168, 777, 968, 1122, 1308, 1478
Sau3AI	GATC	7 cut(s)	162, 418, 817, 822, 1375, 1389, 1658
Sau96I	GGNCC	3 cut(s)	1410, 1570, 1646
ScrFI	CCNGG	5 cut(s)	600, 854, 1521, 1548, 1644
SduI	GDGCHC	3 cut(s)	360, 704, 1511
SfaNI	GCATC	4 cut(s)	331, 1015, 1165, 1207
SfcI	CTRYAG	1 cut(s)	1662
Sfr274I	CTCGAG	1 cut(s)	697
SlaI	CTCGAG	1 cut(s)	697
SmlI	CTYRAG	3 cut(s)	40, 697, 1353
SmoI	CTYRAG	3 cut(s)	40, 697, 1353
SphI	GCATGC	1 cut(s)	629
SsiI	CCGC	8 cut(s)	258, 506, 986, 1413, 1610, 1623, 1670, 1743
SspMI	CTAG	3 cut(s)	1076, 1455, 1736
SstI	GAGCTC	1 cut(s)	704
StyD4I	CCNGG	5 cut(s)	598, 852, 1519, 1546, 1642
StyI	CCWWGG	2 cut(s)	675, 933
TaaI	ACNGT	8 cut(s)	125, 301, 364, 413, 473, 730, 1192, 1666
TaiI	ACGT	4 cut(s)	139, 393, 666, 803
TaqI	TCGA	5 cut(s)	200, 572, 654, 698, 947
TatI	WGTACW	3 cut(s)	547, 605, 649
TauI	GCSGC	6 cut(s)	260, 509, 989, 1415, 1612, 1745
TfiI	GAWTC	4 cut(s)	232, 880, 888, 1087
Tru1I	TTAA	7 cut(s)	129, 168, 777, 968, 1122, 1308, 1478
Tru9I	TTAA	7 cut(s)	129, 168, 777, 968, 1122, 1308, 1478
TscAI	CASTG	3 cut(s)	304, 469, 793
TseFI	GTSAC	2 cut(s)	295, 1402
TseI	GCWGC	4 cut(s)	750, 1451, 1690, 1703
Tsp45I	GTSAC	2 cut(s)	295, 1402
TspDTI	ATGAA	4 cut(s)	195, 1130, 1289, 1386
TspGWI	ACGGA	2 cut(s)	594, 1372
TspRI	CASTG	3 cut(s)	304, 469, 793
Van91I	CCANNNNNTGG	1 cut(s)	1655
XapI	RAATTY	4 cut(s)	862, 923, 943, 1118
XbaI	TCTAGA	1 cut(s)	1075
XceI	RCATGY	1 cut(s)	629
XhoI	CTCGAG	1 cut(s)	697
XmnI	GAANNNNTTC	1 cut(s)	863
XspI	CTAG	3 cut(s)	1076, 1455, 1736

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.