Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002327

Physical Location & Seq

Genomic Coordinates Forward (+)

17513618 .. 17518403

Gene Structure 4786 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G014580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGTGGAGCTCTTGTGCTCTGGTTGTTATACTACTTGCTTCTCTTCTTCTTCTTCTTCACTTGGCAGCTCTGGTCTCTGCTGATCAGGGCTCTACCACTAGTCAGTGGCAAACACTCAAAGGCAAGCCGCCTTTGGTCATAGCACGCGGGGGTTTTTCAGGACTATTACCTGGTTCTAGTTCTGACGCATACAAGTTCACATTGTCCACTAGTGTACCAGATGTGTTATTTTGGTGCGATGTCCAACTAACAAAGGAAGGAGCTGGAATTTGCTTTCCAGATGTGCTACTGAATAACAATTCTAATGTTGATATCATCTATCCAAAGAAGGACGAGACTTACATAGTTAACGGAGTTCCTACTGGCGGATGGTTCACCATCGATTATACTCTTAAGGACCTTGCAAATGTTTCTATTACTCAGGGAGTATTTAGTCGAGCTAATAGGTTTGATGACAATTTGTACCCAATTCTCACCGTTGAAGATGTGGCTATGAATTTGACACCACCAGGCTTATGGTTGAATATTGAGAACAATATCTTCTTCTCACAACACAACTTGAGTATGAGAAACTTTGTGCTTTCTGTAATGAGAAAAGTGGTTGTGAATTATATCTCATCACCGGAGGTGGCTTTCCTGAACAGTATTAAAGGAGTTGTTAGTCCAAGAACTACTAAGTTGGTCTTTCGGTTTCTGGAACAAACTGAGATTGAGCCTTCAACCAATCAAACTTATGGATCTCTGTTAAAGAATCTCACATTCATCAAGACATTTGCCTCGGGAATTCTGGTTCCTAAAACTTACATATGGCCAGTCACTAATGACAATTATTTAGAACCACACACTTCACTTGTTTTGGATGCTCATGAAGCAGAACTAATGGTATTTGCGTCCGATTTGGTGAATGATGTGCCATTACCCTACAACTACAGTTATGATCCATTAGCTGAGTGCCTGTCATTCATAGACAATGGCAACTTCACTGTTGATGGTGTGCTGTCTGACTTTCCGATAACTCCATCAGCAGCCATAAATTGCTTTGCTCACCTAAGACAAAATGCTCCAGTGCAAGACAAGCCTTTGGTTATATCGAAAAATGGAGCAAGCGGAGACTACCCTGATTGTACTGATTTGGCATATATGAAAGCACTTGAAGATGGTGTGAATGTACTCGATTGTCCTGTCCAAATGTCCAAGGACGGGATACCATTTTGCTCCAGTTCTATAAACCTTATTCATAGCACAACAGTTGCTCAATCAAGTTTTCAGAACTTAACAATGGTTGTTCCGGAGATTCAGGCTGACAATGGAATATATACCTTTAGCCTGACATGGGATCAGATCAAGACATTACAACCAAGGATATCAAACCCCCAGCAGACTCCGTACAAGTTGTACAGGAATCCAAGGTTCAAAAATGCTGGGACTTACAAGAGATTATCTGATTTTTTTACCTTGGCAAAGAACAGGAGCTCTGTTTCAGGTGTCATAATCAGCATAGAGTATGCAGCATATCTTGCAGAGAAGCAGGGATTAAGTGTAACAGATGCAGTCATTAATGAGTTGAACAAAGCTGGTTTGGACAATCAGACAGCCCTAGATGTCATGATTCAGTCCACTAATAGTTCTGTTCTAATGAAATTTAAGGAGGAAAGCAAGTGTAAACTTGTTTACAAGATCGAAGAAGTTATTGGTGATGCCCTTAATACAACTCTTCAGGACATCAAGAAGTTTGCCAATTCTGTGGTCATCAACAAGGCCTCTGTCCTTCCTGAAAATAGTGAATACATCACTGGAGTAACCAATGTTGTAACAAAGCTGCATGCATTTGATCTTCCTGTTTATGTCGAACTGTTCAGCAATGAGTATGTATCTCAAGCATGGGACTTCTTCTCTGATCCGACTGTTGAGATCAATTCATTCGTCTCCGGGGCCAATATTGATGGTGTTATCACAGACTTCCCCAAAACAGCTGCTAGATACAAAAGAAACAAGTGTTTATTTTATAAAGAGAGACCTAGCTACATGAAGCCTGTTCCGCCAGGCGCGCTGTTAACAGTTGTTTCTCCTCGTCAATTGCCACCGGCTGAGGCTCCGAATCCAGTGCTGATAGAGAGTGATGTGATTGAACCACCTTTGCCTTCCGCCTTAGCTCCAGGGATGACCAATGGATCTACAGTAGCACCACCACCACCACCACCTCCAAACGGGCAGCCTAAGATTGCTGCATGCTTCTTTCTCTCAAATCTGGCTTTGCTTGTTGCCACCCTTTTACTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006968 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008889 GO:0009505 GO:0009506 GO:0009653 GO:0009664 GO:0009791 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010016 GO:0010026 GO:0010052 GO:0010053 GO:0010054 GO:0010103 GO:0010374 GO:0010383 GO:0010441 GO:0010442 GO:0016020 GO:0016043 GO:0016049 GO:0016787 GO:0016788 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030243 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0046872 GO:0048364 GO:0048367 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0052541 GO:0055044 GO:0060560 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

GDPD

Protein Analysis

760

Amino Acids

83.47

Weight (kDa)

5.1

Isoelectric Point (pI)

41.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDPD	PF03009	367 - 657	2.1e-25	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66970 AT1G66970 AT1G66970 AT4G26690
fragaria_vesca	FvH4_3g13670 FvH4_3g13670 FvH4_3g13670 FvH4_3g30290 FvH4_3g30290
malus_domestica	MD03G1190400.v1.1 MD11G1207100.v1.1
prunus_persica	Prupe.4G228400_v2.0.a1 Prupe.4G228400_v2.0.a1
pyrus_communis	pycom03g14330 pycom03g14370 pycom11g18010
rosa_chinensis	RchiOBHm_Chr5g0022921 RchiOBHm_Chr5g0056171
rosa_laevigata	RLG00000032682 RLG00000035057 RLG00000035060
rosa_multiflora	Rmu_sc0000680.1_g000027 Rmu_sc0001787.1_g000024 Rmu_sc0002675.1_g000001
rosa_roxburghii	Rroxscaffold_1G00024130 Rroxscaffold_1G00056420
rosa_rugosa	Rorug05G0075500 Rorug05G0297800 Rorug05G0297800
rosa_samantha	Rh5AG162000 Rh5AG368900 Rh5BG161200 Rh5BG379900 Rh5CG175800 Rh5CG402700 Rh5DG162500 Rh5DG392700 Rh5DG392900
rosa_wichuraiana	Rw0G004450 Rw0G012690 Rw5G014580 Rw5G034630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2007
AccII	CGCG	2 cut(s)	147, 2048
AccIII	TCCGGA	1 cut(s)	1288
AciI	CCGC	6 cut(s)	128, 147, 366, 1107, 2039, 2145
AclWI	GGATC	5 cut(s)	745, 932, 1344, 1892, 2179
AcoI	YGGCCR	1 cut(s)	809
AcsI	RAATTY	4 cut(s)	267, 496, 783, 1640
AcuI	CTGAAG	1 cut(s)	1700
AfaI	GTAC	6 cut(s)	216, 464, 1126, 1170, 1388, 1397
AfiI	CCNNNNNNNGG	4 cut(s)	365, 1200, 1333, 2207
AflII	CTTAAG	1 cut(s)	392
AgsI	TTSAA	7 cut(s)	482, 523, 720, 1154, 1414, 1567, 2129
AhlI	ACTAGT	2 cut(s)	98, 209
AjnI	CCWGG	4 cut(s)	169, 508, 2041, 2155
AjuI	GAANNNNNNNTTGG	2 cut(s)	1674, 1706
AloI	GAACNNNNNNTCC	2 cut(s)	774, 806
Alw21I	GWGCWC	3 cut(s)	11, 19, 1475
Alw26I	GTCTC	5 cut(s)	79, 329, 1104, 1930, 2008
AlwI	GGATC	5 cut(s)	745, 932, 1344, 1892, 2179
Ama87I	CYCGRG	1 cut(s)	778
Aor13HI	TCCGGA	1 cut(s)	1288
AoxI	GGCC	3 cut(s)	809, 1758, 1932
ApeKI	GCWGC	7 cut(s)	65, 1025, 1508, 1819, 1973, 2212, 2225
ApoI	RAATTY	4 cut(s)	267, 496, 783, 1640
AseI	ATTAAT	1 cut(s)	1557
AspLEI	GCGC	2 cut(s)	2048, 2050
AspS9I	GGNCC	2 cut(s)	397, 1932
AsuC2I	CCSGG	1 cut(s)	1930
AsuHPI	GGTGA	6 cut(s)	367, 466, 612, 913, 1037, 1706
AvaI	CYCGRG	1 cut(s)	778
AvaII	GGWCC	1 cut(s)	397
BaeI	ACNNNNGTAYC	2 cut(s)	198, 231
BalI	TGGCCA	1 cut(s)	811
BanII	GRGCYC	3 cut(s)	11, 92, 1475
Bbv12I	GWGCWC	3 cut(s)	11, 19, 1475
BbvCI	CCTCAGC	1 cut(s)	2088
BbvI	GCAGC	7 cut(s)	77, 1037, 1520, 1806, 1960, 2212, 2224
BccI	CCATC	6 cut(s)	363, 386, 983, 1027, 1151, 1937
BcgI	CGANNNNNNTGC	2 cut(s)	2086, 2120
BciT130I	CCWGG	4 cut(s)	171, 510, 2043, 2157
BciVI	GTATCC	1 cut(s)	1197
BclI	TGATCA	1 cut(s)	82
BcnI	CCSGG	1 cut(s)	1930
BcoDI	GTCTC	5 cut(s)	79, 329, 1104, 1930, 2008
BcuI	ACTAGT	2 cut(s)	98, 209
BfaI	CTAG	6 cut(s)	99, 177, 210, 1598, 1977, 2019
BfmI	CTRYAG	2 cut(s)	928, 2175
BfrI	CTTAAG	1 cut(s)	392
BfuI	GTATCC	1 cut(s)	1197
BisI	GCNGC	8 cut(s)	66, 128, 1026, 1509, 1820, 1974, 2213, 2226
BlsI	GCNGC	8 cut(s)	67, 129, 1027, 1510, 1821, 1975, 2214, 2227
Bme1390I	CCNGG	5 cut(s)	171, 510, 1930, 2043, 2157
Bme18I	GGWCC	1 cut(s)	397
BmeT110I	CYCGRG	1 cut(s)	778
BmgT120I	GGNCC	2 cut(s)	397, 1932
BmiI	GGNNCC	3 cut(s)	792, 1933, 2094
BmrFI	CCNGG	5 cut(s)	171, 510, 1930, 2043, 2157
BmsI	GCATC	3 cut(s)	850, 1537, 1687
BpmI	CTGGAG	4 cut(s)	1047, 1201, 1815, 2139
Bpu10I	CCTNAGC	2 cut(s)	2088, 2149
BpuEI	CTTGAG	2 cut(s)	580, 1860
BpuMI	CCSGG	1 cut(s)	1930
Bsa29I	ATCGAT	1 cut(s)	381
BsaI	GGTCTC	2 cut(s)	79, 2008
BsaJI	CCNNGG	7 cut(s)	777, 1194, 1358, 1406, 1455, 1929, 2156
BsaWI	WCCGGW	2 cut(s)	622, 1288
BsaXI	ACNNNNNCTCC	1 cut(s)	28
Bsc4I	CCNNNNNNNGG	4 cut(s)	365, 1200, 1333, 2207
Bse118I	RCCGGY	1 cut(s)	2083
Bse1I	ACTGG	6 cut(s)	367, 812, 1064, 1218, 1798, 2102
Bse3DI	GCAATG	1 cut(s)	1867
BseAI	TCCGGA	1 cut(s)	1288
BseBI	CCWGG	4 cut(s)	171, 510, 2043, 2157
BseCI	ATCGAT	1 cut(s)	381
BseDI	CCNNGG	7 cut(s)	777, 1194, 1358, 1406, 1455, 1929, 2156
BseGI	GGATG	3 cut(s)	374, 865, 2166
BseLI	CCNNNNNNNGG	4 cut(s)	365, 1200, 1333, 2207
BseMI	GCAATG	1 cut(s)	1867
BseMII	CTCAG	4 cut(s)	434, 696, 939, 2079
BseNI	ACTGG	6 cut(s)	367, 812, 1064, 1218, 1798, 2102
BsePI	GCGCGC	1 cut(s)	2046
BseRI	GAGGAG	1 cut(s)	2058
BseXI	GCAGC	7 cut(s)	77, 1037, 1520, 1806, 1960, 2212, 2224
BseYI	CCCAGC	2 cut(s)	1374, 1421
Bsh1236I	CGCG	2 cut(s)	147, 2048
BshFI	GGCC	3 cut(s)	811, 1760, 1934
BshVI	ATCGAT	1 cut(s)	381
BsiHKAI	GWGCWC	3 cut(s)	11, 19, 1475
BsiHKCI	CYCGRG	1 cut(s)	778
BsiSI	CCGG	4 cut(s)	623, 1289, 1929, 2084
BslFI	GGGAC	2 cut(s)	1438, 1898
BslI	CCNNNNNNNGG	4 cut(s)	365, 1200, 1333, 2207
BsmAI	GTCTC	5 cut(s)	79, 329, 1104, 1930, 2008
BsmBI	CGTCTC	1 cut(s)	1930
BsmFI	GGGAC	2 cut(s)	1438, 1898
BsnI	GGCC	3 cut(s)	811, 1760, 1934
Bso31I	GGTCTC	2 cut(s)	79, 2008
BsoBI	CYCGRG	1 cut(s)	778
Bsp1286I	GDGCHC	4 cut(s)	11, 19, 92, 1475
Bsp13I	TCCGGA	1 cut(s)	1288
Bsp1407I	TGTACA	1 cut(s)	1395
BspACI	CCGC	6 cut(s)	128, 147, 366, 1107, 2039, 2145
BspANI	GGCC	3 cut(s)	811, 1760, 1934
BspCNI	CTCAG	4 cut(s)	433, 697, 940, 2080
BspDI	ATCGAT	1 cut(s)	381
BspEI	TCCGGA	1 cut(s)	1288
BspFNI	CGCG	2 cut(s)	147, 2048
BspHI	TCATGA	2 cut(s)	865, 1605
BspLI	GGNNCC	3 cut(s)	792, 1933, 2094
BspPI	GGATC	5 cut(s)	745, 932, 1344, 1892, 2179
BspTI	CTTAAG	1 cut(s)	392
BspTNI	GGTCTC	2 cut(s)	79, 2008
BsrDI	GCAATG	1 cut(s)	1867
BsrFI	RCCGGY	1 cut(s)	2083
BsrGI	TGTACA	1 cut(s)	1395
BsrI	ACTGG	6 cut(s)	367, 812, 1064, 1218, 1798, 2102
BssAI	RCCGGY	1 cut(s)	2083
BssECI	CCNNGG	7 cut(s)	777, 1194, 1358, 1406, 1455, 1929, 2156
BssHII	GCGCGC	1 cut(s)	2046
BssT1I	CCWWGG	4 cut(s)	1194, 1358, 1406, 1455
Bst2UI	CCWGG	4 cut(s)	171, 510, 2043, 2157
Bst4CI	ACNGT	9 cut(s)	478, 644, 932, 985, 1249, 1854, 1906, 2059, 2179
Bst6I	CTCTTC	2 cut(s)	48, 1719
BstAFI	CTTAAG	1 cut(s)	392
BstAPI	GCANNNNNTGC	1 cut(s)	1517
BstAUI	TGTACA	1 cut(s)	1395
BstC8I	GCNNGC	6 cut(s)	125, 145, 1105, 1824, 2048, 2230
BstDEI	CTNAG	8 cut(s)	420, 675, 705, 948, 1049, 2088, 2149, 2217
BstF5I	GGATG	3 cut(s)	374, 865, 2166
BstFNI	CGCG	2 cut(s)	147, 2048
BstHHI	GCGC	2 cut(s)	2048, 2050
BstMAI	GTCTC	5 cut(s)	79, 329, 1104, 1930, 2008
BstMWI	GCNNNNNNNGC	5 cut(s)	869, 1075, 1517, 2038, 2047
BstNI	CCWGG	4 cut(s)	171, 510, 2043, 2157
BstNSI	RCATGY	2 cut(s)	1826, 2232
BstSCI	CCNGG	5 cut(s)	169, 508, 1928, 2041, 2155
BstSFI	CTRYAG	2 cut(s)	928, 2175
BstUI	CGCG	2 cut(s)	147, 2048
BstV1I	GCAGC	7 cut(s)	77, 1037, 1520, 1806, 1960, 2212, 2224
BstX2I	RGATCY	2 cut(s)	737, 2171
BstXI	CCANNNNNNTGG	2 cut(s)	516, 1744
BstYI	RGATCY	2 cut(s)	737, 2171
Bsu15I	ATCGAT	1 cut(s)	381
BsuI	GTATCC	1 cut(s)	1197
BsuRI	GGCC	3 cut(s)	811, 1760, 1934
BsuTUI	ATCGAT	1 cut(s)	381
BtgZI	GCGATG	1 cut(s)	252
BtsCI	GGATG	3 cut(s)	374, 865, 2166
BtsIMutI	CAGTG	5 cut(s)	110, 981, 1071, 1791, 2109
Cac8I	GCNNGC	6 cut(s)	125, 145, 1105, 1824, 2048, 2230
CciI	TCATGA	2 cut(s)	865, 1605
CfoI	GCGC	2 cut(s)	2048, 2050
Cfr10I	RCCGGY	1 cut(s)	2083
Cfr13I	GGNCC	2 cut(s)	397, 1932
ClaI	ATCGAT	1 cut(s)	381
CseI	GACGC	2 cut(s)	194, 879
CsiI	ACCWGGT	1 cut(s)	169
Csp6I	GTAC	6 cut(s)	215, 463, 1125, 1169, 1387, 1396
CviAII	CATG	7 cut(s)	866, 1332, 1606, 1823, 1881, 2026, 2229
CviQI	GTAC	6 cut(s)	215, 463, 1125, 1169, 1387, 1396
DdeI	CTNAG	8 cut(s)	420, 675, 705, 948, 1049, 2088, 2149, 2217
EaeI	YGGCCR	1 cut(s)	809
Eam1104I	CTCTTC	2 cut(s)	48, 1719
EarI	CTCTTC	2 cut(s)	48, 1719
EciI	GGCGGA	3 cut(s)	381, 2028, 2134
Ecl136II	GAGCTC	2 cut(s)	9, 1473
Eco130I	CCWWGG	4 cut(s)	1194, 1358, 1406, 1455
Eco147I	AGGCCT	1 cut(s)	1760
Eco24I	GRGCYC	3 cut(s)	11, 92, 1475
Eco31I	GGTCTC	2 cut(s)	79, 2008
Eco32I	GATATC	2 cut(s)	313, 1365
Eco47I	GGWCC	1 cut(s)	397
Eco53kI	GAGCTC	2 cut(s)	9, 1473
Eco57I	CTGAAG	1 cut(s)	1700
Eco88I	CYCGRG	1 cut(s)	778
EcoICRI	GAGCTC	2 cut(s)	9, 1473
EcoO109I	RGGNCCY	1 cut(s)	397
EcoRI	GAATTC	1 cut(s)	783
EcoRII	CCWGG	4 cut(s)	169, 508, 2041, 2155
EcoRV	GATATC	2 cut(s)	313, 1365
EcoT14I	CCWWGG	4 cut(s)	1194, 1358, 1406, 1455
EcoT22I	ATGCAT	1 cut(s)	1828
EcoT38I	GRGCYC	3 cut(s)	11, 92, 1475
ErhI	CCWWGG	4 cut(s)	1194, 1358, 1406, 1455
Esp3I	CGTCTC	1 cut(s)	1930
FaeI	CATG	7 cut(s)	869, 1335, 1609, 1826, 1884, 2029, 2232
FalI	AAGNNNNNCTT	2 cut(s)	668, 700
FaqI	GGGAC	2 cut(s)	1438, 1898
FatI	CATG	7 cut(s)	865, 1331, 1605, 1822, 1880, 2025, 2228
FauI	CCCGC	1 cut(s)	140
FauNDI	CATATG	1 cut(s)	806
FbaI	TGATCA	1 cut(s)	82
Fnu4HI	GCNGC	8 cut(s)	66, 128, 1026, 1509, 1820, 1974, 2213, 2226
FokI	GGATG	3 cut(s)	381, 872, 2173
FriOI	GRGCYC	3 cut(s)	11, 92, 1475
Fsp4HI	GCNGC	8 cut(s)	66, 128, 1026, 1509, 1820, 1974, 2213, 2226
FspBI	CTAG	6 cut(s)	99, 177, 210, 1598, 1977, 2019
GlaI	GCGC	2 cut(s)	2047, 2049
GluI	GCNGC	8 cut(s)	66, 128, 1026, 1509, 1820, 1974, 2213, 2226
GsaI	CCCAGC	2 cut(s)	1378, 1425
GsuI	CTGGAG	4 cut(s)	1047, 1201, 1815, 2139
HaeIII	GGCC	3 cut(s)	811, 1760, 1934
HapII	CCGG	4 cut(s)	623, 1289, 1929, 2084
HgaI	GACGC	2 cut(s)	194, 879
HhaI	GCGC	2 cut(s)	2048, 2050
Hin1II	CATG	7 cut(s)	869, 1335, 1609, 1826, 1884, 2029, 2232
Hin6I	GCGC	2 cut(s)	2046, 2048
HinP1I	GCGC	2 cut(s)	2046, 2048
HincII	GTYRAC	2 cut(s)	349, 2055
HindII	GTYRAC	2 cut(s)	349, 2055
HinfI	GANTC	6 cut(s)	751, 1294, 1381, 1402, 1609, 2098
HpaI	GTTAAC	2 cut(s)	349, 2055
HpaII	CCGG	4 cut(s)	623, 1289, 1929, 2084
HphI	GGTGA	6 cut(s)	367, 466, 612, 913, 1037, 1706
Hpy166II	GTNNAC	9 cut(s)	198, 207, 215, 349, 375, 1617, 1664, 1672, 2055
Hpy8I	GTNNAC	9 cut(s)	198, 207, 215, 349, 375, 1617, 1664, 1672, 2055
HpyAV	CCTTC	5 cut(s)	251, 322, 726, 1778, 2151
HpyCH4III	ACNGT	9 cut(s)	478, 644, 932, 985, 1249, 1854, 1906, 2059, 2179
HpyCH4V	TGCA	8 cut(s)	404, 1069, 1508, 1520, 1550, 1822, 1826, 2228
HpyF10VI	GCNNNNNNNGC	5 cut(s)	869, 1075, 1517, 2038, 2047
HpyF3I	CTNAG	8 cut(s)	420, 675, 705, 948, 1049, 2088, 2149, 2217
Hsp92II	CATG	7 cut(s)	869, 1335, 1609, 1826, 1884, 2029, 2232
HspAI	GCGC	2 cut(s)	2046, 2048
Kpn2I	TCCGGA	1 cut(s)	1288
Ksp22I	TGATCA	1 cut(s)	82
KspAI	GTTAAC	2 cut(s)	349, 2055
LmnI	GCTCC	8 cut(s)	6, 260, 1066, 1100, 1220, 1470, 2098, 2158
Lsp1109I	GCAGC	7 cut(s)	77, 1037, 1520, 1806, 1960, 2212, 2224
LweI	GCATC	3 cut(s)	850, 1537, 1687
MabI	ACCWGGT	1 cut(s)	169
MaeI	CTAG	6 cut(s)	99, 177, 210, 1598, 1977, 2019
MaeIII	GTNAC	4 cut(s)	814, 1540, 1798, 1810
MfeI	CAATTG	1 cut(s)	2075
MflI	RGATCY	2 cut(s)	737, 2171
MhlI	GDGCHC	4 cut(s)	11, 19, 92, 1475
MlsI	TGGCCA	1 cut(s)	811
MluNI	TGGCCA	1 cut(s)	811
MlyI	GAGTC	1 cut(s)	1375
MmeI	TCCRAC	2 cut(s)	268, 1925
MnlI	CCTC	7 cut(s)	619, 787, 1642, 1771, 2079, 2083, 2211
Mox20I	TGGCCA	1 cut(s)	811
Mph1103I	ATGCAT	1 cut(s)	1828
MroI	TCCGGA	1 cut(s)	1288
MscI	TGGCCA	1 cut(s)	811
Msp20I	TGGCCA	1 cut(s)	811
MspA1I	CMGCKG	1 cut(s)	1973
MspCI	CTTAAG	1 cut(s)	392
MspI	CCGG	4 cut(s)	623, 1289, 1929, 2084
MspR9I	CCNGG	5 cut(s)	171, 510, 1930, 2043, 2157
MunI	CAATTG	1 cut(s)	2075
MvaI	CCWGG	4 cut(s)	171, 510, 2043, 2157
MvnI	CGCG	2 cut(s)	147, 2048
MwoI	GCNNNNNNNGC	5 cut(s)	869, 1075, 1517, 2038, 2047
NciI	CCSGG	1 cut(s)	1930
NdeI	CATATG	1 cut(s)	806
NlaIII	CATG	7 cut(s)	869, 1335, 1609, 1826, 1884, 2029, 2232
NlaIV	GGNNCC	3 cut(s)	792, 1933, 2094
NmuCI	GTSAC	1 cut(s)	814
NsiI	ATGCAT	1 cut(s)	1828
NspI	RCATGY	2 cut(s)	1826, 2232
PaeI	GCATGC	2 cut(s)	1826, 2232
PagI	TCATGA	2 cut(s)	865, 1605
PauI	GCGCGC	1 cut(s)	2046
PceI	AGGCCT	1 cut(s)	1760
PfeI	GAWTC	5 cut(s)	751, 1294, 1402, 1609, 2098
PkrI	GCNGC	8 cut(s)	67, 129, 1027, 1510, 1821, 1975, 2214, 2227
PleI	GAGTC	1 cut(s)	1375
PpsI	GAGTC	1 cut(s)	1375
PpuMI	RGGWCCY	1 cut(s)	397
PshBI	ATTAAT	1 cut(s)	1557
PsiI	TTATAA	1 cut(s)	2007
Psp124BI	GAGCTC	2 cut(s)	11, 1475
Psp5II	RGGWCCY	1 cut(s)	397
Psp6I	CCWGG	4 cut(s)	169, 508, 2041, 2155
PspFI	CCCAGC	2 cut(s)	1374, 1421
PspGI	CCWGG	4 cut(s)	169, 508, 2041, 2155
PspN4I	GGNNCC	3 cut(s)	792, 1933, 2094
PspPI	GGNCC	2 cut(s)	397, 1932
PspPPI	RGGWCCY	1 cut(s)	397
PsuI	RGATCY	2 cut(s)	737, 2171
PteI	GCGCGC	1 cut(s)	2046
PvuII	CAGCTG	1 cut(s)	1973
RsaI	GTAC	6 cut(s)	216, 464, 1126, 1170, 1388, 1397
RsaNI	GTAC	6 cut(s)	215, 463, 1125, 1169, 1387, 1396
SacI	GAGCTC	2 cut(s)	11, 1475
SatI	GCNGC	8 cut(s)	66, 128, 1026, 1509, 1820, 1974, 2213, 2226
Sau96I	GGNCC	2 cut(s)	397, 1932
SchI	GAGTC	1 cut(s)	1375
ScrFI	CCNGG	5 cut(s)	171, 510, 1930, 2043, 2157
SduI	GDGCHC	4 cut(s)	11, 19, 92, 1475
SexAI	ACCWGGT	1 cut(s)	169
SfaNI	GCATC	3 cut(s)	850, 1537, 1687
SfcI	CTRYAG	2 cut(s)	928, 2175
SinI	GGWCC	1 cut(s)	397
SmlI	CTYRAG	3 cut(s)	392, 559, 1875
SmoI	CTYRAG	3 cut(s)	392, 559, 1875
SpeI	ACTAGT	2 cut(s)	98, 209
SphI	GCATGC	2 cut(s)	1826, 2232
SseBI	AGGCCT	1 cut(s)	1760
SsiI	CCGC	6 cut(s)	128, 147, 366, 1107, 2039, 2145
SspI	AATATT	2 cut(s)	526, 1939
SspMI	CTAG	6 cut(s)	99, 177, 210, 1598, 1977, 2019
SstI	GAGCTC	2 cut(s)	11, 1475
StuI	AGGCCT	1 cut(s)	1760
StyD4I	CCNGG	5 cut(s)	169, 508, 1928, 2041, 2155
StyI	CCWWGG	4 cut(s)	1194, 1358, 1406, 1455
TaaI	ACNGT	9 cut(s)	478, 644, 932, 985, 1249, 1854, 1906, 2059, 2179
TaqI	TCGA	6 cut(s)	381, 436, 1091, 1173, 1680, 1848
TatI	WGTACW	3 cut(s)	1124, 1168, 1395
TauI	GCSGC	1 cut(s)	130
TfiI	GAWTC	5 cut(s)	751, 1294, 1402, 1609, 2098
TscAI	CASTG	5 cut(s)	110, 988, 1071, 1798, 2109
TseFI	GTSAC	1 cut(s)	814
TseI	GCWGC	7 cut(s)	65, 1025, 1508, 1819, 1973, 2212, 2225
Tsp45I	GTSAC	1 cut(s)	814
TspDTI	ATGAA	9 cut(s)	509, 751, 882, 952, 1157, 1226, 1652, 1908, 2042
TspGWI	ACGGA	2 cut(s)	366, 1374
TspRI	CASTG	5 cut(s)	110, 988, 1071, 1798, 2109
Vha464I	CTTAAG	1 cut(s)	392
VpaK11BI	GGWCC	1 cut(s)	397
VspI	ATTAAT	1 cut(s)	1557
XapI	RAATTY	4 cut(s)	267, 496, 783, 1640
XceI	RCATGY	2 cut(s)	1826, 2232
XcmI	CCANNNNNNNNNTGG	1 cut(s)	513
XspI	CTAG	6 cut(s)	99, 177, 210, 1598, 1977, 2019
Zsp2I	ATGCAT	1 cut(s)	1828

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.