Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002327

Physical Location & Seq

Genomic Coordinates Reverse (-)

59983779 .. 59991183

Gene Structure 7405 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035060

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGGCACCGCTTATCGAAGATCCAAGTCCCGACAAAGCCCCCCTCGGCTCGGCTCAGCTCGGCTCGGCTAATCAAAGCCGGCTCAATCCTTCAACGTGCGAGGCTTCTCCTGCAATGTGGAACTCACGCGCTCCGGTCGCCGTACTTGCTGCTCTTCTCTACTCAGTAGCTCTGGTCTCTGCTCAGGGATCTAGTCAATGGAAAACACTCACAGGAGATCCGCCTTTGGTCATAGCACGAGGGGGCTTTTCGGGACTCTTTCCTGGTTTCAGTTCTTTAGCTTTCAATTTGGCATTGCTCACTAGTGTACCAGATGTGGTATTATATTGTGATGTCCAACTGACAAAGGATGCAGCTGGAATTTGCTTTCCAGATTTGCGGCTGAATAACAATTCGAATGTCGATCAAATTTTTCCAAAGAAGGAAAATACTTACCCGGTTGATGGAGTTCTGACTAAAGGGTGGTTTAGCATTGACTATACTCTCAAAGACCTTGCGAATGTTAATGTTACTCAGGGAGTATATACTCGATCTAATAAGTATGATGGCAATATGTACCCAATTCTCACCGTAGAAGATGTGGGTGTGCAATTCAGACCACCAGGCTTATGGTTGAATATTGAGAAGAATATGTTCTTCACGCAACACAACTTGAGTATGAGAAACTATGTGCTTTCTGTATCAAAGAAAGTGGTTGTCAATTTTATCTCATCACCAGAGGTGGATTTCCTGAAAAGTATTAAAGCGCATGTTAGTCCAAGCACAACAAAGTTGATCTTTAAATTTCCTGAGGAAGCTGAGACTGAGCCTTCGACAAACCAGACTTATGGTTCTCTATTGAAGAATCTCACATTTATCACGACATTTGCCTCTGGACTTATAGTTCCTAAAACTTACATATGGCCTGTCACTGTGGACAATTATTTAGAACCTCACACTACCATTGTTTCGGATGCTCATAAAGCAGGGCTAACAGTATTTGTGTCAGGTTTGTATAATGACGTGCCATTCCCCTTCAATTACAGTTATGATCCAGTTTCGGAGTACCTGTCATTCTTCGACAACGGCGATTTCAGTGTTGACGGTGTGCTGTCTGACTTTCCCATAACTCCATCAGCAGCCATAGATTGTTATGCTCACCCAGAAAAGAATGCTTCAGTACAAGATAGACCTTTGGTTATCTCGAAAGACGGAGATAGCGGAGACTACCCTGGCTGTACTGACTTGGCATATAGGCATGCAATTGCAGACGGTGTAGATGTACTCGATTGTAACGTCCAAATGTCCAAGGACGGGATACCATTTTGCTCGAGCTCTATAAATCTTATTGATAGCACAGCAGTTGCTCAATCAAGCTTGAACAACTACACAATGGTTGTTCCTGAAATTAGGGTTGGCAATGGAATATATACCTTTAGCCTGACATGGGATCAGATCAAAACACTACAACCAACTATATCAACCCCAGAGAAAAAGTACAAGTTGTTCAGGAATCCAAGATTCAAGAATGATGGCACTTACTTGAAACTATCTGAATTTTTGACCTTGGCAAAGAATTCGAGTTCCCTATTAGGTGTCTTAATTGGCATAGAGCATGCGGCGTATCTTGTAGAGAAGAAGGGGCTACGTGTAACAGATGCAGTCATGACTGAGTTGAACAAAGCTGGTTTTGGTAATCAGACAGCCCTAGATGTCATGATTCAGTCCAGCAATAGTTCTGTTCTGATGAAATTTAAGGAGAAAAACAACTATAAACTTGTTTACAAGATTGACGAGGAAATTGGTGATGCCCCTGATAAAACTGTTCAGGACATCAAGAAGTTTGCCAATGCTGTGGTCATCAACAAGGCCTCTGTCTTTCCTCAAAATCAGGCATTCGTCAAAGGCGCAACCGATGTTGTCAAGAAGTTTAAAAAATTTAAACTACCTGTTTATGTTGAACTCTTCAGCAATGAGTATGTATCTCAAGCATGGGACTTCTTCTCAGATCCATCGGTGGAGATCAATTCATTTGTGACGGAGGCCGCAGTTGATGGTGTTATCACAGGCTTCCCCAAAACAGCTGCTAGATACAAAAGAAACCGGTGTTTACGTTATAAAAAGACACCTAGCTACATGAACCCTGTTCAGCCAGGCAGTTTGATACGAGTTGTTTCTCCTGGTTACTTGTCAGCTGCTGAGGCCCCAAATCCAGCCCTGACAGAGAGTGATGTGGTTGAGCCGCCTTTGCCGTCTGCCGAAACAGCCTTAGCTCCTGGGCCAGCTGGTGGATCTACAGTAGCACCACCACGGCCGAACGGGCAGCCTAAGACTGCTGCGTGCTTCTTTCTCTCAACTCTGGCTATGCTAGTTGCCACTCTTTTTCTTGTCCGAAATTGTGAAGCATTCAGTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006968 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008889 GO:0009505 GO:0009506 GO:0009653 GO:0009664 GO:0009791 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010016 GO:0010026 GO:0010052 GO:0010053 GO:0010054 GO:0010103 GO:0010374 GO:0010383 GO:0010441 GO:0010442 GO:0016020 GO:0016043 GO:0016049 GO:0016787 GO:0016788 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030243 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0046872 GO:0048364 GO:0048367 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0052541 GO:0055044 GO:0060560 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

GDPD

Protein Analysis

799

Amino Acids

87.22

Weight (kDa)

5.83

Isoelectric Point (pI)

38.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDPD	PF03009	110 - 369	5.1e-07	Glycerophosphoryl diester phosphodiesterase family
GDPD	PF03009	398 - 686	9.9e-25	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66970 AT1G66970 AT1G66970 AT4G26690
fragaria_vesca	FvH4_3g13670 FvH4_3g13670 FvH4_3g13670 FvH4_3g30290 FvH4_3g30290
malus_domestica	MD03G1190400.v1.1 MD11G1207100.v1.1
prunus_persica	Prupe.4G228400_v2.0.a1 Prupe.4G228400_v2.0.a1
pyrus_communis	pycom03g14330 pycom03g14370 pycom11g18010
rosa_chinensis	RchiOBHm_Chr5g0022921 RchiOBHm_Chr5g0056171
rosa_laevigata	RLG00000032682 RLG00000035057 RLG00000035060
rosa_multiflora	Rmu_sc0000680.1_g000027 Rmu_sc0001787.1_g000024 Rmu_sc0002675.1_g000001
rosa_roxburghii	Rroxscaffold_1G00024130 Rroxscaffold_1G00056420
rosa_rugosa	Rorug05G0075500 Rorug05G0297800 Rorug05G0297800
rosa_samantha	Rh5AG162000 Rh5AG368900 Rh5BG161200 Rh5BG379900 Rh5CG175800 Rh5CG402700 Rh5DG162500 Rh5DG392700 Rh5DG392900
rosa_wichuraiana	Rw0G004450 Rw0G012690 Rw5G014580 Rw5G034630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2097
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	1 cut(s)	2267
AccII	CGCG	1 cut(s)	129
AciI	CCGC	7 cut(s)	8, 221, 379, 1200, 1598, 2025, 2222
AclWI	GGATC	7 cut(s)	14, 196, 212, 1025, 1437, 1982, 2278
AcoI	YGGCCR	1 cut(s)	2291
AcsI	RAATTY	7 cut(s)	360, 408, 782, 1535, 1555, 1730, 1916
AcuI	CTGAAG	2 cut(s)	1140, 1930
AfaI	GTAC	8 cut(s)	144, 309, 557, 1046, 1161, 1219, 1263, 1478
AfiI	CCNNNNNNNGG	5 cut(s)	49, 443, 1293, 1426, 2267
AflIII	ACRYGT	1 cut(s)	1627
AgeI	ACCGGT	1 cut(s)	2082
AhlI	ACTAGT	1 cut(s)	302
AjiI	CACGTC	1 cut(s)	1003
AjnI	CCWGG	6 cut(s)	262, 601, 1210, 2131, 2158, 2254
AjuI	GAANNNNNNNTTGG	2 cut(s)	1377, 1409
AloI	GAACNNNNNNTCC	2 cut(s)	867, 899
Alw21I	GWGCWC	1 cut(s)	1316
Alw26I	GTCTC	3 cut(s)	181, 794, 1197
AlwI	GGATC	7 cut(s)	14, 196, 212, 1025, 1437, 1982, 2278
AlwNI	CAGNNNCTG	1 cut(s)	2177
Ama87I	CYCGRG	1 cut(s)	1309
AoxI	GGCC	6 cut(s)	902, 1848, 2022, 2181, 2258, 2291
ApeKI	GCWGC	7 cut(s)	149, 353, 1118, 2063, 2174, 2302, 2315
ApoI	RAATTY	7 cut(s)	360, 408, 782, 1535, 1555, 1730, 1916
ArsI	GACNNNNNNTTYG	2 cut(s)	793, 825
AsiGI	ACCGGT	1 cut(s)	2082
Asp700I	GAANNNNTTC	1 cut(s)	632
AspLEI	GCGC	3 cut(s)	131, 748, 1889
AspS9I	GGNCC	2 cut(s)	2182, 2258
AsuC2I	CCSGG	1 cut(s)	437
AsuHPI	GGTGA	4 cut(s)	559, 705, 1130, 1796
AsuII	TTCGAA	1 cut(s)	395
AvaI	CYCGRG	1 cut(s)	1309
AxyI	CCTNAGG	1 cut(s)	789
BaeI	ACNNNNGTAYC	2 cut(s)	291, 324
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	1316
BauI	CACGAG	1 cut(s)	237
Bbv12I	GWGCWC	1 cut(s)	1316
BbvCI	CCTCAGC	1 cut(s)	2178
BbvI	GCAGC	7 cut(s)	136, 365, 1130, 2050, 2161, 2302, 2314
BccI	CCATC	6 cut(s)	437, 539, 1120, 1505, 1999, 2027
BceAI	ACGGC	4 cut(s)	125, 1081, 2215, 2306
BcgI	CGANNNNNNTGC	2 cut(s)	1539, 1573
BciT130I	CCWGG	6 cut(s)	264, 603, 1212, 2133, 2160, 2256
BciVI	GTATCC	1 cut(s)	1290
BcnI	CCSGG	1 cut(s)	437
BcoDI	GTCTC	3 cut(s)	181, 794, 1197
BcuI	ACTAGT	1 cut(s)	302
BfaI	CTAG	6 cut(s)	192, 303, 1688, 2067, 2109, 2348
BfmI	CTRYAG	1 cut(s)	2274
BfuI	GTATCC	1 cut(s)	1290
BglI	GCCNNNNNGGC	1 cut(s)	2299
BlpI	GCTNAGC	1 cut(s)	54
Bme1390I	CCNGG	7 cut(s)	264, 437, 603, 1212, 2133, 2160, 2256
BmeT110I	CYCGRG	1 cut(s)	1309
BmgBI	CACGTC	1 cut(s)	1003
BmgT120I	GGNCC	2 cut(s)	2182, 2258
BmiI	GGNNCC	2 cut(s)	6, 2184
BmrFI	CCNGG	7 cut(s)	264, 437, 603, 1212, 2133, 2160, 2256
BmsI	GCATC	4 cut(s)	340, 943, 1627, 1777
Bpu10I	CCTNAGC	3 cut(s)	183, 2178, 2248
Bpu1102I	GCTNAGC	1 cut(s)	54
Bpu14I	TTCGAA	1 cut(s)	395
BpuEI	CTTGAG	2 cut(s)	673, 1950
BpuMI	CCSGG	1 cut(s)	437
BsaAI	YACGTR	1 cut(s)	1628
BsaI	GGTCTC	1 cut(s)	181
BsaJI	CCNNGG	6 cut(s)	43, 1210, 1287, 1545, 2255, 2288
BsaWI	WCCGGW	2 cut(s)	133, 2082
BsaXI	ACNNNNNCTCC	2 cut(s)	1034, 1064
Bsc4I	CCNNNNNNNGG	5 cut(s)	49, 443, 1293, 1426, 2267
Bse118I	RCCGGY	2 cut(s)	78, 2082
Bse1I	ACTGG	1 cut(s)	1034
Bse21I	CCTNAGG	1 cut(s)	789
Bse3DI	GCAATG	4 cut(s)	120, 293, 1405, 1957
BseBI	CCWGG	6 cut(s)	264, 603, 1212, 2133, 2160, 2256
BseDI	CCNNGG	6 cut(s)	43, 1210, 1287, 1545, 2255, 2288
BseGI	GGATG	2 cut(s)	355, 958
BseLI	CCNNNNNNNGG	5 cut(s)	49, 443, 1293, 1426, 2267
BseMI	GCAATG	4 cut(s)	120, 293, 1405, 1957
BseNI	ACTGG	1 cut(s)	1034
BseX3I	CGGCCG	1 cut(s)	2291
BseXI	GCAGC	7 cut(s)	136, 365, 1130, 2050, 2161, 2302, 2314
Bsh1236I	CGCG	1 cut(s)	129
Bsh1285I	CGRYCG	2 cut(s)	138, 2294
BshFI	GGCC	6 cut(s)	904, 1850, 2024, 2183, 2260, 2293
BshNI	GGYRCC	1 cut(s)	4
BshTI	ACCGGT	1 cut(s)	2082
BsiEI	CGRYCG	2 cut(s)	138, 2294
BsiHKAI	GWGCWC	1 cut(s)	1316
BsiHKCI	CYCGRG	1 cut(s)	1309
BsiSI	CCGG	4 cut(s)	79, 134, 437, 2083
BslFI	GGGAC	3 cut(s)	12, 267, 1988
BslI	CCNNNNNNNGG	5 cut(s)	49, 443, 1293, 1426, 2267
BsmAI	GTCTC	3 cut(s)	181, 794, 1197
BsmFI	GGGAC	3 cut(s)	12, 267, 1988
BsmI	GAATGC	3 cut(s)	1156, 1874, 2384
BsnI	GGCC	6 cut(s)	904, 1850, 2024, 2183, 2260, 2293
Bso31I	GGTCTC	1 cut(s)	181
BsoBI	CYCGRG	1 cut(s)	1309
Bsp119I	TTCGAA	1 cut(s)	395
Bsp1286I	GDGCHC	1 cut(s)	1316
Bsp1720I	GCTNAGC	1 cut(s)	54
BspACI	CCGC	7 cut(s)	8, 221, 379, 1200, 1598, 2025, 2222
BspANI	GGCC	6 cut(s)	904, 1850, 2024, 2183, 2260, 2293
BspFNI	CGCG	1 cut(s)	129
BspHI	TCATGA	2 cut(s)	1644, 1695
BspLI	GGNNCC	2 cut(s)	6, 2184
BspPI	GGATC	7 cut(s)	14, 196, 212, 1025, 1437, 1982, 2278
BspQI	GCTCTTC	1 cut(s)	159
BspT104I	TTCGAA	1 cut(s)	395
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	1 cut(s)	181
BsrDI	GCAATG	4 cut(s)	120, 293, 1405, 1957
BsrFI	RCCGGY	2 cut(s)	78, 2082
BsrI	ACTGG	1 cut(s)	1034
BssAI	RCCGGY	2 cut(s)	78, 2082
BssECI	CCNNGG	6 cut(s)	43, 1210, 1287, 1545, 2255, 2288
BssSI	CACGAG	1 cut(s)	237
BssT1I	CCWWGG	2 cut(s)	1287, 1545
Bst2BI	CACGAG	1 cut(s)	237
Bst2UI	CCWGG	6 cut(s)	264, 603, 1212, 2133, 2160, 2256
Bst4CI	ACNGT	8 cut(s)	571, 913, 976, 1025, 1085, 1253, 1804, 2278
Bst6I	CTCTTC	2 cut(s)	159, 1949
BstBAI	YACGTR	1 cut(s)	1628
BstBI	TTCGAA	1 cut(s)	395
BstC8I	GCNNGC	5 cut(s)	80, 1239, 1596, 2262, 2320
BstDSI	CCRYGG	1 cut(s)	2288
BstF5I	GGATG	2 cut(s)	355, 958
BstFNI	CGCG	1 cut(s)	129
BstHHI	GCGC	3 cut(s)	131, 748, 1889
BstMAI	GTCTC	3 cut(s)	181, 794, 1197
BstMCI	CGRYCG	2 cut(s)	138, 2294
BstMWI	GCNNNNNNNGC	8 cut(s)	110, 137, 146, 962, 2180, 2227, 2243, 2299
BstNI	CCWGG	6 cut(s)	264, 603, 1212, 2133, 2160, 2256
BstNSI	RCATGY	3 cut(s)	752, 1241, 1598
BstSCI	CCNGG	7 cut(s)	262, 435, 601, 1210, 2131, 2158, 2254
BstSFI	CTRYAG	1 cut(s)	2274
BstUI	CGCG	1 cut(s)	129
BstV1I	GCAGC	7 cut(s)	136, 365, 1130, 2050, 2161, 2302, 2314
BstX2I	RGATCY	5 cut(s)	19, 188, 217, 1987, 2270
BstXI	CCANNNNNNTGG	3 cut(s)	609, 827, 1834
BstYI	RGATCY	5 cut(s)	19, 188, 217, 1987, 2270
BstZI	CGGCCG	1 cut(s)	2291
Bsu36I	CCTNAGG	1 cut(s)	789
BsuI	GTATCC	1 cut(s)	1290
BsuRI	GGCC	6 cut(s)	904, 1850, 2024, 2183, 2260, 2293
BtgI	CCRYGG	1 cut(s)	2288
BtrI	CACGTC	1 cut(s)	1003
BtsCI	GGATG	2 cut(s)	355, 958
BtsIMutI	CAGTG	2 cut(s)	909, 1081
Cac8I	GCNNGC	5 cut(s)	80, 1239, 1596, 2262, 2320
CaiI	CAGNNNCTG	1 cut(s)	2177
CciI	TCATGA	2 cut(s)	1644, 1695
CfoI	GCGC	3 cut(s)	131, 748, 1889
Cfr10I	RCCGGY	2 cut(s)	78, 2082
Cfr13I	GGNCC	2 cut(s)	2182, 2258
Csp6I	GTAC	8 cut(s)	143, 308, 556, 1045, 1160, 1218, 1262, 1477
CspAI	ACCGGT	1 cut(s)	2082
CspCI	CAANNNNNGTGG	2 cut(s)	672, 707
CviAII	CATG	8 cut(s)	749, 1238, 1425, 1595, 1645, 1696, 1971, 2116
CviQI	GTAC	8 cut(s)	143, 308, 556, 1045, 1160, 1218, 1262, 1477
DraI	TTTAAA	3 cut(s)	781, 1912, 1921
EaeI	YGGCCR	1 cut(s)	2291
EagI	CGGCCG	1 cut(s)	2291
Eam1104I	CTCTTC	2 cut(s)	159, 1949
EarI	CTCTTC	2 cut(s)	159, 1949
EciI	GGCGGA	1 cut(s)	210
Ecl136II	GAGCTC	1 cut(s)	1314
EclXI	CGGCCG	1 cut(s)	2291
Eco130I	CCWWGG	2 cut(s)	1287, 1545
Eco147I	AGGCCT	1 cut(s)	1850
Eco24I	GRGCYC	1 cut(s)	1316
Eco31I	GGTCTC	1 cut(s)	181
Eco52I	CGGCCG	1 cut(s)	2291
Eco53kI	GAGCTC	1 cut(s)	1314
Eco57I	CTGAAG	2 cut(s)	1140, 1930
Eco81I	CCTNAGG	1 cut(s)	789
Eco88I	CYCGRG	1 cut(s)	1309
EcoICRI	GAGCTC	1 cut(s)	1314
EcoO109I	RGGNCCY	1 cut(s)	2182
EcoRI	GAATTC	1 cut(s)	1555
EcoRII	CCWGG	6 cut(s)	262, 601, 1210, 2131, 2158, 2254
EcoT14I	CCWWGG	2 cut(s)	1287, 1545
EcoT38I	GRGCYC	1 cut(s)	1316
ErhI	CCWWGG	2 cut(s)	1287, 1545
FaeI	CATG	8 cut(s)	752, 1241, 1428, 1598, 1648, 1699, 1974, 2119
FalI	AAGNNNNNCTT	2 cut(s)	761, 793
FaqI	GGGAC	3 cut(s)	12, 267, 1988
FatI	CATG	8 cut(s)	748, 1237, 1424, 1594, 1644, 1695, 1970, 2115
FauNDI	CATATG	1 cut(s)	899
FokI	GGATG	2 cut(s)	362, 965
FriOI	GRGCYC	1 cut(s)	1316
FspBI	CTAG	6 cut(s)	192, 303, 1688, 2067, 2109, 2348
GlaI	GCGC	3 cut(s)	130, 747, 1888
HaeIII	GGCC	6 cut(s)	904, 1850, 2024, 2183, 2260, 2293
HapII	CCGG	4 cut(s)	79, 134, 437, 2083
HhaI	GCGC	3 cut(s)	131, 748, 1889
Hin1II	CATG	8 cut(s)	752, 1241, 1428, 1598, 1648, 1699, 1974, 2119
Hin6I	GCGC	3 cut(s)	129, 746, 1887
HinP1I	GCGC	3 cut(s)	129, 746, 1887
HincII	GTYRAC	1 cut(s)	1081
HindII	GTYRAC	1 cut(s)	1081
HindIII	AAGCTT	1 cut(s)	1354
HinfI	GANTC	5 cut(s)	255, 844, 1492, 1500, 1699
HpaII	CCGG	4 cut(s)	79, 134, 437, 2083
HphI	GGTGA	4 cut(s)	559, 705, 1130, 1796
Hpy166II	GTNNAC	5 cut(s)	308, 916, 1081, 1762, 2090
Hpy8I	GTNNAC	5 cut(s)	308, 916, 1081, 1762, 2090
HpyAV	CCTTC	5 cut(s)	99, 415, 819, 1024, 1612
HpyCH4III	ACNGT	8 cut(s)	571, 913, 976, 1025, 1085, 1253, 1804, 2278
HpyCH4IV	ACGT	5 cut(s)	95, 1002, 1275, 1627, 2092
HpyCH4V	TGCA	6 cut(s)	113, 353, 589, 1241, 1247, 1640
HpyF10VI	GCNNNNNNNGC	8 cut(s)	110, 137, 146, 962, 2180, 2227, 2243, 2299
HpySE526I	ACGT	5 cut(s)	95, 1002, 1275, 1627, 2092
Hsp92II	CATG	8 cut(s)	752, 1241, 1428, 1598, 1648, 1699, 1974, 2119
HspAI	GCGC	3 cut(s)	129, 746, 1887
KroI	GCCGGC	1 cut(s)	78
KroNI	GCCGGC	1 cut(s)	80
LguI	GCTCTTC	1 cut(s)	159
LmnI	GCTCC	2 cut(s)	136, 2257
Lsp1109I	GCAGC	7 cut(s)	136, 365, 1130, 2050, 2161, 2302, 2314
LweI	GCATC	4 cut(s)	340, 943, 1627, 1777
MaeI	CTAG	6 cut(s)	192, 303, 1688, 2067, 2109, 2348
MaeII	ACGT	5 cut(s)	95, 1002, 1275, 1627, 2092
MaeIII	GTNAC	6 cut(s)	508, 907, 1271, 1630, 2014, 2162
MfeI	CAATTG	1 cut(s)	1242
MflI	RGATCY	5 cut(s)	19, 188, 217, 1987, 2270
MhlI	GDGCHC	1 cut(s)	1316
MlyI	GAGTC	1 cut(s)	249
MmeI	TCCRAC	1 cut(s)	361
MroNI	GCCGGC	1 cut(s)	78
MroXI	GAANNNNTTC	1 cut(s)	632
MseI	TTAA	7 cut(s)	504, 741, 780, 1580, 1734, 1911, 1920
MspA1I	CMGCKG	4 cut(s)	356, 2063, 2174, 2264
MspI	CCGG	4 cut(s)	79, 134, 437, 2083
MspR9I	CCNGG	7 cut(s)	264, 437, 603, 1212, 2133, 2160, 2256
MunI	CAATTG	1 cut(s)	1242
Mva1269I	GAATGC	3 cut(s)	1156, 1874, 2384
MvaI	CCWGG	6 cut(s)	264, 603, 1212, 2133, 2160, 2256
MvnI	CGCG	1 cut(s)	129
MwoI	GCNNNNNNNGC	8 cut(s)	110, 137, 146, 962, 2180, 2227, 2243, 2299
NaeI	GCCGGC	1 cut(s)	80
NciI	CCSGG	1 cut(s)	437
NdeI	CATATG	1 cut(s)	899
NgoMIV	GCCGGC	1 cut(s)	78
NlaIII	CATG	8 cut(s)	752, 1241, 1428, 1598, 1648, 1699, 1974, 2119
NlaIV	GGNNCC	2 cut(s)	6, 2184
NmeAIII	GCCGAG	4 cut(s)	24, 29, 39, 44
NmuCI	GTSAC	2 cut(s)	907, 2014
NspI	RCATGY	3 cut(s)	752, 1241, 1598
NspV	TTCGAA	1 cut(s)	395
PaeI	GCATGC	2 cut(s)	1241, 1598
PaeR7I	CTCGAG	1 cut(s)	1309
PagI	TCATGA	2 cut(s)	1644, 1695
PceI	AGGCCT	1 cut(s)	1850
PciSI	GCTCTTC	1 cut(s)	159
PcsI	WCGNNNNNNNCGW	2 cut(s)	1065, 1272
PctI	GAATGC	3 cut(s)	1156, 1874, 2384
PdiI	GCCGGC	1 cut(s)	80
PdmI	GAANNNNTTC	1 cut(s)	632
PfeI	GAWTC	4 cut(s)	844, 1492, 1500, 1699
PflMI	CCANNNNNTGG	1 cut(s)	2267
PinAI	ACCGGT	1 cut(s)	2082
PleI	GAGTC	1 cut(s)	249
PpsI	GAGTC	1 cut(s)	249
Ppu21I	YACGTR	1 cut(s)	1628
PsiI	TTATAA	1 cut(s)	2097
Psp124BI	GAGCTC	1 cut(s)	1316
Psp6I	CCWGG	6 cut(s)	262, 601, 1210, 2131, 2158, 2254
PspGI	CCWGG	6 cut(s)	262, 601, 1210, 2131, 2158, 2254
PspN4I	GGNNCC	2 cut(s)	6, 2184
PspPI	GGNCC	2 cut(s)	2182, 2258
PspXI	VCTCGAGB	1 cut(s)	1309
PsrI	GAACNNNNNNTAC	2 cut(s)	1469, 1501
PstNI	CAGNNNCTG	1 cut(s)	2177
PsuI	RGATCY	5 cut(s)	19, 188, 217, 1987, 2270
PvuII	CAGCTG	4 cut(s)	356, 2063, 2174, 2264
RsaI	GTAC	8 cut(s)	144, 309, 557, 1046, 1161, 1219, 1263, 1478
RsaNI	GTAC	8 cut(s)	143, 308, 556, 1045, 1160, 1218, 1262, 1477
SacI	GAGCTC	1 cut(s)	1316
SapI	GCTCTTC	1 cut(s)	159
SaqAI	TTAA	7 cut(s)	504, 741, 780, 1580, 1734, 1911, 1920
Sau96I	GGNCC	2 cut(s)	2182, 2258
SchI	GAGTC	1 cut(s)	249
ScrFI	CCNGG	7 cut(s)	264, 437, 603, 1212, 2133, 2160, 2256
SduI	GDGCHC	1 cut(s)	1316
SfaNI	GCATC	4 cut(s)	340, 943, 1627, 1777
SfcI	CTRYAG	1 cut(s)	2274
Sfr274I	CTCGAG	1 cut(s)	1309
SfuI	TTCGAA	1 cut(s)	395
SlaI	CTCGAG	1 cut(s)	1309
SmlI	CTYRAG	3 cut(s)	652, 1309, 1965
SmoI	CTYRAG	3 cut(s)	652, 1309, 1965
SpeI	ACTAGT	1 cut(s)	302
SphI	GCATGC	2 cut(s)	1241, 1598
SseBI	AGGCCT	1 cut(s)	1850
SsiI	CCGC	7 cut(s)	8, 221, 379, 1200, 1598, 2025, 2222
SspI	AATATT	1 cut(s)	619
SspMI	CTAG	6 cut(s)	192, 303, 1688, 2067, 2109, 2348
SstI	GAGCTC	1 cut(s)	1316
StuI	AGGCCT	1 cut(s)	1850
StyD4I	CCNGG	7 cut(s)	262, 435, 601, 1210, 2131, 2158, 2254
StyI	CCWWGG	2 cut(s)	1287, 1545
TaaI	ACNGT	8 cut(s)	571, 913, 976, 1025, 1085, 1253, 1804, 2278
TaiI	ACGT	5 cut(s)	98, 1005, 1278, 1630, 2095
TatI	WGTACW	4 cut(s)	1159, 1217, 1261, 1476
TauI	GCSGC	4 cut(s)	382, 1601, 2027, 2224
TfiI	GAWTC	4 cut(s)	844, 1492, 1500, 1699
Tru1I	TTAA	7 cut(s)	504, 741, 780, 1580, 1734, 1911, 1920
Tru9I	TTAA	7 cut(s)	504, 741, 780, 1580, 1734, 1911, 1920
TscAI	CASTG	2 cut(s)	916, 1081
TseFI	GTSAC	2 cut(s)	907, 2014
TseI	GCWGC	7 cut(s)	149, 353, 1118, 2063, 2174, 2302, 2315
Tsp45I	GTSAC	2 cut(s)	907, 2014
TspDTI	ATGAA	3 cut(s)	1742, 1998, 2132
TspGWI	ACGGA	2 cut(s)	1206, 2033
TspRI	CASTG	2 cut(s)	916, 1081
Van91I	CCANNNNNTGG	1 cut(s)	2267
XapI	RAATTY	7 cut(s)	360, 408, 782, 1535, 1555, 1730, 1916
XceI	RCATGY	3 cut(s)	752, 1241, 1598
XcmI	CCANNNNNNNNNTGG	1 cut(s)	606
XhoI	CTCGAG	1 cut(s)	1309
XmnI	GAANNNNTTC	1 cut(s)	632
XspI	CTAG	6 cut(s)	192, 303, 1688, 2067, 2109, 2348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.