Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0002327

Physical Location & Seq

Genomic Coordinates Reverse (-)

30156290 .. 30161360

Gene Structure 5071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1207100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGTGTAACTTACGCGCTCTGGTTGTAGCTGCTCTGCTTCTTCACTCTGTAGGAGCGCTGGTCTCTGCTCAGCGATCTAGTCAATGGAAAACACTTAGCGGAGATGCGCCTAAGGTTGTAGCACGCGGTGGATTTTCAGGGCTTTTTCCAGGTTTTAGTTCCGCGGCGTTCAATTTGGCATTGATCACAAGTGTACCCGATGTGATCTTATGGTGTGATGTGCAGTTAACGAAGGATGGAGCTGGAATTTGCTTTCCAGATCTCTTGTTGAATAATAATTCCAATATTAACGAGGTCTTGCCGCAAAAGGAGAAAACTTACCTAGTTAATGGAGTTAGTACCAAAGGATGGTTTACCGTGGATTATACTTGGGACGGCCTAGTAAATATCTCTGTTACTCAGGGGATATATTCTCGAACTAATAGGTTTGATGGCAATCTGTACCCAATTCTCCTTGTTGAAGATGTTGTTACGCAGTTCAAACCTCCAGGCTTATGGTTGAATATTCAGCATGATATTTTCTTCTCACAACACAACTTGAGTATGAGAAACTATGTGCTTTCTGTATCTAGACAAGTGGTTGTCAATTATATCTCATCACCGGAGGTGGCTTTTCTGAACAGTATTAAATCACGGGTTAGTCCGAGTGTAACAAAGCTGGTCTTTCGGTTTTTGGGACAAGATGACACAGAGCCTTCAACCAACCAAACTTATGGTTCCTTATTGAAGAATCTCACATTTATCAAGACATTTGCCTCAGGAATTCTAATTCCTAAAACTTACATATGGCCTGTCACCAATGATAATTATTTAGTGCCTCACACTTCAGTTGTTTTGGATGCTCATAAAGAAGGGCTAACAGTATTTGGGTCAGATTTTGTGAATGACGTTCCATTGCCCTACAATTACAGTTACGATCCAGTGTCTGAGTACCTGCAATTTGTTGACAATGGTGACTTCAGTGTTGATGGTGTACTATCTGACTTCCCAATAACACCATCAGAGGCCATAGAGTGTTTTGCTCACCTTGCAAGTAATGCTTCAGGACAAGCCAAGCCCTTGGTTATCTCGAAATACGGAGCAAGTGGAGACTTCCCTAGTTGTACTGACTTGGCATACACAAAAGCAATTGCAGATGGGGTAGATGTACTTGATTGTCCTGTACAAATATCCAAGGATGGGATACCATTTTGCGCAAGCTCTATAAATCTTATAGATAGCACGACAGTTGCTCAATCAGCTTTTAGCAACCTCACAACAGTTGTTCCAGAAATTAAGGCTGGCAGTGGAATATATACCTTTAGCCTAGCATGGAAAGACATTGAAGGCCTGACCCCGACAATATCAAATCCCTCGTCGAAGTATGCATTGTTCCGGAATCCAAGGTTCAAAACTGGTGGCAAGTACTTGACATTATCTGATTTCTTGGCCTTGGCAAAGAAGTCAAGCTCTCTTTCTGGTGTCTTGATCGGCATAGAGTACGCAGCGTATCTTGCAGAGGAGCAGAGATTAAGTGTAACTGATGCAGTCATGAATACCTTGAGCAAAGCAGGTTTTGATAATAAGACAGCGCTAAATGTCAAGATTCAGTCCACTAATAGTTCTGTTCTGATGAAGTTCAAGGAGAAAACCAGTTACGAACTTGTTTACAAAATTGAAGAGAATATTGGTGATACCCTTAGTTCAACTATTGAGGACATCAAGAAGTTTGCGGACTCTGTGGTCATCAACAAGGCCTCTATCTTTCCCGAAAGCGAGGCATTTATCACTGGAGTAACAGATGTTGTATCAAAACTACAAGCCGCTAAGCTTCCGGTTTATGTTGAACTTTTCAGCAATGAGTTTGTAACTCAAGCATGGGACTTCTTCTCAGATCCAACAGTGGAGATCAATTTATTTGTCTCAGGGGCCAATGTTGATGGCGTTATCACAGACTTTCCCAAAACGGCCGCGAGATACAAAAAGAACCCGTGTTTACGTCAAAAGGAAATACCCAGCTACATGAGTCCTATTCCGCCAGCCAGTCTGGTACAAGTCATTACCCCTTCATATTTGCCACCTGCTGAGGCTCCAAATCCAGTCCTGACGGAGAGTGATGTGATTGAGCCACCCTTGCCTTCCGTTACAGCGGTGGCTCCCGCGCCAACCGGTGGATCTACAGTGGGAGTTTCACCTCGACCTTCCGGTCAGCCTAAGATTGCCGCATGCTTCTTCCTCTCGTATCTGGCTATGGCGATTGCCGCTCTATTCCTGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006968 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008889 GO:0009505 GO:0009506 GO:0009653 GO:0009664 GO:0009791 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010016 GO:0010026 GO:0010052 GO:0010053 GO:0010054 GO:0010103 GO:0010374 GO:0010383 GO:0010441 GO:0010442 GO:0016020 GO:0016043 GO:0016049 GO:0016787 GO:0016788 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030243 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0046872 GO:0048364 GO:0048367 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0052541 GO:0055044 GO:0060560 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

GDPD

Protein Analysis

753

Amino Acids

81.58

Weight (kDa)

5.14

Isoelectric Point (pI)

40.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDPD	PF03009	360 - 649	2.7e-20	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66970 AT1G66970 AT1G66970 AT4G26690
fragaria_vesca	FvH4_3g13670 FvH4_3g13670 FvH4_3g13670 FvH4_3g30290 FvH4_3g30290
malus_domestica	MD03G1190400.v1.1 MD11G1207100.v1.1
prunus_persica	Prupe.4G228400_v2.0.a1 Prupe.4G228400_v2.0.a1
pyrus_communis	pycom03g14330 pycom03g14370 pycom11g18010
rosa_chinensis	RchiOBHm_Chr5g0022921 RchiOBHm_Chr5g0056171
rosa_laevigata	RLG00000032682 RLG00000035057 RLG00000035060
rosa_multiflora	Rmu_sc0000680.1_g000027 Rmu_sc0001787.1_g000024 Rmu_sc0002675.1_g000001
rosa_roxburghii	Rroxscaffold_1G00024130 Rroxscaffold_1G00056420
rosa_rugosa	Rorug05G0075500 Rorug05G0297800 Rorug05G0297800
rosa_samantha	Rh5AG162000 Rh5AG368900 Rh5BG161200 Rh5BG379900 Rh5CG175800 Rh5CG402700 Rh5DG162500 Rh5DG392700 Rh5DG392900
rosa_wichuraiana	Rw0G004450 Rw0G012690 Rw5G014580 Rw5G034630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2068
AasI	GACNNNNNNGTC	2 cut(s)	1721, 2184
Acc16I	TGCGCA	1 cut(s)	1195
Acc36I	ACCTGC	3 cut(s)	942, 1541, 2068
AccB7I	CCANNNNNTGG	2 cut(s)	348, 2150
AccBSI	CCGCTC	1 cut(s)	2243
AccII	CGCG	5 cut(s)	15, 126, 164, 1952, 2141
AccIII	TCCGGA	1 cut(s)	1374
AclWI	GGATC	3 cut(s)	911, 1868, 2161
AcoI	YGGCCR	1 cut(s)	1947
AcsI	RAATTY	2 cut(s)	246, 762
AcuI	CTGAAG	3 cut(s)	810, 943, 1026
AdeI	CACNNNGTG	1 cut(s)	128
AfeI	AGCGCT	2 cut(s)	57, 1572
AfiI	CCNNNNNNNGG	3 cut(s)	348, 1179, 2150
AgeI	ACCGGT	1 cut(s)	2147
AjnI	CCWGG	2 cut(s)	148, 487
AjuI	GAANNNNNNNTTGG	2 cut(s)	1650, 1682
AluBI	AGCT	8 cut(s)	29, 242, 658, 1200, 1241, 1449, 1810, 1998
AluI	AGCT	8 cut(s)	29, 242, 658, 1200, 1241, 1449, 1810, 1998
Alw26I	GTCTC	3 cut(s)	67, 1083, 1906
AlwI	GGATC	3 cut(s)	911, 1868, 2161
AlwNI	CAGNNNCTG	1 cut(s)	926
Aor13HI	TCCGGA	1 cut(s)	1374
Aor51HI	AGCGCT	2 cut(s)	57, 1572
AoxI	GGCC	8 cut(s)	376, 788, 1005, 1327, 1428, 1734, 1908, 1947
ApeKI	GCWGC	2 cut(s)	29, 1484
ApoI	RAATTY	2 cut(s)	246, 762
ArsI	GACNNNNNNTTYG	2 cut(s)	1340, 1372
AsiGI	ACCGGT	1 cut(s)	2147
AspLEI	GCGC	6 cut(s)	17, 58, 109, 1196, 1573, 2143
AspS9I	GGNCC	1 cut(s)	1908
AsuHPI	GGTGA	6 cut(s)	591, 787, 965, 1016, 1682, 2163
AxyI	CCTNAGG	2 cut(s)	111, 757
BaeI	ACNNNNGTAYC	2 cut(s)	177, 210
BbvCI	CCTCAGC	1 cut(s)	2064
BbvI	GCAGC	2 cut(s)	16, 1496
BccI	CCATC	8 cut(s)	230, 342, 425, 962, 1006, 1130, 1172, 1913
BceAI	ACGGC	2 cut(s)	391, 1962
BciT130I	CCWGG	2 cut(s)	150, 489
BciVI	GTATCC	1 cut(s)	1176
BclI	TGATCA	1 cut(s)	183
BcoDI	GTCTC	3 cut(s)	67, 1083, 1906
BfaI	CTAG	6 cut(s)	78, 323, 380, 570, 1098, 1307
BfmI	CTRYAG	2 cut(s)	48, 2157
BfoI	RGCGCY	2 cut(s)	59, 1574
BfuAI	ACCTGC	3 cut(s)	942, 1541, 2068
BfuI	GTATCC	1 cut(s)	1176
BglII	AGATCT	1 cut(s)	259
BisI	GCNGC	8 cut(s)	30, 165, 302, 1485, 1803, 1950, 2202, 2241
BlpI	GCTNAGC	2 cut(s)	69, 1806
BlsI	GCNGC	8 cut(s)	31, 166, 303, 1486, 1804, 1951, 2203, 2242
BmcAI	AGTACT	1 cut(s)	1406
Bme1390I	CCNGG	2 cut(s)	150, 489
BmgT120I	GGNCC	1 cut(s)	1908
BmiI	GGNNCC	4 cut(s)	718, 1909, 2070, 2136
BmrFI	CCNGG	2 cut(s)	150, 489
BmsI	GCATC	3 cut(s)	94, 829, 1513
BpmI	CTGGAG	2 cut(s)	471, 1791
Bpu10I	CCTNAGC	1 cut(s)	2064
Bpu1102I	GCTNAGC	2 cut(s)	69, 1806
BpuEI	CTTGAG	3 cut(s)	559, 1561, 1836
BsaBI	GATNNNNATC	1 cut(s)	435
BsaI	GGTCTC	1 cut(s)	67
BsaJI	CCNNGG	6 cut(s)	162, 357, 1059, 1173, 1382, 1431
BsaWI	WCCGGW	5 cut(s)	601, 1374, 1813, 2147, 2183
BsaXI	ACNNNNNCTCC	2 cut(s)	45, 75
Bsc4I	CCNNNNNNNGG	3 cut(s)	348, 1179, 2150
Bse118I	RCCGGY	1 cut(s)	2147
Bse1I	ACTGG	6 cut(s)	920, 1399, 1632, 1774, 2022, 2078
Bse21I	CCTNAGG	2 cut(s)	111, 757
Bse3DI	GCAATG	2 cut(s)	893, 1843
Bse8I	GATNNNNATC	1 cut(s)	435
BseAI	TCCGGA	1 cut(s)	1374
BseBI	CCWGG	2 cut(s)	150, 489
BseDI	CCNNGG	6 cut(s)	162, 357, 1059, 1173, 1382, 1431
BseGI	GGATG	4 cut(s)	241, 353, 844, 1183
BseJI	GATNNNNATC	1 cut(s)	435
BseLI	CCNNNNNNNGG	3 cut(s)	348, 1179, 2150
BseMI	GCAATG	2 cut(s)	893, 1843
BseMII	CTCAG	7 cut(s)	83, 413, 771, 918, 1884, 1917, 2055
BseNI	ACTGG	6 cut(s)	920, 1399, 1632, 1774, 2022, 2078
BseRI	GAGGAG	1 cut(s)	1514
BseX3I	CGGCCG	1 cut(s)	1947
BseXI	GCAGC	2 cut(s)	16, 1496
BseYI	CCCAGC	1 cut(s)	1994
BsgI	GTGCAG	1 cut(s)	242
Bsh1236I	CGCG	5 cut(s)	15, 126, 164, 1952, 2141
Bsh1285I	CGRYCG	1 cut(s)	1950
BshFI	GGCC	8 cut(s)	378, 790, 1007, 1329, 1430, 1736, 1910, 1949
BshTI	ACCGGT	1 cut(s)	2147
BsiEI	CGRYCG	1 cut(s)	1950
BsiSI	CCGG	5 cut(s)	602, 1375, 1814, 2148, 2184
BslFI	GGGAC	3 cut(s)	386, 690, 1874
BslI	CCNNNNNNNGG	3 cut(s)	348, 1179, 2150
BsmAI	GTCTC	3 cut(s)	67, 1083, 1906
BsmFI	GGGAC	3 cut(s)	386, 690, 1874
BsnI	GGCC	8 cut(s)	378, 790, 1007, 1329, 1430, 1736, 1910, 1949
Bso31I	GGTCTC	1 cut(s)	67
Bsp13I	TCCGGA	1 cut(s)	1374
Bsp1407I	TGTACA	1 cut(s)	1162
Bsp143I	GATC	9 cut(s)	74, 183, 204, 259, 916, 1467, 1873, 1887, 2153
Bsp1720I	GCTNAGC	2 cut(s)	69, 1806
BspANI	GGCC	8 cut(s)	378, 790, 1007, 1329, 1430, 1736, 1910, 1949
BspCNI	CTCAG	7 cut(s)	82, 412, 770, 919, 1883, 1916, 2056
BspEI	TCCGGA	1 cut(s)	1374
BspFNI	CGCG	5 cut(s)	15, 126, 164, 1952, 2141
BspHI	TCATGA	1 cut(s)	1530
BspLI	GGNNCC	4 cut(s)	718, 1909, 2070, 2136
BspMI	ACCTGC	3 cut(s)	942, 1541, 2068
BspPI	GGATC	3 cut(s)	911, 1868, 2161
BspTNI	GGTCTC	1 cut(s)	67
BsrBI	CCGCTC	1 cut(s)	2243
BsrDI	GCAATG	2 cut(s)	893, 1843
BsrFI	RCCGGY	1 cut(s)	2147
BsrGI	TGTACA	1 cut(s)	1162
BsrI	ACTGG	6 cut(s)	920, 1399, 1632, 1774, 2022, 2078
BssAI	RCCGGY	1 cut(s)	2147
BssECI	CCNNGG	6 cut(s)	162, 357, 1059, 1173, 1382, 1431
BssMI	GATC	9 cut(s)	74, 183, 204, 259, 916, 1467, 1873, 1887, 2153
BssT1I	CCWWGG	4 cut(s)	1059, 1173, 1382, 1431
Bst2UI	CCWGG	2 cut(s)	150, 489
Bst4CI	ACNGT	8 cut(s)	358, 623, 862, 911, 1228, 1261, 1882, 2161
Bst6I	CTCTTC	1 cut(s)	1653
BstAPI	GCANNNNNTGC	1 cut(s)	1037
BstAUI	TGTACA	1 cut(s)	1162
BstC8I	GCNNGC	5 cut(s)	124, 1198, 1282, 2019, 2206
BstDSI	CCRYGG	2 cut(s)	162, 357
BstF5I	GGATG	4 cut(s)	241, 353, 844, 1183
BstFNI	CGCG	5 cut(s)	15, 126, 164, 1952, 2141
BstH2I	RGCGCY	2 cut(s)	59, 1574
BstHHI	GCGC	6 cut(s)	17, 58, 109, 1196, 1573, 2143
BstKTI	GATC	9 cut(s)	77, 186, 207, 262, 919, 1470, 1876, 1890, 2156
BstMAI	GTCTC	3 cut(s)	67, 1083, 1906
BstMBI	GATC	9 cut(s)	74, 183, 204, 259, 916, 1467, 1873, 1887, 2153
BstMCI	CGRYCG	1 cut(s)	1950
BstMWI	GCNNNNNNNGC	6 cut(s)	1028, 1037, 1238, 1493, 2113, 2240
BstNI	CCWGG	2 cut(s)	150, 489
BstNSI	RCATGY	1 cut(s)	2208
BstSCI	CCNGG	2 cut(s)	148, 487
BstSFI	CTRYAG	2 cut(s)	48, 2157
BstUI	CGCG	5 cut(s)	15, 126, 164, 1952, 2141
BstV1I	GCAGC	2 cut(s)	16, 1496
BstX2I	RGATCY	3 cut(s)	259, 1873, 2153
BstXI	CCANNNNNNTGG	3 cut(s)	495, 713, 1060
BstYI	RGATCY	3 cut(s)	259, 1873, 2153
BstZI	CGGCCG	1 cut(s)	1947
Bsu36I	CCTNAGG	2 cut(s)	111, 757
BsuI	GTATCC	1 cut(s)	1176
BsuRI	GGCC	8 cut(s)	378, 790, 1007, 1329, 1430, 1736, 1910, 1949
BtgI	CCRYGG	2 cut(s)	162, 357
BtsCI	GGATG	4 cut(s)	241, 353, 844, 1183
BtsI	GCAGTG	1 cut(s)	1291
BtsIMutI	CAGTG	6 cut(s)	927, 967, 1291, 1767, 1887, 2166
BveI	ACCTGC	3 cut(s)	942, 1541, 2068
Cac8I	GCNNGC	5 cut(s)	124, 1198, 1282, 2019, 2206
CaiI	CAGNNNCTG	1 cut(s)	926
CciI	TCATGA	1 cut(s)	1530
CfoI	GCGC	6 cut(s)	17, 58, 109, 1196, 1573, 2143
Cfr10I	RCCGGY	1 cut(s)	2147
Cfr13I	GGNCC	1 cut(s)	1908
Cfr42I	CCGCGG	1 cut(s)	165
CspAI	ACCGGT	1 cut(s)	2147
CspCI	CAANNNNNGTGG	2 cut(s)	1378, 1413
CviAII	CATG	6 cut(s)	512, 1311, 1531, 1857, 2002, 2205
DpnI	GATC	9 cut(s)	76, 185, 206, 261, 918, 1469, 1875, 1889, 2155
DpnII	GATC	9 cut(s)	74, 183, 204, 259, 916, 1467, 1873, 1887, 2153
DraIII	CACNNNGTG	1 cut(s)	128
DrdI	GACNNNNNNGTC	2 cut(s)	1721, 2184
DseDI	GACNNNNNNGTC	2 cut(s)	1721, 2184
EaeI	YGGCCR	1 cut(s)	1947
EagI	CGGCCG	1 cut(s)	1947
Eam1104I	CTCTTC	1 cut(s)	1653
EarI	CTCTTC	1 cut(s)	1653
EciI	GGCGGA	1 cut(s)	2004
EclXI	CGGCCG	1 cut(s)	1947
Eco130I	CCWWGG	4 cut(s)	1059, 1173, 1382, 1431
Eco147I	AGGCCT	2 cut(s)	1329, 1736
Eco31I	GGTCTC	1 cut(s)	67
Eco47III	AGCGCT	2 cut(s)	57, 1572
Eco52I	CGGCCG	1 cut(s)	1947
Eco57I	CTGAAG	3 cut(s)	810, 943, 1026
Eco81I	CCTNAGG	2 cut(s)	111, 757
EcoRI	GAATTC	1 cut(s)	762
EcoRII	CCWGG	2 cut(s)	148, 487
EcoT14I	CCWWGG	4 cut(s)	1059, 1173, 1382, 1431
EcoT22I	ATGCAT	1 cut(s)	1369
ErhI	CCWWGG	4 cut(s)	1059, 1173, 1382, 1431
FaeI	CATG	6 cut(s)	515, 1314, 1534, 1860, 2005, 2208
FalI	AAGNNNNNCTT	4 cut(s)	647, 679, 1024, 1056
FaqI	GGGAC	3 cut(s)	386, 690, 1874
FatI	CATG	6 cut(s)	511, 1310, 1530, 1856, 2001, 2204
FauI	CCCGC	1 cut(s)	2146
FauNDI	CATATG	1 cut(s)	785
FbaI	TGATCA	1 cut(s)	183
Fnu4HI	GCNGC	8 cut(s)	30, 165, 302, 1485, 1803, 1950, 2202, 2241
FokI	GGATG	4 cut(s)	248, 360, 851, 1190
Fsp4HI	GCNGC	8 cut(s)	30, 165, 302, 1485, 1803, 1950, 2202, 2241
FspBI	CTAG	6 cut(s)	78, 323, 380, 570, 1098, 1307
FspI	TGCGCA	1 cut(s)	1195
GlaI	GCGC	6 cut(s)	16, 57, 108, 1195, 1572, 2142
GluI	GCNGC	8 cut(s)	30, 165, 302, 1485, 1803, 1950, 2202, 2241
GsaI	CCCAGC	1 cut(s)	1998
GsuI	CTGGAG	2 cut(s)	471, 1791
HaeII	RGCGCY	2 cut(s)	59, 1574
HaeIII	GGCC	8 cut(s)	378, 790, 1007, 1329, 1430, 1736, 1910, 1949
HapII	CCGG	5 cut(s)	602, 1375, 1814, 2148, 2184
HhaI	GCGC	6 cut(s)	17, 58, 109, 1196, 1573, 2143
Hin1II	CATG	6 cut(s)	515, 1314, 1534, 1860, 2005, 2208
Hin6I	GCGC	6 cut(s)	15, 56, 107, 1194, 1571, 2141
HinP1I	GCGC	6 cut(s)	15, 56, 107, 1194, 1571, 2141
HincII	GTYRAC	2 cut(s)	228, 946
HindII	GTYRAC	2 cut(s)	228, 946
HindIII	AAGCTT	1 cut(s)	1808
HinfI	GANTC	5 cut(s)	730, 1378, 1585, 1715, 2005
HpaI	GTTAAC	1 cut(s)	228
HpaII	CCGG	5 cut(s)	602, 1375, 1814, 2148, 2184
HphI	GGTGA	6 cut(s)	591, 787, 965, 1016, 1682, 2163
Hpy166II	GTNNAC	8 cut(s)	194, 228, 354, 946, 974, 1593, 1648, 1976
Hpy8I	GTNNAC	8 cut(s)	194, 228, 354, 946, 974, 1593, 1648, 1976
Hpy99I	CGWCG	1 cut(s)	1360
HpyAV	CCTTC	7 cut(s)	226, 705, 845, 1319, 2055, 2127, 2190
HpyCH4III	ACNGT	8 cut(s)	358, 623, 862, 911, 1228, 1261, 1882, 2161
HpyCH4IV	ACGT	2 cut(s)	888, 1978
HpyCH4V	TGCA	7 cut(s)	223, 937, 1031, 1133, 1367, 1496, 1526
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1028, 1037, 1238, 1493, 2113, 2240
HpySE526I	ACGT	2 cut(s)	888, 1978
Hsp92II	CATG	6 cut(s)	515, 1314, 1534, 1860, 2005, 2208
HspAI	GCGC	6 cut(s)	15, 56, 107, 1194, 1571, 2141
Kpn2I	TCCGGA	1 cut(s)	1374
Ksp22I	TGATCA	1 cut(s)	183
KspAI	GTTAAC	1 cut(s)	228
KspI	CCGCGG	1 cut(s)	165
Kzo9I	GATC	9 cut(s)	74, 183, 204, 259, 916, 1467, 1873, 1887, 2153
LmnI	GCTCC	6 cut(s)	53, 239, 1079, 1501, 2074, 2140
Lsp1109I	GCAGC	2 cut(s)	16, 1496
LweI	GCATC	3 cut(s)	94, 829, 1513
MaeI	CTAG	6 cut(s)	78, 323, 380, 570, 1098, 1307
MaeII	ACGT	2 cut(s)	888, 1978
MalI	GATC	9 cut(s)	76, 185, 206, 261, 918, 1469, 1875, 1889, 2155
MbiI	CCGCTC	1 cut(s)	2243
MboI	GATC	9 cut(s)	74, 183, 204, 259, 916, 1467, 1873, 1887, 2153
MboII	GAAGA	7 cut(s)	32, 473, 514, 739, 1670, 1858, 2203
MfeI	CAATTG	1 cut(s)	1128
MflI	RGATCY	3 cut(s)	259, 1873, 2153
MlyI	GAGTC	2 cut(s)	1709, 2014
MmeI	TCCRAC	1 cut(s)	1901
Mph1103I	ATGCAT	1 cut(s)	1369
MroI	TCCGGA	1 cut(s)	1374
MseI	TTAA	6 cut(s)	227, 288, 327, 627, 1275, 1511
MspA1I	CMGCKG	2 cut(s)	164, 2129
MspI	CCGG	5 cut(s)	602, 1375, 1814, 2148, 2184
MspR9I	CCNGG	2 cut(s)	150, 489
MunI	CAATTG	1 cut(s)	1128
MvaI	CCWGG	2 cut(s)	150, 489
MvnI	CGCG	5 cut(s)	15, 126, 164, 1952, 2141
MwoI	GCNNNNNNNGC	6 cut(s)	1028, 1037, 1238, 1493, 2113, 2240
NdeI	CATATG	1 cut(s)	785
NdeII	GATC	9 cut(s)	74, 183, 204, 259, 916, 1467, 1873, 1887, 2153
NlaIII	CATG	6 cut(s)	515, 1314, 1534, 1860, 2005, 2208
NlaIV	GGNNCC	4 cut(s)	718, 1909, 2070, 2136
NmuCI	GTSAC	2 cut(s)	793, 953
NsbI	TGCGCA	1 cut(s)	1195
NsiI	ATGCAT	1 cut(s)	1369
NspI	RCATGY	1 cut(s)	2208
PaeI	GCATGC	1 cut(s)	2208
PagI	TCATGA	1 cut(s)	1530
PaqCI	CACCTGC	1 cut(s)	2068
PceI	AGGCCT	2 cut(s)	1329, 1736
PfeI	GAWTC	3 cut(s)	730, 1378, 1585
PflMI	CCANNNNNTGG	2 cut(s)	348, 2150
PinAI	ACCGGT	1 cut(s)	2147
PkrI	GCNGC	8 cut(s)	31, 166, 303, 1486, 1804, 1951, 2203, 2242
PleI	GAGTC	2 cut(s)	1709, 2013
PpsI	GAGTC	2 cut(s)	1709, 2013
Psp6I	CCWGG	2 cut(s)	148, 487
PspFI	CCCAGC	1 cut(s)	1994
PspGI	CCWGG	2 cut(s)	148, 487
PspN4I	GGNNCC	4 cut(s)	718, 1909, 2070, 2136
PspPI	GGNCC	1 cut(s)	1908
PsrI	GAACNNNNNNTAC	2 cut(s)	1355, 1387
PstNI	CAGNNNCTG	1 cut(s)	926
PsuI	RGATCY	3 cut(s)	259, 1873, 2153
SacII	CCGCGG	1 cut(s)	165
SaqAI	TTAA	6 cut(s)	227, 288, 327, 627, 1275, 1511
SatI	GCNGC	8 cut(s)	30, 165, 302, 1485, 1803, 1950, 2202, 2241
Sau3AI	GATC	9 cut(s)	74, 183, 204, 259, 916, 1467, 1873, 1887, 2153
Sau96I	GGNCC	1 cut(s)	1908
ScaI	AGTACT	1 cut(s)	1406
SchI	GAGTC	2 cut(s)	1709, 2014
ScrFI	CCNGG	2 cut(s)	150, 489
SfaNI	GCATC	3 cut(s)	94, 829, 1513
SfcI	CTRYAG	2 cut(s)	48, 2157
Sfr303I	CCGCGG	1 cut(s)	165
SgrBI	CCGCGG	1 cut(s)	165
SmlI	CTYRAG	3 cut(s)	538, 1540, 1851
SmoI	CTYRAG	3 cut(s)	538, 1540, 1851
SphI	GCATGC	1 cut(s)	2208
SseBI	AGGCCT	2 cut(s)	1329, 1736
SspI	AATATT	3 cut(s)	286, 505, 1666
SspMI	CTAG	6 cut(s)	78, 323, 380, 570, 1098, 1307
StuI	AGGCCT	2 cut(s)	1329, 1736
StyD4I	CCNGG	2 cut(s)	148, 487
StyI	CCWWGG	4 cut(s)	1059, 1173, 1382, 1431
TaaI	ACNGT	8 cut(s)	358, 623, 862, 911, 1228, 1261, 1882, 2161
TaiI	ACGT	2 cut(s)	891, 1981
TaqI	TCGA	4 cut(s)	415, 1070, 1358, 2176
TatI	WGTACW	5 cut(s)	973, 1103, 1147, 1162, 1404
TauI	GCSGC	6 cut(s)	167, 304, 1805, 1952, 2204, 2243
TfiI	GAWTC	3 cut(s)	730, 1378, 1585
Tru1I	TTAA	6 cut(s)	227, 288, 327, 627, 1275, 1511
Tru9I	TTAA	6 cut(s)	227, 288, 327, 627, 1275, 1511
TscAI	CASTG	6 cut(s)	927, 967, 1291, 1774, 1887, 2166
TseFI	GTSAC	2 cut(s)	793, 953
TseI	GCWGC	2 cut(s)	29, 1484
Tsp45I	GTSAC	2 cut(s)	793, 953
TspDTI	ATGAA	3 cut(s)	1547, 1628, 2037
TspGWI	ACGGA	3 cut(s)	1092, 2102, 2110
TspRI	CASTG	6 cut(s)	927, 967, 1291, 1774, 1887, 2166
Van91I	CCANNNNNTGG	2 cut(s)	348, 2150
XapI	RAATTY	2 cut(s)	246, 762
XbaI	TCTAGA	1 cut(s)	569
XceI	RCATGY	1 cut(s)	2208
XspI	CTAG	6 cut(s)	78, 323, 380, 570, 1098, 1307
ZrmI	AGTACT	1 cut(s)	1406
Zsp2I	ATGCAT	1 cut(s)	1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.