Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0002327

Physical Location & Seq

Genomic Coordinates Forward (+)

17108520 .. 17113809

Gene Structure 5290 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG175800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGAATTTGACACCACCAGGCTTATGGTTGAATATTGAGAACAATATCTTCTTCTCACAACACAACTTGAGTATGAGAAACTTTGTGCCTTCTGTAATGAGAAAAGTGGTTGTGAATTATATCTCATCACCGGAGGTGGCTTTCCTGAACAGTATTAAAGGAGTTGTTAGTCCAAGAACTACTAAGTTGGTCTTTCGGTTTCTGGAACAAACTGAGATTGAGCCTTCAACCAATCAAACTTATGGATCTCTGTTAAAGAATCTCACATTCATCAAGACATTTGCCTCCGGAATTCTAGTTCCTAAAACTTACATATGGCCAGTCACTAATGACAATTATTTAGAACCACACACTTCACTTGTTTTGGATGCTCATGAAGCAGAACTAATGGTATTTGCGTCCGATTTGGTGAATGATGTGCCATTACCCTACAATTACAGTTATGATCCATTAGCTGAGTGCTTGTCATTCATAGACAATGGCAACTTCACTGTTGATGGTGTGCTGTCTGACTTTCCGATAACTTCATCAGCAGCCATAGATTGCTTTGCTCACCTAAGTCAAAATGCTCCAGTGCAAGACAAGCCTTTGATTATATCGAAAAATGGAGCAAGTGGAGACTACCCTGATTGTACTGATTTGGCATATATGAAAGCACTTGAAGATGGTGTGAATGTACTCGATTGTCCTGTCCAAATGTCCAAGGACGGGATACCATTTTGCTCCAGTTCTATAAACCTTATTCATAGCACAACAGTTGCTCAATCAAGTTTTCAGAACTTAACAATGGTTGTTCCAGAGATTCAGGCTGACAATGGAATATATACCTTTAGCCTGACATGGGAACAGATCAAGACATTACAACCAAGTATATCAAACCCCCAGCAGACTCTGTACAAGTTGTACAGGAATCCAAGGTTCAAAAGTGCTGGGACTTACAAGAGATTATCTGATTTTTTTACCTTGGCAAAGAACAGGAGCTCTGTTTCAGGTGTCATAATCAGCATAGAGTATGCAGCATATCTTGCAGAGAAGCAGGGATTAAGTGTAACAGATGCAGTCATTAATGAGTTGAACAAAGCTGGTTTGGACAATCAGACAGCCCTAGATGTCATGATTCAGTCCACTAATAGTTCTGTTCTAATGAAATTTAAGGAGGAAAGCAAGTGTAAACTTGTTTACAAGATCGAAGAAGTTATTGGTGATGCCCTTAATACAACTCTTCAGGACATCAAGAAGTTTGCCAATTCTGTGGTCATCAACAAGGCCTCTGTCCTTCCTGAAAATAGTGAATACATCACTGGAGCAACCAATGTTGTAACAAAGCTGCATGCATTTGATCTTCCTGTTTATGTCGAACTGTTCAGCAATGAGTATGTATCTCAAGCATGGGACTTCTTCTCTGATCCAACTGTTGAGATCAATTCATTTGTCTCCGGGGCCAATGTTGATGGTGTTATCACAGACTTCCCCAAAACAGCTGCTAGATACAAAAGAAACAGGTGTTTATTTTATAAAGAGAGACCTAGCTACATGAAGCCTGTTCCGCCAGGCGCGCTGTTAACAGTTGTTTCTCCTCGTCAATTGCCACCGGCTGAGGCTCCGAATCCAGTGCTGATAGAGAGTGATGTGATTGAACCACCTTTGCCTTCCGCCTTAGCTCCAGGGATCACCAATGGATCGACAGTAGCACCACCACCACCACCTCCAAACGGGCAGCCTAAGATTGCTGCATGCTTCTTTCTCTCAAATCTGGCTTTGCTTGTTGCCAACCTTTTACTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0006968 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008889 GO:0009505 GO:0009506 GO:0009653 GO:0009664 GO:0009791 GO:0009826 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010016 GO:0010026 GO:0010052 GO:0010053 GO:0010054 GO:0010103 GO:0010374 GO:0010383 GO:0010441 GO:0010442 GO:0016020 GO:0016043 GO:0016049 GO:0016787 GO:0016788 GO:0021700 GO:0022622 GO:0030054 GO:0030154 GO:0030243 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042578 GO:0043167 GO:0043169 GO:0043170 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044425 GO:0044459 GO:0044464 GO:0045229 GO:0046658 GO:0046872 GO:0048364 GO:0048367 GO:0048468 GO:0048469 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0052541 GO:0055044 GO:0060560 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00564 map00564

Pfam Domains

Protein Families

GDPD

Protein Analysis

595

Amino Acids

65.48

Weight (kDa)

5.09

Isoelectric Point (pI)

45.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDPD	PF03009	203 - 493	5.5e-26	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66970 AT1G66970 AT1G66970 AT4G26690
fragaria_vesca	FvH4_3g13670 FvH4_3g13670 FvH4_3g13670 FvH4_3g30290 FvH4_3g30290
malus_domestica	MD03G1190400.v1.1 MD11G1207100.v1.1
prunus_persica	Prupe.4G228400_v2.0.a1 Prupe.4G228400_v2.0.a1
pyrus_communis	pycom03g14330 pycom03g14370 pycom11g18010
rosa_chinensis	RchiOBHm_Chr5g0022921 RchiOBHm_Chr5g0056171
rosa_laevigata	RLG00000032682 RLG00000035057 RLG00000035060
rosa_multiflora	Rmu_sc0000680.1_g000027 Rmu_sc0001787.1_g000024 Rmu_sc0002675.1_g000001
rosa_roxburghii	Rroxscaffold_1G00024130 Rroxscaffold_1G00056420
rosa_rugosa	Rorug05G0075500 Rorug05G0297800 Rorug05G0297800
rosa_samantha	Rh5AG162000 Rh5AG368900 Rh5BG161200 Rh5BG379900 Rh5CG175800 Rh5CG402700 Rh5DG162500 Rh5DG392700 Rh5DG392900
rosa_wichuraiana	Rw0G004450 Rw0G012690 Rw5G014580 Rw5G034630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1515
AccII	CGCG	1 cut(s)	1556
AccIII	TCCGGA	1 cut(s)	287
AciI	CCGC	2 cut(s)	1547, 1653
AclWI	GGATC	5 cut(s)	253, 440, 1400, 1676, 1687
AcoI	YGGCCR	1 cut(s)	317
AcsI	RAATTY	3 cut(s)	4, 291, 1148
AcuI	CTGAAG	1 cut(s)	1208
AfaI	GTAC	4 cut(s)	634, 678, 896, 905
AfiI	CCNNNNNNNGG	3 cut(s)	708, 841, 1712
AgsI	TTSAA	6 cut(s)	31, 228, 662, 922, 1075, 1637
AjnI	CCWGG	3 cut(s)	16, 1549, 1663
AjuI	GAANNNNNNNTTGG	2 cut(s)	1182, 1214
AloI	GAACNNNNNNTCC	2 cut(s)	282, 314
AluBI	AGCT	7 cut(s)	455, 981, 1082, 1327, 1481, 1530, 1661
AluI	AGCT	7 cut(s)	455, 981, 1082, 1327, 1481, 1530, 1661
Alw21I	GWGCWC	1 cut(s)	983
Alw26I	GTCTC	3 cut(s)	612, 1438, 1516
AlwI	GGATC	5 cut(s)	253, 440, 1400, 1676, 1687
AlwNI	CAGNNNCTG	1 cut(s)	892
Aor13HI	TCCGGA	1 cut(s)	287
AoxI	GGCC	3 cut(s)	317, 1266, 1440
ApeKI	GCWGC	6 cut(s)	533, 1016, 1327, 1481, 1717, 1730
ApoI	RAATTY	3 cut(s)	4, 291, 1148
AseI	ATTAAT	1 cut(s)	1065
AspLEI	GCGC	2 cut(s)	1556, 1558
AspS9I	GGNCC	1 cut(s)	1440
AsuC2I	CCSGG	1 cut(s)	1438
AsuHPI	GGTGA	5 cut(s)	120, 421, 545, 1214, 1663
BalI	TGGCCA	1 cut(s)	319
BanII	GRGCYC	1 cut(s)	983
Bbv12I	GWGCWC	1 cut(s)	983
BbvCI	CCTCAGC	1 cut(s)	1596
BbvI	GCAGC	6 cut(s)	545, 1028, 1314, 1468, 1717, 1729
BccI	CCATC	3 cut(s)	491, 659, 1445
BcgI	CGANNNNNNTGC	2 cut(s)	1594, 1628
BciT130I	CCWGG	3 cut(s)	18, 1551, 1665
BciVI	GTATCC	1 cut(s)	705
BcnI	CCSGG	1 cut(s)	1438
BcoDI	GTCTC	3 cut(s)	612, 1438, 1516
BfaI	CTAG	4 cut(s)	296, 1106, 1485, 1527
BfuI	GTATCC	1 cut(s)	705
BisI	GCNGC	6 cut(s)	534, 1017, 1328, 1482, 1718, 1731
BlsI	GCNGC	6 cut(s)	535, 1018, 1329, 1483, 1719, 1732
Bme1390I	CCNGG	4 cut(s)	18, 1438, 1551, 1665
BmgT120I	GGNCC	1 cut(s)	1440
BmiI	GGNNCC	2 cut(s)	1441, 1602
BmrFI	CCNGG	4 cut(s)	18, 1438, 1551, 1665
BmsI	GCATC	3 cut(s)	358, 1045, 1195
BpmI	CTGGAG	4 cut(s)	555, 709, 1323, 1647
Bpu10I	CCTNAGC	2 cut(s)	1596, 1657
BpuEI	CTTGAG	2 cut(s)	88, 1368
BpuMI	CCSGG	1 cut(s)	1438
BsaI	GGTCTC	1 cut(s)	1516
BsaJI	CCNNGG	5 cut(s)	702, 914, 963, 1437, 1664
BsaWI	WCCGGW	2 cut(s)	130, 287
Bsc4I	CCNNNNNNNGG	3 cut(s)	708, 841, 1712
Bse118I	RCCGGY	1 cut(s)	1591
Bse1I	ACTGG	5 cut(s)	320, 572, 726, 1306, 1610
Bse3DI	GCAATG	1 cut(s)	1375
BseAI	TCCGGA	1 cut(s)	287
BseBI	CCWGG	3 cut(s)	18, 1551, 1665
BseDI	CCNNGG	5 cut(s)	702, 914, 963, 1437, 1664
BseGI	GGATG	1 cut(s)	373
BseLI	CCNNNNNNNGG	3 cut(s)	708, 841, 1712
BseMI	GCAATG	1 cut(s)	1375
BseMII	CTCAG	3 cut(s)	204, 447, 1587
BseNI	ACTGG	5 cut(s)	320, 572, 726, 1306, 1610
BsePI	GCGCGC	1 cut(s)	1554
BseRI	GAGGAG	1 cut(s)	1566
BseXI	GCAGC	6 cut(s)	545, 1028, 1314, 1468, 1717, 1729
BseYI	CCCAGC	2 cut(s)	882, 929
Bsh1236I	CGCG	1 cut(s)	1556
BshFI	GGCC	3 cut(s)	319, 1268, 1442
BsiHKAI	GWGCWC	1 cut(s)	983
BsiSI	CCGG	4 cut(s)	131, 288, 1437, 1592
BslFI	GGGAC	2 cut(s)	946, 1406
BslI	CCNNNNNNNGG	3 cut(s)	708, 841, 1712
BsmAI	GTCTC	3 cut(s)	612, 1438, 1516
BsmFI	GGGAC	2 cut(s)	946, 1406
BsnI	GGCC	3 cut(s)	319, 1268, 1442
Bso31I	GGTCTC	1 cut(s)	1516
Bsp1286I	GDGCHC	1 cut(s)	983
Bsp13I	TCCGGA	1 cut(s)	287
Bsp1407I	TGTACA	2 cut(s)	894, 903
Bsp143I	GATC	9 cut(s)	245, 445, 849, 1185, 1339, 1405, 1419, 1668, 1679
BspACI	CCGC	2 cut(s)	1547, 1653
BspANI	GGCC	3 cut(s)	319, 1268, 1442
BspCNI	CTCAG	3 cut(s)	205, 448, 1588
BspEI	TCCGGA	1 cut(s)	287
BspFNI	CGCG	1 cut(s)	1556
BspHI	TCATGA	2 cut(s)	373, 1113
BspLI	GGNNCC	2 cut(s)	1441, 1602
BspPI	GGATC	5 cut(s)	253, 440, 1400, 1676, 1687
BspTNI	GGTCTC	1 cut(s)	1516
BsrDI	GCAATG	1 cut(s)	1375
BsrFI	RCCGGY	1 cut(s)	1591
BsrGI	TGTACA	2 cut(s)	894, 903
BsrI	ACTGG	5 cut(s)	320, 572, 726, 1306, 1610
BssAI	RCCGGY	1 cut(s)	1591
BssECI	CCNNGG	5 cut(s)	702, 914, 963, 1437, 1664
BssHII	GCGCGC	1 cut(s)	1554
BssMI	GATC	9 cut(s)	245, 445, 849, 1185, 1339, 1405, 1419, 1668, 1679
BssT1I	CCWWGG	3 cut(s)	702, 914, 963
Bst2UI	CCWGG	3 cut(s)	18, 1551, 1665
Bst4CI	ACNGT	8 cut(s)	152, 440, 493, 757, 1362, 1414, 1567, 1687
Bst6I	CTCTTC	1 cut(s)	1227
BstAPI	GCANNNNNTGC	1 cut(s)	1025
BstAUI	TGTACA	2 cut(s)	894, 903
BstC8I	GCNNGC	3 cut(s)	1332, 1556, 1735
BstDEI	CTNAG	7 cut(s)	183, 213, 456, 557, 1596, 1657, 1722
BstF5I	GGATG	1 cut(s)	373
BstFNI	CGCG	1 cut(s)	1556
BstHHI	GCGC	2 cut(s)	1556, 1558
BstKTI	GATC	9 cut(s)	248, 448, 852, 1188, 1342, 1408, 1422, 1671, 1682
BstMAI	GTCTC	3 cut(s)	612, 1438, 1516
BstMBI	GATC	9 cut(s)	245, 445, 849, 1185, 1339, 1405, 1419, 1668, 1679
BstMWI	GCNNNNNNNGC	5 cut(s)	377, 583, 1025, 1546, 1555
BstNI	CCWGG	3 cut(s)	18, 1551, 1665
BstNSI	RCATGY	2 cut(s)	1334, 1737
BstSCI	CCNGG	4 cut(s)	16, 1436, 1549, 1663
BstUI	CGCG	1 cut(s)	1556
BstV1I	GCAGC	6 cut(s)	545, 1028, 1314, 1468, 1717, 1729
BstX2I	RGATCY	1 cut(s)	245
BstXI	CCANNNNNNTGG	2 cut(s)	24, 1252
BstYI	RGATCY	1 cut(s)	245
BsuI	GTATCC	1 cut(s)	705
BsuRI	GGCC	3 cut(s)	319, 1268, 1442
BtsCI	GGATG	1 cut(s)	373
BtsIMutI	CAGTG	4 cut(s)	489, 579, 1299, 1617
Cac8I	GCNNGC	3 cut(s)	1332, 1556, 1735
CaiI	CAGNNNCTG	1 cut(s)	892
CciI	TCATGA	2 cut(s)	373, 1113
CfoI	GCGC	2 cut(s)	1556, 1558
Cfr10I	RCCGGY	1 cut(s)	1591
Cfr13I	GGNCC	1 cut(s)	1440
CseI	GACGC	1 cut(s)	387
Csp6I	GTAC	4 cut(s)	633, 677, 895, 904
CviAII	CATG	7 cut(s)	374, 840, 1114, 1331, 1389, 1534, 1734
CviQI	GTAC	4 cut(s)	633, 677, 895, 904
DdeI	CTNAG	7 cut(s)	183, 213, 456, 557, 1596, 1657, 1722
DpnI	GATC	9 cut(s)	247, 447, 851, 1187, 1341, 1407, 1421, 1670, 1681
DpnII	GATC	9 cut(s)	245, 445, 849, 1185, 1339, 1405, 1419, 1668, 1679
EaeI	YGGCCR	1 cut(s)	317
Eam1104I	CTCTTC	1 cut(s)	1227
EarI	CTCTTC	1 cut(s)	1227
EciI	GGCGGA	2 cut(s)	1536, 1642
Ecl136II	GAGCTC	1 cut(s)	981
Eco130I	CCWWGG	3 cut(s)	702, 914, 963
Eco147I	AGGCCT	1 cut(s)	1268
Eco24I	GRGCYC	1 cut(s)	983
Eco31I	GGTCTC	1 cut(s)	1516
Eco53kI	GAGCTC	1 cut(s)	981
Eco57I	CTGAAG	1 cut(s)	1208
EcoICRI	GAGCTC	1 cut(s)	981
EcoRI	GAATTC	1 cut(s)	291
EcoRII	CCWGG	3 cut(s)	16, 1549, 1663
EcoT14I	CCWWGG	3 cut(s)	702, 914, 963
EcoT22I	ATGCAT	1 cut(s)	1336
EcoT38I	GRGCYC	1 cut(s)	983
ErhI	CCWWGG	3 cut(s)	702, 914, 963
FaeI	CATG	7 cut(s)	377, 843, 1117, 1334, 1392, 1537, 1737
FalI	AAGNNNNNCTT	2 cut(s)	176, 208
FaqI	GGGAC	2 cut(s)	946, 1406
FatI	CATG	7 cut(s)	373, 839, 1113, 1330, 1388, 1533, 1733
FauNDI	CATATG	1 cut(s)	314
Fnu4HI	GCNGC	6 cut(s)	534, 1017, 1328, 1482, 1718, 1731
FokI	GGATG	1 cut(s)	380
FriOI	GRGCYC	1 cut(s)	983
Fsp4HI	GCNGC	6 cut(s)	534, 1017, 1328, 1482, 1718, 1731
FspBI	CTAG	4 cut(s)	296, 1106, 1485, 1527
GlaI	GCGC	2 cut(s)	1555, 1557
GluI	GCNGC	6 cut(s)	534, 1017, 1328, 1482, 1718, 1731
GsaI	CCCAGC	2 cut(s)	886, 933
GsuI	CTGGAG	4 cut(s)	555, 709, 1323, 1647
HaeIII	GGCC	3 cut(s)	319, 1268, 1442
HapII	CCGG	4 cut(s)	131, 288, 1437, 1592
HgaI	GACGC	1 cut(s)	387
HhaI	GCGC	2 cut(s)	1556, 1558
Hin1II	CATG	7 cut(s)	377, 843, 1117, 1334, 1392, 1537, 1737
Hin6I	GCGC	2 cut(s)	1554, 1556
HinP1I	GCGC	2 cut(s)	1554, 1556
HincII	GTYRAC	1 cut(s)	1563
HindII	GTYRAC	1 cut(s)	1563
HinfI	GANTC	6 cut(s)	259, 802, 889, 910, 1117, 1606
HpaI	GTTAAC	1 cut(s)	1563
HpaII	CCGG	4 cut(s)	131, 288, 1437, 1592
HphI	GGTGA	5 cut(s)	120, 421, 545, 1214, 1663
Hpy166II	GTNNAC	4 cut(s)	1125, 1172, 1180, 1563
Hpy188I	TCNGA	8 cut(s)	403, 511, 519, 777, 952, 1098, 1405, 1605
Hpy8I	GTNNAC	4 cut(s)	1125, 1172, 1180, 1563
HpyAV	CCTTC	4 cut(s)	99, 234, 1286, 1659
HpyCH4III	ACNGT	8 cut(s)	152, 440, 493, 757, 1362, 1414, 1567, 1687
HpyCH4V	TGCA	7 cut(s)	577, 1016, 1028, 1058, 1330, 1334, 1733
HpyF10VI	GCNNNNNNNGC	5 cut(s)	377, 583, 1025, 1546, 1555
HpyF3I	CTNAG	7 cut(s)	183, 213, 456, 557, 1596, 1657, 1722
Hsp92II	CATG	7 cut(s)	377, 843, 1117, 1334, 1392, 1537, 1737
HspAI	GCGC	2 cut(s)	1554, 1556
Kpn2I	TCCGGA	1 cut(s)	287
KspAI	GTTAAC	1 cut(s)	1563
Kzo9I	GATC	9 cut(s)	245, 445, 849, 1185, 1339, 1405, 1419, 1668, 1679
LmnI	GCTCC	7 cut(s)	574, 608, 728, 978, 1304, 1606, 1666
Lsp1109I	GCAGC	6 cut(s)	545, 1028, 1314, 1468, 1717, 1729
LweI	GCATC	3 cut(s)	358, 1045, 1195
MaeI	CTAG	4 cut(s)	296, 1106, 1485, 1527
MaeIII	GTNAC	3 cut(s)	322, 1048, 1318
MalI	GATC	9 cut(s)	247, 447, 851, 1187, 1341, 1407, 1421, 1670, 1681
MboI	GATC	9 cut(s)	245, 445, 849, 1185, 1339, 1405, 1419, 1668, 1679
MboII	GAAGA	7 cut(s)	40, 43, 674, 1202, 1214, 1334, 1390
MfeI	CAATTG	1 cut(s)	1583
MflI	RGATCY	1 cut(s)	245
MhlI	GDGCHC	1 cut(s)	983
MlsI	TGGCCA	1 cut(s)	319
MluCI	AATT	9 cut(s)	4, 115, 291, 334, 433, 1148, 1246, 1423, 1583
MluNI	TGGCCA	1 cut(s)	319
MlyI	GAGTC	1 cut(s)	883
MmeI	TCCRAC	1 cut(s)	1433
MnlI	CCTC	7 cut(s)	127, 295, 1150, 1279, 1587, 1591, 1716
Mox20I	TGGCCA	1 cut(s)	319
Mph1103I	ATGCAT	1 cut(s)	1336
MroI	TCCGGA	1 cut(s)	287
MscI	TGGCCA	1 cut(s)	319
MseI	TTAA	8 cut(s)	156, 254, 782, 1043, 1065, 1152, 1212, 1562
Msp20I	TGGCCA	1 cut(s)	319
MspA1I	CMGCKG	1 cut(s)	1481
MspI	CCGG	4 cut(s)	131, 288, 1437, 1592
MspR9I	CCNGG	4 cut(s)	18, 1438, 1551, 1665
MunI	CAATTG	1 cut(s)	1583
MvaI	CCWGG	3 cut(s)	18, 1551, 1665
MvnI	CGCG	1 cut(s)	1556
MwoI	GCNNNNNNNGC	5 cut(s)	377, 583, 1025, 1546, 1555
NciI	CCSGG	1 cut(s)	1438
NdeI	CATATG	1 cut(s)	314
NdeII	GATC	9 cut(s)	245, 445, 849, 1185, 1339, 1405, 1419, 1668, 1679
NlaIII	CATG	7 cut(s)	377, 843, 1117, 1334, 1392, 1537, 1737
NlaIV	GGNNCC	2 cut(s)	1441, 1602
NmuCI	GTSAC	1 cut(s)	322
NsiI	ATGCAT	1 cut(s)	1336
NspI	RCATGY	2 cut(s)	1334, 1737
PaeI	GCATGC	2 cut(s)	1334, 1737
PagI	TCATGA	2 cut(s)	373, 1113
PauI	GCGCGC	1 cut(s)	1554
PceI	AGGCCT	1 cut(s)	1268
PfeI	GAWTC	5 cut(s)	259, 802, 910, 1117, 1606
PkrI	GCNGC	6 cut(s)	535, 1018, 1329, 1483, 1719, 1732
PleI	GAGTC	1 cut(s)	883
PpsI	GAGTC	1 cut(s)	883
PshBI	ATTAAT	1 cut(s)	1065
PsiI	TTATAA	1 cut(s)	1515
Psp124BI	GAGCTC	1 cut(s)	983
Psp6I	CCWGG	3 cut(s)	16, 1549, 1663
PspFI	CCCAGC	2 cut(s)	882, 929
PspGI	CCWGG	3 cut(s)	16, 1549, 1663
PspN4I	GGNNCC	2 cut(s)	1441, 1602
PspPI	GGNCC	1 cut(s)	1440
PstNI	CAGNNNCTG	1 cut(s)	892
PsuI	RGATCY	1 cut(s)	245
PteI	GCGCGC	1 cut(s)	1554
PvuII	CAGCTG	1 cut(s)	1481
RsaI	GTAC	4 cut(s)	634, 678, 896, 905
RsaNI	GTAC	4 cut(s)	633, 677, 895, 904
SacI	GAGCTC	1 cut(s)	983
SaqAI	TTAA	8 cut(s)	156, 254, 782, 1043, 1065, 1152, 1212, 1562
SatI	GCNGC	6 cut(s)	534, 1017, 1328, 1482, 1718, 1731
Sau3AI	GATC	9 cut(s)	245, 445, 849, 1185, 1339, 1405, 1419, 1668, 1679
Sau96I	GGNCC	1 cut(s)	1440
SchI	GAGTC	1 cut(s)	883
ScrFI	CCNGG	4 cut(s)	18, 1438, 1551, 1665
SduI	GDGCHC	1 cut(s)	983
SfaNI	GCATC	3 cut(s)	358, 1045, 1195
SmlI	CTYRAG	2 cut(s)	67, 1383
SmoI	CTYRAG	2 cut(s)	67, 1383
SphI	GCATGC	2 cut(s)	1334, 1737
Sse9I	AATT	9 cut(s)	4, 115, 291, 334, 433, 1148, 1246, 1423, 1583
SseBI	AGGCCT	1 cut(s)	1268
SsiI	CCGC	2 cut(s)	1547, 1653
SspI	AATATT	1 cut(s)	34
SspMI	CTAG	4 cut(s)	296, 1106, 1485, 1527
SstI	GAGCTC	1 cut(s)	983
StuI	AGGCCT	1 cut(s)	1268
StyD4I	CCNGG	4 cut(s)	16, 1436, 1549, 1663
StyI	CCWWGG	3 cut(s)	702, 914, 963
TaaI	ACNGT	8 cut(s)	152, 440, 493, 757, 1362, 1414, 1567, 1687
TaqI	TCGA	5 cut(s)	599, 681, 1188, 1356, 1682
TasI	AATT	9 cut(s)	4, 115, 291, 334, 433, 1148, 1246, 1423, 1583
TatI	WGTACW	4 cut(s)	632, 676, 894, 903
TfiI	GAWTC	5 cut(s)	259, 802, 910, 1117, 1606
Tru1I	TTAA	8 cut(s)	156, 254, 782, 1043, 1065, 1152, 1212, 1562
Tru9I	TTAA	8 cut(s)	156, 254, 782, 1043, 1065, 1152, 1212, 1562
TscAI	CASTG	4 cut(s)	496, 579, 1306, 1617
TseFI	GTSAC	1 cut(s)	322
TseI	GCWGC	6 cut(s)	533, 1016, 1327, 1481, 1717, 1730
Tsp45I	GTSAC	1 cut(s)	322
TspRI	CASTG	4 cut(s)	496, 579, 1306, 1617
VspI	ATTAAT	1 cut(s)	1065
XapI	RAATTY	3 cut(s)	4, 291, 1148
XceI	RCATGY	2 cut(s)	1334, 1737
XcmI	CCANNNNNNNNNTGG	1 cut(s)	21
XspI	CTAG	4 cut(s)	296, 1106, 1485, 1527
Zsp2I	ATGCAT	1 cut(s)	1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.