FvH4_4g26262

UBA-like domain (DUF1421)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0004149
Physical Location & Seq
Forward (+)
27733123 .. 27737413
4291 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g26262.t1

Sequence Viewer

Length: 1992 bp
ATGTGTCCAACAAATTGTCAAGTCGTAGTCGTAGTATTGAATGTGTCTTCATTGATTATAGCCCTCATCATAAAGGCTACAAAGGCCAAATCTGCAAAACGCGTAGACGTTTCTCGAAACCCCAAAGTCAAAAGCCCTATTCTTTCTTCCGACGCCGCCCTGATCTCCGCCTCTCTCATCTCTTTCAGATTAGCTTGGAGTAGACTTACAGATTTGGGCTGGACTTTGGTGTCTATAGCTGTGATCTTTCTGGATAAGATATCACTAGTTCTGTTCAGCCAGCACATTGTATTGATTACTACACCGATGAATACTACATCCTTCATGGACAAGCAGATAATGGACCTGTCACATGGATCGTCACAGAACAACAACGACTTCCTTGACCTGATGAACAATTCCCAAGAGGAAGAGCACCAGGTGGGCCGTGGAAATGGGCTTACCAAGAAGGAAGAGATCTTGCCCAACTATGATTTCCATCCCATCCGTCCCATCACTGGAGTCTCCTCGCACTCCCAAAATTTTGATGCTACACCTAATCTTGGAGGTGGAGGAGTATCCACTATGTCCAACTCCAACACCAATGCTCCTGTCAGAAATTATGGTTCTGTGGATTCCCTTAAACCAGCAAAAGATATTGTGGAGAAGGACCGAAATGCTCCTGATGCTACAGTTATATCAGAGATTGACCAGACCATGAAGAAGTATGCTGATAATTTACTTCAAGTTATGGAAGGTATTAGTGCACGACTAACACAACTTGAGAGCAGAACCTGCCACCTTGAGAATTCTGTGGATGATTTGAAGGTATCTGTGGGAAACAATCATGGAAATGCTGATGGAAAGATGAGACAATTGGAGAATATCCTTAGAGATGTGCAAACAGGTGTTCAGGATTTGAAGGATAAGCAATCAATAGTAGAGGCTCAGCTGCAGCTTGGGAAGATACAGATTTCCAATCCCAAGGTAGATCCTCAATTGGAATCTCGGAATGCTTTGAATGTGGATTCTGGGCAGACAGTAGCCACTGCTCCTCAACAATCTTACCAACAGCTTCCTGCTGTGAACGTTCCACCATCATTTCCTGCTGTCTCTCCACCAAATGCTCCTCCACCGCCTACGCTTCAAAGCGTACCACCTTCAATTCAGCATCCAAATCAGTACTCCCAGAGTCAGATCCCTCCTGTTCCTCAGCGAGACCCCTATTTCCCAGCTGCACCTGGTCAAACTCAAGAAACTCCAAATCAGCAATACCAATTACCTGCAGGTCAGCAGTCACTCCCGCCTCCTACGGTACCTCCACATCAACAATTTCAGCCTACCAGTCAACCACAGTATCCTCAGCCACCGCCCCAGCTTCCTCAACAGCACCATTCACTTCCACCTGTTAATCACTCTCAAGTCCAGCCTACCCTAGGCCACCATGCTGAAGAAACTCCTTATGCTCCTTCCCAGACTTACCCACCCAGTCTTCGCCAGCCACCTTCTCAGACACCTACTGGGCTCCCTCCCTCCCAACAATACTATAATCCAACATCCAATGTATATGAACCACCATCTAGCAGACCTAATTCAGGGTTTTCCTCTGGGTATGGCCCTCCATCTGGGCTTAATGAACCATATCATTATGGTGGATCACCTTCACAATATGGTGGTACCTCCTCAATGAAGCCACAACTCTCATCTGCTACTTCTCAAAGTCAAAGTGGAGGAAGTGGTTACCCACAGCTCCCAACAGCTAGGGTATTACCACATGCAGTGCCTACCCCCTCTGGTGTAAGTGATCGATCAGGTTCTGCTGGGACTGGAAACAAGGTTCCTATTGATGATGTCATTGACAGAGTGACAAGCATGGGCTTCCCAAGAGACCATGTGAGGGCGACAGTTCGGAAGCTAACAGACAATGGTCAGGCGGTTGACCTGAATGTGGTGCTGGATAAGCTGATGAATGATGGGGATGTCCAGCCACCTAGAGGTTGGTTTGGTCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00380 ko01100 map00380 map01100
Pfam Domains
Protein Families
DUF1421

Protein Analysis

664

Amino Acids

71.73

Weight (kDa)

6.5

Isoelectric Point (pI)

55.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1421 PF07223 608 - 651 4.6e-20 UBA-like domain (DUF1421)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 229
Acc36I ACCTGC 3 cut(s) 782, 1256, 1270
Acc65I GGTACC 2 cut(s) 1294, 1655
AccB1I GGYRCC 2 cut(s) 1294, 1655
AccI GTMKAC 2 cut(s) 105, 202
AccII CGCG 1 cut(s) 102
AciI CCGC 6 cut(s) 156, 168, 1115, 1283, 1349, 1913
AclI AACGTT 1 cut(s) 1068
AclWI GGATC 4 cut(s) 364, 965, 1171, 1642
AcsI RAATTY 2 cut(s) 520, 787
AcuI CTGAAG 1 cut(s) 1449
AcyI GRCGYC 1 cut(s) 153
AdeI CACNNNGTG 1 cut(s) 421
AfaI GTAC 4 cut(s) 1134, 1163, 1296, 1657
AfiI CCNNNNNNNGG 8 cut(s) 497, 542, 1415, 1574, 1604, 1876, 1927, 1973
AflIII ACRYGT 1 cut(s) 100
AgsI TTSAA 7 cut(s) 40, 725, 805, 901, 1000, 1127, 1143
AhlI ACTAGT 1 cut(s) 265
AjnI CCWGG 2 cut(s) 417, 1219
AjuI GAANNNNNNNTTGG 2 cut(s) 458, 490
AloI GAACNNNNNNTCC 2 cut(s) 1800, 1832
Alw21I GWGCWC 2 cut(s) 417, 748
Alw26I GTCTC 5 cut(s) 508, 844, 1096, 1191, 1860
Alw44I GTGCAC 1 cut(s) 744
AlwI GGATC 4 cut(s) 364, 965, 1171, 1642
AlwNI CAGNNNCTG 2 cut(s) 774, 1796
AoxI GGCC 4 cut(s) 84, 424, 1417, 1594
ApaLI GTGCAC 1 cut(s) 744
ApeKI GCWGC 3 cut(s) 931, 934, 1214
ApoI RAATTY 2 cut(s) 520, 787
Asp718I GGTACC 2 cut(s) 1294, 1655
AspA2I CCTAGG 1 cut(s) 1414
AspS9I GGNCC 4 cut(s) 343, 424, 649, 1595
AsuHPI GGTGA 1 cut(s) 1629
AvaII GGWCC 2 cut(s) 343, 649
AvrII CCTAGG 1 cut(s) 1414
BaeGI GKGCMC 1 cut(s) 748
BaeI ACNNNNGTAYC 2 cut(s) 1319, 1352
BanI GGYRCC 2 cut(s) 1294, 1655
BanII GRGCYC 1 cut(s) 1506
BbsI GAAGAC 2 cut(s) 39, 1463
Bbv12I GWGCWC 2 cut(s) 417, 748
BbvCI CCTCAGC 2 cut(s) 1191, 1341
BbvI GCAGC 3 cut(s) 918, 946, 1201
BccI CCATC 8 cut(s) 486, 491, 500, 833, 1084, 1564, 1609, 1946
BceAI ACGGC 1 cut(s) 411
BciT130I CCWGG 2 cut(s) 419, 1221
BciVI GTATCC 2 cut(s) 568, 1347
BcoDI GTCTC 5 cut(s) 508, 844, 1096, 1191, 1860
BcuI ACTAGT 1 cut(s) 265
BfaI CTAG 5 cut(s) 266, 1415, 1560, 1740, 1971
BfmI CTRYAG 4 cut(s) 234, 669, 932, 1263
BfuAI ACCTGC 3 cut(s) 782, 1256, 1270
BfuI GTATCC 2 cut(s) 568, 1347
BglII AGATCT 1 cut(s) 456
BisI GCNGC 4 cut(s) 156, 932, 935, 1215
BlnI CCTAGG 1 cut(s) 1414
BlpI GCTNAGC 1 cut(s) 927
BlsI GCNGC 4 cut(s) 157, 933, 936, 1216
BmcAI AGTACT 1 cut(s) 1163
Bme1390I CCNGG 2 cut(s) 419, 1221
Bme18I GGWCC 2 cut(s) 343, 649
BmgT120I GGNCC 4 cut(s) 343, 424, 649, 1595
BmiI GGNNCC 4 cut(s) 1296, 1505, 1657, 1818
BmrFI CCNGG 2 cut(s) 419, 1221
BmrI ACTGGG 2 cut(s) 1461, 1509
BmsI GCATC 3 cut(s) 517, 655, 1159
BmuI ACTGGG 2 cut(s) 1461, 1509
BoxI GACNNNNGTC 1 cut(s) 1905
BpiI GAAGAC 2 cut(s) 39, 1463
BpmI CTGGAG 1 cut(s) 519
Bpu10I CCTNAGC 2 cut(s) 1191, 1341
Bpu1102I GCTNAGC 1 cut(s) 927
BpuEI CTTGAG 4 cut(s) 782, 803, 1215, 1383
Bsa29I ATCGAT 1 cut(s) 1786
BsaBI GATNNNNATC 1 cut(s) 477
BsaHI GRCGYC 1 cut(s) 153
BsaI GGTCTC 2 cut(s) 1191, 1860
BsaJI CCNNGG 3 cut(s) 427, 963, 1414
BsaXI ACNNNNNCTCC 4 cut(s) 571, 601, 1282, 1312
Bsc4I CCNNNNNNNGG 8 cut(s) 497, 542, 1415, 1574, 1604, 1876, 1927, 1973
Bse1I ACTGG 5 cut(s) 502, 1323, 1467, 1504, 1810
Bse8I GATNNNNATC 1 cut(s) 477
BseBI CCWGG 2 cut(s) 419, 1221
BseCI ATCGAT 1 cut(s) 1786
BseDI CCNNGG 3 cut(s) 427, 963, 1414
BseGI GGATG 7 cut(s) 317, 478, 483, 802, 1150, 1535, 1963
BseJI GATNNNNATC 1 cut(s) 477
BseLI CCNNNNNNNGG 8 cut(s) 497, 542, 1415, 1574, 1604, 1876, 1927, 1973
BseMII CTCAG 4 cut(s) 941, 1205, 1355, 1502
BseNI ACTGG 5 cut(s) 502, 1323, 1467, 1504, 1810
BseRI GAGGAG 5 cut(s) 496, 567, 1023, 1098, 1651
BseSI GKGCMC 1 cut(s) 748
BseXI GCAGC 3 cut(s) 918, 946, 1201
BseYI CCCAGC 3 cut(s) 1210, 1353, 1799
BsgI GTGCAG 1 cut(s) 1200
Bsh1236I CGCG 1 cut(s) 102
BshFI GGCC 4 cut(s) 86, 426, 1419, 1596
BshNI GGYRCC 2 cut(s) 1294, 1655
BshVI ATCGAT 1 cut(s) 1786
BsiHKAI GWGCWC 2 cut(s) 417, 748
BslFI GGGAC 2 cut(s) 474, 1816
BslI CCNNNNNNNGG 8 cut(s) 497, 542, 1415, 1574, 1604, 1876, 1927, 1973
BsmAI GTCTC 5 cut(s) 508, 844, 1096, 1191, 1860
BsmFI GGGAC 2 cut(s) 474, 1816
BsmI GAATGC 1 cut(s) 997
BsnI GGCC 4 cut(s) 86, 426, 1419, 1596
Bso31I GGTCTC 2 cut(s) 1191, 1860
Bsp1286I GDGCHC 3 cut(s) 417, 748, 1506
Bsp143I GATC 9 cut(s) 162, 243, 356, 456, 970, 1176, 1634, 1783, 1787
Bsp1720I GCTNAGC 1 cut(s) 927
BspACI CCGC 6 cut(s) 156, 168, 1115, 1283, 1349, 1913
BspANI GGCC 4 cut(s) 86, 426, 1419, 1596
BspCNI CTCAG 4 cut(s) 940, 1204, 1354, 1501
BspDI ATCGAT 1 cut(s) 1786
BspFNI CGCG 1 cut(s) 102
BspLI GGNNCC 4 cut(s) 1296, 1505, 1657, 1818
BspMAI CTGCAG 2 cut(s) 936, 1267
BspMI ACCTGC 3 cut(s) 782, 1256, 1270
BspPI GGATC 4 cut(s) 364, 965, 1171, 1642
BspQI GCTCTTC 1 cut(s) 405
BspT107I GGYRCC 2 cut(s) 1294, 1655
BspTNI GGTCTC 2 cut(s) 1191, 1860
BsrI ACTGG 5 cut(s) 502, 1323, 1467, 1504, 1810
BssECI CCNNGG 3 cut(s) 427, 963, 1414
BssMI GATC 9 cut(s) 162, 243, 356, 456, 970, 1176, 1634, 1783, 1787
BssNI GRCGYC 1 cut(s) 153
BssT1I CCWWGG 2 cut(s) 963, 1414
Bst2UI CCWGG 2 cut(s) 419, 1221
Bst4CI ACNGT 5 cut(s) 673, 1021, 1294, 1335, 1885
Bst6I CTCTTC 2 cut(s) 405, 447
BstACI GRCGYC 1 cut(s) 153
BstAPI GCANNNNNTGC 1 cut(s) 774
BstC8I GCNNGC 2 cut(s) 281, 1478
BstDEI CTNAG 5 cut(s) 869, 927, 1191, 1341, 1488
BstDSI CCRYGG 1 cut(s) 427
BstEII GGTNACC 1 cut(s) 1718
BstENI CCTNNNNNAGG 2 cut(s) 1413, 1572
BstF5I GGATG 7 cut(s) 317, 478, 483, 802, 1150, 1535, 1963
BstFNI CGCG 1 cut(s) 102
BstKTI GATC 9 cut(s) 165, 246, 359, 459, 973, 1179, 1637, 1786, 1790
BstMAI GTCTC 5 cut(s) 508, 844, 1096, 1191, 1860
BstMBI GATC 9 cut(s) 162, 243, 356, 456, 970, 1176, 1634, 1783, 1787
BstMWI GCNNNNNNNGC 5 cut(s) 83, 92, 665, 774, 1939
BstNI CCWGG 2 cut(s) 419, 1221
BstNSI RCATGY 1 cut(s) 1757
BstPAI GACNNNNGTC 1 cut(s) 1905
BstPI GGTNACC 1 cut(s) 1718
BstSCI CCNGG 2 cut(s) 417, 1219
BstSFI CTRYAG 4 cut(s) 234, 669, 932, 1263
BstSLI GKGCMC 1 cut(s) 748
BstUI CGCG 1 cut(s) 102
BstV1I GCAGC 3 cut(s) 918, 946, 1201
BstV2I GAAGAC 2 cut(s) 39, 1463
BstX2I RGATCY 3 cut(s) 456, 970, 1176
BstYI RGATCY 3 cut(s) 456, 970, 1176
Bsu15I ATCGAT 1 cut(s) 1786
BsuI GTATCC 2 cut(s) 568, 1347
BsuRI GGCC 4 cut(s) 86, 426, 1419, 1596
BsuTUI ATCGAT 1 cut(s) 1786
BtgI CCRYGG 1 cut(s) 427
BtsCI GGATG 7 cut(s) 317, 478, 483, 802, 1150, 1535, 1963
BtsI GCAGTG 2 cut(s) 1026, 1764
BtsIMutI CAGTG 3 cut(s) 495, 1026, 1764
BveI ACCTGC 3 cut(s) 782, 1256, 1270
Cac8I GCNNGC 2 cut(s) 281, 1478
CaiI CAGNNNCTG 2 cut(s) 774, 1796
Cfr13I GGNCC 4 cut(s) 343, 424, 649, 1595
ClaI ATCGAT 1 cut(s) 1786
CseI GACGC 1 cut(s) 161
CsiI ACCWGGT 2 cut(s) 417, 1219
Csp6I GTAC 4 cut(s) 1133, 1162, 1295, 1656
CviAII CATG 8 cut(s) 325, 353, 697, 827, 1424, 1754, 1852, 1871
CviQI GTAC 4 cut(s) 1133, 1162, 1295, 1656
DdeI CTNAG 5 cut(s) 869, 927, 1191, 1341, 1488
DpnI GATC 9 cut(s) 164, 245, 358, 458, 972, 1178, 1636, 1785, 1789
DpnII GATC 9 cut(s) 162, 243, 356, 456, 970, 1176, 1634, 1783, 1787
DraIII CACNNNGTG 1 cut(s) 421
DrdI GACNNNNNNGTC 1 cut(s) 229
DseDI GACNNNNNNGTC 1 cut(s) 229
Eam1104I CTCTTC 2 cut(s) 405, 447
EarI CTCTTC 2 cut(s) 405, 447
EciI GGCGGA 1 cut(s) 157
Eco130I CCWWGG 2 cut(s) 963, 1414
Eco24I GRGCYC 1 cut(s) 1506
Eco31I GGTCTC 2 cut(s) 1191, 1860
Eco32I GATATC 1 cut(s) 261
Eco47I GGWCC 2 cut(s) 343, 649
Eco57I CTGAAG 1 cut(s) 1449
Eco91I GGTNACC 1 cut(s) 1718
EcoNI CCTNNNNNAGG 2 cut(s) 1413, 1572
EcoO65I GGTNACC 1 cut(s) 1718
EcoRI GAATTC 1 cut(s) 787
EcoRII CCWGG 2 cut(s) 417, 1219
EcoRV GATATC 1 cut(s) 261
EcoT14I CCWWGG 2 cut(s) 963, 1414
EcoT38I GRGCYC 1 cut(s) 1506
ErhI CCWWGG 2 cut(s) 963, 1414
FaeI CATG 8 cut(s) 328, 356, 700, 830, 1427, 1757, 1855, 1874
FaqI GGGAC 2 cut(s) 474, 1816
FatI CATG 8 cut(s) 324, 352, 696, 826, 1423, 1753, 1851, 1870
FauI CCCGC 1 cut(s) 1290
FblI GTMKAC 2 cut(s) 105, 202
Fnu4HI GCNGC 4 cut(s) 156, 932, 935, 1215
FokI GGATG 7 cut(s) 304, 465, 470, 809, 1137, 1522, 1970
FriOI GRGCYC 1 cut(s) 1506
Fsp4HI GCNGC 4 cut(s) 156, 932, 935, 1215
FspBI CTAG 5 cut(s) 266, 1415, 1560, 1740, 1971
GluI GCNGC 4 cut(s) 156, 932, 935, 1215
GsaI CCCAGC 3 cut(s) 1214, 1357, 1803
GsuI CTGGAG 1 cut(s) 519
HaeIII GGCC 4 cut(s) 86, 426, 1419, 1596
HgaI GACGC 1 cut(s) 161
Hin1I GRCGYC 1 cut(s) 153
Hin1II CATG 8 cut(s) 328, 356, 700, 830, 1427, 1757, 1855, 1874
HincII GTYRAC 2 cut(s) 1328, 1918
HindII GTYRAC 2 cut(s) 1328, 1918
HinfI GANTC 5 cut(s) 501, 614, 983, 1007, 1171
HphI GGTGA 1 cut(s) 1629
Hpy166II GTNNAC 6 cut(s) 106, 203, 746, 1066, 1328, 1918
Hpy188I TCNGA 8 cut(s) 151, 188, 596, 682, 990, 1176, 1491, 1890
Hpy188III TCNNGA 5 cut(s) 114, 251, 662, 893, 1232
Hpy8I GTNNAC 6 cut(s) 106, 203, 746, 1066, 1328, 1918
Hpy99I CGWCG 1 cut(s) 155
HpyCH4III ACNGT 5 cut(s) 673, 1021, 1294, 1335, 1885
HpyCH4IV ACGT 2 cut(s) 108, 1068
HpyCH4V TGCA 7 cut(s) 95, 746, 880, 934, 1217, 1265, 1757
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 92, 665, 774, 1939
HpyF3I CTNAG 5 cut(s) 869, 927, 1191, 1341, 1488
HpySE526I ACGT 2 cut(s) 108, 1068
Hsp92I GRCGYC 1 cut(s) 153
Hsp92II CATG 8 cut(s) 328, 356, 700, 830, 1427, 1757, 1855, 1874
KpnI GGTACC 2 cut(s) 1298, 1659
Kzo9I GATC 9 cut(s) 162, 243, 356, 456, 970, 1176, 1634, 1783, 1787
LguI GCTCTTC 1 cut(s) 405
LmnI GCTCC 7 cut(s) 592, 664, 1036, 1111, 1450, 1509, 1734
Lsp1109I GCAGC 3 cut(s) 918, 946, 1201
LweI GCATC 3 cut(s) 517, 655, 1159
MabI ACCWGGT 2 cut(s) 417, 1219
MaeI CTAG 5 cut(s) 266, 1415, 1560, 1740, 1971
MaeII ACGT 2 cut(s) 108, 1068
MaeIII GTNAC 5 cut(s) 348, 360, 1275, 1718, 1843
MalI GATC 9 cut(s) 164, 245, 358, 458, 972, 1178, 1636, 1785, 1789
MboI GATC 9 cut(s) 162, 243, 356, 456, 970, 1176, 1634, 1783, 1787
MboII GAAGA 8 cut(s) 39, 138, 422, 464, 712, 955, 1442, 1463
MfeI CAATTG 2 cut(s) 854, 977
MflI RGATCY 3 cut(s) 456, 970, 1176
MhlI GDGCHC 3 cut(s) 417, 748, 1506
MluI ACGCGT 1 cut(s) 100
MlyI GAGTC 2 cut(s) 510, 1180
MmeI TCCRAC 5 cut(s) 32, 174, 594, 600, 1556
MseI TTAA 3 cut(s) 621, 1389, 1611
MslI CAYNNNNRTG 2 cut(s) 831, 1629
MspA1I CMGCKG 2 cut(s) 931, 1214
MspR9I CCNGG 2 cut(s) 419, 1221
MunI CAATTG 2 cut(s) 854, 977
Mva1269I GAATGC 1 cut(s) 997
MvaI CCWGG 2 cut(s) 419, 1221
MvnI CGCG 1 cut(s) 102
MwoI GCNNNNNNNGC 5 cut(s) 83, 92, 665, 774, 1939
NdeII GATC 9 cut(s) 162, 243, 356, 456, 970, 1176, 1634, 1783, 1787
NlaIII CATG 8 cut(s) 328, 356, 700, 830, 1427, 1757, 1855, 1874
NlaIV GGNNCC 4 cut(s) 1296, 1505, 1657, 1818
NmuCI GTSAC 4 cut(s) 348, 360, 1275, 1843
NspI RCATGY 1 cut(s) 1757
PciSI GCTCTTC 1 cut(s) 405
PctI GAATGC 1 cut(s) 997
PfeI GAWTC 3 cut(s) 614, 983, 1007
PkrI GCNGC 4 cut(s) 157, 933, 936, 1216
PleI GAGTC 2 cut(s) 509, 1179
PpsI GAGTC 2 cut(s) 509, 1179
PshAI GACNNNNGTC 1 cut(s) 1905
Psp1406I AACGTT 1 cut(s) 1068
Psp6I CCWGG 2 cut(s) 417, 1219
PspEI GGTNACC 1 cut(s) 1718
PspFI CCCAGC 3 cut(s) 1210, 1353, 1799
PspGI CCWGG 2 cut(s) 417, 1219
PspN4I GGNNCC 4 cut(s) 1296, 1505, 1657, 1818
PspPI GGNCC 4 cut(s) 343, 424, 649, 1595
PstI CTGCAG 2 cut(s) 936, 1267
PstNI CAGNNNCTG 2 cut(s) 774, 1796
PsuI RGATCY 3 cut(s) 456, 970, 1176
PvuII CAGCTG 2 cut(s) 931, 1214
RsaI GTAC 4 cut(s) 1134, 1163, 1296, 1657
RsaNI GTAC 4 cut(s) 1133, 1162, 1295, 1656
RseI CAYNNNNRTG 2 cut(s) 831, 1629
SapI GCTCTTC 1 cut(s) 405
SaqAI TTAA 3 cut(s) 621, 1389, 1611
SatI GCNGC 4 cut(s) 156, 932, 935, 1215
Sau3AI GATC 9 cut(s) 162, 243, 356, 456, 970, 1176, 1634, 1783, 1787
Sau96I GGNCC 4 cut(s) 343, 424, 649, 1595
SbfI CCTGCAGG 1 cut(s) 1267
ScaI AGTACT 1 cut(s) 1163
SchI GAGTC 2 cut(s) 510, 1180
ScrFI CCNGG 2 cut(s) 419, 1221
SdaI CCTGCAGG 1 cut(s) 1267
SduI GDGCHC 3 cut(s) 417, 748, 1506
SexAI ACCWGGT 2 cut(s) 417, 1219
SfaNI GCATC 3 cut(s) 517, 655, 1159
SfcI CTRYAG 4 cut(s) 234, 669, 932, 1263
SinI GGWCC 2 cut(s) 343, 649
SmiMI CAYNNNNRTG 2 cut(s) 831, 1629
SmlI CTYRAG 4 cut(s) 761, 782, 1230, 1398
SmoI CTYRAG 4 cut(s) 761, 782, 1230, 1398
SpeI ACTAGT 1 cut(s) 265
Sse8387I CCTGCAGG 1 cut(s) 1267
SsiI CCGC 6 cut(s) 156, 168, 1115, 1283, 1349, 1913
SspMI CTAG 5 cut(s) 266, 1415, 1560, 1740, 1971
StyD4I CCNGG 2 cut(s) 417, 1219
StyI CCWWGG 2 cut(s) 963, 1414
TaaI ACNGT 5 cut(s) 673, 1021, 1294, 1335, 1885
TaiI ACGT 2 cut(s) 111, 1071
TaqI TCGA 2 cut(s) 115, 1786
TaqII GACCGA 1 cut(s) 666
TatI WGTACW 1 cut(s) 1161
TauI GCSGC 1 cut(s) 158
TfiI GAWTC 3 cut(s) 614, 983, 1007
Tru1I TTAA 3 cut(s) 621, 1389, 1611
Tru9I TTAA 3 cut(s) 621, 1389, 1611
TscAI CASTG 3 cut(s) 502, 1033, 1764
TseFI GTSAC 4 cut(s) 348, 360, 1275, 1843
TseI GCWGC 3 cut(s) 931, 934, 1214
Tsp45I GTSAC 4 cut(s) 348, 360, 1275, 1843
TspDTI ATGAA 9 cut(s) 39, 313, 323, 407, 713, 1563, 1629, 1682, 1961
TspGWI ACGGA 1 cut(s) 476
TspRI CASTG 3 cut(s) 502, 1033, 1764
VneI GTGCAC 1 cut(s) 744
VpaK11BI GGWCC 2 cut(s) 343, 649
XagI CCTNNNNNAGG 2 cut(s) 1413, 1572
XapI RAATTY 2 cut(s) 520, 787
XceI RCATGY 1 cut(s) 1757
XcmI CCANNNNNNNNNTGG 2 cut(s) 425, 1974
XmaJI CCTAGG 1 cut(s) 1414
XmiI GTMKAC 2 cut(s) 105, 202
XspI CTAG 5 cut(s) 266, 1415, 1560, 1740, 1971
ZrmI AGTACT 1 cut(s) 1163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.