RLG00000019227

UBA-like domain (DUF1421)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0004149
Physical Location & Seq
Forward (+)
48636334 .. 48641514
5181 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019227

Sequence Viewer

Length: 1851 bp
ATGGAGAGAGATAGAGATAAGAAAGAGGAAGTCAAGAAGAGAAGAAGAAAACTGAAGACGAAGCGCCGCGGAATCAATCTTTCTTCAAGCTTCACCCGCCATTTCTTGCTCAAGATTCTATCGATCAATCCCATTCTATTGATTACGACACCGATGAATACTACATCCTTCATGGACAAGCAGATAATGGACCTGTCACAGGGATCGTCACAGCACAACAACGACTTCCTTGACCTGATGAACAATTCCCAAGAGGAAGAGCACCAGGTGGGTCATGGAAACGGGATTTCCAAGAAGGAAGAGATCTTGCCAAACTATGATTTCCAGCCCATCCGTCCCATCACTGGAGCCTCTTCGCAATCCCCAAGTTTTGATGCTACACCTAATCTCGGAGGTGGAGGAGGATCCACTAGGGCTTGGAACTCCCAAGAGTCCAAGTCCAACACCAATACTCCTATCAGAAATTATGGTTCTGTGGATTCCTTCGAACGTGCAAAAGATGTTGTGGAGAAGGACCGACATGTTCCTGATGCTACAATTATATCAGAGATTGACCACACCATGAAGAAGTATGCTGATAATTTACTTCATGTTATGGAAGGTATTAGTGCACGACTAACACAACTTGAGAGCAGAACCCGCCACCTTGAGAATTCTGTTGATGATTTGAAGGTATCTGTGGGAAACAATCATGGAAATGCTGATGGAAAGATGAGACAAATGGAGAATATTCTTAGAGATGTGCAAACAGGTGTTCAGGATTTGAAGGATAAGCAATCAATAGTAGAGGCTCAGCTGCAGCTTGGGAAGATACAGCTATCAAATCCCAAGGTAGATCCTCAATTGGAATCTCGGAATGCTCTGAATGCAGATTCTGGGCATAAAGTAGCCTCTGCTCCTCAACAATCTCACCAACAGCTTCCTCCTGTGAACATTCCACCATCACTTCCTGCTGTTTCTCCACCAAATGCTCCTCCACAGCCTATGCTCCAAAGTGTACCACCTTCAATTCAGCATCCAAATCAGTACTCTCAGAACCAGATCCCTCCTGTTCCTCAGCGAGACCAATATTTTCCAGCTGCACCTGTTCAAACTCAAGAAGCTCCAAATCAGCAATACCAATTGCCTGCAGGTCAGCAGTCACTCCCCCCTCCTACGGTACCTCCGCATCAACAATTTCAGCCTACCAGTCAACCACAGTATCCTCAGCCACCGCCCCAGCTTCCTCAACAGCACCATTCACTTCCACCTGTTAATCCCTCTCAACTCCAGCCTACCCTAGGTCACCATGCTGAAGATACTCCTTATGTTCCTTCCCAGACCTACCCACCCAGTCTTCGCCAGCCACCTTCTCAGACACCTAGTGGGCCTCCTCCCTCCCAACAATATTATAGTCCAACATCCAATGTATATGAGCCACCATCTAGCAGACCTAATTCAGGGTATTCCTCTGGGTACCCTCCTGGGCTTAATGAACCGTATCATTATGGTGGATCACCTTCTCAATATGGTGGTACCTCCTCGATGAAACCACAACTCTCTTCTGCTACTGCTCAAAGTCAAAGTGGAGGAAGTGGTTACCCACAGCTCCCAACAGCTAGGGTATTACCACATGCAGTGCCTACCGCCTCTGGTGTAAGTGATCGATCAGGTTCAGCTGGGACTGGAAACAAGGTTCCTATTGATGATGTGATTGAAAGAGTGACAAGCATGGGTTTTCCGAGAGACCATGTAAGGGCGACAGTTCGGAAGCTGACAGACAACGGTCAGGCGGTTGACCTGAATGTTGTGTTAGATAAGCTGATGAATGATGGGGATGTCCAGCCACCTAGAGGTTGGTTTGGTCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00380 ko01100 map00380 map01100
Pfam Domains
Protein Families
DUF1421

Protein Analysis

617

Amino Acids

67.61

Weight (kDa)

7.9

Isoelectric Point (pI)

65.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1421 PF07223 561 - 604 3.5e-20 UBA-like domain (DUF1421)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1121
Acc65I GGTACC 3 cut(s) 1159, 1455, 1514
AccB1I GGYRCC 3 cut(s) 1159, 1455, 1514
AccII CGCG 1 cut(s) 69
AciI CCGC 8 cut(s) 67, 69, 97, 640, 1166, 1214, 1626, 1772
AclWI GGATC 6 cut(s) 211, 399, 412, 830, 1036, 1501
AcsI RAATTY 1 cut(s) 652
AcuI CTGAAG 2 cut(s) 74, 1314
AdeI CACNNNGTG 2 cut(s) 268, 1364
AfaI GTAC 5 cut(s) 999, 1028, 1161, 1457, 1516
AfiI CCNNNNNNNGG 8 cut(s) 199, 344, 389, 1156, 1280, 1439, 1735, 1832
AflIII ACRYGT 1 cut(s) 520
AgsI TTSAA 6 cut(s) 87, 670, 766, 1008, 1091, 1697
AjnI CCWGG 2 cut(s) 264, 1462
AloI GAACNNNNNNTCC 2 cut(s) 1659, 1691
Alw21I GWGCWC 2 cut(s) 264, 613
Alw26I GTCTC 3 cut(s) 709, 1056, 1719
Alw44I GTGCAC 1 cut(s) 609
AlwI GGATC 6 cut(s) 211, 399, 412, 830, 1036, 1501
AlwNI CAGNNNCTG 1 cut(s) 875
AoxI GGCC 1 cut(s) 1367
ApaLI GTGCAC 1 cut(s) 609
ApeKI GCWGC 3 cut(s) 796, 799, 1079
ApoI RAATTY 1 cut(s) 652
Asp718I GGTACC 3 cut(s) 1159, 1455, 1514
AspA2I CCTAGG 1 cut(s) 1279
AspLEI GCGC 1 cut(s) 66
AspS9I GGNCC 3 cut(s) 190, 514, 1367
AsuHPI GGTGA 4 cut(s) 85, 902, 1277, 1488
AsuII TTCGAA 1 cut(s) 486
AvaII GGWCC 2 cut(s) 190, 514
AvrII CCTAGG 1 cut(s) 1279
BaeGI GKGCMC 1 cut(s) 613
BaeI ACNNNNGTAYC 2 cut(s) 1184, 1217
BamHI GGATCC 1 cut(s) 404
BanI GGYRCC 3 cut(s) 1159, 1455, 1514
BbsI GAAGAC 2 cut(s) 62, 1328
Bbv12I GWGCWC 2 cut(s) 264, 613
BbvCI CCTCAGC 2 cut(s) 1056, 1206
BbvI GCAGC 3 cut(s) 783, 811, 1066
BccI CCATC 6 cut(s) 338, 347, 698, 949, 1429, 1805
BciT130I CCWGG 2 cut(s) 266, 1464
BciVI GTATCC 1 cut(s) 1212
BcoDI GTCTC 3 cut(s) 709, 1056, 1719
BfaI CTAG 6 cut(s) 411, 1280, 1362, 1425, 1599, 1830
BfmI CTRYAG 2 cut(s) 797, 1128
BfoI RGCGCY 1 cut(s) 67
BfuAI ACCTGC 1 cut(s) 1121
BfuI GTATCC 1 cut(s) 1212
BglII AGATCT 1 cut(s) 303
BisI GCNGC 4 cut(s) 67, 797, 800, 1080
BlnI CCTAGG 1 cut(s) 1279
BlpI GCTNAGC 1 cut(s) 792
BlsI GCNGC 4 cut(s) 68, 798, 801, 1081
BmcAI AGTACT 1 cut(s) 1028
Bme1390I CCNGG 2 cut(s) 266, 1464
Bme18I GGWCC 2 cut(s) 190, 514
BmgT120I GGNCC 3 cut(s) 190, 514, 1367
BmiI GGNNCC 6 cut(s) 349, 406, 1161, 1457, 1516, 1677
BmrFI CCNGG 2 cut(s) 266, 1464
BmrI ACTGGG 1 cut(s) 1326
BmsI GCATC 4 cut(s) 364, 520, 1024, 1177
BmuI ACTGGG 1 cut(s) 1326
BoxI GACNNNNGTC 1 cut(s) 1764
BpiI GAAGAC 2 cut(s) 62, 1328
BpmI CTGGAG 2 cut(s) 366, 1253
Bpu10I CCTNAGC 2 cut(s) 1056, 1206
Bpu1102I GCTNAGC 1 cut(s) 792
Bpu14I TTCGAA 1 cut(s) 486
BpuEI CTTGAG 4 cut(s) 95, 647, 668, 1080
Bsa29I ATCGAT 2 cut(s) 122, 1645
BsaI GGTCTC 2 cut(s) 1056, 1719
BsaJI CCNNGG 4 cut(s) 67, 828, 1279, 1463
BsaXI ACNNNNNCTCC 4 cut(s) 436, 466, 1147, 1177
Bsc4I CCNNNNNNNGG 8 cut(s) 199, 344, 389, 1156, 1280, 1439, 1735, 1832
Bse1I ACTGG 4 cut(s) 349, 1188, 1332, 1669
BseBI CCWGG 2 cut(s) 266, 1464
BseCI ATCGAT 2 cut(s) 122, 1645
BseDI CCNNGG 4 cut(s) 67, 828, 1279, 1463
BseGI GGATG 5 cut(s) 164, 330, 1015, 1400, 1822
BseLI CCNNNNNNNGG 8 cut(s) 199, 344, 389, 1156, 1280, 1439, 1735, 1832
BseMII CTCAG 5 cut(s) 806, 1046, 1070, 1220, 1367
BseNI ACTGG 4 cut(s) 349, 1188, 1332, 1669
BseRI GAGGAG 5 cut(s) 414, 888, 963, 1362, 1510
BseSI GKGCMC 1 cut(s) 613
BseXI GCAGC 3 cut(s) 783, 811, 1066
BseYI CCCAGC 2 cut(s) 1218, 1658
BsgI GTGCAG 1 cut(s) 1065
Bsh1236I CGCG 1 cut(s) 69
BshFI GGCC 1 cut(s) 1369
BshNI GGYRCC 3 cut(s) 1159, 1455, 1514
BshVI ATCGAT 2 cut(s) 122, 1645
BsiHKAI GWGCWC 2 cut(s) 264, 613
BslFI GGGAC 2 cut(s) 321, 1675
BslI CCNNNNNNNGG 8 cut(s) 199, 344, 389, 1156, 1280, 1439, 1735, 1832
BsmAI GTCTC 3 cut(s) 709, 1056, 1719
BsmFI GGGAC 2 cut(s) 321, 1675
BsmI GAATGC 2 cut(s) 862, 871
BsnI GGCC 1 cut(s) 1369
Bso31I GGTCTC 2 cut(s) 1056, 1719
Bsp119I TTCGAA 1 cut(s) 486
Bsp1286I GDGCHC 2 cut(s) 264, 613
Bsp143I GATC 9 cut(s) 123, 203, 303, 404, 835, 1041, 1493, 1642, 1646
Bsp1720I GCTNAGC 1 cut(s) 792
BspACI CCGC 8 cut(s) 67, 69, 97, 640, 1166, 1214, 1626, 1772
BspANI GGCC 1 cut(s) 1369
BspCNI CTCAG 5 cut(s) 805, 1045, 1069, 1219, 1366
BspDI ATCGAT 2 cut(s) 122, 1645
BspFNI CGCG 1 cut(s) 69
BspLI GGNNCC 6 cut(s) 349, 406, 1161, 1457, 1516, 1677
BspMAI CTGCAG 2 cut(s) 801, 1132
BspMI ACCTGC 1 cut(s) 1121
BspPI GGATC 6 cut(s) 211, 399, 412, 830, 1036, 1501
BspQI GCTCTTC 1 cut(s) 252
BspT104I TTCGAA 1 cut(s) 486
BspT107I GGYRCC 3 cut(s) 1159, 1455, 1514
BspTNI GGTCTC 2 cut(s) 1056, 1719
BsrI ACTGG 4 cut(s) 349, 1188, 1332, 1669
BssECI CCNNGG 4 cut(s) 67, 828, 1279, 1463
BssMI GATC 9 cut(s) 123, 203, 303, 404, 835, 1041, 1493, 1642, 1646
BssT1I CCWWGG 2 cut(s) 828, 1279
Bst2UI CCWGG 2 cut(s) 266, 1464
Bst4CI ACNGT 5 cut(s) 1159, 1200, 1479, 1744, 1766
Bst6I CTCTTC 5 cut(s) 32, 252, 294, 358, 1546
BstBI TTCGAA 1 cut(s) 486
BstC8I GCNNGC 2 cut(s) 1128, 1343
BstDEI CTNAG 6 cut(s) 734, 792, 1032, 1056, 1206, 1353
BstDSI CCRYGG 1 cut(s) 67
BstEII GGTNACC 2 cut(s) 1283, 1577
BstENI CCTNNNNNAGG 3 cut(s) 197, 1278, 1437
BstF5I GGATG 5 cut(s) 164, 330, 1015, 1400, 1822
BstFNI CGCG 1 cut(s) 69
BstH2I RGCGCY 1 cut(s) 67
BstHHI GCGC 1 cut(s) 66
BstKTI GATC 9 cut(s) 126, 206, 306, 407, 838, 1044, 1496, 1645, 1649
BstMAI GTCTC 3 cut(s) 709, 1056, 1719
BstMBI GATC 9 cut(s) 123, 203, 303, 404, 835, 1041, 1493, 1642, 1646
BstMWI GCNNNNNNNGC 3 cut(s) 96, 639, 866
BstNI CCWGG 2 cut(s) 266, 1464
BstNSI RCATGY 2 cut(s) 524, 1616
BstPAI GACNNNNGTC 1 cut(s) 1764
BstPI GGTNACC 2 cut(s) 1283, 1577
BstSCI CCNGG 2 cut(s) 264, 1462
BstSFI CTRYAG 2 cut(s) 797, 1128
BstSLI GKGCMC 1 cut(s) 613
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 3 cut(s) 783, 811, 1066
BstV2I GAAGAC 2 cut(s) 62, 1328
BstX2I RGATCY 4 cut(s) 303, 404, 835, 1041
BstYI RGATCY 4 cut(s) 303, 404, 835, 1041
Bsu15I ATCGAT 2 cut(s) 122, 1645
BsuI GTATCC 1 cut(s) 1212
BsuRI GGCC 1 cut(s) 1369
BsuTUI ATCGAT 2 cut(s) 122, 1645
BtgI CCRYGG 1 cut(s) 67
BtsCI GGATG 5 cut(s) 164, 330, 1015, 1400, 1822
BtsI GCAGTG 1 cut(s) 1623
BtsIMutI CAGTG 2 cut(s) 342, 1623
BveI ACCTGC 1 cut(s) 1121
Cac8I GCNNGC 2 cut(s) 1128, 1343
CaiI CAGNNNCTG 1 cut(s) 875
CfoI GCGC 1 cut(s) 66
Cfr13I GGNCC 3 cut(s) 190, 514, 1367
Cfr42I CCGCGG 1 cut(s) 70
ClaI ATCGAT 2 cut(s) 122, 1645
CsiI ACCWGGT 1 cut(s) 264
Csp6I GTAC 5 cut(s) 998, 1027, 1160, 1456, 1515
CviQI GTAC 5 cut(s) 998, 1027, 1160, 1456, 1515
DdeI CTNAG 6 cut(s) 734, 792, 1032, 1056, 1206, 1353
DpnI GATC 9 cut(s) 125, 205, 305, 406, 837, 1043, 1495, 1644, 1648
DpnII GATC 9 cut(s) 123, 203, 303, 404, 835, 1041, 1493, 1642, 1646
DraIII CACNNNGTG 2 cut(s) 268, 1364
Eam1104I CTCTTC 5 cut(s) 32, 252, 294, 358, 1546
EarI CTCTTC 5 cut(s) 32, 252, 294, 358, 1546
Eco130I CCWWGG 2 cut(s) 828, 1279
Eco31I GGTCTC 2 cut(s) 1056, 1719
Eco47I GGWCC 2 cut(s) 190, 514
Eco57I CTGAAG 2 cut(s) 74, 1314
Eco91I GGTNACC 2 cut(s) 1283, 1577
EcoNI CCTNNNNNAGG 3 cut(s) 197, 1278, 1437
EcoO65I GGTNACC 2 cut(s) 1283, 1577
EcoRI GAATTC 1 cut(s) 652
EcoRII CCWGG 2 cut(s) 264, 1462
EcoT14I CCWWGG 2 cut(s) 828, 1279
ErhI CCWWGG 2 cut(s) 828, 1279
FaqI GGGAC 2 cut(s) 321, 1675
FauI CCCGC 2 cut(s) 104, 647
Fnu4HI GCNGC 4 cut(s) 67, 797, 800, 1080
FokI GGATG 5 cut(s) 151, 317, 1002, 1387, 1829
Fsp4HI GCNGC 4 cut(s) 67, 797, 800, 1080
FspBI CTAG 6 cut(s) 411, 1280, 1362, 1425, 1599, 1830
GlaI GCGC 1 cut(s) 65
GluI GCNGC 4 cut(s) 67, 797, 800, 1080
GsaI CCCAGC 2 cut(s) 1222, 1662
GsuI CTGGAG 2 cut(s) 366, 1253
HaeII RGCGCY 1 cut(s) 67
HaeIII GGCC 1 cut(s) 1369
HhaI GCGC 1 cut(s) 66
Hin6I GCGC 1 cut(s) 64
HinP1I GCGC 1 cut(s) 64
HincII GTYRAC 2 cut(s) 1193, 1777
HindII GTYRAC 2 cut(s) 1193, 1777
HindIII AAGCTT 1 cut(s) 88
HinfI GANTC 6 cut(s) 72, 115, 431, 479, 848, 872
HphI GGTGA 4 cut(s) 85, 902, 1277, 1488
Hpy166II GTNNAC 5 cut(s) 611, 931, 998, 1193, 1777
Hpy188I TCNGA 9 cut(s) 392, 461, 547, 855, 864, 1035, 1356, 1722, 1749
Hpy188III TCNNGA 5 cut(s) 34, 112, 527, 758, 1097
Hpy8I GTNNAC 5 cut(s) 611, 931, 998, 1193, 1777
HpyCH4III ACNGT 5 cut(s) 1159, 1200, 1479, 1744, 1766
HpyCH4IV ACGT 1 cut(s) 490
HpyCH4V TGCA 8 cut(s) 494, 611, 745, 799, 869, 1082, 1130, 1616
HpyF10VI GCNNNNNNNGC 3 cut(s) 96, 639, 866
HpyF3I CTNAG 6 cut(s) 734, 792, 1032, 1056, 1206, 1353
HpySE526I ACGT 1 cut(s) 490
HspAI GCGC 1 cut(s) 64
KpnI GGTACC 3 cut(s) 1163, 1459, 1518
KspI CCGCGG 1 cut(s) 70
Kzo9I GATC 9 cut(s) 123, 203, 303, 404, 835, 1041, 1493, 1642, 1646
LguI GCTCTTC 1 cut(s) 252
LmnI GCTCC 6 cut(s) 347, 901, 976, 993, 1108, 1593
Lsp1109I GCAGC 3 cut(s) 783, 811, 1066
LweI GCATC 4 cut(s) 364, 520, 1024, 1177
MabI ACCWGGT 1 cut(s) 264
MaeI CTAG 6 cut(s) 411, 1280, 1362, 1425, 1599, 1830
MaeII ACGT 1 cut(s) 490
MaeIII GTNAC 6 cut(s) 195, 207, 1140, 1283, 1577, 1702
MalI GATC 9 cut(s) 125, 205, 305, 406, 837, 1043, 1495, 1644, 1648
MboI GATC 9 cut(s) 123, 203, 303, 404, 835, 1041, 1493, 1642, 1646
MfeI CAATTG 2 cut(s) 842, 1121
MflI RGATCY 4 cut(s) 303, 404, 835, 1041
MhlI GDGCHC 2 cut(s) 264, 613
MlyI GAGTC 1 cut(s) 440
MmeI TCCRAC 2 cut(s) 465, 1421
MseI TTAA 2 cut(s) 1254, 1470
MslI CAYNNNNRTG 2 cut(s) 696, 1488
MspA1I CMGCKG 4 cut(s) 69, 796, 1079, 1658
MspR9I CCNGG 2 cut(s) 266, 1464
MunI CAATTG 2 cut(s) 842, 1121
Mva1269I GAATGC 2 cut(s) 862, 871
MvaI CCWGG 2 cut(s) 266, 1464
MvnI CGCG 1 cut(s) 69
MwoI GCNNNNNNNGC 3 cut(s) 96, 639, 866
NdeII GATC 9 cut(s) 123, 203, 303, 404, 835, 1041, 1493, 1642, 1646
NlaIV GGNNCC 6 cut(s) 349, 406, 1161, 1457, 1516, 1677
NmuCI GTSAC 5 cut(s) 195, 207, 1140, 1283, 1702
NspI RCATGY 2 cut(s) 524, 1616
NspV TTCGAA 1 cut(s) 486
PciI ACATGT 1 cut(s) 520
PciSI GCTCTTC 1 cut(s) 252
PctI GAATGC 2 cut(s) 862, 871
PfeI GAWTC 5 cut(s) 72, 115, 479, 848, 872
PkrI GCNGC 4 cut(s) 68, 798, 801, 1081
PleI GAGTC 1 cut(s) 439
PpsI GAGTC 1 cut(s) 439
PscI ACATGT 1 cut(s) 520
PshAI GACNNNNGTC 1 cut(s) 1764
Psp6I CCWGG 2 cut(s) 264, 1462
PspEI GGTNACC 2 cut(s) 1283, 1577
PspFI CCCAGC 2 cut(s) 1218, 1658
PspGI CCWGG 2 cut(s) 264, 1462
PspN4I GGNNCC 6 cut(s) 349, 406, 1161, 1457, 1516, 1677
PspPI GGNCC 3 cut(s) 190, 514, 1367
PstI CTGCAG 2 cut(s) 801, 1132
PstNI CAGNNNCTG 1 cut(s) 875
PsuI RGATCY 4 cut(s) 303, 404, 835, 1041
PvuII CAGCTG 3 cut(s) 796, 1079, 1658
RsaI GTAC 5 cut(s) 999, 1028, 1161, 1457, 1516
RsaNI GTAC 5 cut(s) 998, 1027, 1160, 1456, 1515
RseI CAYNNNNRTG 2 cut(s) 696, 1488
SacII CCGCGG 1 cut(s) 70
SapI GCTCTTC 1 cut(s) 252
SaqAI TTAA 2 cut(s) 1254, 1470
SatI GCNGC 4 cut(s) 67, 797, 800, 1080
Sau3AI GATC 9 cut(s) 123, 203, 303, 404, 835, 1041, 1493, 1642, 1646
Sau96I GGNCC 3 cut(s) 190, 514, 1367
SbfI CCTGCAGG 1 cut(s) 1132
ScaI AGTACT 1 cut(s) 1028
SchI GAGTC 1 cut(s) 440
ScrFI CCNGG 2 cut(s) 266, 1464
SdaI CCTGCAGG 1 cut(s) 1132
SduI GDGCHC 2 cut(s) 264, 613
SexAI ACCWGGT 1 cut(s) 264
SfaNI GCATC 4 cut(s) 364, 520, 1024, 1177
SfcI CTRYAG 2 cut(s) 797, 1128
Sfr303I CCGCGG 1 cut(s) 70
SfuI TTCGAA 1 cut(s) 486
SgrBI CCGCGG 1 cut(s) 70
SinI GGWCC 2 cut(s) 190, 514
SmiMI CAYNNNNRTG 2 cut(s) 696, 1488
SmlI CTYRAG 4 cut(s) 110, 626, 647, 1095
SmoI CTYRAG 4 cut(s) 110, 626, 647, 1095
Sse8387I CCTGCAGG 1 cut(s) 1132
SsiI CCGC 8 cut(s) 67, 69, 97, 640, 1166, 1214, 1626, 1772
SspI AATATT 3 cut(s) 730, 1070, 1388
SspMI CTAG 6 cut(s) 411, 1280, 1362, 1425, 1599, 1830
StyD4I CCNGG 2 cut(s) 264, 1462
StyI CCWWGG 2 cut(s) 828, 1279
TaaI ACNGT 5 cut(s) 1159, 1200, 1479, 1744, 1766
TaiI ACGT 1 cut(s) 493
TaqI TCGA 4 cut(s) 122, 486, 1523, 1645
TaqII GACCGA 1 cut(s) 531
TatI WGTACW 1 cut(s) 1026
TauI GCSGC 1 cut(s) 69
TfiI GAWTC 5 cut(s) 72, 115, 479, 848, 872
Tru1I TTAA 2 cut(s) 1254, 1470
Tru9I TTAA 2 cut(s) 1254, 1470
TscAI CASTG 2 cut(s) 349, 1623
TseFI GTSAC 5 cut(s) 195, 207, 1140, 1283, 1702
TseI GCWGC 3 cut(s) 796, 799, 1079
Tsp45I GTSAC 5 cut(s) 195, 207, 1140, 1283, 1702
TspDTI ATGAA 8 cut(s) 160, 170, 254, 578, 578, 1488, 1541, 1820
TspGWI ACGGA 1 cut(s) 323
TspRI CASTG 2 cut(s) 349, 1623
VneI GTGCAC 1 cut(s) 609
VpaK11BI GGWCC 2 cut(s) 190, 514
XagI CCTNNNNNAGG 3 cut(s) 197, 1278, 1437
XapI RAATTY 1 cut(s) 652
XceI RCATGY 2 cut(s) 524, 1616
XcmI CCANNNNNNNNNTGG 2 cut(s) 272, 1833
XmaJI CCTAGG 1 cut(s) 1279
XspI CTAG 6 cut(s) 411, 1280, 1362, 1425, 1599, 1830
ZrmI AGTACT 1 cut(s) 1028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.