UBA-like domain (DUF1421)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01560 AT3G01560 AT5G14540 |
| fragaria_vesca | FvH4_4g26262 FvH4_6g28150 |
| malus_domestica | MD09G1028500.v1.1 MD17G1030000.v1.1 |
| prunus_persica | Prupe.1G550900_v2.0.a1 Prupe.3G290000_v2.0.a1 |
| pyrus_communis | pycom111g02250 pycom17g02740 |
| rosa_chinensis | RchiOBHm_Chr2g0132111 RchiOBHm_Chr5g0029881 |
| rosa_laevigata | RLG00000019227 |
| rosa_multiflora | Rmu_sc0004598.1_g000012 Rmu_ssc0000143.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00112390 |
| rosa_rugosa | Rorug02G0169700 Rorug02G0302300 Rorug02G0392200 Rorug05G0511500 |
| rosa_samantha | Rh1BG190500 Rh1DG219300 Rh2AG355300 Rh2BG361500 Rh2CG338900 Rh2DG378100 Rh4DG188100 Rh5BG551200 Rh5CG574100 Rh5DG211600 Rh7BG454200 |
| rosa_wichuraiana | Rw2G028850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 214 |
| AclI | AACGTT | 1 cut(s) | 64 |
| AcsI | RAATTY | 1 cut(s) | 226 |
| AgsI | TTSAA | 4 cut(s) | 69, 164, 244, 374 |
| AluBI | AGCT | 1 cut(s) | 350 |
| AluI | AGCT | 1 cut(s) | 350 |
| Alw21I | GWGCWC | 1 cut(s) | 187 |
| Alw26I | GTCTC | 1 cut(s) | 283 |
| Alw44I | GTGCAC | 1 cut(s) | 183 |
| ApaLI | GTGCAC | 1 cut(s) | 183 |
| ApoI | RAATTY | 1 cut(s) | 226 |
| AspS9I | GGNCC | 1 cut(s) | 88 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| AsuII | TTCGAA | 1 cut(s) | 60 |
| AvaII | GGWCC | 1 cut(s) | 88 |
| BaeGI | GKGCMC | 1 cut(s) | 187 |
| Bbv12I | GWGCWC | 1 cut(s) | 187 |
| BccI | CCATC | 1 cut(s) | 272 |
| BceAI | ACGGC | 1 cut(s) | 468 |
| BcoDI | GTCTC | 1 cut(s) | 283 |
| BfaI | CTAG | 1 cut(s) | 347 |
| Bme18I | GGWCC | 1 cut(s) | 88 |
| BmgT120I | GGNCC | 1 cut(s) | 88 |
| Bpu14I | TTCGAA | 1 cut(s) | 60 |
| BpuEI | CTTGAG | 2 cut(s) | 221, 242 |
| BseMII | CTCAG | 1 cut(s) | 402 |
| BseSI | GKGCMC | 1 cut(s) | 187 |
| BsiHKAI | GWGCWC | 1 cut(s) | 187 |
| BsmAI | GTCTC | 1 cut(s) | 283 |
| Bsp119I | TTCGAA | 1 cut(s) | 60 |
| Bsp1286I | GDGCHC | 1 cut(s) | 187 |
| BspACI | CCGC | 1 cut(s) | 214 |
| BspCNI | CTCAG | 1 cut(s) | 403 |
| BspT104I | TTCGAA | 1 cut(s) | 60 |
| BstBI | TTCGAA | 1 cut(s) | 60 |
| BstDEI | CTNAG | 2 cut(s) | 308, 411 |
| BstMAI | GTCTC | 1 cut(s) | 283 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 213 |
| BstSLI | GKGCMC | 1 cut(s) | 187 |
| Cfr13I | GGNCC | 1 cut(s) | 88 |
| CviAII | CATG | 2 cut(s) | 136, 266 |
| CviJI | RGCY | 4 cut(s) | 350, 418, 455, 468 |
| CviKI_1 | RGCY | 4 cut(s) | 350, 418, 455, 468 |
| DdeI | CTNAG | 2 cut(s) | 308, 411 |
| Eco47I | GGWCC | 1 cut(s) | 88 |
| EcoRI | GAATTC | 1 cut(s) | 226 |
| FaeI | CATG | 2 cut(s) | 139, 269 |
| FaiI | YATR | 8 cut(s) | 32, 42, 116, 137, 147, 170, 267, 422 |
| FatI | CATG | 2 cut(s) | 135, 265 |
| FauI | CCCGC | 1 cut(s) | 221 |
| FspBI | CTAG | 1 cut(s) | 347 |
| Hin1II | CATG | 2 cut(s) | 139, 269 |
| HinfI | GANTC | 1 cut(s) | 53 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy166II | GTNNAC | 1 cut(s) | 185 |
| Hpy188I | TCNGA | 1 cut(s) | 121 |
| Hpy188III | TCNNGA | 2 cut(s) | 101, 371 |
| Hpy8I | GTNNAC | 1 cut(s) | 185 |
| HpyAV | CCTTC | 4 cut(s) | 67, 79, 167, 238 |
| HpyCH4IV | ACGT | 1 cut(s) | 64 |
| HpyCH4V | TGCA | 3 cut(s) | 185, 319, 436 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 213 |
| HpyF3I | CTNAG | 2 cut(s) | 308, 411 |
| HpySE526I | ACGT | 1 cut(s) | 64 |
| Hsp92II | CATG | 2 cut(s) | 139, 269 |
| LpnPI | CCDG | 1 cut(s) | 114 |
| MaeI | CTAG | 1 cut(s) | 347 |
| MaeII | ACGT | 1 cut(s) | 64 |
| MboII | GAAGA | 1 cut(s) | 151 |
| MhlI | GDGCHC | 1 cut(s) | 187 |
| MluCI | AATT | 5 cut(s) | 37, 111, 154, 226, 399 |
| MnlI | CCTC | 1 cut(s) | 352 |
| MslI | CAYNNNNRTG | 1 cut(s) | 270 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 213 |
| NlaIII | CATG | 2 cut(s) | 139, 269 |
| NspV | TTCGAA | 1 cut(s) | 60 |
| PfeI | GAWTC | 1 cut(s) | 53 |
| Psp1406I | AACGTT | 1 cut(s) | 64 |
| PspPI | GGNCC | 1 cut(s) | 88 |
| RseI | CAYNNNNRTG | 1 cut(s) | 270 |
| Sau96I | GGNCC | 1 cut(s) | 88 |
| SduI | GDGCHC | 1 cut(s) | 187 |
| SetI | ASST | 6 cut(s) | 67, 178, 222, 249, 352, 363 |
| SfuI | TTCGAA | 1 cut(s) | 60 |
| SinI | GGWCC | 1 cut(s) | 88 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 270 |
| SmlI | CTYRAG | 2 cut(s) | 200, 221 |
| SmoI | CTYRAG | 2 cut(s) | 200, 221 |
| Sse9I | AATT | 5 cut(s) | 37, 111, 154, 226, 399 |
| SsiI | CCGC | 1 cut(s) | 214 |
| SspI | AATATT | 1 cut(s) | 304 |
| SspMI | CTAG | 1 cut(s) | 347 |
| TaiI | ACGT | 1 cut(s) | 67 |
| TaqI | TCGA | 1 cut(s) | 60 |
| TaqII | GACCGA | 1 cut(s) | 105 |
| TasI | AATT | 5 cut(s) | 37, 111, 154, 226, 399 |
| TfiI | GAWTC | 1 cut(s) | 53 |
| TspDTI | ATGAA | 1 cut(s) | 152 |
| VneI | GTGCAC | 1 cut(s) | 183 |
| VpaK11BI | GGWCC | 1 cut(s) | 88 |
| XapI | RAATTY | 1 cut(s) | 226 |
| XspI | CTAG | 1 cut(s) | 347 |