FvH4_4g35780

AMP deaminase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0001592
Physical Location & Seq
Reverse (-)
32964758 .. 32971111
6354 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g35780.t1

Sequence Viewer

Length: 2622 bp
ATGGACTCGTCATCTTCTTCCACCTCTTCAACCTCCGCTCTTAACCTAGCCATGGCCGCCTTGGTCGGCGCCTCCCTCATGGCCGTCTCCGCCTTCTACATCCACAAACGCAGCGTCGACCAAGTCATCGACCGCCTCATCGAGATCCGCCGCAAACCGCCGTCTCGCCTCCGCTCTCAAGACGCCGACGACAACGCCGACGAAGAAGAAGAAGAAGACGATTACGTCGAAGAAGACGAGCAGCAAGACCAGCGGCGAGGCTTCGGCTCTGACCGCGACGCCGTCACTGATAATCGCAAAACGGCGCCGTCCAGGTCGTTGGACGAGAAATCGATTCACTATTACAGAATCTCGTCCTCGCTGCCGAATGCGGATATGAGGAGCGGCGGTTTGATCGACGAGGACGCCAAGTTTGATCCTCTCTCCAATTATCGAGCTCCTCGGTTTTCTTCCTCGGCGGAACGGCTCAATTTCATCCCCTCCGGCCTTCCGCCGCTCCGAACTGGTCAAGCAAATGAGTCTCAGTCCTTGAATTCCACTACAAGGATGGCTACGTCTGTGTCTGTTGGTAGGTTGACGACGCCGAGATCTCACGCCGGACTAGTGGATGATTCCGACGAGGAAGGAACTGAGTATGCAAATGAAGATGATTGTCCTTTCAACTATGAGAATGGAGATGCAAATGACAATTCAGTTTACCAAAATGAAGTGATGTGTACAAGTAACAACTTCATGCAAGAGGTAGATGGAGCTACAGCACAGCTGGGGAGGAGTGACCCTTCTTTTGCAAGAATTCTTTTGCCACTAAGTGCACCAGTGAATGAGTCAATAAGCAAAGAGGATGAAGAAGTACAAAGGATGATTCGAGATTGCTTGGATCTGCGTAAGAAGTACCTTTACAGGGAAAATGTTGTTCCATGGAGGGTAGCCAGGCCAGACTCATCAGAGAAGAAAAGCAACCCATTTCATTTTGAACCTGTTAAACCATCAGCTCACTGCTTTAGGATGGAAGACGGTGTCGTACATGTTTATGCACGCGAAAATGAATCTGAAGAGTTGTACCCTGTTGCGAGTGCAACAACATTTTTCACTGATCTCCATTATCTTCTTAAAGTTGTGTCTATTGGAAATGTCCGCTCTGTATGCCATCATAGGTTAAGATTTCTTGACGAGAAATACCGTGTACATCATTTATTAAATGAGGGGGAGGAGTTTTTAGCTCAGAAGAGTGCACCCCACCGTGATTTTTACAACATTAGAAAAGTTGATACACATGTGCATCACTCTGCTTGCATGAACCAGAAGCATCTTCTGAACTTTATCAAGTCAAAGCTTAAAAAAGAACCTGACGAGGTAGTCATATTCAGAGATGGAAAATATCTTACACTTAAGGAAGTTTTTAAGAGTTTGGACTTGACAGGGTATGATCTGAATGTTGACTTATTGGATGTTCATGCGGATAAGACTACTTTTCATCGATTTGACAAGTTCAACCTAAAGTATAATCCGTGTGGCCAGAGCAGACTCAGAGAGATATTCTTGAAGCAAGACAATCTAATCCAAGGACGATTTTTAGCAGAAGTAACAAAGGAAGTTTTGAAAGATCTCGAAGCCATGAAATACCAGATGGCAGAGTACAGGATTTCAGTTTATGGGAGAAAACAAAGTGAGTGGGATCAACTGGCTAGTTGGTTTGTTAACAATGACATTTATAGCGAGAATGTAGTATGGTTAATACAGCTACCACGGTTATACAATATCTACAAGAAGATGGGGATTGTTACCTCTTTCCAGAACATTTTAGATAATGTTTTCATTCCACTCTTTGAAGTCACGGTGGATCCAAATTCACATCCTCAATTACATTTGTTCCTGAAGCAGGTGGTGGGTTTTGACGTTGTAGACGATGAAAGTAGACCAGAAAGGCGTCCGACGAAACATATGCCAACACCATCTGAATGGACTAACGAATTCAATCCTGCATATTCTTACTATGCTTATTACTGCTATGCAAACTTGTACACTCTTAATAAGCTTCGTGAGTCAAAAGGAATGACTACAATAAAATTCCGGCCGCACTGTGGAGAGGCAGGTGATGTTGACCATTTGGCTGCGGGATTTCTTGTATGCCATAATATCTCACATGGTATCAATCTTCGGTACTCTCCAGTTCTGCAATACCTATATTACCTGGGGCAGGTGGGACTGCTTATGTCACCCTTGAGCAATAATTCTCTTTTCTTGGATTACAAGAAAAACCCGTTCCCTGTGTTCTTTCAACGCGGGCTAAATGTGTCGCTTTCAAGCGATGATCCTTTGCTAATTCATTTGACAAAAGAAGCGCTGGTGGAAGAATATAGCGTTGCAGCACAGGTGTGGAAGCTCAGTGCTTGTGACCTCTGTGAGATTGCTAGAAATTCGGTATATCATTCTGGATTTTCACATGCAGCAAAGACACATTGGCTTGGTAGCAAGTATTTCTTGAGAGGCCCTAAAGGAAATGATATCCAAAAGACAAACGTTCCCAATTTGAGGATTGCCTTTCGAGAAACGACCTGGAAGGAGGAGATGCAGTATATCTACCACGGAGAAGCTGAGTTTCCAGAAGAAGTTGATCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130
Pfam Domains
Protein Families
A_deaminase

Protein Analysis

874

Amino Acids

100.28

Weight (kDa)

5.71

Isoelectric Point (pI)

46.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP_deaminase PF19326 281 - 861 2.2e-289 AMP deaminase
A_deaminase PF00962 688 - 818 8.6e-09 Adenosine deaminase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 1870, 2081, 2188
AasI GACNNNNNNGTC 2 cut(s) 224, 1355
Acc36I ACCTGC 3 cut(s) 1870, 2081, 2188
AccB1I GGYRCC 2 cut(s) 68, 304
AccBSI CCGCTC 5 cut(s) 38, 174, 384, 496, 1137
AccI GTMKAC 3 cut(s) 117, 1902, 1915
AccII CGCG 3 cut(s) 276, 1038, 2283
AclI AACGTT 1 cut(s) 2520
AclWI GGATC 8 cut(s) 139, 410, 885, 1683, 1835, 1848, 2306, 2609
AcoI YGGCCR 4 cut(s) 54, 81, 1513, 2072
AcsI RAATTY 6 cut(s) 532, 792, 1846, 1970, 2066, 2416
AcuI CTGAAG 2 cut(s) 1071, 1895
AcyI GRCGYC 7 cut(s) 69, 183, 279, 305, 405, 581, 1927
AdeI CACNNNGTG 1 cut(s) 809
AfaI GTAC 9 cut(s) 718, 852, 893, 1023, 1061, 1185, 1637, 2021, 2162
AfeI AGCGCT 1 cut(s) 2343
AfiI CCNNNNNNNGG 7 cut(s) 52, 543, 901, 1879, 2081, 2197, 2532
AflII CTTAAG 1 cut(s) 1388
AflIII ACRYGT 2 cut(s) 1024, 1273
AhlI ACTAGT 1 cut(s) 601
AjnI CCWGG 4 cut(s) 311, 929, 2190, 2555
AleI CACNNNNGTG 1 cut(s) 2374
Alw21I GWGCWC 3 cut(s) 439, 814, 1234
Alw26I GTCTC 3 cut(s) 91, 168, 525
Alw44I GTGCAC 2 cut(s) 810, 1230
AlwI GGATC 8 cut(s) 139, 410, 885, 1683, 1835, 1848, 2306, 2609
Aor51HI AGCGCT 1 cut(s) 2343
AoxI GGCC 7 cut(s) 54, 81, 484, 932, 1513, 2072, 2488
ApaLI GTGCAC 2 cut(s) 810, 1230
ApeKI GCWGC 6 cut(s) 111, 241, 361, 2111, 2366, 2447
ApoI RAATTY 6 cut(s) 532, 792, 1846, 1970, 2066, 2416
ArsI GACNNNNNNTTYG 6 cut(s) 99, 131, 395, 427, 767, 799
AspLEI GCGC 3 cut(s) 71, 307, 2344
AspS9I GGNCC 1 cut(s) 2489
AsuHPI GGTGA 2 cut(s) 2105, 2208
BaeGI GKGCMC 2 cut(s) 814, 1234
BaeI ACNNNNGTAYC 2 cut(s) 1260, 1293
BalI TGGCCA 1 cut(s) 1515
BamHI GGATCC 1 cut(s) 1840
BanI GGYRCC 2 cut(s) 68, 304
BanII GRGCYC 1 cut(s) 439
BarI GAAGNNNNNNTAC 2 cut(s) 881, 913
BbsI GAAGAC 3 cut(s) 222, 240, 1017
Bbv12I GWGCWC 3 cut(s) 439, 814, 1234
BbvI GCAGC 6 cut(s) 123, 253, 348, 2098, 2378, 2459
BccI CCATC 9 cut(s) 541, 740, 994, 1000, 1155, 1364, 1621, 1765, 1960
BceAI ACGGC 6 cut(s) 68, 145, 266, 292, 318, 479
BcgI CGANNNNNNTGC 2 cut(s) 1924, 1958
BciT130I CCWGG 4 cut(s) 313, 931, 2192, 2557
BcoDI GTCTC 3 cut(s) 91, 168, 525
BcuI ACTAGT 1 cut(s) 601
BfaI CTAG 4 cut(s) 47, 602, 1686, 2412
BfmI CTRYAG 1 cut(s) 753
BfoI RGCGCY 3 cut(s) 72, 308, 2345
BfrI CTTAAG 1 cut(s) 1388
BfuAI ACCTGC 3 cut(s) 1870, 2081, 2188
BglII AGATCT 2 cut(s) 587, 1603
Bme1390I CCNGG 4 cut(s) 313, 931, 2192, 2557
BmgT120I GGNCC 1 cut(s) 2489
BmiI GGNNCC 3 cut(s) 70, 306, 1842
BmrFI CCNGG 4 cut(s) 313, 931, 2192, 2557
BmsI GCATC 4 cut(s) 667, 1288, 1315, 2559
BpiI GAAGAC 3 cut(s) 222, 240, 1017
BpmI CTGGAG 1 cut(s) 2151
BpuEI CTTGAG 3 cut(s) 162, 2242, 2503
Bsa29I ATCGAT 2 cut(s) 332, 1477
BsaHI GRCGYC 7 cut(s) 69, 183, 279, 305, 405, 581, 1927
BsaJI CCNNGG 9 cut(s) 51, 60, 440, 453, 917, 1561, 1745, 2191, 2584
BsaXI ACNNNNNCTCC 4 cut(s) 373, 403, 2558, 2588
Bsc4I CCNNNNNNNGG 7 cut(s) 52, 543, 901, 1879, 2081, 2197, 2532
Bse1I ACTGG 4 cut(s) 508, 815, 1686, 2168
BseBI CCWGG 4 cut(s) 313, 931, 2192, 2557
BseCI ATCGAT 2 cut(s) 332, 1477
BseDI CCNNGG 9 cut(s) 51, 60, 440, 453, 917, 1561, 1745, 2191, 2584
BseGI GGATG 9 cut(s) 99, 474, 552, 613, 847, 864, 1011, 1453, 1852
BseLI CCNNNNNNNGG 7 cut(s) 52, 543, 901, 1879, 2081, 2197, 2532
BseMII CTCAG 6 cut(s) 536, 621, 1235, 1540, 2398, 2586
BseNI ACTGG 4 cut(s) 508, 815, 1686, 2168
BseRI GAGGAG 5 cut(s) 394, 429, 784, 1223, 2579
BseSI GKGCMC 2 cut(s) 814, 1234
BseX3I CGGCCG 1 cut(s) 2072
BseXI GCAGC 6 cut(s) 123, 253, 348, 2098, 2378, 2459
BseYI CCCAGC 1 cut(s) 763
Bsh1236I CGCG 3 cut(s) 276, 1038, 2283
Bsh1285I CGRYCG 2 cut(s) 133, 2075
BshFI GGCC 7 cut(s) 56, 83, 486, 934, 1515, 2074, 2490
BshNI GGYRCC 2 cut(s) 68, 304
BshVI ATCGAT 2 cut(s) 332, 1477
BsiEI CGRYCG 2 cut(s) 133, 2075
BsiHKAI GWGCWC 3 cut(s) 439, 814, 1234
BsiSI CCGG 3 cut(s) 483, 597, 2071
BslFI GGGAC 1 cut(s) 2217
BslI CCNNNNNNNGG 7 cut(s) 52, 543, 901, 1879, 2081, 2197, 2532
BsmAI GTCTC 3 cut(s) 91, 168, 525
BsmBI CGTCTC 2 cut(s) 91, 168
BsmFI GGGAC 1 cut(s) 2217
BsmI GAATGC 1 cut(s) 373
BsnI GGCC 7 cut(s) 56, 83, 486, 934, 1515, 2074, 2490
Bsp1286I GDGCHC 3 cut(s) 439, 814, 1234
Bsp1407I TGTACA 3 cut(s) 716, 1183, 2019
Bsp19I CCATGG 2 cut(s) 51, 917
BspANI GGCC 7 cut(s) 56, 83, 486, 934, 1515, 2074, 2490
BspCNI CTCAG 6 cut(s) 535, 622, 1234, 1539, 2397, 2587
BspDI ATCGAT 2 cut(s) 332, 1477
BspFNI CGCG 3 cut(s) 276, 1038, 2283
BspLI GGNNCC 3 cut(s) 70, 306, 1842
BspMI ACCTGC 3 cut(s) 1870, 2081, 2188
BspPI GGATC 8 cut(s) 139, 410, 885, 1683, 1835, 1848, 2306, 2609
BspT107I GGYRCC 2 cut(s) 68, 304
BspTI CTTAAG 1 cut(s) 1388
BsrBI CCGCTC 5 cut(s) 38, 174, 384, 496, 1137
BsrGI TGTACA 3 cut(s) 716, 1183, 2019
BsrI ACTGG 4 cut(s) 508, 815, 1686, 2168
BssECI CCNNGG 9 cut(s) 51, 60, 440, 453, 917, 1561, 1745, 2191, 2584
BssNI GRCGYC 7 cut(s) 69, 183, 279, 305, 405, 581, 1927
BssT1I CCWWGG 4 cut(s) 51, 60, 917, 1561
Bst2UI CCWGG 4 cut(s) 313, 931, 2192, 2557
Bst4CI ACNGT 6 cut(s) 1016, 1181, 1241, 1749, 1837, 2081
Bst6I CTCTTC 3 cut(s) 31, 1047, 1220
BstACI GRCGYC 7 cut(s) 69, 183, 279, 305, 405, 581, 1927
BstAFI CTTAAG 1 cut(s) 1388
BstAUI TGTACA 3 cut(s) 716, 1183, 2019
BstC8I GCNNGC 3 cut(s) 1036, 1291, 2285
BstDEI CTNAG 7 cut(s) 522, 630, 806, 1221, 1526, 2384, 2595
BstDSI CCRYGG 4 cut(s) 51, 917, 1745, 2584
BstENI CCTNNNNNAGG 2 cut(s) 1877, 2195
BstF5I GGATG 9 cut(s) 99, 474, 552, 613, 847, 864, 1011, 1453, 1852
BstFNI CGCG 3 cut(s) 276, 1038, 2283
BstH2I RGCGCY 3 cut(s) 72, 308, 2345
BstHHI GCGC 3 cut(s) 71, 307, 2344
BstMAI GTCTC 3 cut(s) 91, 168, 525
BstMCI CGRYCG 2 cut(s) 133, 2075
BstMWI GCNNNNNNNGC 5 cut(s) 56, 89, 250, 273, 1143
BstNI CCWGG 4 cut(s) 313, 931, 2192, 2557
BstNSI RCATGY 3 cut(s) 1028, 1277, 2447
BstSCI CCNGG 4 cut(s) 311, 929, 2190, 2555
BstSFI CTRYAG 1 cut(s) 753
BstSLI GKGCMC 2 cut(s) 814, 1234
BstUI CGCG 3 cut(s) 276, 1038, 2283
BstV1I GCAGC 6 cut(s) 123, 253, 348, 2098, 2378, 2459
BstV2I GAAGAC 3 cut(s) 222, 240, 1017
BstX2I RGATCY 5 cut(s) 144, 587, 877, 1603, 1840
BstXI CCANNNNNNTGG 2 cut(s) 319, 1959
BstYI RGATCY 5 cut(s) 144, 587, 877, 1603, 1840
BstZI CGGCCG 1 cut(s) 2072
Bsu15I ATCGAT 2 cut(s) 332, 1477
BsuRI GGCC 7 cut(s) 56, 83, 486, 934, 1515, 2074, 2490
BsuTUI ATCGAT 2 cut(s) 332, 1477
BtgI CCRYGG 4 cut(s) 51, 917, 1745, 2584
BtgZI GCGATG 1 cut(s) 2322
BtsCI GGATG 9 cut(s) 99, 474, 552, 613, 847, 864, 1011, 1453, 1852
BtsI GCAGTG 1 cut(s) 994
BtsIMutI CAGTG 6 cut(s) 285, 822, 994, 1089, 2077, 2392
BveI ACCTGC 3 cut(s) 1870, 2081, 2188
Cac8I GCNNGC 3 cut(s) 1036, 1291, 2285
CfoI GCGC 3 cut(s) 71, 307, 2344
Cfr13I GGNCC 1 cut(s) 2489
ClaI ATCGAT 2 cut(s) 332, 1477
CseI GACGC 6 cut(s) 103, 191, 287, 413, 589, 1916
Csp6I GTAC 9 cut(s) 717, 851, 892, 1022, 1060, 1184, 1636, 2020, 2161
CspCI CAANNNNNGTGG 2 cut(s) 1652, 1687
CviQI GTAC 9 cut(s) 717, 851, 892, 1022, 1060, 1184, 1636, 2020, 2161
DdeI CTNAG 7 cut(s) 522, 630, 806, 1221, 1526, 2384, 2595
DinI GGCGCC 2 cut(s) 70, 306
DraIII CACNNNGTG 1 cut(s) 809
DrdI GACNNNNNNGTC 2 cut(s) 224, 1355
DseDI GACNNNNNNGTC 2 cut(s) 224, 1355
EaeI YGGCCR 4 cut(s) 54, 81, 1513, 2072
EagI CGGCCG 1 cut(s) 2072
Eam1104I CTCTTC 3 cut(s) 31, 1047, 1220
EarI CTCTTC 3 cut(s) 31, 1047, 1220
EciI GGCGGA 4 cut(s) 79, 137, 473, 480
Ecl136II GAGCTC 1 cut(s) 437
EclXI CGGCCG 1 cut(s) 2072
Eco130I CCWWGG 4 cut(s) 51, 60, 917, 1561
Eco24I GRGCYC 1 cut(s) 439
Eco32I GATATC 1 cut(s) 2506
Eco47III AGCGCT 1 cut(s) 2343
Eco52I CGGCCG 1 cut(s) 2072
Eco53kI GAGCTC 1 cut(s) 437
Eco57I CTGAAG 2 cut(s) 1071, 1895
EcoICRI GAGCTC 1 cut(s) 437
EcoNI CCTNNNNNAGG 2 cut(s) 1877, 2195
EcoO109I RGGNCCY 1 cut(s) 2489
EcoRI GAATTC 3 cut(s) 532, 792, 1970
EcoRII CCWGG 4 cut(s) 311, 929, 2190, 2555
EcoRV GATATC 1 cut(s) 2506
EcoT14I CCWWGG 4 cut(s) 51, 60, 917, 1561
EcoT38I GRGCYC 1 cut(s) 439
EgeI GGCGCC 2 cut(s) 70, 306
EheI GGCGCC 2 cut(s) 70, 306
ErhI CCWWGG 4 cut(s) 51, 60, 917, 1561
Esp3I CGTCTC 2 cut(s) 91, 168
FalI AAGNNNNNCTT 2 cut(s) 2465, 2497
FaqI GGGAC 1 cut(s) 2217
FauI CCCGC 2 cut(s) 2107, 2276
FauNDI CATATG 1 cut(s) 1941
FblI GTMKAC 3 cut(s) 117, 1902, 1915
FokI GGATG 9 cut(s) 86, 461, 559, 620, 854, 871, 1018, 1460, 1839
FriOI GRGCYC 1 cut(s) 439
FspBI CTAG 4 cut(s) 47, 602, 1686, 2412
GlaI GCGC 3 cut(s) 70, 306, 2343
GsaI CCCAGC 1 cut(s) 767
GsuI CTGGAG 1 cut(s) 2151
HaeII RGCGCY 3 cut(s) 72, 308, 2345
HaeIII GGCC 7 cut(s) 56, 83, 486, 934, 1515, 2074, 2490
HapII CCGG 3 cut(s) 483, 597, 2071
HgaI GACGC 6 cut(s) 103, 191, 287, 413, 589, 1916
HhaI GCGC 3 cut(s) 71, 307, 2344
Hin1I GRCGYC 7 cut(s) 69, 183, 279, 305, 405, 581, 1927
Hin6I GCGC 3 cut(s) 69, 305, 2342
HinP1I GCGC 3 cut(s) 69, 305, 2342
HincII GTYRAC 5 cut(s) 118, 576, 1438, 1699, 2101
HindII GTYRAC 5 cut(s) 118, 576, 1438, 1699, 2101
HindIII AAGCTT 2 cut(s) 1331, 2033
HpaI GTTAAC 1 cut(s) 1699
HpaII CCGG 3 cut(s) 483, 597, 2071
HphI GGTGA 2 cut(s) 2105, 2208
Hpy99I CGWCG 9 cut(s) 119, 191, 203, 230, 281, 401, 583, 620, 1936
HpyAV CCTTC 5 cut(s) 103, 497, 617, 789, 2554
HpyCH4III ACNGT 6 cut(s) 1016, 1181, 1241, 1749, 1837, 2081
HpyCH4IV ACGT 4 cut(s) 225, 554, 1896, 2520
HpyF10VI GCNNNNNNNGC 5 cut(s) 56, 89, 250, 273, 1143
HpyF3I CTNAG 7 cut(s) 522, 630, 806, 1221, 1526, 2384, 2595
HpySE526I ACGT 4 cut(s) 225, 554, 1896, 2520
Hsp92I GRCGYC 7 cut(s) 69, 183, 279, 305, 405, 581, 1927
HspAI GCGC 3 cut(s) 69, 305, 2342
KasI GGCGCC 2 cut(s) 68, 304
KspAI GTTAAC 1 cut(s) 1699
LmnI GCTCC 4 cut(s) 381, 442, 501, 749
Lsp1109I GCAGC 6 cut(s) 123, 253, 348, 2098, 2378, 2459
LweI GCATC 4 cut(s) 667, 1288, 1315, 2559
MaeI CTAG 4 cut(s) 47, 602, 1686, 2412
MaeII ACGT 4 cut(s) 225, 554, 1896, 2520
MaeIII GTNAC 8 cut(s) 283, 722, 773, 1582, 1780, 1831, 2214, 2393
MbiI CCGCTC 5 cut(s) 38, 174, 384, 496, 1137
MflI RGATCY 5 cut(s) 144, 587, 877, 1603, 1840
MhlI GDGCHC 3 cut(s) 439, 814, 1234
MlsI TGGCCA 1 cut(s) 1515
MluNI TGGCCA 1 cut(s) 1515
Mly113I GGCGCC 2 cut(s) 69, 305
MlyI GAGTC 5 cut(s) 527, 833, 932, 1518, 2051
MmeI TCCRAC 3 cut(s) 300, 639, 1955
Mox20I TGGCCA 1 cut(s) 1515
MscI TGGCCA 1 cut(s) 1515
MslI CAYNNNNRTG 3 cut(s) 1029, 1957, 2374
Msp20I TGGCCA 1 cut(s) 1515
MspA1I CMGCKG 2 cut(s) 253, 763
MspCI CTTAAG 1 cut(s) 1388
MspI CCGG 3 cut(s) 483, 597, 2071
MspR9I CCNGG 4 cut(s) 313, 931, 2192, 2557
Mva1269I GAATGC 1 cut(s) 373
MvaI CCWGG 4 cut(s) 313, 931, 2192, 2557
MvnI CGCG 3 cut(s) 276, 1038, 2283
MwoI GCNNNNNNNGC 5 cut(s) 56, 89, 250, 273, 1143
NarI GGCGCC 2 cut(s) 69, 305
NcoI CCATGG 2 cut(s) 51, 917
NdeI CATATG 1 cut(s) 1941
NlaIV GGNNCC 3 cut(s) 70, 306, 1842
NmeAIII GCCGAG 2 cut(s) 434, 609
NmuCI GTSAC 5 cut(s) 283, 773, 1831, 2214, 2393
NspI RCATGY 3 cut(s) 1028, 1277, 2447
OliI CACNNNNGTG 1 cut(s) 2374
PaqCI CACCTGC 3 cut(s) 1870, 2081, 2188
PciI ACATGT 2 cut(s) 1024, 1273
PcsI WCGNNNNNNNCGW 4 cut(s) 195, 225, 234, 1902
PctI GAATGC 1 cut(s) 373
PfeI GAWTC 5 cut(s) 334, 348, 611, 862, 1046
PflFI GACNNNGTC 3 cut(s) 122, 281, 1016
PleI GAGTC 5 cut(s) 526, 832, 932, 1518, 2050
PluTI GGCGCC 2 cut(s) 72, 308
PpsI GAGTC 5 cut(s) 526, 832, 932, 1518, 2050
PscI ACATGT 2 cut(s) 1024, 1273
Psp124BI GAGCTC 1 cut(s) 439
Psp1406I AACGTT 1 cut(s) 2520
Psp6I CCWGG 4 cut(s) 311, 929, 2190, 2555
PspFI CCCAGC 1 cut(s) 763
PspGI CCWGG 4 cut(s) 311, 929, 2190, 2555
PspN4I GGNNCC 3 cut(s) 70, 306, 1842
PspPI GGNCC 1 cut(s) 2489
PsuI RGATCY 5 cut(s) 144, 587, 877, 1603, 1840
PsyI GACNNNGTC 3 cut(s) 122, 281, 1016
PvuII CAGCTG 1 cut(s) 763
RsaI GTAC 9 cut(s) 718, 852, 893, 1023, 1061, 1185, 1637, 2021, 2162
RsaNI GTAC 9 cut(s) 717, 851, 892, 1022, 1060, 1184, 1636, 2020, 2161
RseI CAYNNNNRTG 3 cut(s) 1029, 1957, 2374
SacI GAGCTC 1 cut(s) 439
SalI GTCGAC 1 cut(s) 116
Sau96I GGNCC 1 cut(s) 2489
SchI GAGTC 5 cut(s) 527, 833, 932, 1518, 2051
ScrFI CCNGG 4 cut(s) 313, 931, 2192, 2557
SduI GDGCHC 3 cut(s) 439, 814, 1234
SfaNI GCATC 4 cut(s) 667, 1288, 1315, 2559
SfcI CTRYAG 1 cut(s) 753
SfoI GGCGCC 2 cut(s) 70, 306
SmiMI CAYNNNNRTG 3 cut(s) 1029, 1957, 2374
SmlI CTYRAG 4 cut(s) 177, 1388, 2221, 2482
SmoI CTYRAG 4 cut(s) 177, 1388, 2221, 2482
SpeI ACTAGT 1 cut(s) 601
SspDI GGCGCC 2 cut(s) 68, 304
SspMI CTAG 4 cut(s) 47, 602, 1686, 2412
SstI GAGCTC 1 cut(s) 439
StyD4I CCNGG 4 cut(s) 311, 929, 2190, 2555
StyI CCWWGG 4 cut(s) 51, 60, 917, 1561
TaaI ACNGT 6 cut(s) 1016, 1181, 1241, 1749, 1837, 2081
TaiI ACGT 4 cut(s) 228, 557, 1899, 2523
TatI WGTACW 5 cut(s) 716, 850, 1183, 1635, 2019
TauI GCSGC 6 cut(s) 59, 153, 256, 387, 496, 2077
TfiI GAWTC 5 cut(s) 334, 348, 611, 862, 1046
TscAI CASTG 6 cut(s) 292, 822, 1001, 1096, 2084, 2392
TseFI GTSAC 5 cut(s) 283, 773, 1831, 2214, 2393
TseI GCWGC 6 cut(s) 111, 241, 361, 2111, 2366, 2447
Tsp45I GTSAC 5 cut(s) 283, 773, 1831, 2214, 2393
TspGWI ACGGA 2 cut(s) 1497, 2601
TspRI CASTG 6 cut(s) 292, 822, 1001, 1096, 2084, 2392
Tth111I GACNNNGTC 3 cut(s) 122, 281, 1016
Vha464I CTTAAG 1 cut(s) 1388
VneI GTGCAC 2 cut(s) 810, 1230
XagI CCTNNNNNAGG 2 cut(s) 1877, 2195
XapI RAATTY 6 cut(s) 532, 792, 1846, 1970, 2066, 2416
XceI RCATGY 3 cut(s) 1028, 1277, 2447
XcmI CCANNNNNNNNNTGG 2 cut(s) 58, 544
XmiI GTMKAC 3 cut(s) 117, 1902, 1915
XspI CTAG 4 cut(s) 47, 602, 1686, 2412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.