Rh4CG448200

AMP deaminase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0001592
Physical Location & Seq
Reverse (-)
68254719 .. 68261644
6926 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG448200.1

Sequence Viewer

Length: 1953 bp
ATGTATAGTGATTGTAAATTTGAGCTGTCAAATTCTTATGCAGTGCTGCGTACAAGTAACTTTATACAAGAGGTAGATGGAGCTTCAGCACAGATGGGGAGGAATGACCCCTCTCTTGCAAGAATTCTTTCACCGTTAAGTGCACCAATGAATGAGTCAATAACCAAAGAGGATGAAGAAGTACACAGGATGATTCGAGATTGCTTGGATCTGCGTAAGAAGTACCTTTACCGGGAAAATGTTGTTCCATGGAGGGTAGCCAGGCCAGACTCATCAGAGAAGAAAAGCAACCCATATCATTTTGAACCTGTTAAAGCATCAGCTCACTGCTTTAGGATGGAGGACGGTGTCATACATGTTTATGCAAGTGAAAATGACTCTGAAGAGATCTACCCTGTTGCAAGTGCAACAACATTTTTCACTGATCTCCATTATCTTCTTAAAGTTGTGTCTATCGGAAATGTTCGCTCTGTATGCCATCATAGGTTAAGATTTCTTGACGAGAAATACCGCGTACATCATTTACTAAATGAGGGGGAGGAGTTTTTAGCTCAGAAGGGTGCACCCCACCGTGATTTTTACAATGTTAGAAAAGTTGATACACATGTGCATCACTCTGCTTGCATGAACCAGAAGCATCTTCTGAACTTCATCAAGTCAAAACTGAAAAAAGAACCTGATGAGGTTGTCATATTCAGAGATGGAAAATATCTTACACTTAAGGAAGTTTTTGAGAGTTTGGACTTGACAGGGTATGATCTGAATGTTGACTTATTGGATGTTCATGCGGATAAGACTACTTTTCATCGATTTGACAAGTTCAACCTAAAGTATAATCCATGTGGACAGAGCAGACTCAGAGAGATATTCTTAAAGCAAGACAATCTTATCCAAGGACGATTTCTAGCAGAAGTAACAAAGGAAGTTTTGTCAGATCTTGAAGCCATGAAATACCAGATGGCAGAGTACAGGATTTCAGTTTATGGAAGAAAACAAAGTGAGTGGGATCAACTGGCTAGTTGGTTTGTTAACAATGACATTTATAGCGAGAATGTAGTATGGTTAATACAGTTACCACGGTTATACAACATCTACAAGAAGATGGGCATTGTTACCTCTTTCCAAAACATTTTAGATAATGTGTTCATTCCACTCTTTGAAGTCACAGTGGATCCAAATTCACATCCTCAATTACATTTGTTCCTGAAGCAGGTGGTGGGTTTTGACGTTGTAGACGATGAAAGTAGACCAGAAAGGCGTCCAACAAAACACATGCCAACACCATCTGAATGGACTAATGAATTCAATCCTGCATATTCTTATTATGCTTATTACTGCTATGCAAACTTGTACACTCTTAATAAGCTTCGTGAGTCAAAAGGAATGACTACAATAAAATTCCGGCCTCACTGTGGAGAGGCAGGTGATGTTGAACATTTGGCTGCGGGATTTCTTGTATGCCATAATATCTCACATGGGATCAATCTCCGGTACTCTCCAGTTCTGCAATATCTGTATTACCTGGGGCAGGTGGGACTGCTTATGTCACCCTTGAGCAATAATTCTCTTTTCTTAGATTACAAGAAAAACCCTTTTCCTGTATTCTTTCAACGCGGGCTAAATGTCTCGCTTTCAAGCGATGATCCTTTGCTAATTCATTTGACAAAAGAAGCACTGGTGGAAGAATATAGTGTTGCAGCACAGGTATGGAAGCTCAGTGCTTGTGACCTCTGTGAGATAGCTAGAAATTCTGTCTATCATTCTGGATTTTCACATGTAGCAAAGGCACATTGGCTTGGTAGCAAGTATTTCTTGAGAGGCCCTAAAGGAAATGATATACAAAAGACGAACGTTCCCAATTTGAGGATTGCCTTTCGAGAGACAACCTGGAAGGAGGAGATGCAGTATATCTATTCAGGAAAAGCTGAGTTTTCAGAAGAAGTAGATCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130
Pfam Domains
Protein Families
A_deaminase

Protein Analysis

650

Amino Acids

75.55

Weight (kDa)

6.54

Isoelectric Point (pI)

38.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP_deaminase PF19326 58 - 637 8.7e-288 AMP deaminase
A_deaminase PF00962 465 - 591 5.1e-09 Adenosine deaminase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 1201, 1412, 1519
Acc36I ACCTGC 3 cut(s) 1201, 1412, 1519
AccI GTMKAC 2 cut(s) 1233, 1246
AccII CGCG 2 cut(s) 513, 1614
AciI CCGC 4 cut(s) 511, 788, 1445, 1614
AclI AACGTT 1 cut(s) 1851
AclWI GGATC 7 cut(s) 216, 1014, 1166, 1179, 1487, 1637, 1940
AcsI RAATTY 7 cut(s) 17, 31, 123, 1177, 1301, 1397, 1747
AcuI CTGAAG 3 cut(s) 69, 402, 1226
AcyI GRCGYC 1 cut(s) 1258
AfaI GTAC 7 cut(s) 52, 183, 224, 516, 968, 1352, 1493
AfiI CCNNNNNNNGG 5 cut(s) 232, 1210, 1412, 1528, 1863
AflII CTTAAG 1 cut(s) 719
AflIII ACRYGT 3 cut(s) 355, 604, 1774
AgsI TTSAA 8 cut(s) 305, 823, 941, 1160, 1306, 1433, 1610, 1635
AjnI CCWGG 3 cut(s) 260, 1521, 1886
AjuI GAANNNNNNNTTGG 2 cut(s) 885, 917
AluBI AGCT 8 cut(s) 25, 83, 323, 551, 1366, 1714, 1742, 1925
AluI AGCT 8 cut(s) 25, 83, 323, 551, 1366, 1714, 1742, 1925
Alw21I GWGCWC 2 cut(s) 145, 565
Alw26I GTCTC 2 cut(s) 1630, 1874
Alw44I GTGCAC 2 cut(s) 141, 561
AlwI GGATC 7 cut(s) 216, 1014, 1166, 1179, 1487, 1637, 1940
AoxI GGCC 3 cut(s) 263, 1403, 1819
ApaLI GTGCAC 2 cut(s) 141, 561
ApeKI GCWGC 3 cut(s) 46, 1442, 1697
ApoI RAATTY 7 cut(s) 17, 31, 123, 1177, 1301, 1397, 1747
Asp700I GAANNNNTTC 1 cut(s) 127
AspS9I GGNCC 1 cut(s) 1820
AsuC2I CCSGG 1 cut(s) 233
AsuHPI GGTGA 3 cut(s) 123, 1436, 1539
BaeGI GKGCMC 2 cut(s) 145, 565
BaeI ACNNNNGTAYC 2 cut(s) 591, 624
BamHI GGATCC 1 cut(s) 1171
BarI GAAGNNNNNNTAC 2 cut(s) 212, 244
Bbv12I GWGCWC 2 cut(s) 145, 565
BbvI GCAGC 3 cut(s) 33, 1429, 1709
BccI CCATC 8 cut(s) 71, 88, 331, 486, 695, 952, 1096, 1291
BciT130I CCWGG 3 cut(s) 262, 1523, 1888
BcnI CCSGG 1 cut(s) 233
BcoDI GTCTC 2 cut(s) 1630, 1874
BfaI CTAG 3 cut(s) 905, 1017, 1743
BfrI CTTAAG 1 cut(s) 719
BfuAI ACCTGC 3 cut(s) 1201, 1412, 1519
BglII AGATCT 2 cut(s) 387, 934
BisI GCNGC 3 cut(s) 47, 1443, 1698
BlsI GCNGC 3 cut(s) 48, 1444, 1699
Bme1390I CCNGG 4 cut(s) 233, 262, 1523, 1888
BmgT120I GGNCC 1 cut(s) 1820
BmiI GGNNCC 1 cut(s) 1173
BmrFI CCNGG 4 cut(s) 233, 262, 1523, 1888
BmsI GCATC 4 cut(s) 326, 619, 646, 1890
BpmI CTGGAG 1 cut(s) 1482
BpuEI CTTGAG 2 cut(s) 1573, 1834
BpuMI CCSGG 1 cut(s) 233
Bsa29I ATCGAT 1 cut(s) 808
BsaHI GRCGYC 1 cut(s) 1258
BsaJI CCNNGG 4 cut(s) 248, 892, 1076, 1522
BsaWI WCCGGW 1 cut(s) 1488
BsaXI ACNNNNNCTCC 2 cut(s) 1889, 1919
Bsc4I CCNNNNNNNGG 5 cut(s) 232, 1210, 1412, 1528, 1863
Bse1I ACTGG 3 cut(s) 1017, 1499, 1680
BseBI CCWGG 3 cut(s) 262, 1523, 1888
BseCI ATCGAT 1 cut(s) 808
BseDI CCNNGG 4 cut(s) 248, 892, 1076, 1522
BseGI GGATG 5 cut(s) 178, 195, 342, 784, 1183
BseLI CCNNNNNNNGG 5 cut(s) 232, 1210, 1412, 1528, 1863
BseMII CTCAG 4 cut(s) 566, 871, 1729, 1917
BseNI ACTGG 3 cut(s) 1017, 1499, 1680
BseRI GAGGAG 2 cut(s) 554, 1910
BseSI GKGCMC 2 cut(s) 145, 565
BseXI GCAGC 3 cut(s) 33, 1429, 1709
Bsh1236I CGCG 2 cut(s) 513, 1614
BshFI GGCC 3 cut(s) 265, 1405, 1821
BshVI ATCGAT 1 cut(s) 808
BsiHKAI GWGCWC 2 cut(s) 145, 565
BsiSI CCGG 3 cut(s) 232, 1402, 1489
BslFI GGGAC 1 cut(s) 1548
BslI CCNNNNNNNGG 5 cut(s) 232, 1210, 1412, 1528, 1863
BsmAI GTCTC 2 cut(s) 1630, 1874
BsmFI GGGAC 1 cut(s) 1548
BsnI GGCC 3 cut(s) 265, 1405, 1821
Bsp1286I GDGCHC 2 cut(s) 145, 565
Bsp1407I TGTACA 1 cut(s) 1350
Bsp19I CCATGG 1 cut(s) 248
BspACI CCGC 4 cut(s) 511, 788, 1445, 1614
BspANI GGCC 3 cut(s) 265, 1405, 1821
BspCNI CTCAG 4 cut(s) 565, 870, 1728, 1918
BspDI ATCGAT 1 cut(s) 808
BspFNI CGCG 2 cut(s) 513, 1614
BspLI GGNNCC 1 cut(s) 1173
BspMI ACCTGC 3 cut(s) 1201, 1412, 1519
BspPI GGATC 7 cut(s) 216, 1014, 1166, 1179, 1487, 1637, 1940
BspTI CTTAAG 1 cut(s) 719
BsrGI TGTACA 1 cut(s) 1350
BsrI ACTGG 3 cut(s) 1017, 1499, 1680
BssECI CCNNGG 4 cut(s) 248, 892, 1076, 1522
BssNI GRCGYC 1 cut(s) 1258
BssT1I CCWWGG 2 cut(s) 248, 892
Bst2UI CCWGG 3 cut(s) 262, 1523, 1888
Bst4CI ACNGT 7 cut(s) 135, 347, 572, 1071, 1080, 1168, 1412
Bst6I CTCTTC 1 cut(s) 378
BstACI GRCGYC 1 cut(s) 1258
BstAFI CTTAAG 1 cut(s) 719
BstAUI TGTACA 1 cut(s) 1350
BstC8I GCNNGC 2 cut(s) 622, 1616
BstDEI CTNAG 5 cut(s) 552, 857, 1573, 1715, 1926
BstDSI CCRYGG 2 cut(s) 248, 1076
BstENI CCTNNNNNAGG 2 cut(s) 1208, 1526
BstF5I GGATG 5 cut(s) 178, 195, 342, 784, 1183
BstFNI CGCG 2 cut(s) 513, 1614
BstMAI GTCTC 2 cut(s) 1630, 1874
BstMWI GCNNNNNNNGC 1 cut(s) 474
BstNI CCWGG 3 cut(s) 262, 1523, 1888
BstNSI RCATGY 4 cut(s) 359, 608, 1276, 1778
BstSCI CCNGG 4 cut(s) 231, 260, 1521, 1886
BstSLI GKGCMC 2 cut(s) 145, 565
BstUI CGCG 2 cut(s) 513, 1614
BstV1I GCAGC 3 cut(s) 33, 1429, 1709
BstX2I RGATCY 5 cut(s) 208, 387, 934, 1171, 1945
BstXI CCANNNNNNTGG 1 cut(s) 1290
BstYI RGATCY 5 cut(s) 208, 387, 934, 1171, 1945
Bsu15I ATCGAT 1 cut(s) 808
BsuRI GGCC 3 cut(s) 265, 1405, 1821
BsuTUI ATCGAT 1 cut(s) 808
BtgI CCRYGG 2 cut(s) 248, 1076
BtgZI GCGATG 1 cut(s) 1653
BtsCI GGATG 5 cut(s) 178, 195, 342, 784, 1183
BtsI GCAGTG 2 cut(s) 48, 325
BtsIMutI CAGTG 7 cut(s) 48, 325, 420, 1173, 1408, 1673, 1723
BveI ACCTGC 3 cut(s) 1201, 1412, 1519
Cac8I GCNNGC 2 cut(s) 622, 1616
Cfr13I GGNCC 1 cut(s) 1820
ClaI ATCGAT 1 cut(s) 808
CseI GACGC 1 cut(s) 1247
Csp6I GTAC 7 cut(s) 51, 182, 223, 515, 967, 1351, 1492
CspCI CAANNNNNGTGG 2 cut(s) 983, 1018
CviQI GTAC 7 cut(s) 51, 182, 223, 515, 967, 1351, 1492
DdeI CTNAG 5 cut(s) 552, 857, 1573, 1715, 1926
Eam1104I CTCTTC 1 cut(s) 378
EarI CTCTTC 1 cut(s) 378
Eco130I CCWWGG 2 cut(s) 248, 892
Eco57I CTGAAG 3 cut(s) 69, 402, 1226
EcoNI CCTNNNNNAGG 2 cut(s) 1208, 1526
EcoO109I RGGNCCY 1 cut(s) 1820
EcoRI GAATTC 2 cut(s) 123, 1301
EcoRII CCWGG 3 cut(s) 260, 1521, 1886
EcoT14I CCWWGG 2 cut(s) 248, 892
ErhI CCWWGG 2 cut(s) 248, 892
FalI AAGNNNNNCTT 4 cut(s) 870, 902, 1796, 1828
FaqI GGGAC 1 cut(s) 1548
FauI CCCGC 2 cut(s) 1438, 1607
FblI GTMKAC 2 cut(s) 1233, 1246
Fnu4HI GCNGC 3 cut(s) 47, 1443, 1698
FokI GGATG 5 cut(s) 185, 202, 349, 791, 1170
Fsp4HI GCNGC 3 cut(s) 47, 1443, 1698
FspBI CTAG 3 cut(s) 905, 1017, 1743
GluI GCNGC 3 cut(s) 47, 1443, 1698
GsuI CTGGAG 1 cut(s) 1482
HaeIII GGCC 3 cut(s) 265, 1405, 1821
HapII CCGG 3 cut(s) 232, 1402, 1489
HgaI GACGC 1 cut(s) 1247
Hin1I GRCGYC 1 cut(s) 1258
HincII GTYRAC 2 cut(s) 769, 1030
HindII GTYRAC 2 cut(s) 769, 1030
HindIII AAGCTT 1 cut(s) 1364
HinfI GANTC 6 cut(s) 155, 193, 269, 377, 855, 1373
HpaI GTTAAC 1 cut(s) 1030
HpaII CCGG 3 cut(s) 232, 1402, 1489
HphI GGTGA 3 cut(s) 123, 1436, 1539
Hpy166II GTNNAC 9 cut(s) 143, 184, 563, 769, 845, 1030, 1234, 1247, 1353
Hpy188III TCNNGA 9 cut(s) 197, 497, 938, 1204, 1370, 1764, 1813, 1877, 1917
Hpy8I GTNNAC 9 cut(s) 143, 184, 563, 769, 845, 1030, 1234, 1247, 1353
HpyAV CCTTC 2 cut(s) 550, 1885
HpyCH4III ACNGT 7 cut(s) 135, 347, 572, 1071, 1080, 1168, 1412
HpyCH4IV ACGT 2 cut(s) 1227, 1851
HpyF10VI GCNNNNNNNGC 1 cut(s) 474
HpyF3I CTNAG 5 cut(s) 552, 857, 1573, 1715, 1926
HpySE526I ACGT 2 cut(s) 1227, 1851
Hsp92I GRCGYC 1 cut(s) 1258
KspAI GTTAAC 1 cut(s) 1030
LmnI GCTCC 1 cut(s) 80
Lsp1109I GCAGC 3 cut(s) 33, 1429, 1709
LweI GCATC 4 cut(s) 326, 619, 646, 1890
MaeI CTAG 3 cut(s) 905, 1017, 1743
MaeII ACGT 2 cut(s) 1227, 1851
MaeIII GTNAC 7 cut(s) 56, 913, 1071, 1111, 1162, 1545, 1724
MboII GAAGA 9 cut(s) 188, 292, 395, 428, 632, 999, 1111, 1694, 1949
MflI RGATCY 5 cut(s) 208, 387, 934, 1171, 1945
MhlI GDGCHC 2 cut(s) 145, 565
MlyI GAGTC 5 cut(s) 164, 263, 371, 849, 1382
MmeI TCCRAC 1 cut(s) 1286
MroXI GAANNNNTTC 1 cut(s) 127
MseI TTAA 9 cut(s) 137, 312, 441, 488, 720, 872, 1029, 1064, 1359
MslI CAYNNNNRTG 3 cut(s) 360, 1288, 1705
MspCI CTTAAG 1 cut(s) 719
MspI CCGG 3 cut(s) 232, 1402, 1489
MspR9I CCNGG 4 cut(s) 233, 262, 1523, 1888
MvaI CCWGG 3 cut(s) 262, 1523, 1888
MvnI CGCG 2 cut(s) 513, 1614
MwoI GCNNNNNNNGC 1 cut(s) 474
NciI CCSGG 1 cut(s) 233
NcoI CCATGG 1 cut(s) 248
NlaIV GGNNCC 1 cut(s) 1173
NmuCI GTSAC 3 cut(s) 1162, 1545, 1724
NspI RCATGY 4 cut(s) 359, 608, 1276, 1778
PaqCI CACCTGC 3 cut(s) 1201, 1412, 1519
PciI ACATGT 3 cut(s) 355, 604, 1774
PcsI WCGNNNNNNNCGW 1 cut(s) 1233
PdmI GAANNNNTTC 1 cut(s) 127
PfeI GAWTC 1 cut(s) 193
PflFI GACNNNGTC 1 cut(s) 347
PkrI GCNGC 3 cut(s) 48, 1444, 1699
PleI GAGTC 5 cut(s) 163, 263, 371, 849, 1381
PpsI GAGTC 5 cut(s) 163, 263, 371, 849, 1381
PscI ACATGT 3 cut(s) 355, 604, 1774
Psp1406I AACGTT 1 cut(s) 1851
Psp6I CCWGG 3 cut(s) 260, 1521, 1886
PspGI CCWGG 3 cut(s) 260, 1521, 1886
PspN4I GGNNCC 1 cut(s) 1173
PspPI GGNCC 1 cut(s) 1820
PsuI RGATCY 5 cut(s) 208, 387, 934, 1171, 1945
PsyI GACNNNGTC 1 cut(s) 347
RsaI GTAC 7 cut(s) 52, 183, 224, 516, 968, 1352, 1493
RsaNI GTAC 7 cut(s) 51, 182, 223, 515, 967, 1351, 1492
RseI CAYNNNNRTG 3 cut(s) 360, 1288, 1705
SaqAI TTAA 9 cut(s) 137, 312, 441, 488, 720, 872, 1029, 1064, 1359
SatI GCNGC 3 cut(s) 47, 1443, 1698
Sau96I GGNCC 1 cut(s) 1820
SchI GAGTC 5 cut(s) 164, 263, 371, 849, 1382
ScrFI CCNGG 4 cut(s) 233, 262, 1523, 1888
SduI GDGCHC 2 cut(s) 145, 565
SfaNI GCATC 4 cut(s) 326, 619, 646, 1890
SmiMI CAYNNNNRTG 3 cut(s) 360, 1288, 1705
SmlI CTYRAG 3 cut(s) 719, 1552, 1813
SmoI CTYRAG 3 cut(s) 719, 1552, 1813
SsiI CCGC 4 cut(s) 511, 788, 1445, 1614
SspMI CTAG 3 cut(s) 905, 1017, 1743
StyD4I CCNGG 4 cut(s) 231, 260, 1521, 1886
StyI CCWWGG 2 cut(s) 248, 892
TaaI ACNGT 7 cut(s) 135, 347, 572, 1071, 1080, 1168, 1412
TaiI ACGT 2 cut(s) 1230, 1854
TaqI TCGA 3 cut(s) 196, 808, 1876
TatI WGTACW 3 cut(s) 181, 966, 1350
TfiI GAWTC 1 cut(s) 193
Tru1I TTAA 9 cut(s) 137, 312, 441, 488, 720, 872, 1029, 1064, 1359
Tru9I TTAA 9 cut(s) 137, 312, 441, 488, 720, 872, 1029, 1064, 1359
TscAI CASTG 7 cut(s) 48, 332, 427, 1173, 1415, 1680, 1723
TseFI GTSAC 3 cut(s) 1162, 1545, 1724
TseI GCWGC 3 cut(s) 46, 1442, 1697
Tsp45I GTSAC 3 cut(s) 1162, 1545, 1724
TspRI CASTG 7 cut(s) 48, 332, 427, 1173, 1415, 1680, 1723
Tth111I GACNNNGTC 1 cut(s) 347
Vha464I CTTAAG 1 cut(s) 719
VneI GTGCAC 2 cut(s) 141, 561
XagI CCTNNNNNAGG 2 cut(s) 1208, 1526
XapI RAATTY 7 cut(s) 17, 31, 123, 1177, 1301, 1397, 1747
XceI RCATGY 4 cut(s) 359, 608, 1276, 1778
XmiI GTMKAC 2 cut(s) 1233, 1246
XmnI GAANNNNTTC 1 cut(s) 127
XspI CTAG 3 cut(s) 905, 1017, 1743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.