RchiOBHm_Chr4g0445291

AMP deaminase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0001592
Physical Location & Seq
Reverse (-)
65761677 .. 65768604
6928 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41288

Sequence Viewer

Length: 2622 bp
ATGGACTCGTCGTCTTCATCTTCTTCCTCCACCTCTTCAAGCTCCGCTCTCAACCTAGCCATGGCCGCCTTAGTCGGCGCCTCCCTCATGGCCGTCTCCGCCTTCTACATCCACAAACGCAGCGTCGACCAAGTCATCGACCGCCTCATCGAGATCCGCCGCAAGCCGCCGCCGTCTCGCGTCCGCTCCGAAGCCGCCGACGACGACGAGGAAGAAGAAGATTACATCGAAGAAGAAGACGGTCAACAGCAGCAGCTGCACCGAGGGTTTGGCTCTGACCGCGACACCGTGATCGATCGGAAAACGACGCCGTCCAGGTCCTTTGATGAGAAATCGATTCACTCTTACAGAATCTCGTCCTCGCTGCCCAATGCCGATATGAGAAGCGGCCGTTTGATCGACGAGGACGCCAAGTTTGATCCGCTCTCGAATTATCGAGCTCCTAGGTTTTCTTCTTCGGCTGACAGGCTCAATTTCATTCCCTCTGGCCTTCCGCCGCTTCGAACCGATCAAACACACGAGTCTCAGTCTGTCAGTTCCACTACAAGGATGGCTACGTCTATGTCTGTTGGGAGGTTGACGACTCCGAGATCTCACGCCGGACGTGTGGATGATTCCGATGAGGAGGGAACTGAGTATGCAAATGAAGATGATTCTCCTTTCAACTATGAGAATGGAGATGCAAATGACAATTCAGTTTACCAAAATGAAGTGCTGCGTACAAGTAACTTTATACAAGAGGTAGATGGAGCTTCAGCACAGATGGGGAGGAATGACCCCTCTCTTGCAAGAATTCTTTCACCGTTAAGTGCACCAGTGAATGAGTCAATAACCAAAGAGGATGAAGAAGTACACAGGATGATTCGAGATTGCTTGGATCTGCGTAAGAAGTACCTTTACCGGGAAAATGTTGTTCCATGGAGGGTGGCCAGGCCAGACTCATCAGAGAAGAAAAGCAACCCCTATCATTTTGAACCTGTTAAAGCATCAGCTCACTGCTTTAGGATGGAGGACGGTGTCATACATGTTTATGCAAGTGAAAATGACTCTGAAGAGATCTACCCTGTTGCAAGTGCAACAACATTTTTCACTGATCTCCATTATCTTCTTAAAGTTGTGTCTATCGGAAATGTTCGCTCTGTATGCCATCATAGGTTAAGATTTCTTGACGAGAAATACCGTGTACATCATTTACTAAATGAGGGGGAGGAGTTTTTAGCTCAGAAGGGTGCACCCCACCGTGATTTTTACAATGTTAGAAAAGTTGATACACATGTGCATCACTCTGCTTGCATGAACCAGAAGCATCTTCTGAACTTCATCAAGTCAAAACTGAAAAAAGAACCCGATGAGGTTGTCATATTCAGAGATGGAAAATATCTTACACTTAAGGAAGTTTTTGAGAGTTTGGACTTGACAGGGTATGATCTGAATGTTGACTTATTGGATGTTCATGCGGATAAGACTACTTTTCATCGATTTGACAAGTTCAACCTAAAGTATAATCCATGTGGACAGAGTAGACTCAGAGAGATATTCTTAAAGCAAGACAATCTTATCCAAGGACGATTTCTAGCAGAAGTAACAAAGGAAGTTTTGTCAGATCTTGAAGCCATGAAATACCAGATGGCAGAGTACAGGATTTCAGTTTATGGAAGAAAACAAAGTGAGTGGGATCAACTGGCTAGTTGGTTTGTTAACAATGACATTTATAGCGAGAATGTAGTATGGTTAATACAGTTACCACGGTTATACAACATCTACAAGAAGATGGGCATTGTTACCTCTTTCCAAAACATTTTAGATAATGTGTTCATTCCACTCTTTGAAGTCACAGTGGATCCAAATTCACATCCTCAATTACATTTGTTCCTGAAGCAGGTGGTGGGTTTTGACGTTGTAGATGATGAAAGTAGACCAGAAAGGCGTCCAACAAAACACATGCCAACACCATCTGAATGGACTAATGAATTCAATCCTGCATATTCTTATTATGCTTATTACTGCTATGCAAACTTGTACACTCTTAATAAGCTTCGTGAGTCAAAAGGAATGACTACAATAAAATTCCGGCCTCACTGTGGAGAGGCGGGTGATGTTGAACATTTGGCTGCGGGATTTCTTGTATGCCATAATATCTCACATGGGATCAATCTCCGGTACTCTCCAGTTCTGCAATATCTGTATTACCTTGGGCAGGTGGGACTGCTTATGTCACCCTTGAGCAATAATTCTCTTTTCTTAGATTACAAGAAAAACCCGTTTCCTGTATTCTTTCAACGCGGGCTAAATGTCTCGCTTTCAAGCGATGATCCTTTGCTAATTCATTTGACAAAAGAAGCACTGGTGGAAGAATATAGTGTTGCAGCACAGGTATGGAAGCTCAGTGCTTGTGACCTCTGTGAGATAGCTAGAAATTCTGTCTATCATTCTGGATTTTCACATGTAGCAAAGGCACATTGGCTTGGTAGCAAGTATTTCTTGAGAGGCCCTAAAGGAAATGATATACAAAAGACGAACGTTCCGAATTTGAGGATTGCCTTTCGAGAGACAACCTGGAAGGAGGAGATGCAGTATATCTATTCAGGAAAAGCTGAGTTTTCAGAAGAAGTAGATCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130
Pfam Domains
Protein Families
A_deaminase

Protein Analysis

873

Amino Acids

100.13

Weight (kDa)

5.84

Isoelectric Point (pI)

47.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP_deaminase PF19326 281 - 860 1.9e-287 AMP deaminase
A_deaminase PF00962 688 - 814 8.1e-09 Adenosine deaminase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1870, 2188
Acc36I ACCTGC 2 cut(s) 1870, 2188
AccB1I GGYRCC 1 cut(s) 77
AccBSI CCGCTC 3 cut(s) 47, 186, 424
AccI GTMKAC 3 cut(s) 126, 1522, 1915
AccII CGCG 3 cut(s) 180, 282, 2283
AclI AACGTT 1 cut(s) 2520
AclWI GGATC 9 cut(s) 148, 413, 885, 1683, 1835, 1848, 2156, 2306, 2609
AcoI YGGCCR 4 cut(s) 63, 90, 388, 927
AcsI RAATTY 6 cut(s) 792, 1846, 1970, 2066, 2416, 2527
AcuI CTGAAG 3 cut(s) 738, 1071, 1895
AcyI GRCGYC 4 cut(s) 78, 308, 408, 1927
AfaI GTAC 7 cut(s) 721, 852, 893, 1185, 1637, 2021, 2162
AfiI CCNNNNNNNGG 6 cut(s) 61, 546, 901, 1879, 2081, 2197
AflII CTTAAG 1 cut(s) 1388
AflIII ACRYGT 4 cut(s) 604, 1024, 1273, 2443
AhdI GACNNNNNGTC 1 cut(s) 10
AjiI CACGTC 1 cut(s) 605
AjnI CCWGG 3 cut(s) 314, 929, 2555
AjuI GAANNNNNNNTTGG 2 cut(s) 1554, 1586
Alw21I GWGCWC 3 cut(s) 442, 814, 1234
Alw26I GTCTC 5 cut(s) 100, 180, 528, 2299, 2543
Alw44I GTGCAC 2 cut(s) 810, 1230
AlwI GGATC 9 cut(s) 148, 413, 885, 1683, 1835, 1848, 2156, 2306, 2609
AlwNI CAGNNNCTG 1 cut(s) 256
AoxI GGCC 8 cut(s) 63, 90, 388, 487, 927, 932, 2072, 2488
ApaLI GTGCAC 2 cut(s) 810, 1230
ApeKI GCWGC 8 cut(s) 120, 250, 253, 256, 364, 715, 2111, 2366
ApoI RAATTY 6 cut(s) 792, 1846, 1970, 2066, 2416, 2527
ArsI GACNNNNNNTTYG 4 cut(s) 108, 140, 398, 430
Asp700I GAANNNNTTC 1 cut(s) 796
AspA2I CCTAGG 1 cut(s) 443
AspLEI GCGC 1 cut(s) 80
AspS9I GGNCC 2 cut(s) 318, 2489
AsuC2I CCSGG 1 cut(s) 902
AsuHPI GGTGA 3 cut(s) 792, 2105, 2208
AsuII TTCGAA 1 cut(s) 502
AvaII GGWCC 1 cut(s) 318
AvrII CCTAGG 1 cut(s) 443
BaeGI GKGCMC 2 cut(s) 814, 1234
BaeI ACNNNNGTAYC 2 cut(s) 1260, 1293
BalI TGGCCA 1 cut(s) 929
BamHI GGATCC 1 cut(s) 1840
BanI GGYRCC 1 cut(s) 77
BanII GRGCYC 1 cut(s) 442
BarI GAAGNNNNNNTAC 2 cut(s) 881, 913
BauI CACGAG 1 cut(s) 518
BbsI GAAGAC 2 cut(s) 6, 243
Bbv12I GWGCWC 3 cut(s) 442, 814, 1234
BbvI GCAGC 8 cut(s) 132, 243, 262, 265, 351, 702, 2098, 2378
BccI CCATC 9 cut(s) 544, 740, 757, 1000, 1155, 1364, 1621, 1765, 1960
BceAI ACGGC 4 cut(s) 77, 157, 295, 375
BciT130I CCWGG 3 cut(s) 316, 931, 2557
BcnI CCSGG 1 cut(s) 902
BcoDI GTCTC 5 cut(s) 100, 180, 528, 2299, 2543
BfaI CTAG 5 cut(s) 56, 444, 1574, 1686, 2412
BfoI RGCGCY 1 cut(s) 81
BfrI CTTAAG 1 cut(s) 1388
BfuAI ACCTGC 2 cut(s) 1870, 2188
BglII AGATCT 3 cut(s) 590, 1056, 1603
BlnI CCTAGG 1 cut(s) 443
Bme1390I CCNGG 4 cut(s) 316, 902, 931, 2557
Bme18I GGWCC 1 cut(s) 318
BmeRI GACNNNNNGTC 1 cut(s) 10
BmgBI CACGTC 1 cut(s) 605
BmgT120I GGNCC 2 cut(s) 318, 2489
BmiI GGNNCC 2 cut(s) 79, 1842
BmrFI CCNGG 4 cut(s) 316, 902, 931, 2557
BmsI GCATC 5 cut(s) 670, 995, 1288, 1315, 2559
BpiI GAAGAC 2 cut(s) 6, 243
BpmI CTGGAG 1 cut(s) 2151
Bpu14I TTCGAA 1 cut(s) 502
BpuEI CTTGAG 2 cut(s) 2242, 2503
BpuMI CCSGG 1 cut(s) 902
Bsa29I ATCGAT 3 cut(s) 294, 335, 1477
BsaHI GRCGYC 4 cut(s) 78, 308, 408, 1927
BsaJI CCNNGG 7 cut(s) 60, 262, 443, 917, 1561, 1745, 2191
BsaWI WCCGGW 1 cut(s) 2157
BsaXI ACNNNNNCTCC 2 cut(s) 2558, 2588
Bsc4I CCNNNNNNNGG 6 cut(s) 61, 546, 901, 1879, 2081, 2197
Bse1I ACTGG 4 cut(s) 815, 1686, 2168, 2349
BseBI CCWGG 3 cut(s) 316, 931, 2557
BseCI ATCGAT 3 cut(s) 294, 335, 1477
BseDI CCNNGG 7 cut(s) 60, 262, 443, 917, 1561, 1745, 2191
BseGI GGATG 8 cut(s) 108, 555, 616, 847, 864, 1011, 1453, 1852
BseLI CCNNNNNNNGG 6 cut(s) 61, 546, 901, 1879, 2081, 2197
BseMII CTCAG 6 cut(s) 539, 624, 1235, 1540, 2398, 2586
BseNI ACTGG 4 cut(s) 815, 1686, 2168, 2349
BseRI GAGGAG 3 cut(s) 638, 1223, 2579
BseSI GKGCMC 2 cut(s) 814, 1234
BseX3I CGGCCG 1 cut(s) 388
BseXI GCAGC 8 cut(s) 132, 243, 262, 265, 351, 702, 2098, 2378
BsgI GTGCAG 1 cut(s) 242
Bsh1236I CGCG 3 cut(s) 180, 282, 2283
Bsh1285I CGRYCG 3 cut(s) 142, 298, 391
BshFI GGCC 8 cut(s) 65, 92, 390, 489, 929, 934, 2074, 2490
BshNI GGYRCC 1 cut(s) 77
BshVI ATCGAT 3 cut(s) 294, 335, 1477
BsiEI CGRYCG 3 cut(s) 142, 298, 391
BsiHKAI GWGCWC 3 cut(s) 442, 814, 1234
BsiSI CCGG 4 cut(s) 600, 901, 2071, 2158
BslFI GGGAC 1 cut(s) 2217
BslI CCNNNNNNNGG 6 cut(s) 61, 546, 901, 1879, 2081, 2197
BsmAI GTCTC 5 cut(s) 100, 180, 528, 2299, 2543
BsmBI CGTCTC 2 cut(s) 100, 180
BsmFI GGGAC 1 cut(s) 2217
BsnI GGCC 8 cut(s) 65, 92, 390, 489, 929, 934, 2074, 2490
Bsp119I TTCGAA 1 cut(s) 502
Bsp1286I GDGCHC 3 cut(s) 442, 814, 1234
Bsp1407I TGTACA 2 cut(s) 1183, 2019
Bsp19I CCATGG 2 cut(s) 60, 917
BspANI GGCC 8 cut(s) 65, 92, 390, 489, 929, 934, 2074, 2490
BspCNI CTCAG 6 cut(s) 538, 625, 1234, 1539, 2397, 2587
BspDI ATCGAT 3 cut(s) 294, 335, 1477
BspFNI CGCG 3 cut(s) 180, 282, 2283
BspLI GGNNCC 2 cut(s) 79, 1842
BspMI ACCTGC 2 cut(s) 1870, 2188
BspPI GGATC 9 cut(s) 148, 413, 885, 1683, 1835, 1848, 2156, 2306, 2609
BspT104I TTCGAA 1 cut(s) 502
BspT107I GGYRCC 1 cut(s) 77
BspTI CTTAAG 1 cut(s) 1388
BsrBI CCGCTC 3 cut(s) 47, 186, 424
BsrGI TGTACA 2 cut(s) 1183, 2019
BsrI ACTGG 4 cut(s) 815, 1686, 2168, 2349
BssECI CCNNGG 7 cut(s) 60, 262, 443, 917, 1561, 1745, 2191
BssNI GRCGYC 4 cut(s) 78, 308, 408, 1927
BssSI CACGAG 1 cut(s) 518
BssT1I CCWWGG 5 cut(s) 60, 443, 917, 1561, 2191
Bst2BI CACGAG 1 cut(s) 518
Bst2UI CCWGG 3 cut(s) 316, 931, 2557
Bst6I CTCTTC 2 cut(s) 40, 1047
BstACI GRCGYC 4 cut(s) 78, 308, 408, 1927
BstAFI CTTAAG 1 cut(s) 1388
BstAPI GCANNNNNTGC 1 cut(s) 256
BstAUI TGTACA 2 cut(s) 1183, 2019
BstBI TTCGAA 1 cut(s) 502
BstC8I GCNNGC 3 cut(s) 164, 1291, 2285
BstDEI CTNAG 8 cut(s) 70, 525, 633, 1221, 1526, 2242, 2384, 2595
BstDSI CCRYGG 3 cut(s) 60, 917, 1745
BstENI CCTNNNNNAGG 2 cut(s) 1877, 2195
BstF5I GGATG 8 cut(s) 108, 555, 616, 847, 864, 1011, 1453, 1852
BstFNI CGCG 3 cut(s) 180, 282, 2283
BstH2I RGCGCY 1 cut(s) 81
BstHHI GCGC 1 cut(s) 80
BstMAI GTCTC 5 cut(s) 100, 180, 528, 2299, 2543
BstMCI CGRYCG 3 cut(s) 142, 298, 391
BstMWI GCNNNNNNNGC 5 cut(s) 65, 98, 256, 279, 1143
BstNI CCWGG 3 cut(s) 316, 931, 2557
BstNSI RCATGY 4 cut(s) 1028, 1277, 1945, 2447
BstSCI CCNGG 4 cut(s) 314, 900, 929, 2555
BstSLI GKGCMC 2 cut(s) 814, 1234
BstUI CGCG 3 cut(s) 180, 282, 2283
BstV1I GCAGC 8 cut(s) 132, 243, 262, 265, 351, 702, 2098, 2378
BstV2I GAAGAC 2 cut(s) 6, 243
BstX2I RGATCY 7 cut(s) 153, 590, 877, 1056, 1603, 1840, 2614
BstXI CCANNNNNNTGG 1 cut(s) 1959
BstYI RGATCY 7 cut(s) 153, 590, 877, 1056, 1603, 1840, 2614
BstZI CGGCCG 1 cut(s) 388
Bsu15I ATCGAT 3 cut(s) 294, 335, 1477
BsuRI GGCC 8 cut(s) 65, 92, 390, 489, 929, 934, 2074, 2490
BsuTUI ATCGAT 3 cut(s) 294, 335, 1477
BtgI CCRYGG 3 cut(s) 60, 917, 1745
BtgZI GCGATG 1 cut(s) 2322
BtrI CACGTC 1 cut(s) 605
BtsCI GGATG 8 cut(s) 108, 555, 616, 847, 864, 1011, 1453, 1852
BtsI GCAGTG 1 cut(s) 994
BtsIMutI CAGTG 7 cut(s) 822, 994, 1089, 1842, 2077, 2342, 2392
BveI ACCTGC 2 cut(s) 1870, 2188
Cac8I GCNNGC 3 cut(s) 164, 1291, 2285
CaiI CAGNNNCTG 1 cut(s) 256
CfoI GCGC 1 cut(s) 80
Cfr13I GGNCC 2 cut(s) 318, 2489
ClaI ATCGAT 3 cut(s) 294, 335, 1477
CseI GACGC 5 cut(s) 112, 169, 316, 416, 1916
Csp6I GTAC 7 cut(s) 720, 851, 892, 1184, 1636, 2020, 2161
CspCI CAANNNNNGTGG 2 cut(s) 1652, 1687
CviQI GTAC 7 cut(s) 720, 851, 892, 1184, 1636, 2020, 2161
DdeI CTNAG 8 cut(s) 70, 525, 633, 1221, 1526, 2242, 2384, 2595
DinI GGCGCC 1 cut(s) 79
DriI GACNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 4 cut(s) 63, 90, 388, 927
EagI CGGCCG 1 cut(s) 388
Eam1104I CTCTTC 2 cut(s) 40, 1047
Eam1105I GACNNNNNGTC 1 cut(s) 10
EarI CTCTTC 2 cut(s) 40, 1047
EciI GGCGGA 3 cut(s) 88, 146, 483
Ecl136II GAGCTC 1 cut(s) 440
EclXI CGGCCG 1 cut(s) 388
Eco130I CCWWGG 5 cut(s) 60, 443, 917, 1561, 2191
Eco24I GRGCYC 1 cut(s) 442
Eco47I GGWCC 1 cut(s) 318
Eco52I CGGCCG 1 cut(s) 388
Eco53kI GAGCTC 1 cut(s) 440
Eco57I CTGAAG 3 cut(s) 738, 1071, 1895
EcoICRI GAGCTC 1 cut(s) 440
EcoNI CCTNNNNNAGG 2 cut(s) 1877, 2195
EcoO109I RGGNCCY 2 cut(s) 318, 2489
EcoRI GAATTC 2 cut(s) 792, 1970
EcoRII CCWGG 3 cut(s) 314, 929, 2555
EcoT14I CCWWGG 5 cut(s) 60, 443, 917, 1561, 2191
EcoT38I GRGCYC 1 cut(s) 442
EgeI GGCGCC 1 cut(s) 79
EheI GGCGCC 1 cut(s) 79
ErhI CCWWGG 5 cut(s) 60, 443, 917, 1561, 2191
Esp3I CGTCTC 2 cut(s) 100, 180
FalI AAGNNNNNCTT 4 cut(s) 1539, 1571, 2465, 2497
FaqI GGGAC 1 cut(s) 2217
FauI CCCGC 3 cut(s) 2083, 2107, 2276
FblI GTMKAC 3 cut(s) 126, 1522, 1915
FokI GGATG 8 cut(s) 95, 562, 623, 854, 871, 1018, 1460, 1839
FriOI GRGCYC 1 cut(s) 442
FspBI CTAG 5 cut(s) 56, 444, 1574, 1686, 2412
GlaI GCGC 1 cut(s) 79
GsuI CTGGAG 1 cut(s) 2151
HaeII RGCGCY 1 cut(s) 81
HaeIII GGCC 8 cut(s) 65, 92, 390, 489, 929, 934, 2074, 2490
HapII CCGG 4 cut(s) 600, 901, 2071, 2158
HgaI GACGC 5 cut(s) 112, 169, 316, 416, 1916
HhaI GCGC 1 cut(s) 80
Hin1I GRCGYC 4 cut(s) 78, 308, 408, 1927
Hin6I GCGC 1 cut(s) 78
HinP1I GCGC 1 cut(s) 78
HincII GTYRAC 5 cut(s) 127, 245, 579, 1438, 1699
HindII GTYRAC 5 cut(s) 127, 245, 579, 1438, 1699
HindIII AAGCTT 1 cut(s) 2033
HpaI GTTAAC 1 cut(s) 1699
HpaII CCGG 4 cut(s) 600, 901, 2071, 2158
HphI GGTGA 3 cut(s) 792, 2105, 2208
Hpy99I CGWCG 7 cut(s) 13, 128, 203, 206, 209, 310, 404
HpyAV CCTTC 4 cut(s) 112, 500, 1219, 2554
HpyCH4IV ACGT 4 cut(s) 557, 604, 1896, 2520
HpyF10VI GCNNNNNNNGC 5 cut(s) 65, 98, 256, 279, 1143
HpyF3I CTNAG 8 cut(s) 70, 525, 633, 1221, 1526, 2242, 2384, 2595
HpySE526I ACGT 4 cut(s) 557, 604, 1896, 2520
Hsp92I GRCGYC 4 cut(s) 78, 308, 408, 1927
HspAI GCGC 1 cut(s) 78
KasI GGCGCC 1 cut(s) 77
KspAI GTTAAC 1 cut(s) 1699
LmnI GCTCC 4 cut(s) 47, 191, 445, 749
Lsp1109I GCAGC 8 cut(s) 132, 243, 262, 265, 351, 702, 2098, 2378
LweI GCATC 5 cut(s) 670, 995, 1288, 1315, 2559
MaeI CTAG 5 cut(s) 56, 444, 1574, 1686, 2412
MaeII ACGT 4 cut(s) 557, 604, 1896, 2520
MaeIII GTNAC 7 cut(s) 725, 1582, 1740, 1780, 1831, 2214, 2393
MbiI CCGCTC 3 cut(s) 47, 186, 424
MflI RGATCY 7 cut(s) 153, 590, 877, 1056, 1603, 1840, 2614
MhlI GDGCHC 3 cut(s) 442, 814, 1234
MlsI TGGCCA 1 cut(s) 929
MluNI TGGCCA 1 cut(s) 929
Mly113I GGCGCC 1 cut(s) 78
MlyI GAGTC 7 cut(s) 530, 577, 833, 932, 1040, 1518, 2051
MmeI TCCRAC 1 cut(s) 1955
Mox20I TGGCCA 1 cut(s) 929
MroXI GAANNNNTTC 1 cut(s) 796
MscI TGGCCA 1 cut(s) 929
MseI TTAA 9 cut(s) 806, 981, 1110, 1157, 1389, 1541, 1698, 1733, 2028
MslI CAYNNNNRTG 3 cut(s) 1029, 1957, 2374
Msp20I TGGCCA 1 cut(s) 929
MspA1I CMGCKG 1 cut(s) 256
MspCI CTTAAG 1 cut(s) 1388
MspI CCGG 4 cut(s) 600, 901, 2071, 2158
MspR9I CCNGG 4 cut(s) 316, 902, 931, 2557
MvaI CCWGG 3 cut(s) 316, 931, 2557
MvnI CGCG 3 cut(s) 180, 282, 2283
MwoI GCNNNNNNNGC 5 cut(s) 65, 98, 256, 279, 1143
NarI GGCGCC 1 cut(s) 78
NciI CCSGG 1 cut(s) 902
NcoI CCATGG 2 cut(s) 60, 917
NlaIV GGNNCC 2 cut(s) 79, 1842
NmuCI GTSAC 3 cut(s) 1831, 2214, 2393
NspI RCATGY 4 cut(s) 1028, 1277, 1945, 2447
NspV TTCGAA 1 cut(s) 502
PaqCI CACCTGC 2 cut(s) 1870, 2188
PciI ACATGT 3 cut(s) 1024, 1273, 2443
PcsI WCGNNNNNNNCGW 1 cut(s) 2522
PdmI GAANNNNTTC 1 cut(s) 796
PfeI GAWTC 5 cut(s) 337, 351, 614, 653, 862
PflFI GACNNNGTC 3 cut(s) 131, 310, 1016
Ple19I CGATCG 1 cut(s) 298
PleI GAGTC 7 cut(s) 529, 577, 832, 932, 1040, 1518, 2050
PluTI GGCGCC 1 cut(s) 81
PpsI GAGTC 7 cut(s) 529, 577, 832, 932, 1040, 1518, 2050
PpuMI RGGWCCY 1 cut(s) 318
PscI ACATGT 3 cut(s) 1024, 1273, 2443
Psp124BI GAGCTC 1 cut(s) 442
Psp1406I AACGTT 1 cut(s) 2520
Psp5II RGGWCCY 1 cut(s) 318
Psp6I CCWGG 3 cut(s) 314, 929, 2555
PspGI CCWGG 3 cut(s) 314, 929, 2555
PspN4I GGNNCC 2 cut(s) 79, 1842
PspPI GGNCC 2 cut(s) 318, 2489
PspPPI RGGWCCY 1 cut(s) 318
PstNI CAGNNNCTG 1 cut(s) 256
PsuI RGATCY 7 cut(s) 153, 590, 877, 1056, 1603, 1840, 2614
PsyI GACNNNGTC 3 cut(s) 131, 310, 1016
PvuI CGATCG 1 cut(s) 298
PvuII CAGCTG 1 cut(s) 256
RsaI GTAC 7 cut(s) 721, 852, 893, 1185, 1637, 2021, 2162
RsaNI GTAC 7 cut(s) 720, 851, 892, 1184, 1636, 2020, 2161
RseI CAYNNNNRTG 3 cut(s) 1029, 1957, 2374
SacI GAGCTC 1 cut(s) 442
SalI GTCGAC 1 cut(s) 125
SaqAI TTAA 9 cut(s) 806, 981, 1110, 1157, 1389, 1541, 1698, 1733, 2028
Sau96I GGNCC 2 cut(s) 318, 2489
SchI GAGTC 7 cut(s) 530, 577, 833, 932, 1040, 1518, 2051
ScrFI CCNGG 4 cut(s) 316, 902, 931, 2557
SduI GDGCHC 3 cut(s) 442, 814, 1234
SfaNI GCATC 5 cut(s) 670, 995, 1288, 1315, 2559
SfoI GGCGCC 1 cut(s) 79
SfuI TTCGAA 1 cut(s) 502
SinI GGWCC 1 cut(s) 318
SmiMI CAYNNNNRTG 3 cut(s) 1029, 1957, 2374
SmlI CTYRAG 3 cut(s) 1388, 2221, 2482
SmoI CTYRAG 3 cut(s) 1388, 2221, 2482
SspDI GGCGCC 1 cut(s) 77
SspMI CTAG 5 cut(s) 56, 444, 1574, 1686, 2412
SstI GAGCTC 1 cut(s) 442
StyD4I CCNGG 4 cut(s) 314, 900, 929, 2555
StyI CCWWGG 5 cut(s) 60, 443, 917, 1561, 2191
TaiI ACGT 4 cut(s) 560, 607, 1899, 2523
TatI WGTACW 4 cut(s) 850, 1183, 1635, 2019
TauI GCSGC 7 cut(s) 68, 162, 169, 172, 197, 390, 499
TfiI GAWTC 5 cut(s) 337, 351, 614, 653, 862
Tru1I TTAA 9 cut(s) 806, 981, 1110, 1157, 1389, 1541, 1698, 1733, 2028
Tru9I TTAA 9 cut(s) 806, 981, 1110, 1157, 1389, 1541, 1698, 1733, 2028
TscAI CASTG 7 cut(s) 822, 1001, 1096, 1842, 2084, 2349, 2392
TseFI GTSAC 3 cut(s) 1831, 2214, 2393
TseI GCWGC 8 cut(s) 120, 250, 253, 256, 364, 715, 2111, 2366
Tsp45I GTSAC 3 cut(s) 1831, 2214, 2393
TspRI CASTG 7 cut(s) 822, 1001, 1096, 1842, 2084, 2349, 2392
Tth111I GACNNNGTC 3 cut(s) 131, 310, 1016
Vha464I CTTAAG 1 cut(s) 1388
VneI GTGCAC 2 cut(s) 810, 1230
VpaK11BI GGWCC 1 cut(s) 318
XagI CCTNNNNNAGG 2 cut(s) 1877, 2195
XapI RAATTY 6 cut(s) 792, 1846, 1970, 2066, 2416, 2527
XceI RCATGY 4 cut(s) 1028, 1277, 1945, 2447
XcmI CCANNNNNNNNNTGG 1 cut(s) 547
XmaJI CCTAGG 1 cut(s) 443
XmiI GTMKAC 3 cut(s) 126, 1522, 1915
XmnI GAANNNNTTC 1 cut(s) 796
XspI CTAG 5 cut(s) 56, 444, 1574, 1686, 2412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.