Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001592

Physical Location & Seq

Genomic Coordinates Forward (+)

10320119 .. 10327477

Gene Structure 7359 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ42902

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

ATGGAGTCGTACGCGGTACATTTGGCCATGGCGGCTCTCGTCGGGGCGTCGCTAGTGGCCGTCTCAGCTTACTACATGCACCGGAAGACCCTAACTCAGCTGCTGGAGTTTGCGAAGACGGTGGAGAGGGAGAGGGAGCGGGAGGAGAACTCCGATGGAGGCGGCGGCGGCGGGGACTCGCCGCAGCACATGAAGAAGCGTAAGGGACACGGGCGGCGCAAAGGCGGCGGGTATTACCGGCGTGGCTCGGCCTCTTTGCCGGACGTTACGGCGATTTCCGGCGGGGTTGACGGGAATGGAATGGTGGACGGTATTCCGGCTGGGTTGCCGAGGCTGCACACGCTTCCGGAAGGAAAATCGGCTCAGCCGGTGGGTTCAGCTAAGAGAACTAGTATCAGACCTATTTCTCCCAAGTCTCCAGTTGCAAGCGCTAGCGCCTTTGAGAGCGTTGAAGGTTCGGATGATGAAGATAATTTGACTGACAATGCTAAGGGGCCAGATTTACCAAACCATGTTACTGCCAATGGAGAGCAAATTGCTATAGCTGCTTCAAGTATGATTAGGTCCCATTCTGTATCTGGTGATCTGCATGGTGTCCAGCCTGATCCAATTGCAGCTGACATTCTAAGGAAAGAGCCTGAGCAAGAAACTTTTGCACGACTAAAAATTACTCCTACTGAAGTACCATCACCTGATGAAATAGAGGTTTATGTGGTTCTTCAAGAATGCCTTGAAATGCGAAAGAGATATGTATTCAGTGAGGCAGTTGCTCCATGGGAGAGGGAAGTTATATCTGATCCCAGTACCCCAAAGCCTAACCCAGAACCATTTTTCTACGCTTCTGAGGGAAAGTCTGATCATCATTTTGAGATGCAAGATGGAGTAATTCACGTGTATCCACATAAAGATTCAAAAGAAGAGCTTTATCCTGTTGCTGATGCAACTACCTTTTTCACTGACCTTCACCACATACTTAGAGTTATAGCAGCAGGGAATATCAGAACTTTATGCCATCATCGCTTGAATCTTTTGGAACAAAAATTCAATCTTCACTTGATGCTTAATGCGGATAAGGAATTTCTGGCCCAGAAAAGTGCTCCACATCGTGACTTTTATAATGTTAGGAAAGTTGATACCCATGTTCATCACTCGGCATGCATGAACCAGAAGCATCTTTTGAGGTTTATAAAGTCAAAGTTGAGGAAGGAGCCTGATGAGGTTGTAATATTTCGAGATGGCACCTATTTGACCTTGAGAGAAGTTTTTGAGAGTCTGGATTTGACTGGGTACGACCTGAATGTGGACCTTTTGGATGTTCATGCAGACAAAAGCACATTTCATCGTTTTGATAAGTTCAATCTCAAGTACAACCCCTGTGGTCAAAGTAGGCTCAGGGAGATTTTCCTTAAGCAGGATAATCTTATCCAAGGCCGTTTCCTTGCTGAGCTGACAAAGCAAGTGTTCTCTGATCTTTCTGCCAGTAAATATCAGATGGCTGAGTACAGAGTATCAATATATGGCAGGAAGCAAAGTGAGTGGGACCAAATGGCTAGTTGGATAGTGAACAATGAATTGTACAGTGAGAATGTTGTATGGTTGATACAGCTGCCACGGCTGTACAATATATACAAGGAAATGGGGATAGTGACATCATTTCAAAACATTCTTGACAATATCTTTATACCGCTGTTTGAGGTTACCATAAATCCAGATTCCCATCCACAGTTGCATGTTTTTCTGAAACAGGTTGTTGGGTTAGATTTGGTCGATGATGAAAGCAAACCTGAAAGACGGCCCACAAAACACATGCCAACTCCAGCACAATGGACAAATGTTTTCAATCCTGCATTTTCGTACTATGTGTACTATTGTTATGCTAATCTCTACACATTAAACAAGCTTCGTGAATCGAAGGGCATGACAACCATCAAATTCCGTCCACATTCTGGGGAGGCTGGGGACATTGACCACCTTGCTGCAACGTTTCTTACTGCGACTAACATCGCACACGGAATCAATTTGAGGAAGTCTCCTGTGCTTCAATATCTGTATTATTTAGCTCAGATTGGTCTGGCTATGTCACCCCTGAGCAACAATTCATTGTTCTTGGACTACCATCGCAACCCTTTTCCCATATTTTTCTTACGGGGTCTTAATGTCTCTCTCTCTACTGATGATCCTCTTCAAATCCACTTAACGAAAGAACCCTTGGTAGAAGAATATAGTATAGCTGCTTCGGTATGGAAATTGAGTTCATGTGATCTATGTGAAATTGCCCGTAATTCAGTTTACCAGTCAGGTTTCTCACATGCTCTGAAGTCACACTGGATTGGGAGAGAGTATTACAAGAGAGGACCAGATGGAAATGATATCCACAAAACAAACGTTCCTCATATCCGGGTGGAATTCCGGGAAACGATCTGGAGGGAGGAGATGAAACAGGTTTATATTGGCAAGGCTATTATCCCCAGAGAAGTTGACAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005829 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0010033 GO:0010154 GO:0016020 GO:0016021 GO:0019867 GO:0019899 GO:0019900 GO:0019901 GO:0022414 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032501 GO:0032502 GO:0032592 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043424 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0097305 GO:0098573 GO:0098588 GO:0098805 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130

Pfam Domains

Protein Families

A_deaminase

Protein Analysis

828

Amino Acids

94.05

Weight (kDa)

6.54

Isoelectric Point (pI)

45.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP_deaminase	PF19326	224 - 815	0.0	AMP deaminase
A_deaminase	PF00962	643 - 769	2.8e-09	Adenosine deaminase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38280 AT2G38280
fragaria_vesca	FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200
malus_domestica	MD00G1061700.v1.1 MD12G1171800.v1.1 MD13G1080600.v1.1
prunus_persica	Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.6G280000_v2.0.a1
pyrus_communis	pycom04g14260 pycom13g06970
rosa_chinensis	RchiOBHm_Chr3g0462681 RchiOBHm_Chr4g0445291 RchiOBHm_Chr6g0271931
rosa_laevigata	RLG00000005751 RLG00000024843
rosa_multiflora	Rmu_sc0000050.1_g000023 Rmu_sc0011057.1_g000004
rosa_roxburghii	Rroxscaffold_5G00385800 Rroxscaffold_6G00417300
rosa_rugosa	Rorug03G0058500 Rorug04G0360200 Rorug04G0360300
rosa_samantha	Rh3AG116500 Rh3BG120100 Rh3CG123300 Rh3DG122100 Rh4AG421600 Rh4BG433500 Rh4CG448200 Rh4DG429500
rosa_wichuraiana	Rw3G009860 Rw4G036160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1116, 1187
AccB1I	GGYRCC	1 cut(s)	1238
AccB7I	CCANNNNNTGG	1 cut(s)	1946
AccBSI	CCGCTC	1 cut(s)	139
AccII	CGCG	1 cut(s)	14
AccIII	TCCGGA	1 cut(s)	346
AclI	AACGTT	2 cut(s)	1982, 2385
AclWI	GGATC	3 cut(s)	599, 791, 2171
AcoI	YGGCCR	2 cut(s)	24, 57
AcsI	RAATTY	4 cut(s)	1040, 1076, 1931, 2405
AcuI	CTGAAG	2 cut(s)	699, 2336
AcvI	CACGTG	1 cut(s)	892
AcyI	GRCGYC	1 cut(s)	47
AdeI	CACNNNGTG	1 cut(s)	1106
AfeI	AGCGCT	1 cut(s)	430
AfiI	CCNNNNNNNGG	3 cut(s)	1300, 1411, 1946
AflII	CTTAAG	1 cut(s)	1406
AflIII	ACRYGT	1 cut(s)	891
AhlI	ACTAGT	1 cut(s)	389
AjuI	GAANNNNNNNTTGG	2 cut(s)	2192, 2224
AloI	GAACNNNNNNTCC	2 cut(s)	2236, 2268
Alw21I	GWGCWC	1 cut(s)	1099
Alw26I	GTCTC	4 cut(s)	67, 420, 2034, 2164
AlwI	GGATC	3 cut(s)	599, 791, 2171
AlwNI	CAGNNNCTG	1 cut(s)	103
Aor13HI	TCCGGA	1 cut(s)	346
Aor51HI	AGCGCT	1 cut(s)	430
AoxI	GGCC	7 cut(s)	24, 57, 249, 494, 1083, 1429, 1793
ApeKI	GCWGC	9 cut(s)	100, 184, 334, 545, 614, 986, 1606, 1976, 2231
ApoI	RAATTY	4 cut(s)	1040, 1076, 1931, 2405
AspLEI	GCGC	3 cut(s)	219, 431, 437
AspS9I	GGNCC	7 cut(s)	494, 564, 1084, 1303, 1540, 1794, 2354
AsuC2I	CCSGG	2 cut(s)	2399, 2411
AsuHPI	GGTGA	4 cut(s)	593, 681, 956, 2073
AsuNHI	GCTAGC	1 cut(s)	431
AvaII	GGWCC	4 cut(s)	564, 1303, 1540, 2354
BaeI	ACNNNNGTAYC	4 cut(s)	666, 699, 1125, 1158
BalI	TGGCCA	1 cut(s)	26
BanI	GGYRCC	1 cut(s)	1238
BarI	GAAGNNNNNNTAC	2 cut(s)	2218, 2250
BbrPI	CACGTG	1 cut(s)	892
BbsI	GAAGAC	2 cut(s)	92, 122
Bbv12I	GWGCWC	1 cut(s)	1099
BbvI	GCAGC	9 cut(s)	87, 196, 321, 532, 626, 998, 1593, 1963, 2218
BceAI	ACGGC	5 cut(s)	44, 285, 1416, 1628, 1808
BciVI	GTATCC	1 cut(s)	906
BclI	TGATCA	1 cut(s)	856
BcnI	CCSGG	2 cut(s)	2399, 2411
BcoDI	GTCTC	4 cut(s)	67, 420, 2034, 2164
BcuI	ACTAGT	1 cut(s)	389
BfaI	CTAG	4 cut(s)	53, 390, 432, 1551
BfmI	CTRYAG	1 cut(s)	540
BfoI	RGCGCY	2 cut(s)	432, 438
BfrI	CTTAAG	1 cut(s)	1406
BfuI	GTATCC	1 cut(s)	906
BglI	GCCNNNNNGGC	1 cut(s)	32
BlpI	GCTNAGC	2 cut(s)	363, 1443
Bme1390I	CCNGG	2 cut(s)	2399, 2411
Bme18I	GGWCC	4 cut(s)	564, 1303, 1540, 2354
BmgT120I	GGNCC	7 cut(s)	494, 564, 1084, 1303, 1540, 1794, 2354
BmiI	GGNNCC	5 cut(s)	495, 566, 1209, 1240, 1541
BmrFI	CCNGG	2 cut(s)	2399, 2411
BmrI	ACTGGG	2 cut(s)	795, 1293
BmsI	GCATC	4 cut(s)	861, 928, 1047, 1180
BmtI	GCTAGC	1 cut(s)	435
BmuI	ACTGGG	2 cut(s)	795, 1293
BpiI	GAAGAC	2 cut(s)	92, 122
BplI	GAGNNNNNCTC	4 cut(s)	134, 166, 2014, 2046
BpmI	CTGGAG	4 cut(s)	125, 402, 1800, 2443
Bpu10I	CCTNAGC	4 cut(s)	489, 639, 1391, 2087
Bpu1102I	GCTNAGC	2 cut(s)	363, 1443
BpuEI	CTTGAG	2 cut(s)	1273, 1346
BpuMI	CCSGG	2 cut(s)	2399, 2411
BsaAI	YACGTR	1 cut(s)	892
BsaBI	GATNNNNATC	1 cut(s)	1716
BsaHI	GRCGYC	1 cut(s)	47
BsaJI	CCNNGG	6 cut(s)	27, 329, 773, 1426, 1610, 2208
BsaWI	WCCGGW	2 cut(s)	81, 346
Bsc4I	CCNNNNNNNGG	3 cut(s)	1300, 1411, 1946
Bse118I	RCCGGY	2 cut(s)	237, 367
Bse1I	ACTGG	6 cut(s)	419, 801, 1288, 1479, 2293, 2330
Bse8I	GATNNNNATC	1 cut(s)	1716
BseAI	TCCGGA	1 cut(s)	346
BseDI	CCNNGG	6 cut(s)	27, 329, 773, 1426, 1610, 2208
BseGI	GGATG	3 cut(s)	466, 1318, 1717
BseJI	GATNNNNATC	1 cut(s)	1716
BseLI	CCNNNNNNNGG	3 cut(s)	1300, 1411, 1946
BseNI	ACTGG	6 cut(s)	419, 801, 1288, 1479, 2293, 2330
BseRI	GAGGAG	2 cut(s)	158, 2444
BseXI	GCAGC	9 cut(s)	87, 196, 321, 532, 626, 998, 1593, 1963, 2218
BseYI	CCCAGC	2 cut(s)	320, 1955
BsgI	GTGCAG	1 cut(s)	320
Bsh1236I	CGCG	1 cut(s)	14
BshFI	GGCC	7 cut(s)	26, 59, 251, 496, 1085, 1431, 1795
BshNI	GGYRCC	1 cut(s)	1238
BsiHKAI	GWGCWC	1 cut(s)	1099
BsiSI	CCGG	9 cut(s)	82, 238, 260, 279, 317, 347, 368, 2398, 2410
BsiWI	CGTACG	1 cut(s)	9
BslFI	GGGAC	5 cut(s)	188, 219, 550, 1553, 1973
BslI	CCNNNNNNNGG	3 cut(s)	1300, 1411, 1946
BsmAI	GTCTC	4 cut(s)	67, 420, 2034, 2164
BsmBI	CGTCTC	1 cut(s)	67
BsmFI	GGGAC	5 cut(s)	188, 219, 550, 1553, 1973
BsmI	GAATGC	1 cut(s)	731
BsnI	GGCC	7 cut(s)	26, 59, 251, 496, 1085, 1431, 1795
Bsp1286I	GDGCHC	1 cut(s)	1099
Bsp13I	TCCGGA	1 cut(s)	346
Bsp1407I	TGTACA	2 cut(s)	1575, 1617
Bsp143I	GATC	8 cut(s)	583, 604, 796, 856, 1468, 2176, 2260, 2418
Bsp1720I	GCTNAGC	2 cut(s)	363, 1443
Bsp19I	CCATGG	2 cut(s)	27, 773
BspANI	GGCC	7 cut(s)	26, 59, 251, 496, 1085, 1431, 1795
BspEI	TCCGGA	1 cut(s)	346
BspFNI	CGCG	1 cut(s)	14
BspLI	GGNNCC	5 cut(s)	495, 566, 1209, 1240, 1541
BspOI	GCTAGC	1 cut(s)	435
BspPI	GGATC	3 cut(s)	599, 791, 2171
BspQI	GCTCTTC	1 cut(s)	912
BspT107I	GGYRCC	1 cut(s)	1238
BspTI	CTTAAG	1 cut(s)	1406
BsrBI	CCGCTC	1 cut(s)	139
BsrFI	RCCGGY	2 cut(s)	237, 367
BsrGI	TGTACA	2 cut(s)	1575, 1617
BsrI	ACTGG	6 cut(s)	419, 801, 1288, 1479, 2293, 2330
BssAI	RCCGGY	2 cut(s)	237, 367
BssECI	CCNNGG	6 cut(s)	27, 329, 773, 1426, 1610, 2208
BssMI	GATC	8 cut(s)	583, 604, 796, 856, 1468, 2176, 2260, 2418
BssNI	GRCGYC	1 cut(s)	47
BssT1I	CCWWGG	4 cut(s)	27, 773, 1426, 2208
Bst4CI	ACNGT	4 cut(s)	121, 311, 1580, 1725
Bst6I	CTCTTC	2 cut(s)	912, 2187
BstACI	GRCGYC	1 cut(s)	47
BstAFI	CTTAAG	1 cut(s)	1406
BstAUI	TGTACA	2 cut(s)	1575, 1617
BstBAI	YACGTR	1 cut(s)	892
BstC8I	GCNNGC	3 cut(s)	427, 433, 1156
BstDSI	CCRYGG	3 cut(s)	27, 773, 1610
BstEII	GGTNACC	1 cut(s)	1696
BstENI	CCTNNNNNAGG	1 cut(s)	1409
BstF5I	GGATG	3 cut(s)	466, 1318, 1717
BstFNI	CGCG	1 cut(s)	14
BstH2I	RGCGCY	2 cut(s)	432, 438
BstHHI	GCGC	3 cut(s)	219, 431, 437
BstKTI	GATC	8 cut(s)	586, 607, 799, 859, 1471, 2179, 2263, 2421
BstMAI	GTCTC	4 cut(s)	67, 420, 2034, 2164
BstMBI	GATC	8 cut(s)	583, 604, 796, 856, 1468, 2176, 2260, 2418
BstNSI	RCATGY	5 cut(s)	79, 1158, 1733, 1810, 2312
BstPI	GGTNACC	1 cut(s)	1696
BstSCI	CCNGG	2 cut(s)	2397, 2409
BstSFI	CTRYAG	1 cut(s)	540
BstUI	CGCG	1 cut(s)	14
BstV1I	GCAGC	9 cut(s)	87, 196, 321, 532, 626, 998, 1593, 1963, 2218
BstV2I	GAAGAC	2 cut(s)	92, 122
BstXI	CCANNNNNNTGG	1 cut(s)	1824
BsuI	GTATCC	1 cut(s)	906
BsuRI	GGCC	7 cut(s)	26, 59, 251, 496, 1085, 1431, 1795
BtgI	CCRYGG	3 cut(s)	27, 773, 1610
BtgZI	GCGATG	3 cut(s)	1001, 1987, 2102
BtsCI	GGATG	3 cut(s)	466, 1318, 1717
BtsIMutI	CAGTG	4 cut(s)	763, 954, 1585, 2323
Cac8I	GCNNGC	3 cut(s)	427, 433, 1156
CaiI	CAGNNNCTG	1 cut(s)	103
CfoI	GCGC	3 cut(s)	219, 431, 437
Cfr10I	RCCGGY	2 cut(s)	237, 367
Cfr13I	GGNCC	7 cut(s)	494, 564, 1084, 1303, 1540, 1794, 2354
CseI	GACGC	1 cut(s)	36
CspCI	CAANNNNNGTGG	4 cut(s)	1357, 1392, 1517, 1552
DpnI	GATC	8 cut(s)	585, 606, 798, 858, 1470, 2178, 2262, 2420
DpnII	GATC	8 cut(s)	583, 604, 796, 856, 1468, 2176, 2260, 2418
DraIII	CACNNNGTG	1 cut(s)	1106
EaeI	YGGCCR	2 cut(s)	24, 57
Eam1104I	CTCTTC	2 cut(s)	912, 2187
EarI	CTCTTC	2 cut(s)	912, 2187
Eco130I	CCWWGG	4 cut(s)	27, 773, 1426, 2208
Eco32I	GATATC	1 cut(s)	2371
Eco47I	GGWCC	4 cut(s)	564, 1303, 1540, 2354
Eco47III	AGCGCT	1 cut(s)	430
Eco57I	CTGAAG	2 cut(s)	699, 2336
Eco72I	CACGTG	1 cut(s)	892
Eco91I	GGTNACC	1 cut(s)	1696
EcoNI	CCTNNNNNAGG	1 cut(s)	1409
EcoO109I	RGGNCCY	1 cut(s)	564
EcoO65I	GGTNACC	1 cut(s)	1696
EcoRI	GAATTC	1 cut(s)	2405
EcoRV	GATATC	1 cut(s)	2371
EcoT14I	CCWWGG	4 cut(s)	27, 773, 1426, 2208
EcoT22I	ATGCAT	1 cut(s)	1160
ErhI	CCWWGG	4 cut(s)	27, 773, 1426, 2208
Esp3I	CGTCTC	1 cut(s)	67
FalI	AAGNNNNNCTT	4 cut(s)	714, 746, 906, 938
FaqI	GGGAC	5 cut(s)	188, 219, 550, 1553, 1973
FauI	CCCGC	4 cut(s)	132, 164, 221, 275
FbaI	TGATCA	1 cut(s)	856
FokI	GGATG	3 cut(s)	473, 1325, 1704
FspBI	CTAG	4 cut(s)	53, 390, 432, 1551
GlaI	GCGC	3 cut(s)	218, 430, 436
GsaI	CCCAGC	2 cut(s)	324, 1959
GsuI	CTGGAG	4 cut(s)	125, 402, 1800, 2443
HaeII	RGCGCY	2 cut(s)	432, 438
HaeIII	GGCC	7 cut(s)	26, 59, 251, 496, 1085, 1431, 1795
HapII	CCGG	9 cut(s)	82, 238, 260, 279, 317, 347, 368, 2398, 2410
HgaI	GACGC	1 cut(s)	36
HhaI	GCGC	3 cut(s)	219, 431, 437
Hin1I	GRCGYC	1 cut(s)	47
Hin6I	GCGC	3 cut(s)	217, 429, 435
HinP1I	GCGC	3 cut(s)	217, 429, 435
HincII	GTYRAC	2 cut(s)	289, 2479
HindII	GTYRAC	2 cut(s)	289, 2479
HindIII	AAGCTT	1 cut(s)	1898
HinfI	GANTC	8 cut(s)	5, 176, 908, 1024, 1270, 1712, 1907, 2013
HpaII	CCGG	9 cut(s)	82, 238, 260, 279, 317, 347, 368, 2398, 2410
HphI	GGTGA	4 cut(s)	593, 681, 956, 2073
Hpy166II	GTNNAC	8 cut(s)	289, 307, 1303, 1564, 1864, 1940, 2290, 2479
Hpy188III	TCNNGA	9 cut(s)	347, 722, 1106, 1232, 1274, 1667, 1709, 1904, 2422
Hpy8I	GTNNAC	8 cut(s)	289, 307, 1303, 1564, 1864, 1940, 2290, 2479
Hpy99I	CGWCG	2 cut(s)	44, 52
HpyAV	CCTTC	5 cut(s)	344, 446, 971, 1198, 1906
HpyCH4III	ACNGT	4 cut(s)	121, 311, 1580, 1725
HpyCH4IV	ACGT	4 cut(s)	264, 891, 1982, 2385
HpySE526I	ACGT	4 cut(s)	264, 891, 1982, 2385
Hsp92I	GRCGYC	1 cut(s)	47
HspAI	GCGC	3 cut(s)	217, 429, 435
Kpn2I	TCCGGA	1 cut(s)	346
Ksp22I	TGATCA	1 cut(s)	856
Kzo9I	GATC	8 cut(s)	583, 604, 796, 856, 1468, 2176, 2260, 2418
LguI	GCTCTTC	1 cut(s)	912
LmnI	GCTCC	4 cut(s)	136, 775, 1102, 1207
Lsp1109I	GCAGC	9 cut(s)	87, 196, 321, 532, 626, 998, 1593, 1963, 2218
LweI	GCATC	4 cut(s)	861, 928, 1047, 1180
MaeI	CTAG	4 cut(s)	53, 390, 432, 1551
MaeII	ACGT	4 cut(s)	264, 891, 1982, 2385
MaeIII	GTNAC	7 cut(s)	265, 514, 1106, 1645, 1696, 2079, 2319
MalI	GATC	8 cut(s)	585, 606, 798, 858, 1470, 2178, 2262, 2420
MbiI	CCGCTC	1 cut(s)	139
MboI	GATC	8 cut(s)	583, 604, 796, 856, 1468, 2176, 2260, 2418
MboII	GAAGA	9 cut(s)	97, 127, 205, 479, 710, 929, 1040, 2174, 2228
MfeI	CAATTG	1 cut(s)	609
MhlI	GDGCHC	1 cut(s)	1099
MlsI	TGGCCA	1 cut(s)	26
MluNI	TGGCCA	1 cut(s)	26
MlyI	GAGTC	3 cut(s)	14, 170, 1279
MmeI	TCCRAC	1 cut(s)	1535
Mox20I	TGGCCA	1 cut(s)	26
Mph1103I	ATGCAT	1 cut(s)	1160
MroI	TCCGGA	1 cut(s)	346
MscI	TGGCCA	1 cut(s)	26
MseI	TTAA	5 cut(s)	1062, 1407, 1892, 2154, 2195
Msp20I	TGGCCA	1 cut(s)	26
MspA1I	CMGCKG	4 cut(s)	100, 617, 1606, 1687
MspCI	CTTAAG	1 cut(s)	1406
MspI	CCGG	9 cut(s)	82, 238, 260, 279, 317, 347, 368, 2398, 2410
MspR9I	CCNGG	2 cut(s)	2399, 2411
MunI	CAATTG	1 cut(s)	609
Mva1269I	GAATGC	1 cut(s)	731
MvnI	CGCG	1 cut(s)	14
NciI	CCSGG	2 cut(s)	2399, 2411
NcoI	CCATGG	2 cut(s)	27, 773
NdeII	GATC	8 cut(s)	583, 604, 796, 856, 1468, 2176, 2260, 2418
NheI	GCTAGC	1 cut(s)	431
NlaIV	GGNNCC	5 cut(s)	495, 566, 1209, 1240, 1541
NmeAIII	GCCGAG	3 cut(s)	227, 354, 1130
NmuCI	GTSAC	4 cut(s)	1106, 1645, 2079, 2319
NsiI	ATGCAT	1 cut(s)	1160
NspI	RCATGY	5 cut(s)	79, 1158, 1733, 1810, 2312
PaeI	GCATGC	1 cut(s)	1158
PciSI	GCTCTTC	1 cut(s)	912
PctI	GAATGC	1 cut(s)	731
PfeI	GAWTC	5 cut(s)	908, 1024, 1712, 1907, 2013
Pfl23II	CGTACG	1 cut(s)	9
PflMI	CCANNNNNTGG	1 cut(s)	1946
PfoI	TCCNGGA	1 cut(s)	2409
PleI	GAGTC	3 cut(s)	13, 170, 1278
PmaCI	CACGTG	1 cut(s)	892
PmlI	CACGTG	1 cut(s)	892
PpsI	GAGTC	3 cut(s)	13, 170, 1278
Ppu21I	YACGTR	1 cut(s)	892
PpuMI	RGGWCCY	1 cut(s)	564
PsiI	TTATAA	2 cut(s)	1116, 1187
Psp1406I	AACGTT	2 cut(s)	1982, 2385
Psp5II	RGGWCCY	1 cut(s)	564
PspCI	CACGTG	1 cut(s)	892
PspEI	GGTNACC	1 cut(s)	1696
PspFI	CCCAGC	2 cut(s)	320, 1955
PspLI	CGTACG	1 cut(s)	9
PspN4I	GGNNCC	5 cut(s)	495, 566, 1209, 1240, 1541
PspPI	GGNCC	7 cut(s)	494, 564, 1084, 1303, 1540, 1794, 2354
PspPPI	RGGWCCY	1 cut(s)	564
PstNI	CAGNNNCTG	1 cut(s)	103
PvuII	CAGCTG	3 cut(s)	100, 617, 1606
SapI	GCTCTTC	1 cut(s)	912
SaqAI	TTAA	5 cut(s)	1062, 1407, 1892, 2154, 2195
Sau3AI	GATC	8 cut(s)	583, 604, 796, 856, 1468, 2176, 2260, 2418
Sau96I	GGNCC	7 cut(s)	494, 564, 1084, 1303, 1540, 1794, 2354
SchI	GAGTC	3 cut(s)	14, 170, 1279
ScrFI	CCNGG	2 cut(s)	2399, 2411
SduI	GDGCHC	1 cut(s)	1099
SfaNI	GCATC	4 cut(s)	861, 928, 1047, 1180
SfcI	CTRYAG	1 cut(s)	540
SinI	GGWCC	4 cut(s)	564, 1303, 1540, 2354
SmlI	CTYRAG	3 cut(s)	1252, 1361, 1406
SmoI	CTYRAG	3 cut(s)	1252, 1361, 1406
SpeI	ACTAGT	1 cut(s)	389
SphI	GCATGC	1 cut(s)	1158
SspI	AATATT	1 cut(s)	1227
SspMI	CTAG	4 cut(s)	53, 390, 432, 1551
StyD4I	CCNGG	2 cut(s)	2397, 2409
StyI	CCWWGG	4 cut(s)	27, 773, 1426, 2208
TaaI	ACNGT	4 cut(s)	121, 311, 1580, 1725
TaiI	ACGT	4 cut(s)	267, 894, 1985, 2388
TaqI	TCGA	3 cut(s)	1231, 1767, 1910
TatI	WGTACW	5 cut(s)	1365, 1500, 1575, 1617, 1863
TauI	GCSGC	7 cut(s)	35, 165, 168, 171, 184, 217, 228
TfiI	GAWTC	5 cut(s)	908, 1024, 1712, 1907, 2013
Tru1I	TTAA	5 cut(s)	1062, 1407, 1892, 2154, 2195
Tru9I	TTAA	5 cut(s)	1062, 1407, 1892, 2154, 2195
TscAI	CASTG	4 cut(s)	763, 961, 1585, 2330
TseFI	GTSAC	4 cut(s)	1106, 1645, 2079, 2319
TseI	GCWGC	9 cut(s)	100, 184, 334, 545, 614, 986, 1606, 1976, 2231
Tsp45I	GTSAC	4 cut(s)	1106, 1645, 2079, 2319
TspGWI	ACGGA	2 cut(s)	1925, 2025
TspRI	CASTG	4 cut(s)	763, 961, 1585, 2330
Van91I	CCANNNNNTGG	1 cut(s)	1946
Vha464I	CTTAAG	1 cut(s)	1406
VpaK11BI	GGWCC	4 cut(s)	564, 1303, 1540, 2354
XagI	CCTNNNNNAGG	1 cut(s)	1409
XapI	RAATTY	4 cut(s)	1040, 1076, 1931, 2405
XceI	RCATGY	5 cut(s)	79, 1158, 1733, 1810, 2312
XcmI	CCANNNNNNNNNTGG	1 cut(s)	575
XspI	CTAG	4 cut(s)	53, 390, 432, 1551
Zsp2I	ATGCAT	1 cut(s)	1160

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.