RLG00000005751

AMP deaminase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0001592
Physical Location & Seq
Forward (+)
1468505 .. 1474085
5581 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005751

Sequence Viewer

Length: 2619 bp
ATGGACTCGTCGTCTTCATCTTCTTCCTCCACCTCTTCAACCTCCGCTCTCAACCTAGCCATGGCCGCCTTAGTCGGCGCCTCCCTCATGGCCGTCTCCGCCTTCTACATCCACAAACGCAGCGTCGACCAAGTCATCGACCGCCTCATCGAGATCCGCCGCAAGCCTCCGTCTCTCTTCCGCTCCGAAGCCGCCGACGACGACGACGAAGAAGAAGATTACATCGAAGAAGAAGACGATCAAGAGCAGCAGCTGCACCGAGGGTTTGGCTCTGACCGCGACACCGTGATCGATCGGAAAATGACGCCGTCCAGGTCCTTGGATGAGAAATCGATTCACCCTTACAGAATCTCGTCCTCGCTGCCCAATGCCGATATGAGAAGCGGCGGTTTGATCGACGAGGGCGCCAAGTTTGATCCGCTCTCGAATTATCGAGCTCCTAGGTTTTCTTCTTCGGCTGACAGGCTCAATTTCATTCCTTCTGGCCTTCCGCCGCTCCGAACCGATCAAACACACGAGTCTCAGTCTGTCAGTTCCACTACAAGGATGGCTACGTCTATGTCTGTTGGGAGGTTGACGACACCGAGATCTCACGCCGGACGTGTGGATGATTCCGATGAGGAGGGAACTGAGTATGCAAATGAAGATGGTTCTCCTTTCAACTATGAGAATGGAGATGCAAATGACAATTCAGTTTACCAAAATGAAGTGCTGCGTACAAGTAACTTTATACAAGAGGTAGATGGAGCTTCAGCACAGATGGGGAGGAATGACCCCTCTCTTGCAAGAATTCTTTCACCGTTAAGTGCACCAATGAATGAGTCAATAACCAAAGAAGATGAAGAAGTACACAGGATGATTCGAGATTGCTTGGATCTGCGTAAGAAGTACCTTTACCGGGAAAATGTTGTTCCATGGAGGGTAGCCAGGCCAGACTCATCAGAGAAGAAAAGCAACCCATACCATTTTGAACCTGTTAAAGCATCAGCTCACTGCTTTAGGATGGAGGACGGTGTCATACATGTTTATGCAAGTGAAAATGACTCTGAAGAGATCTACCCTGTTGCAAGTGCAACAACATTTTTCACTGATCTCCATTATCTTCTGAAAGTTGTGTCTATCGGAAATGTTCGCTCTGTATGCCATCATAGGTTAAGATTTCTTGATGAGAAATACCGTGTACATCATTTACTAAATGAGGGGGAGGAGTTTTTAGCTCAGAAGGGTGCACCCCACCGTGATTTTTACAACGTTAGAAAAGTTGATACACATGTGCATCACTCTGCTTGCATGAACCAGAAGCATCTTCTGAACTTCATCAAGTCAAAGCTGAAAAAAGAACCTGATGAGGTTGTCATATTCAGAGATGGAAAATATCTTACACTTAAGGAAGTTTTTGAGAGTTTGGACTTGACAGGGTATGATCTGAATGTTGACTTATTGGATGTTCATGCGGATAAGACTACCTTTCATCGATTTGACAAGTTCAACCTAAAGTATAATCCATGTGGACAGAGCAGACTCAGAGAGATATTCTTAAAGCAAGACAATCTTATCCAAGGACGATTTCTAGCAGAAGTAACAAAGGAAGTTTTGTCAGATCTTGAAGCCATGAAATACCAGATGGCAGAGTACAGGATTTCAGTTTATGGAAGAAAACAAAGTGAGTGGGATCAACTGGCTAGTTGGTTTGTTAACAATGACATTTATAGCGAGAATGTAGTGTGGTTAATACAGTTACCACGGTTATACAACATCTACAAGAAGATGGGCATTGTTACCTCTTTCCAAAACATTTTAGATAATGTGTTCATTCCACTCTTTGAAGTCACAGTGGATCCAAATTCACATCCTCAATTACATTTGTTCCTGAAGCAGGTGGTGGGTTTTGACGTTGTAGACGATGAAAGTAGACCAGAAAGGCGTCCGACAAAACACATGCCAACGCCATCTGAATGGACGAATGAATTCAATCCTGCATATTCTTATTATGCTTATTACTGCTATGCAAACTTGTACACTCTTAATAAGCTTCGTGAGTCAAAAGGAATGACTACAATAAAATTCCGGCCGCACTGTGGAGAGGCGGGTGATGTTGAACATTTGGCTGCGGGATTTCTTGTATGCCATAATATCTCACATGGGATCAATCTCCGGTACTCTCCAGTTCTGCAATATCTGTATTACCTGGGGCAGGTGGGACTGCTTATGTCACCCTTGAGCAATAACTCTCTTTTCTTAGATTACAAGAAAAACCCGTTTCCTGTATTCTTTCAACGCGGGCTAAATGTCTCGCTTTCAAGCGATGATCCTTTGCTAATTCATTTGACAAAAGAAGCATTGGTGGAAGAATATAGTGTTGCAGCACAGGTATGGAAGCTCAGTGCTTGTGACCTCTGTGAGATAGCTAGAAATTCTGTATATCATTCTGGATTTTCACATGTAGCAAAGGCACATTGGCTTGGTAGCAAGTATTTCTTGAGAGGCCCTAAAGGAAATGATATACAAAAGACGAACGTTCCCAATTTGAGGATTGCCTTTCGAGAGACAACCTGGAAGGAGGAGATGCAGTATATCTATTCAGGAGAAGCTGAGTTTTCAGAAGAAGTAGATCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130
Pfam Domains
Protein Families
A_deaminase

Protein Analysis

873

Amino Acids

99.92

Weight (kDa)

5.69

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP_deaminase PF19326 280 - 859 2.2e-287 AMP deaminase
A_deaminase PF00962 687 - 813 8.1e-09 Adenosine deaminase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1867, 2185
Acc36I ACCTGC 2 cut(s) 1867, 2185
AccB1I GGYRCC 2 cut(s) 77, 404
AccBSI CCGCTC 4 cut(s) 47, 183, 421, 496
AccI GTMKAC 3 cut(s) 126, 1899, 1912
AccII CGCG 2 cut(s) 279, 2280
AclI AACGTT 2 cut(s) 1251, 2517
AclWI GGATC 9 cut(s) 148, 410, 882, 1680, 1832, 1845, 2153, 2303, 2606
AcoI YGGCCR 3 cut(s) 63, 90, 2069
AcsI RAATTY 5 cut(s) 789, 1843, 1967, 2063, 2413
AcuI CTGAAG 3 cut(s) 735, 1068, 1892
AcyI GRCGYC 4 cut(s) 78, 305, 405, 1924
AfaI GTAC 7 cut(s) 718, 849, 890, 1182, 1634, 2018, 2159
AfiI CCNNNNNNNGG 7 cut(s) 61, 543, 898, 1876, 2078, 2194, 2529
AflII CTTAAG 1 cut(s) 1385
AflIII ACRYGT 4 cut(s) 601, 1021, 1270, 2440
AhdI GACNNNNNGTC 1 cut(s) 10
AjiI CACGTC 1 cut(s) 602
AjnI CCWGG 4 cut(s) 311, 926, 2187, 2552
AjuI GAANNNNNNNTTGG 2 cut(s) 1551, 1583
Alw21I GWGCWC 3 cut(s) 439, 811, 1231
Alw26I GTCTC 5 cut(s) 100, 177, 525, 2296, 2540
Alw44I GTGCAC 2 cut(s) 807, 1227
AlwI GGATC 9 cut(s) 148, 410, 882, 1680, 1832, 1845, 2153, 2303, 2606
AlwNI CAGNNNCTG 1 cut(s) 253
AoxI GGCC 6 cut(s) 63, 90, 484, 929, 2069, 2485
ApaLI GTGCAC 2 cut(s) 807, 1227
ApeKI GCWGC 8 cut(s) 120, 247, 250, 253, 361, 712, 2108, 2363
ApoI RAATTY 5 cut(s) 789, 1843, 1967, 2063, 2413
ArsI GACNNNNNNTTYG 2 cut(s) 108, 140
Asp700I GAANNNNTTC 2 cut(s) 793, 1967
AspA2I CCTAGG 1 cut(s) 440
AspLEI GCGC 2 cut(s) 80, 407
AspS9I GGNCC 2 cut(s) 315, 2486
AsuC2I CCSGG 1 cut(s) 899
AsuHPI GGTGA 4 cut(s) 329, 789, 2102, 2205
AvaII GGWCC 1 cut(s) 315
AvrII CCTAGG 1 cut(s) 440
BaeGI GKGCMC 2 cut(s) 811, 1231
BaeI ACNNNNGTAYC 2 cut(s) 1257, 1290
BamHI GGATCC 1 cut(s) 1837
BanI GGYRCC 2 cut(s) 77, 404
BanII GRGCYC 1 cut(s) 439
BarI GAAGNNNNNNTAC 2 cut(s) 878, 910
BauI CACGAG 1 cut(s) 515
BbsI GAAGAC 2 cut(s) 6, 240
Bbv12I GWGCWC 3 cut(s) 439, 811, 1231
BbvI GCAGC 8 cut(s) 132, 240, 259, 262, 348, 699, 2095, 2375
BceAI ACGGC 2 cut(s) 77, 292
BciT130I CCWGG 4 cut(s) 313, 928, 2189, 2554
BcnI CCSGG 1 cut(s) 899
BcoDI GTCTC 5 cut(s) 100, 177, 525, 2296, 2540
BfaI CTAG 5 cut(s) 56, 441, 1571, 1683, 2409
BfoI RGCGCY 2 cut(s) 81, 408
BfrI CTTAAG 1 cut(s) 1385
BfuAI ACCTGC 2 cut(s) 1867, 2185
BglII AGATCT 3 cut(s) 587, 1053, 1600
BlnI CCTAGG 1 cut(s) 440
Bme1390I CCNGG 5 cut(s) 313, 899, 928, 2189, 2554
Bme18I GGWCC 1 cut(s) 315
BmeRI GACNNNNNGTC 1 cut(s) 10
BmgBI CACGTC 1 cut(s) 602
BmgT120I GGNCC 2 cut(s) 315, 2486
BmiI GGNNCC 3 cut(s) 79, 406, 1839
BmrFI CCNGG 5 cut(s) 313, 899, 928, 2189, 2554
BmsI GCATC 5 cut(s) 667, 992, 1285, 1312, 2556
BpiI GAAGAC 2 cut(s) 6, 240
BpmI CTGGAG 1 cut(s) 2148
BpuEI CTTGAG 2 cut(s) 2239, 2500
BpuMI CCSGG 1 cut(s) 899
Bsa29I ATCGAT 3 cut(s) 291, 332, 1474
BsaHI GRCGYC 4 cut(s) 78, 305, 405, 1924
BsaJI CCNNGG 8 cut(s) 60, 259, 318, 440, 914, 1558, 1742, 2188
BsaWI WCCGGW 1 cut(s) 2154
BsaXI ACNNNNNCTCC 2 cut(s) 2555, 2585
Bsc4I CCNNNNNNNGG 7 cut(s) 61, 543, 898, 1876, 2078, 2194, 2529
Bse1I ACTGG 2 cut(s) 1683, 2165
BseBI CCWGG 4 cut(s) 313, 928, 2189, 2554
BseCI ATCGAT 3 cut(s) 291, 332, 1474
BseDI CCNNGG 8 cut(s) 60, 259, 318, 440, 914, 1558, 1742, 2188
BseGI GGATG 8 cut(s) 108, 328, 552, 613, 861, 1008, 1450, 1849
BseLI CCNNNNNNNGG 7 cut(s) 61, 543, 898, 1876, 2078, 2194, 2529
BseMII CTCAG 6 cut(s) 536, 621, 1232, 1537, 2395, 2583
BseNI ACTGG 2 cut(s) 1683, 2165
BseRI GAGGAG 3 cut(s) 635, 1220, 2576
BseSI GKGCMC 2 cut(s) 811, 1231
BseX3I CGGCCG 1 cut(s) 2069
BseXI GCAGC 8 cut(s) 132, 240, 259, 262, 348, 699, 2095, 2375
BsgI GTGCAG 1 cut(s) 239
Bsh1236I CGCG 2 cut(s) 279, 2280
Bsh1285I CGRYCG 3 cut(s) 142, 295, 2072
BshFI GGCC 6 cut(s) 65, 92, 486, 931, 2071, 2487
BshNI GGYRCC 2 cut(s) 77, 404
BshVI ATCGAT 3 cut(s) 291, 332, 1474
BsiEI CGRYCG 3 cut(s) 142, 295, 2072
BsiHKAI GWGCWC 3 cut(s) 439, 811, 1231
BsiSI CCGG 4 cut(s) 597, 898, 2068, 2155
BslFI GGGAC 1 cut(s) 2214
BslI CCNNNNNNNGG 7 cut(s) 61, 543, 898, 1876, 2078, 2194, 2529
BsmAI GTCTC 5 cut(s) 100, 177, 525, 2296, 2540
BsmBI CGTCTC 2 cut(s) 100, 177
BsmFI GGGAC 1 cut(s) 2214
BsnI GGCC 6 cut(s) 65, 92, 486, 931, 2071, 2487
Bsp1286I GDGCHC 3 cut(s) 439, 811, 1231
Bsp1407I TGTACA 2 cut(s) 1180, 2016
Bsp19I CCATGG 2 cut(s) 60, 914
BspANI GGCC 6 cut(s) 65, 92, 486, 931, 2071, 2487
BspCNI CTCAG 6 cut(s) 535, 622, 1231, 1536, 2394, 2584
BspDI ATCGAT 3 cut(s) 291, 332, 1474
BspFNI CGCG 2 cut(s) 279, 2280
BspLI GGNNCC 3 cut(s) 79, 406, 1839
BspMI ACCTGC 2 cut(s) 1867, 2185
BspPI GGATC 9 cut(s) 148, 410, 882, 1680, 1832, 1845, 2153, 2303, 2606
BspT107I GGYRCC 2 cut(s) 77, 404
BspTI CTTAAG 1 cut(s) 1385
BsrBI CCGCTC 4 cut(s) 47, 183, 421, 496
BsrGI TGTACA 2 cut(s) 1180, 2016
BsrI ACTGG 2 cut(s) 1683, 2165
BssECI CCNNGG 8 cut(s) 60, 259, 318, 440, 914, 1558, 1742, 2188
BssNI GRCGYC 4 cut(s) 78, 305, 405, 1924
BssSI CACGAG 1 cut(s) 515
BssT1I CCWWGG 5 cut(s) 60, 318, 440, 914, 1558
Bst2BI CACGAG 1 cut(s) 515
Bst2UI CCWGG 4 cut(s) 313, 928, 2189, 2554
Bst4CI ACNGT 9 cut(s) 286, 801, 1013, 1178, 1238, 1737, 1746, 1834, 2078
Bst6I CTCTTC 3 cut(s) 40, 182, 1044
BstACI GRCGYC 4 cut(s) 78, 305, 405, 1924
BstAFI CTTAAG 1 cut(s) 1385
BstAPI GCANNNNNTGC 1 cut(s) 253
BstAUI TGTACA 2 cut(s) 1180, 2016
BstC8I GCNNGC 3 cut(s) 164, 1288, 2282
BstDEI CTNAG 8 cut(s) 70, 522, 630, 1218, 1523, 2239, 2381, 2592
BstDSI CCRYGG 3 cut(s) 60, 914, 1742
BstENI CCTNNNNNAGG 2 cut(s) 1874, 2192
BstF5I GGATG 8 cut(s) 108, 328, 552, 613, 861, 1008, 1450, 1849
BstFNI CGCG 2 cut(s) 279, 2280
BstH2I RGCGCY 2 cut(s) 81, 408
BstHHI GCGC 2 cut(s) 80, 407
BstMAI GTCTC 5 cut(s) 100, 177, 525, 2296, 2540
BstMCI CGRYCG 3 cut(s) 142, 295, 2072
BstMWI GCNNNNNNNGC 5 cut(s) 65, 98, 253, 276, 1140
BstNI CCWGG 4 cut(s) 313, 928, 2189, 2554
BstNSI RCATGY 4 cut(s) 1025, 1274, 1942, 2444
BstSCI CCNGG 5 cut(s) 311, 897, 926, 2187, 2552
BstSLI GKGCMC 2 cut(s) 811, 1231
BstUI CGCG 2 cut(s) 279, 2280
BstV1I GCAGC 8 cut(s) 132, 240, 259, 262, 348, 699, 2095, 2375
BstV2I GAAGAC 2 cut(s) 6, 240
BstX2I RGATCY 7 cut(s) 153, 587, 874, 1053, 1600, 1837, 2611
BstXI CCANNNNNNTGG 2 cut(s) 319, 1956
BstYI RGATCY 7 cut(s) 153, 587, 874, 1053, 1600, 1837, 2611
BstZI CGGCCG 1 cut(s) 2069
Bsu15I ATCGAT 3 cut(s) 291, 332, 1474
BsuRI GGCC 6 cut(s) 65, 92, 486, 931, 2071, 2487
BsuTUI ATCGAT 3 cut(s) 291, 332, 1474
BtgI CCRYGG 3 cut(s) 60, 914, 1742
BtgZI GCGATG 1 cut(s) 2319
BtrI CACGTC 1 cut(s) 602
BtsCI GGATG 8 cut(s) 108, 328, 552, 613, 861, 1008, 1450, 1849
BtsI GCAGTG 1 cut(s) 991
BtsIMutI CAGTG 5 cut(s) 991, 1086, 1839, 2074, 2389
BveI ACCTGC 2 cut(s) 1867, 2185
Cac8I GCNNGC 3 cut(s) 164, 1288, 2282
CaiI CAGNNNCTG 1 cut(s) 253
CfoI GCGC 2 cut(s) 80, 407
Cfr13I GGNCC 2 cut(s) 315, 2486
ClaI ATCGAT 3 cut(s) 291, 332, 1474
CseI GACGC 3 cut(s) 112, 313, 1913
Csp6I GTAC 7 cut(s) 717, 848, 889, 1181, 1633, 2017, 2158
CspCI CAANNNNNGTGG 2 cut(s) 1649, 1684
CviQI GTAC 7 cut(s) 717, 848, 889, 1181, 1633, 2017, 2158
DdeI CTNAG 8 cut(s) 70, 522, 630, 1218, 1523, 2239, 2381, 2592
DinI GGCGCC 2 cut(s) 79, 406
DriI GACNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 3 cut(s) 63, 90, 2069
EagI CGGCCG 1 cut(s) 2069
Eam1104I CTCTTC 3 cut(s) 40, 182, 1044
Eam1105I GACNNNNNGTC 1 cut(s) 10
EarI CTCTTC 3 cut(s) 40, 182, 1044
EciI GGCGGA 3 cut(s) 88, 146, 480
Ecl136II GAGCTC 1 cut(s) 437
EclXI CGGCCG 1 cut(s) 2069
Eco130I CCWWGG 5 cut(s) 60, 318, 440, 914, 1558
Eco24I GRGCYC 1 cut(s) 439
Eco47I GGWCC 1 cut(s) 315
Eco52I CGGCCG 1 cut(s) 2069
Eco53kI GAGCTC 1 cut(s) 437
Eco57I CTGAAG 3 cut(s) 735, 1068, 1892
EcoICRI GAGCTC 1 cut(s) 437
EcoNI CCTNNNNNAGG 2 cut(s) 1874, 2192
EcoO109I RGGNCCY 2 cut(s) 315, 2486
EcoRI GAATTC 2 cut(s) 789, 1967
EcoRII CCWGG 4 cut(s) 311, 926, 2187, 2552
EcoT14I CCWWGG 5 cut(s) 60, 318, 440, 914, 1558
EcoT38I GRGCYC 1 cut(s) 439
EgeI GGCGCC 2 cut(s) 79, 406
EheI GGCGCC 2 cut(s) 79, 406
ErhI CCWWGG 5 cut(s) 60, 318, 440, 914, 1558
Esp3I CGTCTC 2 cut(s) 100, 177
FalI AAGNNNNNCTT 6 cut(s) 1451, 1483, 1536, 1568, 2462, 2494
FaqI GGGAC 1 cut(s) 2214
FauI CCCGC 3 cut(s) 2080, 2104, 2273
FblI GTMKAC 3 cut(s) 126, 1899, 1912
FokI GGATG 8 cut(s) 95, 335, 559, 620, 868, 1015, 1457, 1836
FriOI GRGCYC 1 cut(s) 439
FspBI CTAG 5 cut(s) 56, 441, 1571, 1683, 2409
GlaI GCGC 2 cut(s) 79, 406
GsuI CTGGAG 1 cut(s) 2148
HaeII RGCGCY 2 cut(s) 81, 408
HaeIII GGCC 6 cut(s) 65, 92, 486, 931, 2071, 2487
HapII CCGG 4 cut(s) 597, 898, 2068, 2155
HgaI GACGC 3 cut(s) 112, 313, 1913
HhaI GCGC 2 cut(s) 80, 407
Hin1I GRCGYC 4 cut(s) 78, 305, 405, 1924
Hin6I GCGC 2 cut(s) 78, 405
HinP1I GCGC 2 cut(s) 78, 405
HincII GTYRAC 4 cut(s) 127, 576, 1435, 1696
HindII GTYRAC 4 cut(s) 127, 576, 1435, 1696
HindIII AAGCTT 1 cut(s) 2030
HpaI GTTAAC 1 cut(s) 1696
HpaII CCGG 4 cut(s) 597, 898, 2068, 2155
HphI GGTGA 4 cut(s) 329, 789, 2102, 2205
Hpy99I CGWCG 7 cut(s) 13, 128, 200, 203, 206, 209, 401
HpyAV CCTTC 5 cut(s) 112, 489, 497, 1216, 2551
HpyCH4III ACNGT 9 cut(s) 286, 801, 1013, 1178, 1238, 1737, 1746, 1834, 2078
HpyCH4IV ACGT 5 cut(s) 554, 601, 1251, 1893, 2517
HpyF10VI GCNNNNNNNGC 5 cut(s) 65, 98, 253, 276, 1140
HpyF3I CTNAG 8 cut(s) 70, 522, 630, 1218, 1523, 2239, 2381, 2592
HpySE526I ACGT 5 cut(s) 554, 601, 1251, 1893, 2517
Hsp92I GRCGYC 4 cut(s) 78, 305, 405, 1924
HspAI GCGC 2 cut(s) 78, 405
KasI GGCGCC 2 cut(s) 77, 404
KspAI GTTAAC 1 cut(s) 1696
LmnI GCTCC 4 cut(s) 188, 442, 501, 746
Lsp1109I GCAGC 8 cut(s) 132, 240, 259, 262, 348, 699, 2095, 2375
LweI GCATC 5 cut(s) 667, 992, 1285, 1312, 2556
MaeI CTAG 5 cut(s) 56, 441, 1571, 1683, 2409
MaeII ACGT 5 cut(s) 554, 601, 1251, 1893, 2517
MaeIII GTNAC 7 cut(s) 722, 1579, 1737, 1777, 1828, 2211, 2390
MbiI CCGCTC 4 cut(s) 47, 183, 421, 496
MflI RGATCY 7 cut(s) 153, 587, 874, 1053, 1600, 1837, 2611
MhlI GDGCHC 3 cut(s) 439, 811, 1231
Mly113I GGCGCC 2 cut(s) 78, 405
MlyI GAGTC 6 cut(s) 527, 830, 929, 1037, 1515, 2048
MmeI TCCRAC 1 cut(s) 1952
MroXI GAANNNNTTC 2 cut(s) 793, 1967
MseI TTAA 8 cut(s) 803, 978, 1154, 1386, 1538, 1695, 1730, 2025
MslI CAYNNNNRTG 3 cut(s) 1026, 1954, 2371
MspA1I CMGCKG 1 cut(s) 253
MspCI CTTAAG 1 cut(s) 1385
MspI CCGG 4 cut(s) 597, 898, 2068, 2155
MspR9I CCNGG 5 cut(s) 313, 899, 928, 2189, 2554
MvaI CCWGG 4 cut(s) 313, 928, 2189, 2554
MvnI CGCG 2 cut(s) 279, 2280
MwoI GCNNNNNNNGC 5 cut(s) 65, 98, 253, 276, 1140
NarI GGCGCC 2 cut(s) 78, 405
NciI CCSGG 1 cut(s) 899
NcoI CCATGG 2 cut(s) 60, 914
NlaIV GGNNCC 3 cut(s) 79, 406, 1839
NmuCI GTSAC 3 cut(s) 1828, 2211, 2390
NspI RCATGY 4 cut(s) 1025, 1274, 1942, 2444
PaqCI CACCTGC 2 cut(s) 1867, 2185
PciI ACATGT 3 cut(s) 1021, 1270, 2440
PcsI WCGNNNNNNNCGW 2 cut(s) 204, 1899
PdmI GAANNNNTTC 2 cut(s) 793, 1967
PfeI GAWTC 4 cut(s) 334, 348, 611, 859
PflFI GACNNNGTC 3 cut(s) 131, 307, 1013
Ple19I CGATCG 1 cut(s) 295
PleI GAGTC 6 cut(s) 526, 829, 929, 1037, 1515, 2047
PluTI GGCGCC 2 cut(s) 81, 408
PpsI GAGTC 6 cut(s) 526, 829, 929, 1037, 1515, 2047
PpuMI RGGWCCY 1 cut(s) 315
PscI ACATGT 3 cut(s) 1021, 1270, 2440
Psp124BI GAGCTC 1 cut(s) 439
Psp1406I AACGTT 2 cut(s) 1251, 2517
Psp5II RGGWCCY 1 cut(s) 315
Psp6I CCWGG 4 cut(s) 311, 926, 2187, 2552
PspGI CCWGG 4 cut(s) 311, 926, 2187, 2552
PspN4I GGNNCC 3 cut(s) 79, 406, 1839
PspPI GGNCC 2 cut(s) 315, 2486
PspPPI RGGWCCY 1 cut(s) 315
PstNI CAGNNNCTG 1 cut(s) 253
PsuI RGATCY 7 cut(s) 153, 587, 874, 1053, 1600, 1837, 2611
PsyI GACNNNGTC 3 cut(s) 131, 307, 1013
PvuI CGATCG 1 cut(s) 295
PvuII CAGCTG 1 cut(s) 253
RsaI GTAC 7 cut(s) 718, 849, 890, 1182, 1634, 2018, 2159
RsaNI GTAC 7 cut(s) 717, 848, 889, 1181, 1633, 2017, 2158
RseI CAYNNNNRTG 3 cut(s) 1026, 1954, 2371
SacI GAGCTC 1 cut(s) 439
SalI GTCGAC 1 cut(s) 125
SaqAI TTAA 8 cut(s) 803, 978, 1154, 1386, 1538, 1695, 1730, 2025
Sau96I GGNCC 2 cut(s) 315, 2486
SchI GAGTC 6 cut(s) 527, 830, 929, 1037, 1515, 2048
ScrFI CCNGG 5 cut(s) 313, 899, 928, 2189, 2554
SduI GDGCHC 3 cut(s) 439, 811, 1231
SfaNI GCATC 5 cut(s) 667, 992, 1285, 1312, 2556
SfoI GGCGCC 2 cut(s) 79, 406
SinI GGWCC 1 cut(s) 315
SmiMI CAYNNNNRTG 3 cut(s) 1026, 1954, 2371
SmlI CTYRAG 3 cut(s) 1385, 2218, 2479
SmoI CTYRAG 3 cut(s) 1385, 2218, 2479
SspDI GGCGCC 2 cut(s) 77, 404
SspMI CTAG 5 cut(s) 56, 441, 1571, 1683, 2409
SstI GAGCTC 1 cut(s) 439
StyD4I CCNGG 5 cut(s) 311, 897, 926, 2187, 2552
StyI CCWWGG 5 cut(s) 60, 318, 440, 914, 1558
TaaI ACNGT 9 cut(s) 286, 801, 1013, 1178, 1238, 1737, 1746, 1834, 2078
TaiI ACGT 5 cut(s) 557, 604, 1254, 1896, 2520
TatI WGTACW 4 cut(s) 847, 1180, 1632, 2016
TauI GCSGC 6 cut(s) 68, 162, 194, 387, 496, 2074
TfiI GAWTC 4 cut(s) 334, 348, 611, 859
Tru1I TTAA 8 cut(s) 803, 978, 1154, 1386, 1538, 1695, 1730, 2025
Tru9I TTAA 8 cut(s) 803, 978, 1154, 1386, 1538, 1695, 1730, 2025
TscAI CASTG 5 cut(s) 998, 1093, 1839, 2081, 2389
TseFI GTSAC 3 cut(s) 1828, 2211, 2390
TseI GCWGC 8 cut(s) 120, 247, 250, 253, 361, 712, 2108, 2363
Tsp45I GTSAC 3 cut(s) 1828, 2211, 2390
TspGWI ACGGA 1 cut(s) 159
TspRI CASTG 5 cut(s) 998, 1093, 1839, 2081, 2389
Tth111I GACNNNGTC 3 cut(s) 131, 307, 1013
Vha464I CTTAAG 1 cut(s) 1385
VneI GTGCAC 2 cut(s) 807, 1227
VpaK11BI GGWCC 1 cut(s) 315
XagI CCTNNNNNAGG 2 cut(s) 1874, 2192
XapI RAATTY 5 cut(s) 789, 1843, 1967, 2063, 2413
XceI RCATGY 4 cut(s) 1025, 1274, 1942, 2444
XcmI CCANNNNNNNNNTGG 1 cut(s) 544
XmaJI CCTAGG 1 cut(s) 440
XmiI GTMKAC 3 cut(s) 126, 1899, 1912
XmnI GAANNNNTTC 2 cut(s) 793, 1967
XspI CTAG 5 cut(s) 56, 441, 1571, 1683, 2409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.