Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001592

Physical Location & Seq

Genomic Coordinates Reverse (-)

39658391 .. 39664751

Gene Structure 6361 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024843

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2484 bp

ATGGAGTCATACGCGGTACATTTGGCCATGGCGGCTCTCGTCGGGGCGTCGCTGGTGGCCGTCTCGGCTTACTACATGCACCGGAAGACCTTAACTCAGCTGCTGGAGTTTGCGAAGACGGTGGAGAGGGAGAGGGAGCGGGAGGAGAACTCCGACGGAGGCGGCGGCGGGGACTCGCCGCAGCACATGAAGAAGCGTAAGGGACACGGGCGGCGCAAGGGCGGCGGGTATTACAGGCGTGGCTCGGCTTCGTTGCCGGACGTTACGACGATTTCCGGCGGGGTTGACGGGAACGGAATGGTGGACGGTATTCCGGCTGGGTTGCCGAGGCTGCACACACTTCCGGAAGGAAAATCGGCTCAGCCAGTGAATTCAGCTAAGAGAACTGGTATCAGACCTGTTTCTCCCAAGTCTCCAGTTGCAAGCGCTAGTGCCTTTGAGAGCGTTGAAGGTTCGGATGATGAAGATAATTTGACTGACAATGCTAAGGGGCCAGATTTACCAAACCATGTTACTGCCAATGGAGAGCAAATTGCTATAGCTGCTTCAAGTATGATTAGGTCCCATTCTGTATCTGGTGATCTGCATGGTGTCCAGCCTGATCCAATTGCAGCTGACATTCTAAGGAAAGAGCCTGAGCAAGAAACTTTTGCACGACTAAAAATTACTCCTACTGAAGTACCATCACCTGATGAAATAGAGGTCTATGTGGTTCTTCAAGAATGCCTTGAATTGCGAAAGAGATATGTATTCAGTGAGGCAGTTGCTCCATGGGAGAGGGAAGTTATATCTGATCCCAGTACCCCAAAGCCTAACCCAGAACCATTTTTCTACGCTTCTGAGTTAAAGTCTGATCATCATTTTGAGATGCAAGATGGAGTAATTCACGTGTATCCACATAAAGATTCAAAAGAAGAGCTTTATCCTGTTGCTGATGCAACTACCTTTTTCACTGACCTTCACCACATACTTAGAGTTATAGCAGCAGGGAATATCAGAACTTTATGCCATCATCGCTTGAATCTTCTGGAACAGAAATTCAATCTTCACTTAATGCTTAATGCGGATAAGGAATTTCTGGCCCAGAAAAGTGCTCCACATCGTGACTTTTATAATGTTAGGAAAGTTGATACCCATGTTCATCACTCGGCATGCATGAACCAGAAGCATCTTTTGAGGTTTATAAAGTCAAAGTTGAGGAAGGAGCCTGATGAGGTTGTAATATTTCGAGATGGCACCTATTTGACCTTGAGAGAAGTTTTTGAGAGTCTGGATTTGACTGGGTACGACCTGAATGTGGACCTTTTGGATGTTCATGCAGACAAAAGCACATTTCATCGTTTTGATAAGTTCAATCTCAAGTACAACCCCTGTGGTCAAAGTAGGCTCAGGGAGATTTTCCTTAAGCAGGATAATCTTATCCAAGGCCGTTTCCTTGCTGAGCTGACAAAGCAAGTGTTCTCTGATCTTTCTGCCAGTAAATATCAGATGGCTGAGTACAGAATATCAATATATGGCAGGAAGCAAAGTGAGTGGGACCAAATGGCTAGTTGGATAGTGAACAATGAATTGTACAGTGAGAATGTTGTATGGTTGATACAGCTGCCACGGTTGTACAATATATACAAGGAAATGGGGATAGTGACATCATTTCAGAACATTCTTGACAATATCTTTATACCGCTGTTTGAGGTTACCATAAATCCAGATTCCCATCCACAGTTGCATGTTTTTCTTAAACAGGTTGTTGGGTTAGATTTGGTCGATGATGAAAGCAAACCTGAAAGACGGCCCACAAAACACATGCCAACTCCAGCACAATGGACAAATGTTTTCAATCCTGCATTTTCATACTATGTGTACTATTGTTATGCTAATCTCTACACATTAAACAAGCTTCGTGAATCAAAGGGCATGACAACCATCAAATTCCGTCCACATTCTGGGGAGGCTGGGGACATTGACCACCTTGCTGCAACGTTCCTTACCGCGACTAACATCGCTCACGGAATCAATTTGAGGAAGTCTCCTGTGCTTCAATATCTGTATTATTTAGCTCAGATTGGTCTGGCTATGTCACCCCTGAGCAACAATTCATTGTTCTTGGACTACCATCGCAACCCTTTTCCCATATTTTTCTTACGGGGTCTTAATGTCTCTCTCTCTACTGATGATCCTCTTCAAATCCACTTAACGAAAGAACCCTTGGTAGAAGAATATAGTATAGCTGCTTCTGTATGGAAATTGAGTTCATGTGATCTATGTGAAATTGCCCGTAATTCAGTTTACCAGTCAGGTTTCTCACATGCTCTGAAGTCACACTGGATTGGGAGAGAGTATTACAAGAGAGGACCAGATGGAAATGATATCCACAAAACAAACGTTCCTCATATCCGGGTGGAATTCCGGGAAACGATCTGGAGGGAGGAGATGAAACAGGTTTATATTGGCAAGGCTATTATCCCCAGAGAAGTTGACAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005829 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0010033 GO:0010154 GO:0016020 GO:0016021 GO:0019867 GO:0019899 GO:0019900 GO:0019901 GO:0022414 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032501 GO:0032502 GO:0032592 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043424 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0097305 GO:0098573 GO:0098588 GO:0098805 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130

Pfam Domains

Protein Families

A_deaminase

Protein Analysis

828

Amino Acids

94.09

Weight (kDa)

6.54

Isoelectric Point (pI)

45.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP_deaminase	PF19326	223 - 814	0.0	AMP deaminase
A_deaminase	PF00962	642 - 768	2.8e-09	Adenosine deaminase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38280 AT2G38280
fragaria_vesca	FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200
malus_domestica	MD00G1061700.v1.1 MD12G1171800.v1.1 MD13G1080600.v1.1
prunus_persica	Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.6G280000_v2.0.a1
pyrus_communis	pycom04g14260 pycom13g06970
rosa_chinensis	RchiOBHm_Chr3g0462681 RchiOBHm_Chr4g0445291 RchiOBHm_Chr6g0271931
rosa_laevigata	RLG00000005751 RLG00000024843
rosa_multiflora	Rmu_sc0000050.1_g000023 Rmu_sc0011057.1_g000004
rosa_roxburghii	Rroxscaffold_5G00385800 Rroxscaffold_6G00417300
rosa_rugosa	Rorug03G0058500 Rorug04G0360200 Rorug04G0360300
rosa_samantha	Rh3AG116500 Rh3BG120100 Rh3CG123300 Rh3DG122100 Rh4AG421600 Rh4BG433500 Rh4CG448200 Rh4DG429500
rosa_wichuraiana	Rw3G009860 Rw4G036160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1113, 1184
AccB1I	GGYRCC	1 cut(s)	1235
AccB7I	CCANNNNNTGG	1 cut(s)	1943
AccBSI	CCGCTC	1 cut(s)	139
AccII	CGCG	2 cut(s)	14, 1991
AccIII	TCCGGA	1 cut(s)	343
AclI	AACGTT	2 cut(s)	1979, 2382
AclWI	GGATC	3 cut(s)	596, 788, 2168
AcoI	YGGCCR	2 cut(s)	24, 57
AcsI	RAATTY	5 cut(s)	370, 1037, 1073, 1928, 2402
AcuI	CTGAAG	2 cut(s)	696, 2333
AcvI	CACGTG	1 cut(s)	889
AcyI	GRCGYC	1 cut(s)	47
AdeI	CACNNNGTG	1 cut(s)	1103
AfaI	GTAC	9 cut(s)	18, 681, 802, 1286, 1364, 1499, 1574, 1616, 1862
AfeI	AGCGCT	1 cut(s)	427
AfiI	CCNNNNNNNGG	3 cut(s)	1297, 1408, 1943
AflII	CTTAAG	1 cut(s)	1403
AflIII	ACRYGT	1 cut(s)	888
AjuI	GAANNNNNNNTTGG	2 cut(s)	2189, 2221
AloI	GAACNNNNNNTCC	2 cut(s)	2233, 2265
Alw21I	GWGCWC	1 cut(s)	1096
Alw26I	GTCTC	4 cut(s)	67, 417, 2031, 2161
AlwI	GGATC	3 cut(s)	596, 788, 2168
AlwNI	CAGNNNCTG	1 cut(s)	103
Aor13HI	TCCGGA	1 cut(s)	343
Aor51HI	AGCGCT	1 cut(s)	427
AoxI	GGCC	6 cut(s)	24, 57, 491, 1080, 1426, 1790
ApeKI	GCWGC	9 cut(s)	100, 181, 331, 542, 611, 983, 1603, 1973, 2228
ApoI	RAATTY	5 cut(s)	370, 1037, 1073, 1928, 2402
AspLEI	GCGC	2 cut(s)	216, 428
AspS9I	GGNCC	7 cut(s)	491, 561, 1081, 1300, 1537, 1791, 2351
AsuC2I	CCSGG	2 cut(s)	2396, 2408
AsuHPI	GGTGA	4 cut(s)	590, 678, 953, 2070
AvaII	GGWCC	4 cut(s)	561, 1300, 1537, 2351
BaeI	ACNNNNGTAYC	4 cut(s)	663, 696, 1122, 1155
BalI	TGGCCA	1 cut(s)	26
BanI	GGYRCC	1 cut(s)	1235
BarI	GAAGNNNNNNTAC	2 cut(s)	2215, 2247
BbrPI	CACGTG	1 cut(s)	889
BbsI	GAAGAC	2 cut(s)	92, 122
Bbv12I	GWGCWC	1 cut(s)	1096
BbvI	GCAGC	9 cut(s)	87, 193, 318, 529, 623, 995, 1590, 1960, 2215
BccI	CCATC	9 cut(s)	691, 869, 1017, 1226, 1483, 1722, 1931, 2121, 2351
BceAI	ACGGC	3 cut(s)	44, 1413, 1805
BciVI	GTATCC	1 cut(s)	903
BclI	TGATCA	1 cut(s)	853
BcnI	CCSGG	2 cut(s)	2396, 2408
BcoDI	GTCTC	4 cut(s)	67, 417, 2031, 2161
BfaI	CTAG	2 cut(s)	429, 1548
BfmI	CTRYAG	1 cut(s)	537
BfoI	RGCGCY	1 cut(s)	429
BfrI	CTTAAG	1 cut(s)	1403
BfuI	GTATCC	1 cut(s)	903
BglI	GCCNNNNNGGC	2 cut(s)	32, 65
BlpI	GCTNAGC	2 cut(s)	360, 1440
Bme1390I	CCNGG	2 cut(s)	2396, 2408
Bme18I	GGWCC	4 cut(s)	561, 1300, 1537, 2351
BmgT120I	GGNCC	7 cut(s)	491, 561, 1081, 1300, 1537, 1791, 2351
BmiI	GGNNCC	5 cut(s)	492, 563, 1206, 1237, 1538
BmrFI	CCNGG	2 cut(s)	2396, 2408
BmrI	ACTGGG	2 cut(s)	792, 1290
BmsI	GCATC	3 cut(s)	858, 925, 1177
BmuI	ACTGGG	2 cut(s)	792, 1290
BpiI	GAAGAC	2 cut(s)	92, 122
BplI	GAGNNNNNCTC	4 cut(s)	134, 166, 2011, 2043
BpmI	CTGGAG	4 cut(s)	125, 399, 1797, 2440
Bpu10I	CCTNAGC	4 cut(s)	486, 636, 1388, 2084
Bpu1102I	GCTNAGC	2 cut(s)	360, 1440
BpuEI	CTTGAG	2 cut(s)	1270, 1343
BpuMI	CCSGG	2 cut(s)	2396, 2408
BsaAI	YACGTR	1 cut(s)	889
BsaBI	GATNNNNATC	1 cut(s)	1713
BsaHI	GRCGYC	1 cut(s)	47
BsaJI	CCNNGG	6 cut(s)	27, 326, 770, 1423, 1607, 2205
BsaWI	WCCGGW	2 cut(s)	81, 343
Bsc4I	CCNNNNNNNGG	3 cut(s)	1297, 1408, 1943
Bse1I	ACTGG	8 cut(s)	365, 391, 416, 798, 1285, 1476, 2290, 2327
Bse8I	GATNNNNATC	1 cut(s)	1713
BseAI	TCCGGA	1 cut(s)	343
BseDI	CCNNGG	6 cut(s)	27, 326, 770, 1423, 1607, 2205
BseGI	GGATG	3 cut(s)	463, 1315, 1714
BseJI	GATNNNNATC	1 cut(s)	1713
BseLI	CCNNNNNNNGG	3 cut(s)	1297, 1408, 1943
BseMII	CTCAG	9 cut(s)	110, 374, 627, 831, 1402, 1431, 1485, 2072, 2075
BseNI	ACTGG	8 cut(s)	365, 391, 416, 798, 1285, 1476, 2290, 2327
BseRI	GAGGAG	2 cut(s)	158, 2441
BseXI	GCAGC	9 cut(s)	87, 193, 318, 529, 623, 995, 1590, 1960, 2215
BseYI	CCCAGC	2 cut(s)	317, 1952
BsgI	GTGCAG	1 cut(s)	317
Bsh1236I	CGCG	2 cut(s)	14, 1991
BshFI	GGCC	6 cut(s)	26, 59, 493, 1082, 1428, 1792
BshNI	GGYRCC	1 cut(s)	1235
BsiHKAI	GWGCWC	1 cut(s)	1096
BsiSI	CCGG	7 cut(s)	82, 257, 276, 314, 344, 2395, 2407
BslFI	GGGAC	5 cut(s)	185, 216, 547, 1550, 1970
BslI	CCNNNNNNNGG	3 cut(s)	1297, 1408, 1943
BsmAI	GTCTC	4 cut(s)	67, 417, 2031, 2161
BsmBI	CGTCTC	1 cut(s)	67
BsmFI	GGGAC	5 cut(s)	185, 216, 547, 1550, 1970
BsmI	GAATGC	1 cut(s)	728
BsnI	GGCC	6 cut(s)	26, 59, 493, 1082, 1428, 1792
Bsp1286I	GDGCHC	1 cut(s)	1096
Bsp13I	TCCGGA	1 cut(s)	343
Bsp1407I	TGTACA	2 cut(s)	1572, 1614
Bsp143I	GATC	8 cut(s)	580, 601, 793, 853, 1465, 2173, 2257, 2415
Bsp1720I	GCTNAGC	2 cut(s)	360, 1440
Bsp19I	CCATGG	2 cut(s)	27, 770
BspANI	GGCC	6 cut(s)	26, 59, 493, 1082, 1428, 1792
BspCNI	CTCAG	9 cut(s)	109, 373, 628, 832, 1401, 1432, 1486, 2071, 2076
BspEI	TCCGGA	1 cut(s)	343
BspFNI	CGCG	2 cut(s)	14, 1991
BspLI	GGNNCC	5 cut(s)	492, 563, 1206, 1237, 1538
BspPI	GGATC	3 cut(s)	596, 788, 2168
BspQI	GCTCTTC	1 cut(s)	909
BspT107I	GGYRCC	1 cut(s)	1235
BspTI	CTTAAG	1 cut(s)	1403
BsrBI	CCGCTC	1 cut(s)	139
BsrGI	TGTACA	2 cut(s)	1572, 1614
BsrI	ACTGG	8 cut(s)	365, 391, 416, 798, 1285, 1476, 2290, 2327
BssECI	CCNNGG	6 cut(s)	27, 326, 770, 1423, 1607, 2205
BssMI	GATC	8 cut(s)	580, 601, 793, 853, 1465, 2173, 2257, 2415
BssNI	GRCGYC	1 cut(s)	47
BssT1I	CCWWGG	4 cut(s)	27, 770, 1423, 2205
Bst4CI	ACNGT	5 cut(s)	121, 308, 1577, 1611, 1722
Bst6I	CTCTTC	2 cut(s)	909, 2184
BstACI	GRCGYC	1 cut(s)	47
BstAFI	CTTAAG	1 cut(s)	1403
BstAUI	TGTACA	2 cut(s)	1572, 1614
BstBAI	YACGTR	1 cut(s)	889
BstC8I	GCNNGC	2 cut(s)	424, 1153
BstDSI	CCRYGG	3 cut(s)	27, 770, 1607
BstEII	GGTNACC	1 cut(s)	1693
BstENI	CCTNNNNNAGG	1 cut(s)	1406
BstF5I	GGATG	3 cut(s)	463, 1315, 1714
BstFNI	CGCG	2 cut(s)	14, 1991
BstH2I	RGCGCY	1 cut(s)	429
BstHHI	GCGC	2 cut(s)	216, 428
BstKTI	GATC	8 cut(s)	583, 604, 796, 856, 1468, 2176, 2260, 2418
BstMAI	GTCTC	4 cut(s)	67, 417, 2031, 2161
BstMBI	GATC	8 cut(s)	580, 601, 793, 853, 1465, 2173, 2257, 2415
BstMWI	GCNNNNNNNGC	7 cut(s)	32, 65, 222, 331, 542, 1014, 1450
BstNSI	RCATGY	5 cut(s)	79, 1155, 1730, 1807, 2309
BstPI	GGTNACC	1 cut(s)	1693
BstSCI	CCNGG	2 cut(s)	2394, 2406
BstSFI	CTRYAG	1 cut(s)	537
BstUI	CGCG	2 cut(s)	14, 1991
BstV1I	GCAGC	9 cut(s)	87, 193, 318, 529, 623, 995, 1590, 1960, 2215
BstV2I	GAAGAC	2 cut(s)	92, 122
BstXI	CCANNNNNNTGG	1 cut(s)	1821
BsuI	GTATCC	1 cut(s)	903
BsuRI	GGCC	6 cut(s)	26, 59, 493, 1082, 1428, 1792
BtgI	CCRYGG	3 cut(s)	27, 770, 1607
BtgZI	GCGATG	3 cut(s)	998, 1984, 2099
BtsCI	GGATG	3 cut(s)	463, 1315, 1714
BtsIMutI	CAGTG	5 cut(s)	372, 760, 951, 1582, 2320
Cac8I	GCNNGC	2 cut(s)	424, 1153
CaiI	CAGNNNCTG	1 cut(s)	103
CfoI	GCGC	2 cut(s)	216, 428
Cfr13I	GGNCC	7 cut(s)	491, 561, 1081, 1300, 1537, 1791, 2351
CseI	GACGC	1 cut(s)	36
Csp6I	GTAC	9 cut(s)	17, 680, 801, 1285, 1363, 1498, 1573, 1615, 1861
CspCI	CAANNNNNGTGG	4 cut(s)	1354, 1389, 1514, 1549
CviQI	GTAC	9 cut(s)	17, 680, 801, 1285, 1363, 1498, 1573, 1615, 1861
DpnI	GATC	8 cut(s)	582, 603, 795, 855, 1467, 2175, 2259, 2417
DpnII	GATC	8 cut(s)	580, 601, 793, 853, 1465, 2173, 2257, 2415
DraIII	CACNNNGTG	1 cut(s)	1103
EaeI	YGGCCR	2 cut(s)	24, 57
Eam1104I	CTCTTC	2 cut(s)	909, 2184
EarI	CTCTTC	2 cut(s)	909, 2184
Eco130I	CCWWGG	4 cut(s)	27, 770, 1423, 2205
Eco32I	GATATC	1 cut(s)	2368
Eco47I	GGWCC	4 cut(s)	561, 1300, 1537, 2351
Eco47III	AGCGCT	1 cut(s)	427
Eco57I	CTGAAG	2 cut(s)	696, 2333
Eco72I	CACGTG	1 cut(s)	889
Eco91I	GGTNACC	1 cut(s)	1693
EcoNI	CCTNNNNNAGG	1 cut(s)	1406
EcoO109I	RGGNCCY	1 cut(s)	561
EcoO65I	GGTNACC	1 cut(s)	1693
EcoRI	GAATTC	2 cut(s)	370, 2402
EcoRV	GATATC	1 cut(s)	2368
EcoT14I	CCWWGG	4 cut(s)	27, 770, 1423, 2205
EcoT22I	ATGCAT	1 cut(s)	1157
ErhI	CCWWGG	4 cut(s)	27, 770, 1423, 2205
Esp3I	CGTCTC	1 cut(s)	67
FalI	AAGNNNNNCTT	4 cut(s)	711, 743, 903, 935
FaqI	GGGAC	5 cut(s)	185, 216, 547, 1550, 1970
FauI	CCCGC	4 cut(s)	132, 161, 218, 272
FbaI	TGATCA	1 cut(s)	853
FokI	GGATG	3 cut(s)	470, 1322, 1701
FspBI	CTAG	2 cut(s)	429, 1548
GlaI	GCGC	2 cut(s)	215, 427
GsaI	CCCAGC	2 cut(s)	321, 1956
GsuI	CTGGAG	4 cut(s)	125, 399, 1797, 2440
HaeII	RGCGCY	1 cut(s)	429
HaeIII	GGCC	6 cut(s)	26, 59, 493, 1082, 1428, 1792
HapII	CCGG	7 cut(s)	82, 257, 276, 314, 344, 2395, 2407
HgaI	GACGC	1 cut(s)	36
HhaI	GCGC	2 cut(s)	216, 428
Hin1I	GRCGYC	1 cut(s)	47
Hin6I	GCGC	2 cut(s)	214, 426
HinP1I	GCGC	2 cut(s)	214, 426
HincII	GTYRAC	2 cut(s)	286, 2476
HindII	GTYRAC	2 cut(s)	286, 2476
HindIII	AAGCTT	1 cut(s)	1895
HinfI	GANTC	8 cut(s)	5, 173, 905, 1021, 1267, 1709, 1904, 2010
HpaII	CCGG	7 cut(s)	82, 257, 276, 314, 344, 2395, 2407
HphI	GGTGA	4 cut(s)	590, 678, 953, 2070
Hpy166II	GTNNAC	8 cut(s)	286, 304, 1300, 1561, 1861, 1937, 2287, 2476
Hpy8I	GTNNAC	8 cut(s)	286, 304, 1300, 1561, 1861, 1937, 2287, 2476
Hpy99I	CGWCG	4 cut(s)	44, 52, 158, 271
HpyAV	CCTTC	4 cut(s)	341, 443, 968, 1195
HpyCH4III	ACNGT	5 cut(s)	121, 308, 1577, 1611, 1722
HpyCH4IV	ACGT	4 cut(s)	261, 888, 1979, 2382
HpyF10VI	GCNNNNNNNGC	7 cut(s)	32, 65, 222, 331, 542, 1014, 1450
HpySE526I	ACGT	4 cut(s)	261, 888, 1979, 2382
Hsp92I	GRCGYC	1 cut(s)	47
HspAI	GCGC	2 cut(s)	214, 426
Kpn2I	TCCGGA	1 cut(s)	343
Ksp22I	TGATCA	1 cut(s)	853
Kzo9I	GATC	8 cut(s)	580, 601, 793, 853, 1465, 2173, 2257, 2415
LguI	GCTCTTC	1 cut(s)	909
LmnI	GCTCC	4 cut(s)	136, 772, 1099, 1204
Lsp1109I	GCAGC	9 cut(s)	87, 193, 318, 529, 623, 995, 1590, 1960, 2215
LweI	GCATC	3 cut(s)	858, 925, 1177
MaeI	CTAG	2 cut(s)	429, 1548
MaeII	ACGT	4 cut(s)	261, 888, 1979, 2382
MaeIII	GTNAC	7 cut(s)	262, 511, 1103, 1642, 1693, 2076, 2316
MalI	GATC	8 cut(s)	582, 603, 795, 855, 1467, 2175, 2259, 2417
MbiI	CCGCTC	1 cut(s)	139
MboI	GATC	8 cut(s)	580, 601, 793, 853, 1465, 2173, 2257, 2415
MfeI	CAATTG	1 cut(s)	606
MhlI	GDGCHC	1 cut(s)	1096
MlsI	TGGCCA	1 cut(s)	26
MluNI	TGGCCA	1 cut(s)	26
MlyI	GAGTC	3 cut(s)	14, 167, 1276
MmeI	TCCRAC	2 cut(s)	177, 1532
Mox20I	TGGCCA	1 cut(s)	26
Mph1103I	ATGCAT	1 cut(s)	1157
MroI	TCCGGA	1 cut(s)	343
MscI	TGGCCA	1 cut(s)	26
MseI	TTAA	9 cut(s)	92, 845, 1052, 1059, 1404, 1737, 1889, 2151, 2192
Msp20I	TGGCCA	1 cut(s)	26
MspA1I	CMGCKG	4 cut(s)	100, 614, 1603, 1684
MspCI	CTTAAG	1 cut(s)	1403
MspI	CCGG	7 cut(s)	82, 257, 276, 314, 344, 2395, 2407
MspR9I	CCNGG	2 cut(s)	2396, 2408
MunI	CAATTG	1 cut(s)	606
Mva1269I	GAATGC	1 cut(s)	728
MvnI	CGCG	2 cut(s)	14, 1991
MwoI	GCNNNNNNNGC	7 cut(s)	32, 65, 222, 331, 542, 1014, 1450
NciI	CCSGG	2 cut(s)	2396, 2408
NcoI	CCATGG	2 cut(s)	27, 770
NdeII	GATC	8 cut(s)	580, 601, 793, 853, 1465, 2173, 2257, 2415
NlaIV	GGNNCC	5 cut(s)	492, 563, 1206, 1237, 1538
NmeAIII	GCCGAG	4 cut(s)	44, 224, 351, 1127
NmuCI	GTSAC	4 cut(s)	1103, 1642, 2076, 2316
NsiI	ATGCAT	1 cut(s)	1157
NspI	RCATGY	5 cut(s)	79, 1155, 1730, 1807, 2309
PaeI	GCATGC	1 cut(s)	1155
PciSI	GCTCTTC	1 cut(s)	909
PctI	GAATGC	1 cut(s)	728
PfeI	GAWTC	5 cut(s)	905, 1021, 1709, 1904, 2010
PflMI	CCANNNNNTGG	1 cut(s)	1943
PfoI	TCCNGGA	1 cut(s)	2406
PleI	GAGTC	3 cut(s)	13, 167, 1275
PmaCI	CACGTG	1 cut(s)	889
PmlI	CACGTG	1 cut(s)	889
PpsI	GAGTC	3 cut(s)	13, 167, 1275
Ppu21I	YACGTR	1 cut(s)	889
PpuMI	RGGWCCY	1 cut(s)	561
PsiI	TTATAA	2 cut(s)	1113, 1184
Psp1406I	AACGTT	2 cut(s)	1979, 2382
Psp5II	RGGWCCY	1 cut(s)	561
PspCI	CACGTG	1 cut(s)	889
PspEI	GGTNACC	1 cut(s)	1693
PspFI	CCCAGC	2 cut(s)	317, 1952
PspN4I	GGNNCC	5 cut(s)	492, 563, 1206, 1237, 1538
PspPI	GGNCC	7 cut(s)	491, 561, 1081, 1300, 1537, 1791, 2351
PspPPI	RGGWCCY	1 cut(s)	561
PstNI	CAGNNNCTG	1 cut(s)	103
PvuII	CAGCTG	3 cut(s)	100, 614, 1603
RsaI	GTAC	9 cut(s)	18, 681, 802, 1286, 1364, 1499, 1574, 1616, 1862
RsaNI	GTAC	9 cut(s)	17, 680, 801, 1285, 1363, 1498, 1573, 1615, 1861
SapI	GCTCTTC	1 cut(s)	909
SaqAI	TTAA	9 cut(s)	92, 845, 1052, 1059, 1404, 1737, 1889, 2151, 2192
Sau3AI	GATC	8 cut(s)	580, 601, 793, 853, 1465, 2173, 2257, 2415
Sau96I	GGNCC	7 cut(s)	491, 561, 1081, 1300, 1537, 1791, 2351
SchI	GAGTC	3 cut(s)	14, 167, 1276
ScrFI	CCNGG	2 cut(s)	2396, 2408
SduI	GDGCHC	1 cut(s)	1096
SfaNI	GCATC	3 cut(s)	858, 925, 1177
SfcI	CTRYAG	1 cut(s)	537
SinI	GGWCC	4 cut(s)	561, 1300, 1537, 2351
SmlI	CTYRAG	3 cut(s)	1249, 1358, 1403
SmoI	CTYRAG	3 cut(s)	1249, 1358, 1403
SphI	GCATGC	1 cut(s)	1155
SspI	AATATT	1 cut(s)	1224
SspMI	CTAG	2 cut(s)	429, 1548
StyD4I	CCNGG	2 cut(s)	2394, 2406
StyI	CCWWGG	4 cut(s)	27, 770, 1423, 2205
TaaI	ACNGT	5 cut(s)	121, 308, 1577, 1611, 1722
TaiI	ACGT	4 cut(s)	264, 891, 1982, 2385
TaqI	TCGA	2 cut(s)	1228, 1764
TatI	WGTACW	5 cut(s)	1362, 1497, 1572, 1614, 1860
TauI	GCSGC	6 cut(s)	35, 165, 168, 181, 214, 225
TfiI	GAWTC	5 cut(s)	905, 1021, 1709, 1904, 2010
Tru1I	TTAA	9 cut(s)	92, 845, 1052, 1059, 1404, 1737, 1889, 2151, 2192
Tru9I	TTAA	9 cut(s)	92, 845, 1052, 1059, 1404, 1737, 1889, 2151, 2192
TscAI	CASTG	5 cut(s)	372, 760, 958, 1582, 2327
TseFI	GTSAC	4 cut(s)	1103, 1642, 2076, 2316
TseI	GCWGC	9 cut(s)	100, 181, 331, 542, 611, 983, 1603, 1973, 2228
Tsp45I	GTSAC	4 cut(s)	1103, 1642, 2076, 2316
TspGWI	ACGGA	4 cut(s)	171, 309, 1922, 2022
TspRI	CASTG	5 cut(s)	372, 760, 958, 1582, 2327
Van91I	CCANNNNNTGG	1 cut(s)	1943
Vha464I	CTTAAG	1 cut(s)	1403
VpaK11BI	GGWCC	4 cut(s)	561, 1300, 1537, 2351
XagI	CCTNNNNNAGG	1 cut(s)	1406
XapI	RAATTY	5 cut(s)	370, 1037, 1073, 1928, 2402
XceI	RCATGY	5 cut(s)	79, 1155, 1730, 1807, 2309
XcmI	CCANNNNNNNNNTGG	1 cut(s)	572
XspI	CTAG	2 cut(s)	429, 1548
Zsp2I	ATGCAT	1 cut(s)	1157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.