Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0001592

Physical Location & Seq

Genomic Coordinates Forward (+)

9489835 .. 9496247

Gene Structure 6413 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G009860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGGAGTCGTACGCGGTACATTTGGCCATGGCGGCTCTCGTCGGGGCGTCGCTGGTGGCCGTCTCGGCTTACTACATGCACCGGAAGACCCTAACTCAGCTGCTGGAGTTTGCGAAGACGGTGGAGAGGGAGAGGGAGCGGGAGGAGAACTCCGATGGAGGCGGCGGCGGCGGGGACTCGCCGCAGCACATGAAGAAGCGTAAGGGACACGGGCGGCGCAAAGGCGGCGGGTATTACCGGCGTGGCTCGGCCTCTTTGCCGGACGTTACGGCGATTTCCGGCGGGGTTGACGGGAATGGAATGGTGGACGGTATTCCGGCTGGGTTGCCGAGGCTGCACACGCTTCCGGAAGGAAAATCGGCTGAGCCGGTGGGTTCAGCTAAGAGAACTAGTATCAGACCTATTTCTCCCAAGTCTCCAGTTGCAAGCGCTAGTGCCTTTGAGAGCGTTGAAGGTTCGGATGATGAAGATAATTTGACTGACAATGCTAAGGGGCCAGATTTACCAAACCATGTTACTGCCAATGGAGAGCAAATTGCTATAGCTGCTTCAAGTATGATTAGGTCCCATTCTGTATCTGGTGATCTGCATGGTGTCCAGCCTGATCCAATTGCAGCTGACATTCTAAGGAAAGAGCCTGAGCAAGAAACTTTTGCACGACTAAAAATTACTCCTACTGAAGTACCATCACCTGATGAAATAGAGGTTTATGTGGTTCTTCAAGAATGCCTTGAAATGCGAAAGAGATATGTATTCAGTGAGGCAGTTGCTCCATGGGAGAGGGAAGTTATATCTGATCCCAGTACCCCAAAGCCTAACCCAGAACCATTTTTCTACGCTTCTGAGGGAAAGTCTGATCATCATTTTGAAATGCAAGATGGAGTAATTCACGTGTATCCACATAAAGATTCAAAAGAAGAGCTTTATCCTGTTGCTGATGCAACTACCTTTTTCACTGACCTTCACCACATACTTAGAGTTATAGCAGCAGGGAATATCAGAACTTTATGCCATCATCGCTTGAATCTTTGGAACAATGCTCCACATCGTGACTTTTATAACGTTAGGAAAGTTGATACCCATGTTCATCACTCGGCATGCATGAACCAGAAGCATCTTTTGAGGTTTATAAAGTCAAAGTTGAGGAAGGAGCCTGATGAGGTTGTAATATTTCGAGATGGCACCTATTTGACCTTGAGAGAAGTTTTTGAGAGTCTGGATTTGACTGGGTACGACCTGAATGTGGACCTTTTGGATGTTCATGCAGACAAAAGCACATTTCATCGTTTTGATAAGTTCAATCTCAAGTACAACCCCTGTGGTCAAAGTAGGCTCAGGGAGATTTTCCTTAAGCAGGATAATCTTATCCAAGGCCGTTTCCTTGCTGAGCTGACAAAGCAAGTGTTCTCTGATCTTTCTGCCAGTAAATATCAGATGGCTGAGTACAGAATATCAATATATGGCAGGAAGCAAAGTGAGTGGGACCAAATGGCTAGTTGGATAGTGAACAATGAATTGTACAGTGAGAATGTTGTATGGTTGATACAGCTGCCACGGCTGTACAATATATACAAGGAAATGGGGATAGTGACATCATTTCAGAACATTCTTGACAATATCTTTATACCGCTGTTTGAGGTTACCATAAATCCAGATTCCCATCCACAGTTGCATGTTTTTCTGAAACAGGTTGTTGGGTTAGATTTGGTCGATGATGAAAGCAAACCTGAAAGACGGCCCACAAAACACATGCCAACTCCAGCACAATGGACAAATGTTTTCAATCCTGCATTTTCGTACTATGTGTACTATTGTTATGCTAATCTCTACACATTAAACAAGCTTCGTGAATCGAAGGGCATGACAACCATCAAATTCCGTCCACATTCTGGGGAGGCTGGGGACATTGACCACCTTGCTGCAACGTTTCTTACCGCGACTAACATCGCACACGGAATCAATTTGAGGAAGTCCCCTGTGCTTCAATATCTGTATTATTTAGCTCAGATTGGTCTGGCTATGTCACCCCTGAGCAACAATTCATTGTTCTTGGACTACCATCGCAACCCTTTTCCCATATTTTTCTTACGGGGTCTTAATGTCTCTCTCTCTACTGATGATCCTCTTCAAATCCACTTAACAAAAGAACCCTTGGTAGAAGAATATAGTATAGCTGCTTCTGTATGGAAATTGAGTTCATGTGATCTATGTGAAATTGCCCGTAATTCAGTTTACCAGTCAGGTTTCTCACATGCTCTGAAGTCACACTGGATTGGGAGAGAGTATTACAAGAGAGGACCAGATGGAAATGATATCCACAAAACAAACGTTCCTCATATCCGGGTGGAATTCCGGGAAACGATCTGGAGGGAGGAGATGAAACAGGTTTATATTGGCAAGGCTATTATCCCCAGAGAAGTTGACAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005829 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0010033 GO:0010154 GO:0016020 GO:0016021 GO:0019867 GO:0019899 GO:0019900 GO:0019901 GO:0022414 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032501 GO:0032502 GO:0032592 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043424 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0097305 GO:0098573 GO:0098588 GO:0098805 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130

Pfam Domains

Protein Families

A_deaminase

Protein Analysis

809

Amino Acids

91.88

Weight (kDa)

6.47

Isoelectric Point (pI)

46.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP_deaminase	PF19326	224 - 796	1.4e-290	AMP deaminase
A_deaminase	PF00962	624 - 750	2.7e-09	Adenosine deaminase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38280 AT2G38280
fragaria_vesca	FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200
malus_domestica	MD00G1061700.v1.1 MD12G1171800.v1.1 MD13G1080600.v1.1
prunus_persica	Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.6G280000_v2.0.a1
pyrus_communis	pycom04g14260 pycom13g06970
rosa_chinensis	RchiOBHm_Chr3g0462681 RchiOBHm_Chr4g0445291 RchiOBHm_Chr6g0271931
rosa_laevigata	RLG00000005751 RLG00000024843
rosa_multiflora	Rmu_sc0000050.1_g000023 Rmu_sc0011057.1_g000004
rosa_roxburghii	Rroxscaffold_5G00385800 Rroxscaffold_6G00417300
rosa_rugosa	Rorug03G0058500 Rorug04G0360200 Rorug04G0360300
rosa_samantha	Rh3AG116500 Rh3BG120100 Rh3CG123300 Rh3DG122100 Rh4AG421600 Rh4BG433500 Rh4CG448200 Rh4DG429500
rosa_wichuraiana	Rw3G009860 Rw4G036160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1059, 1130
AccB1I	GGYRCC	1 cut(s)	1181
AccB7I	CCANNNNNTGG	1 cut(s)	1889
AccBSI	CCGCTC	1 cut(s)	139
AccII	CGCG	2 cut(s)	14, 1937
AccIII	TCCGGA	1 cut(s)	346
AclI	AACGTT	3 cut(s)	1062, 1925, 2328
AclWI	GGATC	3 cut(s)	599, 791, 2114
AcoI	YGGCCR	2 cut(s)	24, 57
AcsI	RAATTY	2 cut(s)	1874, 2348
AcuI	CTGAAG	2 cut(s)	699, 2279
AcvI	CACGTG	1 cut(s)	892
AcyI	GRCGYC	1 cut(s)	47
AdeI	CACNNNGTG	1 cut(s)	1049
AfeI	AGCGCT	1 cut(s)	430
AfiI	CCNNNNNNNGG	3 cut(s)	1243, 1354, 1889
AflII	CTTAAG	1 cut(s)	1349
AflIII	ACRYGT	1 cut(s)	891
AhlI	ACTAGT	1 cut(s)	389
AloI	GAACNNNNNNTCC	2 cut(s)	2179, 2211
Alw26I	GTCTC	3 cut(s)	67, 420, 2107
AlwI	GGATC	3 cut(s)	599, 791, 2114
AlwNI	CAGNNNCTG	1 cut(s)	103
Aor13HI	TCCGGA	1 cut(s)	346
Aor51HI	AGCGCT	1 cut(s)	430
AoxI	GGCC	6 cut(s)	24, 57, 249, 494, 1372, 1736
ApeKI	GCWGC	9 cut(s)	100, 184, 334, 545, 614, 986, 1549, 1919, 2174
ApoI	RAATTY	2 cut(s)	1874, 2348
AspLEI	GCGC	2 cut(s)	219, 431
AspS9I	GGNCC	6 cut(s)	494, 564, 1246, 1483, 1737, 2297
AsuC2I	CCSGG	2 cut(s)	2342, 2354
AsuHPI	GGTGA	4 cut(s)	593, 681, 956, 2016
AvaII	GGWCC	4 cut(s)	564, 1246, 1483, 2297
BaeI	ACNNNNGTAYC	4 cut(s)	666, 699, 1068, 1101
BalI	TGGCCA	1 cut(s)	26
BanI	GGYRCC	1 cut(s)	1181
BarI	GAAGNNNNNNTAC	2 cut(s)	2161, 2193
BbrPI	CACGTG	1 cut(s)	892
BbsI	GAAGAC	2 cut(s)	92, 122
BbvI	GCAGC	9 cut(s)	87, 196, 321, 532, 626, 998, 1536, 1906, 2161
BceAI	ACGGC	5 cut(s)	44, 285, 1359, 1571, 1751
BciVI	GTATCC	1 cut(s)	906
BclI	TGATCA	1 cut(s)	856
BcnI	CCSGG	2 cut(s)	2342, 2354
BcoDI	GTCTC	3 cut(s)	67, 420, 2107
BcuI	ACTAGT	1 cut(s)	389
BfaI	CTAG	3 cut(s)	390, 432, 1494
BfmI	CTRYAG	1 cut(s)	540
BfoI	RGCGCY	1 cut(s)	432
BfrI	CTTAAG	1 cut(s)	1349
BfuI	GTATCC	1 cut(s)	906
BglI	GCCNNNNNGGC	2 cut(s)	32, 65
BlpI	GCTNAGC	2 cut(s)	363, 1386
Bme1390I	CCNGG	2 cut(s)	2342, 2354
Bme18I	GGWCC	4 cut(s)	564, 1246, 1483, 2297
BmgT120I	GGNCC	6 cut(s)	494, 564, 1246, 1483, 1737, 2297
BmiI	GGNNCC	5 cut(s)	495, 566, 1152, 1183, 1484
BmrFI	CCNGG	2 cut(s)	2342, 2354
BmrI	ACTGGG	2 cut(s)	795, 1236
BmsI	GCATC	2 cut(s)	928, 1123
BmuI	ACTGGG	2 cut(s)	795, 1236
BpiI	GAAGAC	2 cut(s)	92, 122
BplI	GAGNNNNNCTC	2 cut(s)	134, 166
BpmI	CTGGAG	4 cut(s)	125, 402, 1743, 2386
Bpu10I	CCTNAGC	4 cut(s)	489, 639, 1334, 2030
Bpu1102I	GCTNAGC	2 cut(s)	363, 1386
BpuEI	CTTGAG	2 cut(s)	1216, 1289
BpuMI	CCSGG	2 cut(s)	2342, 2354
BsaAI	YACGTR	1 cut(s)	892
BsaBI	GATNNNNATC	1 cut(s)	1659
BsaHI	GRCGYC	1 cut(s)	47
BsaJI	CCNNGG	6 cut(s)	27, 329, 773, 1369, 1553, 2151
BsaWI	WCCGGW	2 cut(s)	81, 346
Bsc4I	CCNNNNNNNGG	3 cut(s)	1243, 1354, 1889
Bse118I	RCCGGY	2 cut(s)	237, 367
Bse1I	ACTGG	6 cut(s)	419, 801, 1231, 1422, 2236, 2273
Bse8I	GATNNNNATC	1 cut(s)	1659
BseAI	TCCGGA	1 cut(s)	346
BseDI	CCNNGG	6 cut(s)	27, 329, 773, 1369, 1553, 2151
BseGI	GGATG	3 cut(s)	466, 1261, 1660
BseJI	GATNNNNATC	1 cut(s)	1659
BseLI	CCNNNNNNNGG	3 cut(s)	1243, 1354, 1889
BseMII	CTCAG	9 cut(s)	110, 354, 630, 834, 1348, 1377, 1431, 2018, 2021
BseNI	ACTGG	6 cut(s)	419, 801, 1231, 1422, 2236, 2273
BseRI	GAGGAG	2 cut(s)	158, 2387
BseXI	GCAGC	9 cut(s)	87, 196, 321, 532, 626, 998, 1536, 1906, 2161
BseYI	CCCAGC	2 cut(s)	320, 1898
BsgI	GTGCAG	1 cut(s)	320
Bsh1236I	CGCG	2 cut(s)	14, 1937
BshFI	GGCC	6 cut(s)	26, 59, 251, 496, 1374, 1738
BshNI	GGYRCC	1 cut(s)	1181
BsiSI	CCGG	9 cut(s)	82, 238, 260, 279, 317, 347, 368, 2341, 2353
BsiWI	CGTACG	1 cut(s)	9
BslFI	GGGAC	6 cut(s)	188, 219, 550, 1496, 1916, 1957
BslI	CCNNNNNNNGG	3 cut(s)	1243, 1354, 1889
BsmAI	GTCTC	3 cut(s)	67, 420, 2107
BsmBI	CGTCTC	1 cut(s)	67
BsmFI	GGGAC	6 cut(s)	188, 219, 550, 1496, 1916, 1957
BsmI	GAATGC	1 cut(s)	731
BsnI	GGCC	6 cut(s)	26, 59, 251, 496, 1374, 1738
Bsp13I	TCCGGA	1 cut(s)	346
Bsp1407I	TGTACA	2 cut(s)	1518, 1560
Bsp143I	GATC	8 cut(s)	583, 604, 796, 856, 1411, 2119, 2203, 2361
Bsp1720I	GCTNAGC	2 cut(s)	363, 1386
Bsp19I	CCATGG	2 cut(s)	27, 773
BspANI	GGCC	6 cut(s)	26, 59, 251, 496, 1374, 1738
BspCNI	CTCAG	9 cut(s)	109, 355, 631, 835, 1347, 1378, 1432, 2017, 2022
BspEI	TCCGGA	1 cut(s)	346
BspFNI	CGCG	2 cut(s)	14, 1937
BspLI	GGNNCC	5 cut(s)	495, 566, 1152, 1183, 1484
BspPI	GGATC	3 cut(s)	599, 791, 2114
BspQI	GCTCTTC	1 cut(s)	912
BspT107I	GGYRCC	1 cut(s)	1181
BspTI	CTTAAG	1 cut(s)	1349
BsrBI	CCGCTC	1 cut(s)	139
BsrFI	RCCGGY	2 cut(s)	237, 367
BsrGI	TGTACA	2 cut(s)	1518, 1560
BsrI	ACTGG	6 cut(s)	419, 801, 1231, 1422, 2236, 2273
BssAI	RCCGGY	2 cut(s)	237, 367
BssECI	CCNNGG	6 cut(s)	27, 329, 773, 1369, 1553, 2151
BssMI	GATC	8 cut(s)	583, 604, 796, 856, 1411, 2119, 2203, 2361
BssNI	GRCGYC	1 cut(s)	47
BssT1I	CCWWGG	4 cut(s)	27, 773, 1369, 2151
Bst4CI	ACNGT	4 cut(s)	121, 311, 1523, 1668
Bst6I	CTCTTC	2 cut(s)	912, 2130
BstACI	GRCGYC	1 cut(s)	47
BstAFI	CTTAAG	1 cut(s)	1349
BstAUI	TGTACA	2 cut(s)	1518, 1560
BstBAI	YACGTR	1 cut(s)	892
BstC8I	GCNNGC	2 cut(s)	427, 1099
BstDSI	CCRYGG	3 cut(s)	27, 773, 1553
BstEII	GGTNACC	1 cut(s)	1639
BstENI	CCTNNNNNAGG	1 cut(s)	1352
BstF5I	GGATG	3 cut(s)	466, 1261, 1660
BstFNI	CGCG	2 cut(s)	14, 1937
BstH2I	RGCGCY	1 cut(s)	432
BstHHI	GCGC	2 cut(s)	219, 431
BstKTI	GATC	8 cut(s)	586, 607, 799, 859, 1414, 2122, 2206, 2364
BstMAI	GTCTC	3 cut(s)	67, 420, 2107
BstMBI	GATC	8 cut(s)	583, 604, 796, 856, 1411, 2119, 2203, 2361
BstNSI	RCATGY	5 cut(s)	79, 1101, 1676, 1753, 2255
BstPI	GGTNACC	1 cut(s)	1639
BstSCI	CCNGG	2 cut(s)	2340, 2352
BstSFI	CTRYAG	1 cut(s)	540
BstUI	CGCG	2 cut(s)	14, 1937
BstV1I	GCAGC	9 cut(s)	87, 196, 321, 532, 626, 998, 1536, 1906, 2161
BstV2I	GAAGAC	2 cut(s)	92, 122
BstXI	CCANNNNNNTGG	1 cut(s)	1767
BsuI	GTATCC	1 cut(s)	906
BsuRI	GGCC	6 cut(s)	26, 59, 251, 496, 1374, 1738
BtgI	CCRYGG	3 cut(s)	27, 773, 1553
BtgZI	GCGATG	3 cut(s)	1001, 1930, 2045
BtsCI	GGATG	3 cut(s)	466, 1261, 1660
BtsIMutI	CAGTG	4 cut(s)	763, 954, 1528, 2266
Cac8I	GCNNGC	2 cut(s)	427, 1099
CaiI	CAGNNNCTG	1 cut(s)	103
CfoI	GCGC	2 cut(s)	219, 431
Cfr10I	RCCGGY	2 cut(s)	237, 367
Cfr13I	GGNCC	6 cut(s)	494, 564, 1246, 1483, 1737, 2297
CseI	GACGC	1 cut(s)	36
CspCI	CAANNNNNGTGG	4 cut(s)	1300, 1335, 1460, 1495
DpnI	GATC	8 cut(s)	585, 606, 798, 858, 1413, 2121, 2205, 2363
DpnII	GATC	8 cut(s)	583, 604, 796, 856, 1411, 2119, 2203, 2361
DraIII	CACNNNGTG	1 cut(s)	1049
EaeI	YGGCCR	2 cut(s)	24, 57
Eam1104I	CTCTTC	2 cut(s)	912, 2130
EarI	CTCTTC	2 cut(s)	912, 2130
Eco130I	CCWWGG	4 cut(s)	27, 773, 1369, 2151
Eco32I	GATATC	1 cut(s)	2314
Eco47I	GGWCC	4 cut(s)	564, 1246, 1483, 2297
Eco47III	AGCGCT	1 cut(s)	430
Eco57I	CTGAAG	2 cut(s)	699, 2279
Eco72I	CACGTG	1 cut(s)	892
Eco91I	GGTNACC	1 cut(s)	1639
EcoNI	CCTNNNNNAGG	1 cut(s)	1352
EcoO109I	RGGNCCY	1 cut(s)	564
EcoO65I	GGTNACC	1 cut(s)	1639
EcoRI	GAATTC	1 cut(s)	2348
EcoRV	GATATC	1 cut(s)	2314
EcoT14I	CCWWGG	4 cut(s)	27, 773, 1369, 2151
EcoT22I	ATGCAT	1 cut(s)	1103
ErhI	CCWWGG	4 cut(s)	27, 773, 1369, 2151
Esp3I	CGTCTC	1 cut(s)	67
FalI	AAGNNNNNCTT	4 cut(s)	714, 746, 906, 938
FaqI	GGGAC	6 cut(s)	188, 219, 550, 1496, 1916, 1957
FauI	CCCGC	4 cut(s)	132, 164, 221, 275
FbaI	TGATCA	1 cut(s)	856
FokI	GGATG	3 cut(s)	473, 1268, 1647
FspBI	CTAG	3 cut(s)	390, 432, 1494
GlaI	GCGC	2 cut(s)	218, 430
GsaI	CCCAGC	2 cut(s)	324, 1902
GsuI	CTGGAG	4 cut(s)	125, 402, 1743, 2386
HaeII	RGCGCY	1 cut(s)	432
HaeIII	GGCC	6 cut(s)	26, 59, 251, 496, 1374, 1738
HapII	CCGG	9 cut(s)	82, 238, 260, 279, 317, 347, 368, 2341, 2353
HgaI	GACGC	1 cut(s)	36
HhaI	GCGC	2 cut(s)	219, 431
Hin1I	GRCGYC	1 cut(s)	47
Hin6I	GCGC	2 cut(s)	217, 429
HinP1I	GCGC	2 cut(s)	217, 429
HincII	GTYRAC	2 cut(s)	289, 2422
HindII	GTYRAC	2 cut(s)	289, 2422
HindIII	AAGCTT	1 cut(s)	1841
HinfI	GANTC	8 cut(s)	5, 176, 908, 1024, 1213, 1655, 1850, 1956
HpaII	CCGG	9 cut(s)	82, 238, 260, 279, 317, 347, 368, 2341, 2353
HphI	GGTGA	4 cut(s)	593, 681, 956, 2016
Hpy166II	GTNNAC	8 cut(s)	289, 307, 1246, 1507, 1807, 1883, 2233, 2422
Hpy188III	TCNNGA	9 cut(s)	347, 722, 1049, 1175, 1217, 1610, 1652, 1847, 2365
Hpy8I	GTNNAC	8 cut(s)	289, 307, 1246, 1507, 1807, 1883, 2233, 2422
Hpy99I	CGWCG	2 cut(s)	44, 52
HpyAV	CCTTC	5 cut(s)	344, 446, 971, 1141, 1849
HpyCH4III	ACNGT	4 cut(s)	121, 311, 1523, 1668
HpyCH4IV	ACGT	5 cut(s)	264, 891, 1062, 1925, 2328
HpySE526I	ACGT	5 cut(s)	264, 891, 1062, 1925, 2328
Hsp92I	GRCGYC	1 cut(s)	47
HspAI	GCGC	2 cut(s)	217, 429
Kpn2I	TCCGGA	1 cut(s)	346
Ksp22I	TGATCA	1 cut(s)	856
Kzo9I	GATC	8 cut(s)	583, 604, 796, 856, 1411, 2119, 2203, 2361
LguI	GCTCTTC	1 cut(s)	912
LmnI	GCTCC	4 cut(s)	136, 775, 1045, 1150
Lsp1109I	GCAGC	9 cut(s)	87, 196, 321, 532, 626, 998, 1536, 1906, 2161
LweI	GCATC	2 cut(s)	928, 1123
MaeI	CTAG	3 cut(s)	390, 432, 1494
MaeII	ACGT	5 cut(s)	264, 891, 1062, 1925, 2328
MaeIII	GTNAC	7 cut(s)	265, 514, 1049, 1588, 1639, 2022, 2262
MalI	GATC	8 cut(s)	585, 606, 798, 858, 1413, 2121, 2205, 2363
MbiI	CCGCTC	1 cut(s)	139
MboI	GATC	8 cut(s)	583, 604, 796, 856, 1411, 2119, 2203, 2361
MboII	GAAGA	8 cut(s)	97, 127, 205, 479, 710, 929, 2117, 2171
MfeI	CAATTG	1 cut(s)	609
MlsI	TGGCCA	1 cut(s)	26
MluNI	TGGCCA	1 cut(s)	26
MlyI	GAGTC	3 cut(s)	14, 170, 1222
MmeI	TCCRAC	1 cut(s)	1478
Mox20I	TGGCCA	1 cut(s)	26
Mph1103I	ATGCAT	1 cut(s)	1103
MroI	TCCGGA	1 cut(s)	346
MscI	TGGCCA	1 cut(s)	26
MseI	TTAA	4 cut(s)	1350, 1835, 2097, 2138
Msp20I	TGGCCA	1 cut(s)	26
MspA1I	CMGCKG	4 cut(s)	100, 617, 1549, 1630
MspCI	CTTAAG	1 cut(s)	1349
MspI	CCGG	9 cut(s)	82, 238, 260, 279, 317, 347, 368, 2341, 2353
MspR9I	CCNGG	2 cut(s)	2342, 2354
MunI	CAATTG	1 cut(s)	609
Mva1269I	GAATGC	1 cut(s)	731
MvnI	CGCG	2 cut(s)	14, 1937
NciI	CCSGG	2 cut(s)	2342, 2354
NcoI	CCATGG	2 cut(s)	27, 773
NdeII	GATC	8 cut(s)	583, 604, 796, 856, 1411, 2119, 2203, 2361
NlaIV	GGNNCC	5 cut(s)	495, 566, 1152, 1183, 1484
NmeAIII	GCCGAG	4 cut(s)	44, 227, 354, 1073
NmuCI	GTSAC	4 cut(s)	1049, 1588, 2022, 2262
NsiI	ATGCAT	1 cut(s)	1103
NspI	RCATGY	5 cut(s)	79, 1101, 1676, 1753, 2255
PaeI	GCATGC	1 cut(s)	1101
PciSI	GCTCTTC	1 cut(s)	912
PctI	GAATGC	1 cut(s)	731
PfeI	GAWTC	5 cut(s)	908, 1024, 1655, 1850, 1956
Pfl23II	CGTACG	1 cut(s)	9
PflMI	CCANNNNNTGG	1 cut(s)	1889
PfoI	TCCNGGA	1 cut(s)	2352
PleI	GAGTC	3 cut(s)	13, 170, 1221
PmaCI	CACGTG	1 cut(s)	892
PmlI	CACGTG	1 cut(s)	892
PpsI	GAGTC	3 cut(s)	13, 170, 1221
Ppu21I	YACGTR	1 cut(s)	892
PpuMI	RGGWCCY	1 cut(s)	564
PsiI	TTATAA	2 cut(s)	1059, 1130
Psp1406I	AACGTT	3 cut(s)	1062, 1925, 2328
Psp5II	RGGWCCY	1 cut(s)	564
PspCI	CACGTG	1 cut(s)	892
PspEI	GGTNACC	1 cut(s)	1639
PspFI	CCCAGC	2 cut(s)	320, 1898
PspLI	CGTACG	1 cut(s)	9
PspN4I	GGNNCC	5 cut(s)	495, 566, 1152, 1183, 1484
PspPI	GGNCC	6 cut(s)	494, 564, 1246, 1483, 1737, 2297
PspPPI	RGGWCCY	1 cut(s)	564
PstNI	CAGNNNCTG	1 cut(s)	103
PvuII	CAGCTG	3 cut(s)	100, 617, 1549
SapI	GCTCTTC	1 cut(s)	912
SaqAI	TTAA	4 cut(s)	1350, 1835, 2097, 2138
Sau3AI	GATC	8 cut(s)	583, 604, 796, 856, 1411, 2119, 2203, 2361
Sau96I	GGNCC	6 cut(s)	494, 564, 1246, 1483, 1737, 2297
SchI	GAGTC	3 cut(s)	14, 170, 1222
ScrFI	CCNGG	2 cut(s)	2342, 2354
SfaNI	GCATC	2 cut(s)	928, 1123
SfcI	CTRYAG	1 cut(s)	540
SinI	GGWCC	4 cut(s)	564, 1246, 1483, 2297
SmlI	CTYRAG	3 cut(s)	1195, 1304, 1349
SmoI	CTYRAG	3 cut(s)	1195, 1304, 1349
SpeI	ACTAGT	1 cut(s)	389
SphI	GCATGC	1 cut(s)	1101
SspI	AATATT	1 cut(s)	1170
SspMI	CTAG	3 cut(s)	390, 432, 1494
StyD4I	CCNGG	2 cut(s)	2340, 2352
StyI	CCWWGG	4 cut(s)	27, 773, 1369, 2151
TaaI	ACNGT	4 cut(s)	121, 311, 1523, 1668
TaiI	ACGT	5 cut(s)	267, 894, 1065, 1928, 2331
TaqI	TCGA	3 cut(s)	1174, 1710, 1853
TatI	WGTACW	5 cut(s)	1308, 1443, 1518, 1560, 1806
TauI	GCSGC	7 cut(s)	35, 165, 168, 171, 184, 217, 228
TfiI	GAWTC	5 cut(s)	908, 1024, 1655, 1850, 1956
Tru1I	TTAA	4 cut(s)	1350, 1835, 2097, 2138
Tru9I	TTAA	4 cut(s)	1350, 1835, 2097, 2138
TscAI	CASTG	4 cut(s)	763, 961, 1528, 2273
TseFI	GTSAC	4 cut(s)	1049, 1588, 2022, 2262
TseI	GCWGC	9 cut(s)	100, 184, 334, 545, 614, 986, 1549, 1919, 2174
Tsp45I	GTSAC	4 cut(s)	1049, 1588, 2022, 2262
TspGWI	ACGGA	2 cut(s)	1868, 1968
TspRI	CASTG	4 cut(s)	763, 961, 1528, 2273
Van91I	CCANNNNNTGG	1 cut(s)	1889
Vha464I	CTTAAG	1 cut(s)	1349
VpaK11BI	GGWCC	4 cut(s)	564, 1246, 1483, 2297
XagI	CCTNNNNNAGG	1 cut(s)	1352
XapI	RAATTY	2 cut(s)	1874, 2348
XceI	RCATGY	5 cut(s)	79, 1101, 1676, 1753, 2255
XcmI	CCANNNNNNNNNTGG	1 cut(s)	575
XspI	CTAG	3 cut(s)	390, 432, 1494
Zsp2I	ATGCAT	1 cut(s)	1103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.