Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001592

Physical Location & Seq

Genomic Coordinates Forward (+)

6673584 .. 6683493

Gene Structure 9910 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g11200.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGGAGTCTTACGCGGTGCATTTGGCCATGGCGGCTCTGGTAGGGGCTTCGCTGGTCGCGGTCTCGGCTTACTATATGCACCGGAAAACCCTAACTCAGCTGCTGGAGTTCGCGAAGACGGTGGAGAGGGAGCGGGACGAGAACTCCGACGGCGGCGACGCCGACTCGCCGCAGCAGATGAGGAAGCGTAGGGGACAACGGCGCAAGGGCGGCGGTTATTACCGGCGCGGCTCGGGGTCGTTGCCGGACGTTACGGCGATTTCCGGCGGGGTTGACGGTAACGGAATGGTGGACGGTATTCCGGCTGGGTTGCCGAGGCTGCACACGCTTCCGGAAGGAAAATCTGCTGACCATGTGGGTTCAACTAAGAGGACTGCTATCCGAGCTGTTTCTCCAAAGTCTCCAGTTGCAAGTGCTAGTGCCTTTGAGAGTGTTGAAGGTTCAGATGATGAAGATAATTTGACTGACAATGCCAAAGTATATCATGCTAATGGCAATGCGGGGCCTGATTTACCAAACCATGTTACTACCAATGGAGAGCAAATTGCTATAGCTGCTTCAAGTATGATTAGGTCACATTCTGTATCTGGTGATCTGCATGGTGTCCAGCCTGATCCAATTGCAGCTGACATTCTAAGGAAAGAGCCTGAGCAAGAAACTTTTGCGCGACTTCAAATTACTCCCACTGAATTACCATCATCTGATGAAGTAGAGGTCTATGTGGTTCTTCAAGAATGTCTTGAACTGCGAAAGAGATATTTATTCAGTGAGGCAGTTGCTCCGTGGGAGAGAGAAGTTATATCTGATCCCAGTACCCCAAAGCCTAACCCAGAACCATTTTTCTACACTTCTGAGGGAAAGTCTGATCATCATTTTGAGATGCAAGATGGAGTAATTCACGTGTATCCAAATAAAGATTCAAAAGAAGAGCTTTATCCTGTTGCTGATGCAACTACCTTTTTCACTGACCTTCATCACATACTTCGAGTTATAGCAGCAGGGAATATAAGAACTTTATGCCATCATCGGTTGAATCTTCTGGAACAAAAATTCAATCTTCACTTAATGCTTAATGCGGATAAGGAATTTCTGGCCCAAAAAAGTGCCCCACATCGTGATTTTTATAATGTTAGGAAAGTTGATACCCATGTTCATCACTCGGCATGCATGAACCAGAAGCATCTTTTGAGGTTTATAAAGTCAAAGTTGAGGAAGGAGCCTGACGAGGTTGTAATATTTCGAGATGGAACCTATTTGACCTTAAGAGAAGTTTTTGAGAGTCTGGATTTGAATGGGTATGACCTGAATGTGGACCTTTTGGATGTTCATGCAGATAAAAGCACATTTCATCGTTTTGATAAGTTCAATCTGAAGTACAACCCCTGTGGTCAAAGTAGGCTCAGGGAGATTTTCCTTAAGCAGGATAATCTTATCCAAGGCCGTTTCCTTGCTGAGCTGACAAAGCAAGTGTTCTCTGATCTTTCTGCCAGTAAATATCAGATGGCTGAGTACAGAATATCAATATATGGCAGGAAGCAAAGTGAGTGGGACCAAATGGCTAGTTGGATAGTGAACAATGAATTGTACAGTGAGAATGTTGTATGGTTGATACAGCTGCCACGGCTGTACAATATATACAAGGAAATGGGGATAGTCACATCATTTCAGAATATTCTTGACAATATATTCATACCACTGTTTGAGGTTACCGTAGATCCAGATTCCCACCCGCAGTTGCATGTTTTTCTGAAACAGGTTGTTGGGTTGGATTTGGTTGATGATGAAAGCAAACCTGAAAGACGGCCCACAAAACACATGCCAACTCCAGCACAATGGACAAATGTTTTCAATCCTGCATTTTCATACTACGTGTACTATTGTTATGCTAATCTCTACACATTAAACAAGCTTCGCGAATCGAAGGGCATGACAACCATCAAATTCCGTCCACATTCTGGGGAGGCTGGGGACATTGACCACCTTGCTGCAACGTTTCTTACTGCAACTAACATTGCACACGGAATCAATTTGAGAAAGTCTCCTGTGCTTCAATATCTGTATTATCTAGCTCAGATTGGTCTGGCTATGTCACCCCTGAGTAACAATTCACTGTTCTTGGACTACCATCGCAACCCTTTTCCTGTATTTTTCTTACGGGGTCTTAACGTGTCTCTCTCTACTGATGATCCTCTTCAAATCCACTTAACGAAAGAACCCTTGGTAGAAGAATATAGTATAGCTGCTTCTGTATGGAAATTGAGTTCATGCGATCTATGTGAAATTGCCCGTAATTCAGTTTACCAGTCAGGTTTCTCACATGCGTTGAAGTCACACTGGATTGGGAGAGAGTACTACAAGAGAGGTCCAGATGGAAATGATATCCACAAAACAAATGTTCCCCATATCCGGGTGGAATTCCGTGAAACGATCTGGAGGGAGGAGATGAAACAAGTTTATCTTGGCAAGGCTAGAATCCCCAGAGAAGTTGACAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005829 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0010033 GO:0010154 GO:0016020 GO:0016021 GO:0019867 GO:0019899 GO:0019900 GO:0019901 GO:0022414 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032501 GO:0032502 GO:0032592 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043424 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0097305 GO:0098573 GO:0098588 GO:0098805 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130

Pfam Domains

Protein Families

A_deaminase

Protein Analysis

832

Amino Acids

94.57

Weight (kDa)

6.36

Isoelectric Point (pI)

43.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP_deaminase	PF19326	228 - 818	0.0	AMP deaminase
A_deaminase	PF00962	646 - 772	2.3e-09	Adenosine deaminase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001592)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38280 AT2G38280
fragaria_vesca	FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_4g35780 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200 FvH4_6g11200
malus_domestica	MD00G1061700.v1.1 MD12G1171800.v1.1 MD13G1080600.v1.1
prunus_persica	Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.1G265900_v2.0.a1 Prupe.6G280000_v2.0.a1
pyrus_communis	pycom04g14260 pycom13g06970
rosa_chinensis	RchiOBHm_Chr3g0462681 RchiOBHm_Chr4g0445291 RchiOBHm_Chr6g0271931
rosa_laevigata	RLG00000005751 RLG00000024843
rosa_multiflora	Rmu_sc0000050.1_g000023 Rmu_sc0011057.1_g000004
rosa_roxburghii	Rroxscaffold_5G00385800 Rroxscaffold_6G00417300
rosa_rugosa	Rorug03G0058500 Rorug04G0360200 Rorug04G0360300
rosa_samantha	Rh3AG116500 Rh3BG120100 Rh3CG123300 Rh3DG122100 Rh4AG421600 Rh4BG433500 Rh4CG448200 Rh4DG429500
rosa_wichuraiana	Rw3G009860 Rw4G036160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1125, 1196
AccB7I	CCANNNNNTGG	1 cut(s)	1955
AccBSI	CCGCTC	1 cut(s)	133
AccII	CGCG	6 cut(s)	14, 59, 113, 228, 667, 1914
AccIII	TCCGGA	1 cut(s)	331
AclI	AACGTT	1 cut(s)	1991
AclWI	GGATC	4 cut(s)	608, 800, 1709, 2180
AcoI	YGGCCR	1 cut(s)	24
AcsI	RAATTY	4 cut(s)	1049, 1085, 1940, 2414
AcuI	CTGAAG	1 cut(s)	1391
AcvI	CACGTG	1 cut(s)	901
AcyI	GRCGYC	1 cut(s)	159
AdeI	CACNNNGTG	1 cut(s)	1115
AfaI	GTAC	7 cut(s)	814, 1376, 1511, 1586, 1628, 1874, 2351
AfiI	CCNNNNNNNGG	5 cut(s)	1309, 1420, 1955, 2406, 2407
AflII	CTTAAG	2 cut(s)	1261, 1415
AflIII	ACRYGT	3 cut(s)	900, 1869, 2166
AjuI	GAANNNNNNNTTGG	4 cut(s)	901, 933, 2201, 2233
AloI	GAACNNNNNNTCC	2 cut(s)	2245, 2277
Alw26I	GTCTC	4 cut(s)	67, 405, 2043, 2175
AlwI	GGATC	4 cut(s)	608, 800, 1709, 2180
AlwNI	CAGNNNCTG	1 cut(s)	103
Ama87I	CYCGRG	1 cut(s)	232
Aor13HI	TCCGGA	1 cut(s)	331
AoxI	GGCC	5 cut(s)	24, 503, 1092, 1438, 1802
ApeKI	GCWGC	9 cut(s)	100, 172, 319, 554, 623, 995, 1615, 1985, 2240
ApoI	RAATTY	4 cut(s)	1049, 1085, 1940, 2414
AspLEI	GCGC	3 cut(s)	204, 228, 667
AspS9I	GGNCC	6 cut(s)	503, 1093, 1312, 1549, 1803, 2363
AsuC2I	CCSGG	1 cut(s)	2408
AsuHPI	GGTGA	2 cut(s)	602, 2082
AvaI	CYCGRG	1 cut(s)	232
AvaII	GGWCC	3 cut(s)	1312, 1549, 2363
BaeGI	GKGCMC	1 cut(s)	1108
BaeI	ACNNNNGTAYC	2 cut(s)	1134, 1167
BalI	TGGCCA	1 cut(s)	26
BarI	GAAGNNNNNNTAC	2 cut(s)	2227, 2259
BbrPI	CACGTG	1 cut(s)	901
BbsI	GAAGAC	1 cut(s)	122
BbvI	GCAGC	9 cut(s)	87, 184, 306, 541, 635, 1007, 1602, 1972, 2227
BccI	CCATC	8 cut(s)	703, 881, 1029, 1238, 1495, 1943, 2133, 2363
BceAI	ACGGC	6 cut(s)	166, 215, 270, 1425, 1637, 1817
BciVI	GTATCC	1 cut(s)	915
BclI	TGATCA	1 cut(s)	865
BcnI	CCSGG	1 cut(s)	2408
BcoDI	GTCTC	4 cut(s)	67, 405, 2043, 2175
BfaI	CTAG	4 cut(s)	417, 1560, 2066, 2469
BfmI	CTRYAG	1 cut(s)	549
BfrI	CTTAAG	2 cut(s)	1261, 1415
BfuI	GTATCC	1 cut(s)	915
BglI	GCCNNNNNGGC	1 cut(s)	32
BlpI	GCTNAGC	1 cut(s)	1452
BmcAI	AGTACT	1 cut(s)	2351
Bme1390I	CCNGG	1 cut(s)	2408
Bme18I	GGWCC	3 cut(s)	1312, 1549, 2363
BmeT110I	CYCGRG	1 cut(s)	232
BmgT120I	GGNCC	6 cut(s)	503, 1093, 1312, 1549, 1803, 2363
BmiI	GGNNCC	4 cut(s)	504, 1218, 1249, 1550
BmrFI	CCNGG	1 cut(s)	2408
BmrI	ACTGGG	1 cut(s)	804
BmsI	GCATC	3 cut(s)	870, 937, 1189
BmuI	ACTGGG	1 cut(s)	804
BpiI	GAAGAC	1 cut(s)	122
BplI	GAGNNNNNCTC	2 cut(s)	2023, 2055
BpmI	CTGGAG	4 cut(s)	125, 387, 1809, 2452
Bpu10I	CCTNAGC	2 cut(s)	648, 1400
Bpu1102I	GCTNAGC	1 cut(s)	1452
BpuMI	CCSGG	1 cut(s)	2408
BsaAI	YACGTR	2 cut(s)	901, 1870
BsaHI	GRCGYC	1 cut(s)	159
BsaI	GGTCTC	1 cut(s)	67
BsaJI	CCNNGG	6 cut(s)	27, 314, 782, 1435, 1619, 2217
BsaWI	WCCGGW	2 cut(s)	81, 331
BsaXI	ACNNNNNCTCC	2 cut(s)	128, 158
Bsc4I	CCNNNNNNNGG	5 cut(s)	1309, 1420, 1955, 2406, 2407
Bse118I	RCCGGY	1 cut(s)	222
Bse1I	ACTGG	5 cut(s)	404, 810, 1488, 2302, 2339
Bse3DI	GCAATG	2 cut(s)	502, 2010
BseAI	TCCGGA	1 cut(s)	331
BseDI	CCNNGG	6 cut(s)	27, 314, 782, 1435, 1619, 2217
BseGI	GGATG	1 cut(s)	1327
BseLI	CCNNNNNNNGG	5 cut(s)	1309, 1420, 1955, 2406, 2407
BseMI	GCAATG	2 cut(s)	502, 2010
BseMII	CTCAG	8 cut(s)	110, 639, 843, 1414, 1443, 1497, 2084, 2087
BseNI	ACTGG	5 cut(s)	404, 810, 1488, 2302, 2339
BseRI	GAGGAG	1 cut(s)	2453
BseSI	GKGCMC	1 cut(s)	1108
BseXI	GCAGC	9 cut(s)	87, 184, 306, 541, 635, 1007, 1602, 1972, 2227
BseYI	CCCAGC	2 cut(s)	305, 1964
BsgI	GTGCAG	1 cut(s)	305
Bsh1236I	CGCG	6 cut(s)	14, 59, 113, 228, 667, 1914
BshFI	GGCC	5 cut(s)	26, 505, 1094, 1440, 1804
BsiHKCI	CYCGRG	1 cut(s)	232
BsiSI	CCGG	7 cut(s)	82, 223, 245, 264, 302, 332, 2407
BslFI	GGGAC	4 cut(s)	149, 207, 1562, 1982
BslI	CCNNNNNNNGG	5 cut(s)	1309, 1420, 1955, 2406, 2407
BsmAI	GTCTC	4 cut(s)	67, 405, 2043, 2175
BsmFI	GGGAC	4 cut(s)	149, 207, 1562, 1982
BsnI	GGCC	5 cut(s)	26, 505, 1094, 1440, 1804
Bso31I	GGTCTC	1 cut(s)	67
BsoBI	CYCGRG	1 cut(s)	232
Bsp1286I	GDGCHC	1 cut(s)	1108
Bsp13I	TCCGGA	1 cut(s)	331
Bsp1407I	TGTACA	2 cut(s)	1584, 1626
Bsp143I	GATC	9 cut(s)	592, 613, 805, 865, 1477, 1714, 2185, 2269, 2427
Bsp1720I	GCTNAGC	1 cut(s)	1452
Bsp19I	CCATGG	1 cut(s)	27
Bsp68I	TCGCGA	2 cut(s)	113, 1914
BspANI	GGCC	5 cut(s)	26, 505, 1094, 1440, 1804
BspCNI	CTCAG	8 cut(s)	109, 640, 844, 1413, 1444, 1498, 2083, 2088
BspEI	TCCGGA	1 cut(s)	331
BspFNI	CGCG	6 cut(s)	14, 59, 113, 228, 667, 1914
BspLI	GGNNCC	4 cut(s)	504, 1218, 1249, 1550
BspPI	GGATC	4 cut(s)	608, 800, 1709, 2180
BspQI	GCTCTTC	1 cut(s)	921
BspTI	CTTAAG	2 cut(s)	1261, 1415
BspTNI	GGTCTC	1 cut(s)	67
BsrBI	CCGCTC	1 cut(s)	133
BsrDI	GCAATG	2 cut(s)	502, 2010
BsrFI	RCCGGY	1 cut(s)	222
BsrGI	TGTACA	2 cut(s)	1584, 1626
BsrI	ACTGG	5 cut(s)	404, 810, 1488, 2302, 2339
BssAI	RCCGGY	1 cut(s)	222
BssECI	CCNNGG	6 cut(s)	27, 314, 782, 1435, 1619, 2217
BssMI	GATC	9 cut(s)	592, 613, 805, 865, 1477, 1714, 2185, 2269, 2427
BssNI	GRCGYC	1 cut(s)	159
BssT1I	CCWWGG	3 cut(s)	27, 1435, 2217
Bst4CI	ACNGT	7 cut(s)	121, 278, 296, 1589, 1698, 1711, 2112
Bst6I	CTCTTC	2 cut(s)	921, 2196
BstACI	GRCGYC	1 cut(s)	159
BstAFI	CTTAAG	2 cut(s)	1261, 1415
BstAUI	TGTACA	2 cut(s)	1584, 1626
BstBAI	YACGTR	2 cut(s)	901, 1870
BstC8I	GCNNGC	1 cut(s)	1165
BstDSI	CCRYGG	3 cut(s)	27, 782, 1619
BstEII	GGTNACC	1 cut(s)	1705
BstENI	CCTNNNNNAGG	1 cut(s)	1418
BstF5I	GGATG	1 cut(s)	1327
BstFNI	CGCG	6 cut(s)	14, 59, 113, 228, 667, 1914
BstHHI	GCGC	3 cut(s)	204, 228, 667
BstKTI	GATC	9 cut(s)	595, 616, 808, 868, 1480, 1717, 2188, 2272, 2430
BstMAI	GTCTC	4 cut(s)	67, 405, 2043, 2175
BstMBI	GATC	9 cut(s)	592, 613, 805, 865, 1477, 1714, 2185, 2269, 2427
BstMWI	GCNNNNNNNGC	9 cut(s)	32, 65, 210, 319, 325, 383, 554, 1462, 1621
BstNSI	RCATGY	4 cut(s)	1167, 1742, 1819, 2321
BstPI	GGTNACC	1 cut(s)	1705
BstSCI	CCNGG	1 cut(s)	2406
BstSFI	CTRYAG	1 cut(s)	549
BstSLI	GKGCMC	1 cut(s)	1108
BstUI	CGCG	6 cut(s)	14, 59, 113, 228, 667, 1914
BstV1I	GCAGC	9 cut(s)	87, 184, 306, 541, 635, 1007, 1602, 1972, 2227
BstV2I	GAAGAC	1 cut(s)	122
BstX2I	RGATCY	1 cut(s)	1714
BstXI	CCANNNNNNTGG	1 cut(s)	1833
BstYI	RGATCY	1 cut(s)	1714
BsuI	GTATCC	1 cut(s)	915
BsuRI	GGCC	5 cut(s)	26, 505, 1094, 1440, 1804
BtgI	CCRYGG	3 cut(s)	27, 782, 1619
BtgZI	GCGATG	1 cut(s)	2111
BtsCI	GGATG	1 cut(s)	1327
BtsIMutI	CAGTG	7 cut(s)	684, 772, 963, 1594, 1694, 2108, 2332
BtuMI	TCGCGA	2 cut(s)	113, 1914
Cac8I	GCNNGC	1 cut(s)	1165
CaiI	CAGNNNCTG	1 cut(s)	103
CfoI	GCGC	3 cut(s)	204, 228, 667
Cfr10I	RCCGGY	1 cut(s)	222
Cfr13I	GGNCC	6 cut(s)	503, 1093, 1312, 1549, 1803, 2363
CseI	GACGC	1 cut(s)	167
Csp6I	GTAC	7 cut(s)	813, 1375, 1510, 1585, 1627, 1873, 2350
CspCI	CAANNNNNGTGG	4 cut(s)	1366, 1401, 1526, 1561
CviQI	GTAC	7 cut(s)	813, 1375, 1510, 1585, 1627, 1873, 2350
DpnI	GATC	9 cut(s)	594, 615, 807, 867, 1479, 1716, 2187, 2271, 2429
DpnII	GATC	9 cut(s)	592, 613, 805, 865, 1477, 1714, 2185, 2269, 2427
DraIII	CACNNNGTG	1 cut(s)	1115
EaeI	YGGCCR	1 cut(s)	24
Eam1104I	CTCTTC	2 cut(s)	921, 2196
EarI	CTCTTC	2 cut(s)	921, 2196
Eco130I	CCWWGG	3 cut(s)	27, 1435, 2217
Eco31I	GGTCTC	1 cut(s)	67
Eco32I	GATATC	1 cut(s)	2380
Eco47I	GGWCC	3 cut(s)	1312, 1549, 2363
Eco57I	CTGAAG	1 cut(s)	1391
Eco72I	CACGTG	1 cut(s)	901
Eco88I	CYCGRG	1 cut(s)	232
Eco91I	GGTNACC	1 cut(s)	1705
EcoNI	CCTNNNNNAGG	1 cut(s)	1418
EcoO109I	RGGNCCY	1 cut(s)	503
EcoO65I	GGTNACC	1 cut(s)	1705
EcoRI	GAATTC	1 cut(s)	2414
EcoRV	GATATC	1 cut(s)	2380
EcoT14I	CCWWGG	3 cut(s)	27, 1435, 2217
EcoT22I	ATGCAT	1 cut(s)	1169
ErhI	CCWWGG	3 cut(s)	27, 1435, 2217
FalI	AAGNNNNNCTT	6 cut(s)	723, 755, 915, 947, 2442, 2474
FaqI	GGGAC	4 cut(s)	149, 207, 1562, 1982
FauI	CCCGC	4 cut(s)	126, 260, 493, 1737
FbaI	TGATCA	1 cut(s)	865
FokI	GGATG	1 cut(s)	1334
FspBI	CTAG	4 cut(s)	417, 1560, 2066, 2469
GlaI	GCGC	3 cut(s)	203, 227, 666
GsaI	CCCAGC	2 cut(s)	309, 1968
GsuI	CTGGAG	4 cut(s)	125, 387, 1809, 2452
HaeIII	GGCC	5 cut(s)	26, 505, 1094, 1440, 1804
HapII	CCGG	7 cut(s)	82, 223, 245, 264, 302, 332, 2407
HgaI	GACGC	1 cut(s)	167
HhaI	GCGC	3 cut(s)	204, 228, 667
Hin1I	GRCGYC	1 cut(s)	159
Hin6I	GCGC	3 cut(s)	202, 226, 665
HinP1I	GCGC	3 cut(s)	202, 226, 665
HincII	GTYRAC	2 cut(s)	274, 2488
HindII	GTYRAC	2 cut(s)	274, 2488
HindIII	AAGCTT	1 cut(s)	1907
HinfI	GANTC	9 cut(s)	5, 164, 917, 1033, 1279, 1721, 1916, 2022, 2472
HpaII	CCGG	7 cut(s)	82, 223, 245, 264, 302, 332, 2407
HphI	GGTGA	2 cut(s)	602, 2082
Hpy166II	GTNNAC	8 cut(s)	274, 292, 1312, 1573, 1873, 1949, 2299, 2488
Hpy8I	GTNNAC	8 cut(s)	274, 292, 1312, 1573, 1873, 1949, 2299, 2488
Hpy99I	CGWCG	2 cut(s)	152, 161
HpyAV	CCTTC	5 cut(s)	329, 431, 980, 1207, 1915
HpyCH4III	ACNGT	7 cut(s)	121, 278, 296, 1589, 1698, 1711, 2112
HpyCH4IV	ACGT	5 cut(s)	249, 900, 1869, 1991, 2166
HpyF10VI	GCNNNNNNNGC	9 cut(s)	32, 65, 210, 319, 325, 383, 554, 1462, 1621
HpySE526I	ACGT	5 cut(s)	249, 900, 1869, 1991, 2166
Hsp92I	GRCGYC	1 cut(s)	159
HspAI	GCGC	3 cut(s)	202, 226, 665
Kpn2I	TCCGGA	1 cut(s)	331
Ksp22I	TGATCA	1 cut(s)	865
Kzo9I	GATC	9 cut(s)	592, 613, 805, 865, 1477, 1714, 2185, 2269, 2427
LguI	GCTCTTC	1 cut(s)	921
LmnI	GCTCC	3 cut(s)	130, 784, 1216
Lsp1109I	GCAGC	9 cut(s)	87, 184, 306, 541, 635, 1007, 1602, 1972, 2227
LweI	GCATC	3 cut(s)	870, 937, 1189
MaeI	CTAG	4 cut(s)	417, 1560, 2066, 2469
MaeII	ACGT	5 cut(s)	249, 900, 1869, 1991, 2166
MaeIII	GTNAC	9 cut(s)	250, 278, 523, 573, 1654, 1705, 2088, 2099, 2328
MalI	GATC	9 cut(s)	594, 615, 807, 867, 1479, 1716, 2187, 2271, 2429
MbiI	CCGCTC	1 cut(s)	133
MboI	GATC	9 cut(s)	592, 613, 805, 865, 1477, 1714, 2185, 2269, 2427
MboII	GAAGA	8 cut(s)	127, 464, 719, 938, 1028, 1049, 2183, 2237
MfeI	CAATTG	1 cut(s)	618
MflI	RGATCY	1 cut(s)	1714
MhlI	GDGCHC	1 cut(s)	1108
MlsI	TGGCCA	1 cut(s)	26
MluNI	TGGCCA	1 cut(s)	26
MlyI	GAGTC	3 cut(s)	14, 158, 1288
MmeI	TCCRAC	3 cut(s)	171, 1544, 1746
Mox20I	TGGCCA	1 cut(s)	26
Mph1103I	ATGCAT	1 cut(s)	1169
MroI	TCCGGA	1 cut(s)	331
MscI	TGGCCA	1 cut(s)	26
MseI	TTAA	7 cut(s)	1064, 1071, 1262, 1416, 1901, 2163, 2204
MslI	CAYNNNNRTG	1 cut(s)	489
Msp20I	TGGCCA	1 cut(s)	26
MspA1I	CMGCKG	3 cut(s)	100, 626, 1615
MspCI	CTTAAG	2 cut(s)	1261, 1415
MspI	CCGG	7 cut(s)	82, 223, 245, 264, 302, 332, 2407
MspR9I	CCNGG	1 cut(s)	2408
MunI	CAATTG	1 cut(s)	618
MvnI	CGCG	6 cut(s)	14, 59, 113, 228, 667, 1914
MwoI	GCNNNNNNNGC	9 cut(s)	32, 65, 210, 319, 325, 383, 554, 1462, 1621
NciI	CCSGG	1 cut(s)	2408
NcoI	CCATGG	1 cut(s)	27
NdeII	GATC	9 cut(s)	592, 613, 805, 865, 1477, 1714, 2185, 2269, 2427
NlaIV	GGNNCC	4 cut(s)	504, 1218, 1249, 1550
NmeAIII	GCCGAG	3 cut(s)	44, 339, 1139
NmuCI	GTSAC	4 cut(s)	573, 1654, 2088, 2328
NruI	TCGCGA	2 cut(s)	113, 1914
NsiI	ATGCAT	1 cut(s)	1169
NspI	RCATGY	4 cut(s)	1167, 1742, 1819, 2321
PaeI	GCATGC	1 cut(s)	1167
PciSI	GCTCTTC	1 cut(s)	921
PcsI	WCGNNNNNNNCGW	1 cut(s)	144
PfeI	GAWTC	6 cut(s)	917, 1033, 1721, 1916, 2022, 2472
PflMI	CCANNNNNTGG	1 cut(s)	1955
PleI	GAGTC	3 cut(s)	13, 158, 1287
PmaCI	CACGTG	1 cut(s)	901
PmlI	CACGTG	1 cut(s)	901
PpsI	GAGTC	3 cut(s)	13, 158, 1287
Ppu21I	YACGTR	2 cut(s)	901, 1870
PsiI	TTATAA	2 cut(s)	1125, 1196
Psp1406I	AACGTT	1 cut(s)	1991
PspCI	CACGTG	1 cut(s)	901
PspEI	GGTNACC	1 cut(s)	1705
PspFI	CCCAGC	2 cut(s)	305, 1964
PspN4I	GGNNCC	4 cut(s)	504, 1218, 1249, 1550
PspPI	GGNCC	6 cut(s)	503, 1093, 1312, 1549, 1803, 2363
PstNI	CAGNNNCTG	1 cut(s)	103
PsuI	RGATCY	1 cut(s)	1714
PvuII	CAGCTG	3 cut(s)	100, 626, 1615
RruI	TCGCGA	2 cut(s)	113, 1914
RsaI	GTAC	7 cut(s)	814, 1376, 1511, 1586, 1628, 1874, 2351
RsaNI	GTAC	7 cut(s)	813, 1375, 1510, 1585, 1627, 1873, 2350
RseI	CAYNNNNRTG	1 cut(s)	489
SapI	GCTCTTC	1 cut(s)	921
SaqAI	TTAA	7 cut(s)	1064, 1071, 1262, 1416, 1901, 2163, 2204
Sau3AI	GATC	9 cut(s)	592, 613, 805, 865, 1477, 1714, 2185, 2269, 2427
Sau96I	GGNCC	6 cut(s)	503, 1093, 1312, 1549, 1803, 2363
ScaI	AGTACT	1 cut(s)	2351
SchI	GAGTC	3 cut(s)	14, 158, 1288
ScrFI	CCNGG	1 cut(s)	2408
SduI	GDGCHC	1 cut(s)	1108
SfaNI	GCATC	3 cut(s)	870, 937, 1189
SfcI	CTRYAG	1 cut(s)	549
SinI	GGWCC	3 cut(s)	1312, 1549, 2363
SmiMI	CAYNNNNRTG	1 cut(s)	489
SmlI	CTYRAG	2 cut(s)	1261, 1415
SmoI	CTYRAG	2 cut(s)	1261, 1415
SphI	GCATGC	1 cut(s)	1167
SspI	AATATT	2 cut(s)	1236, 1672
SspMI	CTAG	4 cut(s)	417, 1560, 2066, 2469
StyD4I	CCNGG	1 cut(s)	2406
StyI	CCWWGG	3 cut(s)	27, 1435, 2217
TaaI	ACNGT	7 cut(s)	121, 278, 296, 1589, 1698, 1711, 2112
TaiI	ACGT	5 cut(s)	252, 903, 1872, 1994, 2169
TaqI	TCGA	3 cut(s)	985, 1240, 1919
TatI	WGTACW	6 cut(s)	1374, 1509, 1584, 1626, 1872, 2349
TauI	GCSGC	5 cut(s)	35, 156, 172, 213, 231
TfiI	GAWTC	6 cut(s)	917, 1033, 1721, 1916, 2022, 2472
Tru1I	TTAA	7 cut(s)	1064, 1071, 1262, 1416, 1901, 2163, 2204
Tru9I	TTAA	7 cut(s)	1064, 1071, 1262, 1416, 1901, 2163, 2204
TscAI	CASTG	7 cut(s)	691, 772, 970, 1594, 1701, 2115, 2339
TseFI	GTSAC	4 cut(s)	573, 1654, 2088, 2328
TseI	GCWGC	9 cut(s)	100, 172, 319, 554, 623, 995, 1615, 1985, 2240
Tsp45I	GTSAC	4 cut(s)	573, 1654, 2088, 2328
TspGWI	ACGGA	5 cut(s)	297, 771, 1934, 2034, 2408
TspRI	CASTG	7 cut(s)	691, 772, 970, 1594, 1701, 2115, 2339
Van91I	CCANNNNNTGG	1 cut(s)	1955
Vha464I	CTTAAG	2 cut(s)	1261, 1415
VpaK11BI	GGWCC	3 cut(s)	1312, 1549, 2363
XagI	CCTNNNNNAGG	1 cut(s)	1418
XapI	RAATTY	4 cut(s)	1049, 1085, 1940, 2414
XceI	RCATGY	4 cut(s)	1167, 1742, 1819, 2321
XcmI	CCANNNNNNNNNTGG	1 cut(s)	34
XspI	CTAG	4 cut(s)	417, 1560, 2066, 2469
ZrmI	AGTACT	1 cut(s)	2351
Zsp2I	ATGCAT	1 cut(s)	1169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.