FvH4_5g15261

ABC transporter A family member

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
8629520 .. 8636826
7307 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g15261.t1

Sequence Viewer

Length: 3405 bp
ATGGCGGATTTTGTTGGTAGCCAAGCTAATTTCTGGGTCCAATCCAATGCTTTGCTCAGAAAGAACTTAACCTTTCAGAAACGAAGACTGTGCGCCAACATTACAATCATTCTAATACCAGCTTTCTTCTGCACTTTATGTGCCCTTATCCAATATGGAACAGAGACCTATTATGTGAAAAAGAGCGTTGATTATTGCAAGAAAGGGCCATCGCCATATGAAATTACATCAACTTTTCCCCTACAGTGTCCAATCCCTTCTCCTATAGAATGGCCTCCCTTGTTACAAGTACCACAACCTTATGCTCGTGCTGTCCGAAGTGATATCTTTCCCTGGACGGACTTGCCCGATGAGTCATGCATGAAGAACGAAAACTTTGGCTGTCCTGTCACCACGCTCATCACCGGGAATAACCAGACATTAGCACAAGGATTGGGTGATAACATGTTCCCGGCTGGTGGTTTCCCTAAAAATTCCACCAACAGCATTACCGATTGGGCAGAAGTTGTCATGGGTACCACTTCAAGAGTCGATGACAAAACAAGCCTTCATCGAGATTTTGCTATCACTGACGATATTGTTGCACAAGACCAGCTCTATATTCTGCAGGAACAATGTGATAATAATGAAGACTCTAATATAAATAGAAATAGCACAAAACTACAAGTAGCATCAAAGCTCACATTTGAAACAGATATTGAATGTCTCCCATATCTAATATTGTGGCGTAATAGTTCTTCTGAAATAAACGATGAACTGTTCAAAGGTGACGCCGGGGGGAATAAAAAGAACAAAGCTAATGGAATACTTACAGCGTTAGATATCTCAAACTCGGATGAAAATTCTTTTAATGTGAACATATGGTACAATTCAACAGTAAGCAATAGGGATTTCTTGCAATCAATAACCACCAATCCGGAAGTGATCAAACGAGTTCCACGCTTGGTTAATATGGTATCAAACGCGTACCTTCAGTTTCTTACAGGAGCTAAGACGATTCGGTTCGACTTTGTTAAAGAAATGCCCAAGGGTTTTACCTCAGACATTCCCGATTTGGGGGCATTTATCGGTCCAGTGTTGTTTACATGGGTTGTTTTACAGTTGTTCCCGGTAGTGTTAGCGAATCTGGTTTATGAGAAACAAGAAAGACTGAGAGTGATGATGAAGATGCATGGCCTTGGGTTAAGCTTCTTCTACAGACATGACTACTCCCTCCAATTTATCTTTTACTTCTTTGTTATAAACTTGCAAATAGCGCTGGCTTTTCTTCTGTCGTCAATGTTCTCGCACACTAGGAGTGCTACAGTTGTAGCTTACGTTTACGTTTTCGGAAGCGGGCTTCTGGGAAGCTTTTTCTTCCAGGATCTACTCATGGATGTTCACATGCCTAAAGGGTGGATCATTTTTCTAGAGTTGTATCCTGGCTTCTCTCTCTACAGAGGCTTATTCGAGTTTATGCAATATGCCACCGATGGGAAAATCATGAAGACTAGTGGTATGCGTTGGGGGAATTTGAATGATAGCGTAAATGGTATGAAAGATGTCCTGGCCATCATGGCAATAGAGTGGGCTGTGCTGCTGCTTCTTGCATTTTACATAGATCAAGTTGTAACTTGGGGAAAATCTCCTTTATTCTTCTTGCGAAGAAAGAAAGCACCGGCTCTCCAAATCCCTAGTATGGAGAGGCTTGGATCTAAAGGGTATGGTGACATGGAGAAACCTGATGTCGCTCAGGAGGCAATACTAACTGGTTGCTTGCTGTATTTCCTTCAGAAGGAAAAGGTTGACAAGCTGTTGGAAGAAGCAAAATATACAAGTCATGTTGTGATATGTGACAACATAAAGAAGGTGTATCCAGGAAGAGATGGAAACCCTGAGAAATTTGCAGTGAGAGGGTTGTCTCTTGCTTTGCCTCAAGGCGAATGCTTTGGTATGCTTGGTCCTAGTGGTGCAGGAAAGACCTCTTTTATTGAAATGATGATTGGTCTGATAAAGCCAACCACTGGCACAGCCTATGTTCAGGGGTTGGACCTTGTAACTCAGATGAATGAAATATATGCCTGCATTGGTGTTTGTCCACAACACGACCTACTATGGGCAACCCTAACAGGAAGAGAGCATCTACTATTTTATGGGAGACTTAAGAACCTTAAAGGTTCCGACTTAACCAAAGCAGTGGAAGATTCTTTGAAGAATCTGAATCTATTTAACGGCGGGGTTTCTGACAAACGAGCAGGGCAATACAGTGGAGGTATGAAGAGAAGGCTTAGCGTCGCCATTTCACTCATAGGGAATCCCATATGTTTGTTGCTAACTAGTTCACCTAAGATGAATAATAAGATATCTTTGTATTGGTGTTTTCTTTTCCTGCTGCCTTTGATCTTGAATTTTTCTGAGGCAAATGATGAAAAGGTGGGAGATATTTATGAATTGAAGAAGGGAAATATCTCTGTGAAGCTGACAAATTATGGTGCAACTGTGCTCTCTGTTGTTCTCCCTGATAAGAATGGGAAATTAGATGACGTTGTTCTTGGGTTCGAAGCCCTCAAAGATTACACTAATGATTCTGTCTACTTTGGGGCCACCGTTGGGCGTGTTGCTAACAGAATTGGTAGAGCTGAATTCACTTTGAATGGAAACCACTATAAGTTGGTTGCTAATGATCATGGAAAGAACACTCTCCATGGTGGCTCTAAAGGGTTCAGTGATGTTCTATGGACAGTGAAGCGTCACATTGAAGACAGTCACATAACATTCACCTATGATAGTCGGGATGGTGAAGAAGGCTTCCCTGGTGATCTTTCAGTCTCAGTAACATACATGTTTGTTGGACATGACGTACTAGCTATTAAAATGGAAGCCAAAGCTCTCACCAAGGTCACACCAGTAAACCTAGCCCACCACACGTACTGGAATCTCCGCGGCCACAACAGCGGTGACATCCTCTCACACAAAATCCACATTTTCGGTTCCAACATCACTCCAGTCAATGATGAACTCATCCCCACTGGTGACATTGCCCCGGTTAAAGGAACGGCATATGATTTCCTTGAGCCCCGAGAGATTGGTAGCAGGATCAATGAGCTGCCTGATGGTTATGACATCAACTACATAATGGACCCTTCCAGCCCTGACCACTTGAGGAAGGCTGCAGTGCTGCATGACAGTGTTTCGGGGCGAAAAATGGAGCTGTGGACTAACCAGCCAGGGCTGCAATTCTACACTAGTAACATGCTAAATGATGTGAAAGGGAAAGGTGGATTTGTGTATAAAAAGTATGCCGCAGTGTGCTTGGAGACGCAGGGTTTCCCAGATTCCGTGAATCATCCAAATTTCCCTTCACAAATTTTGAATCCAGGAGACACTTATATGCATTCTATGGTCTATAGGTTCACAGCTAACTAG

Protein Analysis

1135

Amino Acids

126.95

Weight (kDa)

6.56

Isoelectric Point (pI)

41.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 631 - 771 6.5e-20 ABC transporter
Aldose_epim PF01263 808 - 1130 7.5e-93 Aldose 1-epimerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1241
Acc65I GGTACC 1 cut(s) 515
AccB1I GGYRCC 1 cut(s) 515
AccB7I CCANNNNNTGG 1 cut(s) 2003
AccI GTMKAC 1 cut(s) 2571
AccII CGCG 2 cut(s) 965, 2922
AccIII TCCGGA 1 cut(s) 916
AciI CCGC 7 cut(s) 5, 1335, 2214, 2920, 2922, 2934, 3282
AclWI GGATC 4 cut(s) 1371, 1406, 1699, 3083
AcoI YGGCCR 2 cut(s) 1548, 2923
AcsI RAATTY 8 cut(s) 472, 841, 1510, 1880, 2386, 2621, 3331, 3345
AcuI CTGAAG 2 cut(s) 956, 1754
AcyI GRCGYC 1 cut(s) 771
AfaI GTAC 6 cut(s) 291, 517, 866, 968, 2841, 2909
AfeI AGCGCT 1 cut(s) 1257
AflII CTTAAG 1 cut(s) 2141
AflIII ACRYGT 4 cut(s) 444, 963, 2820, 2904
AhlI ACTAGT 3 cut(s) 1490, 2315, 3224
AjnI CCWGG 8 cut(s) 332, 1359, 1420, 1545, 1855, 2791, 3205, 3355
AjuI GAANNNNNNNTTGG 4 cut(s) 1965, 1997, 3322, 3354
Alw21I GWGCWC 1 cut(s) 2484
Alw26I GTCTC 7 cut(s) 158, 710, 1905, 2131, 2812, 3290, 3354
AlwI GGATC 4 cut(s) 1371, 1406, 1699, 3083
Ama87I CYCGRG 1 cut(s) 3057
Aor13HI TCCGGA 1 cut(s) 916
Aor51HI AGCGCT 1 cut(s) 1257
AoxI GGCC 6 cut(s) 206, 272, 1174, 1548, 2580, 2923
ApeKI GCWGC 7 cut(s) 1576, 1579, 2371, 3085, 3149, 3157, 3211
ApoI RAATTY 8 cut(s) 472, 841, 1510, 1880, 2386, 2621, 3331, 3345
Asp718I GGTACC 1 cut(s) 515
AspLEI GCGC 2 cut(s) 95, 1258
AspS9I GGNCC 7 cut(s) 37, 206, 1070, 1940, 2029, 2580, 3118
AsuC2I CCSGG 5 cut(s) 406, 452, 775, 1109, 3023
AsuII TTCGAA 1 cut(s) 2538
AvaI CYCGRG 1 cut(s) 3057
AvaII GGWCC 5 cut(s) 37, 1070, 1940, 2029, 3118
BaeGI GKGCMC 1 cut(s) 145
BalI TGGCCA 1 cut(s) 1550
BanI GGYRCC 1 cut(s) 515
BanII GRGCYC 1 cut(s) 3057
BarI GAAGNNNNNNTAC 4 cut(s) 721, 753, 1409, 1441
BauI CACGAG 1 cut(s) 306
BbsI GAAGAC 4 cut(s) 91, 636, 1493, 2745
Bbv12I GWGCWC 1 cut(s) 2484
BbvI GCAGC 7 cut(s) 1563, 1566, 2358, 3072, 3136, 3144, 3198
BccI CCATC 6 cut(s) 217, 1466, 1559, 1859, 2768, 3086
BceAI ACGGC 2 cut(s) 2227, 3051
BcgI CGANNNNNNTGC 4 cut(s) 72, 106, 563, 597
BciT130I CCWGG 8 cut(s) 334, 1361, 1422, 1547, 1857, 2793, 3207, 3357
BciVI GTATCC 2 cut(s) 1428, 1863
BclI TGATCA 2 cut(s) 924, 2662
BcnI CCSGG 5 cut(s) 406, 452, 775, 1109, 3023
BcoDI GTCTC 7 cut(s) 158, 710, 1905, 2131, 2812, 3290, 3354
BcuI ACTAGT 3 cut(s) 1490, 2315, 3224
BfmI CTRYAG 8 cut(s) 242, 264, 605, 1195, 1302, 1435, 3150, 3385
BfoI RGCGCY 1 cut(s) 1259
BfrI CTTAAG 1 cut(s) 2141
BfuI GTATCC 2 cut(s) 1428, 1863
BglI GCCNNNNNGGC 1 cut(s) 1556
BisI GCNGC 9 cut(s) 1577, 1580, 2372, 2923, 3086, 3150, 3158, 3212, 3282
BlpI GCTNAGC 1 cut(s) 2267
BlsI GCNGC 9 cut(s) 1578, 1581, 2373, 2924, 3087, 3151, 3159, 3213, 3283
Bme18I GGWCC 5 cut(s) 37, 1070, 1940, 2029, 3118
BmeT110I CYCGRG 1 cut(s) 3057
BmgT120I GGNCC 7 cut(s) 37, 206, 1070, 1940, 2029, 2580, 3118
BmiI GGNNCC 6 cut(s) 38, 517, 2158, 2581, 2971, 3120
BmsI GCATC 3 cut(s) 680, 1158, 2128
BpiI GAAGAC 4 cut(s) 91, 636, 1493, 2745
BpmI CTGGAG 1 cut(s) 2967
Bpu10I CCTNAGC 1 cut(s) 1731
Bpu1102I GCTNAGC 1 cut(s) 2267
Bpu14I TTCGAA 1 cut(s) 2538
BpuEI CTTGAG 3 cut(s) 1899, 3071, 3160
BpuMI CCSGG 5 cut(s) 406, 452, 775, 1109, 3023
BsaAI YACGTR 1 cut(s) 2907
BsaHI GRCGYC 1 cut(s) 771
BsaI GGTCTC 1 cut(s) 158
BsaWI WCCGGW 1 cut(s) 916
BsaXI ACNNNNNCTCC 2 cut(s) 1647, 1677
Bse118I RCCGGY 1 cut(s) 1657
Bse1I ACTGG 7 cut(s) 1073, 1753, 2008, 2885, 2915, 2984, 3013
Bse3DI GCAATG 1 cut(s) 3015
BseAI TCCGGA 1 cut(s) 916
BseBI CCWGG 8 cut(s) 334, 1361, 1422, 1547, 1857, 2793, 3207, 3357
BseGI GGATG 6 cut(s) 841, 1381, 2779, 2940, 3000, 3325
BseMI GCAATG 1 cut(s) 3015
BseMII CTCAG 8 cut(s) 70, 1053, 1142, 1745, 1866, 2054, 2385, 2823
BseNI ACTGG 7 cut(s) 1073, 1753, 2008, 2885, 2915, 2984, 3013
BseSI GKGCMC 1 cut(s) 145
BseXI GCAGC 7 cut(s) 1563, 1566, 2358, 3072, 3136, 3144, 3198
BsgI GTGCAG 2 cut(s) 115, 1971
Bsh1236I CGCG 2 cut(s) 965, 2922
BshFI GGCC 6 cut(s) 208, 274, 1176, 1550, 2582, 2925
BshNI GGYRCC 1 cut(s) 515
BsiHKAI GWGCWC 1 cut(s) 2484
BsiHKCI CYCGRG 1 cut(s) 3057
BsiSI CCGG 7 cut(s) 405, 452, 774, 917, 1109, 1658, 3023
BsmAI GTCTC 7 cut(s) 158, 710, 1905, 2131, 2812, 3290, 3354
BsmBI CGTCTC 1 cut(s) 3290
BsmI GAATGC 2 cut(s) 1928, 3373
BsnI GGCC 6 cut(s) 208, 274, 1176, 1550, 2582, 2925
Bso31I GGTCTC 1 cut(s) 158
BsoBI CYCGRG 1 cut(s) 3057
Bsp119I TTCGAA 1 cut(s) 2538
Bsp1286I GDGCHC 3 cut(s) 145, 2484, 3057
Bsp13I TCCGGA 1 cut(s) 916
Bsp143I GATC 9 cut(s) 924, 1363, 1398, 1600, 1691, 2379, 2662, 2797, 3075
Bsp1720I GCTNAGC 1 cut(s) 2267
Bsp19I CCATGG 1 cut(s) 2683
BspACI CCGC 7 cut(s) 5, 1335, 2214, 2920, 2922, 2934, 3282
BspANI GGCC 6 cut(s) 208, 274, 1176, 1550, 2582, 2925
BspCNI CTCAG 8 cut(s) 69, 1052, 1143, 1744, 1867, 2053, 2386, 2822
BspEI TCCGGA 1 cut(s) 916
BspFNI CGCG 2 cut(s) 965, 2922
BspHI TCATGA 1 cut(s) 1482
BspLI GGNNCC 6 cut(s) 38, 517, 2158, 2581, 2971, 3120
BspMAI CTGCAG 2 cut(s) 609, 3154
BspPI GGATC 4 cut(s) 1371, 1406, 1699, 3083
BspT104I TTCGAA 1 cut(s) 2538
BspT107I GGYRCC 1 cut(s) 515
BspTI CTTAAG 1 cut(s) 2141
BspTNI GGTCTC 1 cut(s) 158
BsrDI GCAATG 1 cut(s) 3015
BsrFI RCCGGY 1 cut(s) 1657
BsrI ACTGG 7 cut(s) 1073, 1753, 2008, 2885, 2915, 2984, 3013
BssAI RCCGGY 1 cut(s) 1657
BssMI GATC 9 cut(s) 924, 1363, 1398, 1600, 1691, 2379, 2662, 2797, 3075
BssNI GRCGYC 1 cut(s) 771
BssSI CACGAG 1 cut(s) 306
BssT1I CCWWGG 4 cut(s) 1026, 1177, 2683, 2874
Bst2BI CACGAG 1 cut(s) 306
Bst2UI CCWGG 8 cut(s) 334, 1361, 1422, 1547, 1857, 2793, 3207, 3357
Bst6I CTCTTC 3 cut(s) 1855, 2107, 2252
BstACI GRCGYC 1 cut(s) 771
BstAFI CTTAAG 1 cut(s) 2141
BstBAI YACGTR 1 cut(s) 2907
BstBI TTCGAA 1 cut(s) 2538
BstC8I GCNNGC 4 cut(s) 1260, 1337, 1757, 2062
BstDSI CCRYGG 2 cut(s) 2683, 2920
BstENI CCTNNNNNAGG 1 cut(s) 1772
BstF5I GGATG 6 cut(s) 841, 1381, 2779, 2940, 3000, 3325
BstFNI CGCG 2 cut(s) 965, 2922
BstH2I RGCGCY 1 cut(s) 1259
BstHHI GCGC 2 cut(s) 95, 1258
BstKTI GATC 9 cut(s) 927, 1366, 1401, 1603, 1694, 2382, 2665, 2800, 3078
BstMAI GTCTC 7 cut(s) 158, 710, 1905, 2131, 2812, 3290, 3354
BstMBI GATC 9 cut(s) 924, 1363, 1398, 1600, 1691, 2379, 2662, 2797, 3075
BstMWI GCNNNNNNNGC 5 cut(s) 1255, 1556, 1736, 2931, 3211
BstNI CCWGG 8 cut(s) 334, 1361, 1422, 1547, 1857, 2793, 3207, 3357
BstNSI RCATGY 4 cut(s) 448, 1387, 2824, 3235
BstSFI CTRYAG 8 cut(s) 242, 264, 605, 1195, 1302, 1435, 3150, 3385
BstSLI GKGCMC 1 cut(s) 145
BstUI CGCG 2 cut(s) 965, 2922
BstV1I GCAGC 7 cut(s) 1563, 1566, 2358, 3072, 3136, 3144, 3198
BstV2I GAAGAC 4 cut(s) 91, 636, 1493, 2745
BstX2I RGATCY 2 cut(s) 1363, 1691
BstXI CCANNNNNNTGG 1 cut(s) 2176
BstYI RGATCY 2 cut(s) 1363, 1691
BsuI GTATCC 2 cut(s) 1428, 1863
BsuRI GGCC 6 cut(s) 208, 274, 1176, 1550, 2582, 2925
BtgI CCRYGG 2 cut(s) 2683, 2920
BtgZI GCGATG 1 cut(s) 195
BtsCI GGATG 6 cut(s) 841, 1381, 2779, 2940, 3000, 3325
BtsI GCAGTG 4 cut(s) 1893, 2181, 3159, 3291
Cac8I GCNNGC 4 cut(s) 1260, 1337, 1757, 2062
CciI TCATGA 1 cut(s) 1482
CfoI GCGC 2 cut(s) 95, 1258
Cfr10I RCCGGY 1 cut(s) 1657
Cfr13I GGNCC 7 cut(s) 37, 206, 1070, 1940, 2029, 2580, 3118
Cfr42I CCGCGG 1 cut(s) 2923
CseI GACGC 4 cut(s) 779, 2260, 2717, 3307
Csp6I GTAC 6 cut(s) 290, 516, 865, 967, 2840, 2908
CviQI GTAC 6 cut(s) 290, 516, 865, 967, 2840, 2908
DpnI GATC 9 cut(s) 926, 1365, 1400, 1602, 1693, 2381, 2664, 2799, 3077
DpnII GATC 9 cut(s) 924, 1363, 1398, 1600, 1691, 2379, 2662, 2797, 3075
EaeI YGGCCR 2 cut(s) 1548, 2923
Eam1104I CTCTTC 3 cut(s) 1855, 2107, 2252
EarI CTCTTC 3 cut(s) 1855, 2107, 2252
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 4 cut(s) 1026, 1177, 2683, 2874
Eco24I GRGCYC 1 cut(s) 3057
Eco31I GGTCTC 1 cut(s) 158
Eco32I GATATC 3 cut(s) 325, 823, 2343
Eco47I GGWCC 5 cut(s) 37, 1070, 1940, 2029, 3118
Eco47III AGCGCT 1 cut(s) 1257
Eco57I CTGAAG 2 cut(s) 956, 1754
Eco88I CYCGRG 1 cut(s) 3057
EcoNI CCTNNNNNAGG 1 cut(s) 1772
EcoRI GAATTC 1 cut(s) 2621
EcoRII CCWGG 8 cut(s) 332, 1359, 1420, 1545, 1855, 2791, 3205, 3355
EcoRV GATATC 3 cut(s) 325, 823, 2343
EcoT14I CCWWGG 4 cut(s) 1026, 1177, 2683, 2874
EcoT22I ATGCAT 3 cut(s) 362, 1173, 3375
EcoT38I GRGCYC 1 cut(s) 3057
ErhI CCWWGG 4 cut(s) 1026, 1177, 2683, 2874
Esp3I CGTCTC 1 cut(s) 3290
FauI CCCGC 2 cut(s) 1328, 2207
FauNDI CATATG 4 cut(s) 217, 860, 2300, 3040
FbaI TGATCA 2 cut(s) 924, 2662
FblI GTMKAC 1 cut(s) 2571
Fnu4HI GCNGC 9 cut(s) 1577, 1580, 2372, 2923, 3086, 3150, 3158, 3212, 3282
FokI GGATG 6 cut(s) 848, 1388, 2786, 2927, 2987, 3312
FriOI GRGCYC 1 cut(s) 3057
Fsp4HI GCNGC 9 cut(s) 1577, 1580, 2372, 2923, 3086, 3150, 3158, 3212, 3282
GlaI GCGC 2 cut(s) 94, 1257
GluI GCNGC 9 cut(s) 1577, 1580, 2372, 2923, 3086, 3150, 3158, 3212, 3282
GsuI CTGGAG 1 cut(s) 2967
HaeII RGCGCY 1 cut(s) 1259
HaeIII GGCC 6 cut(s) 208, 274, 1176, 1550, 2582, 2925
HapII CCGG 7 cut(s) 405, 452, 774, 917, 1109, 1658, 3023
HgaI GACGC 4 cut(s) 779, 2260, 2717, 3307
HhaI GCGC 2 cut(s) 95, 1258
Hin1I GRCGYC 1 cut(s) 771
Hin6I GCGC 2 cut(s) 93, 1256
HinP1I GCGC 2 cut(s) 93, 1256
HincII GTYRAC 1 cut(s) 1786
HindII GTYRAC 1 cut(s) 1786
HindIII AAGCTT 2 cut(s) 1186, 1348
HpaII CCGG 7 cut(s) 405, 452, 774, 917, 1109, 1658, 3023
Hpy188III TCNNGA 9 cut(s) 525, 554, 917, 1049, 1409, 1483, 1733, 2383, 2771
Hpy99I CGWCG 1 cut(s) 2276
HpyCH4IV ACGT 5 cut(s) 1317, 1323, 2523, 2838, 2906
HpyF10VI GCNNNNNNNGC 5 cut(s) 1255, 1556, 1736, 2931, 3211
HpySE526I ACGT 5 cut(s) 1317, 1323, 2523, 2838, 2906
Hsp92I GRCGYC 1 cut(s) 771
HspAI GCGC 2 cut(s) 93, 1256
Kpn2I TCCGGA 1 cut(s) 916
KpnI GGTACC 1 cut(s) 519
Ksp22I TGATCA 2 cut(s) 924, 2662
KspI CCGCGG 1 cut(s) 2923
Kzo9I GATC 9 cut(s) 924, 1363, 1398, 1600, 1691, 2379, 2662, 2797, 3075
LmnI GCTCC 2 cut(s) 986, 3187
Lsp1109I GCAGC 7 cut(s) 1563, 1566, 2358, 3072, 3136, 3144, 3198
LweI GCATC 3 cut(s) 680, 1158, 2128
MaeII ACGT 5 cut(s) 1317, 1323, 2523, 2838, 2906
MalI GATC 9 cut(s) 926, 1365, 1400, 1602, 1693, 2381, 2664, 2799, 3077
MboI GATC 9 cut(s) 924, 1363, 1398, 1600, 1691, 2379, 2662, 2797, 3075
MflI RGATCY 2 cut(s) 1363, 1691
MhlI GDGCHC 3 cut(s) 145, 2484, 3057
MlsI TGGCCA 1 cut(s) 1550
MluI ACGCGT 1 cut(s) 963
MluNI TGGCCA 1 cut(s) 1550
MlyI GAGTC 3 cut(s) 362, 537, 626
MmeI TCCRAC 5 cut(s) 1776, 2007, 2184, 2809, 2997
Mox20I TGGCCA 1 cut(s) 1550
Mph1103I ATGCAT 3 cut(s) 362, 1173, 3375
MroI TCCGGA 1 cut(s) 916
MscI TGGCCA 1 cut(s) 1550
MslI CAYNNNNRTG 2 cut(s) 3165, 3368
Msp20I TGGCCA 1 cut(s) 1550
MspA1I CMGCKG 2 cut(s) 2922, 2934
MspCI CTTAAG 1 cut(s) 2141
MspI CCGG 7 cut(s) 405, 452, 774, 917, 1109, 1658, 3023
Mva1269I GAATGC 2 cut(s) 1928, 3373
MvaI CCWGG 8 cut(s) 334, 1361, 1422, 1547, 1857, 2793, 3207, 3357
MvnI CGCG 2 cut(s) 965, 2922
MwoI GCNNNNNNNGC 5 cut(s) 1255, 1556, 1736, 2931, 3211
NciI CCSGG 5 cut(s) 406, 452, 775, 1109, 3023
NcoI CCATGG 1 cut(s) 2683
NdeI CATATG 4 cut(s) 217, 860, 2300, 3040
NdeII GATC 9 cut(s) 924, 1363, 1398, 1600, 1691, 2379, 2662, 2797, 3075
NlaIV GGNNCC 6 cut(s) 38, 517, 2158, 2581, 2971, 3120
NmuCI GTSAC 9 cut(s) 388, 767, 1706, 1832, 2729, 2744, 2878, 2936, 3011
NsiI ATGCAT 3 cut(s) 362, 1173, 3375
NspI RCATGY 4 cut(s) 448, 1387, 2824, 3235
NspV TTCGAA 1 cut(s) 2538
PagI TCATGA 1 cut(s) 1482
PciI ACATGT 2 cut(s) 444, 2820
PcsI WCGNNNNNNNCGW 1 cut(s) 313
PctI GAATGC 2 cut(s) 1928, 3373
PflMI CCANNNNNTGG 1 cut(s) 2003
PfoI TCCNGGA 3 cut(s) 1359, 1855, 3355
PkrI GCNGC 9 cut(s) 1578, 1581, 2373, 2924, 3087, 3151, 3159, 3213, 3283
PleI GAGTC 3 cut(s) 361, 536, 626
PpsI GAGTC 3 cut(s) 361, 536, 626
Ppu21I YACGTR 1 cut(s) 2907
PscI ACATGT 2 cut(s) 444, 2820
PsiI TTATAA 1 cut(s) 1241
Psp6I CCWGG 8 cut(s) 332, 1359, 1420, 1545, 1855, 2791, 3205, 3355
PspGI CCWGG 8 cut(s) 332, 1359, 1420, 1545, 1855, 2791, 3205, 3355
PspN4I GGNNCC 6 cut(s) 38, 517, 2158, 2581, 2971, 3120
PspPI GGNCC 7 cut(s) 37, 206, 1070, 1940, 2029, 2580, 3118
PsrI GAACNNNNNNTAC 2 cut(s) 848, 880
PstI CTGCAG 2 cut(s) 609, 3154
PsuI RGATCY 2 cut(s) 1363, 1691
RsaI GTAC 6 cut(s) 291, 517, 866, 968, 2841, 2909
RsaNI GTAC 6 cut(s) 290, 516, 865, 967, 2840, 2908
RseI CAYNNNNRTG 2 cut(s) 3165, 3368
SacII CCGCGG 1 cut(s) 2923
SatI GCNGC 9 cut(s) 1577, 1580, 2372, 2923, 3086, 3150, 3158, 3212, 3282
Sau3AI GATC 9 cut(s) 924, 1363, 1398, 1600, 1691, 2379, 2662, 2797, 3075
Sau96I GGNCC 7 cut(s) 37, 206, 1070, 1940, 2029, 2580, 3118
SchI GAGTC 3 cut(s) 362, 537, 626
SduI GDGCHC 3 cut(s) 145, 2484, 3057
SfaNI GCATC 3 cut(s) 680, 1158, 2128
SfcI CTRYAG 8 cut(s) 242, 264, 605, 1195, 1302, 1435, 3150, 3385
Sfr303I CCGCGG 1 cut(s) 2923
SfuI TTCGAA 1 cut(s) 2538
SgrBI CCGCGG 1 cut(s) 2923
SinI GGWCC 5 cut(s) 37, 1070, 1940, 2029, 3118
SmiMI CAYNNNNRTG 2 cut(s) 3165, 3368
SmlI CTYRAG 4 cut(s) 1914, 2141, 3050, 3139
SmoI CTYRAG 4 cut(s) 1914, 2141, 3050, 3139
SpeI ACTAGT 3 cut(s) 1490, 2315, 3224
SsiI CCGC 7 cut(s) 5, 1335, 2214, 2920, 2922, 2934, 3282
SspI AATATT 1 cut(s) 720
StyI CCWWGG 4 cut(s) 1026, 1177, 2683, 2874
TaiI ACGT 5 cut(s) 1320, 1326, 2526, 2841, 2909
TaqI TCGA 5 cut(s) 531, 553, 1005, 1449, 2538
TaqII GACCGA 1 cut(s) 1058
TauI GCSGC 2 cut(s) 2925, 3284
TseFI GTSAC 9 cut(s) 388, 767, 1706, 1832, 2729, 2744, 2878, 2936, 3011
TseI GCWGC 7 cut(s) 1576, 1579, 2371, 3085, 3149, 3157, 3211
Tsp45I GTSAC 9 cut(s) 388, 767, 1706, 1832, 2729, 2744, 2878, 2936, 3011
TspGWI ACGGA 2 cut(s) 353, 3307
Van91I CCANNNNNTGG 1 cut(s) 2003
Vha464I CTTAAG 1 cut(s) 2141
VpaK11BI GGWCC 5 cut(s) 37, 1070, 1940, 2029, 3118
XagI CCTNNNNNAGG 1 cut(s) 1772
XapI RAATTY 8 cut(s) 472, 841, 1510, 1880, 2386, 2621, 3331, 3345
XbaI TCTAGA 1 cut(s) 1408
XceI RCATGY 4 cut(s) 448, 1387, 2824, 3235
XmiI GTMKAC 1 cut(s) 2571
Zsp2I ATGCAT 3 cut(s) 362, 1173, 3375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.