Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0004802

Physical Location & Seq

Genomic Coordinates Forward (+)

2797797 .. 2817123

Gene Structure 19327 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG037900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2940 bp

ATGGCGGAATTTGTTGGTAGCCGAGCTAGTTTCTGGGTTCAGTCCAATGCTTTGCTCAGAAAGAACTTAACCTTTCAGAAACGAAGAATGTGCGCCAACATTGCGCTCATTTTAATACCAGTTTTCTTCTGCATATTCTTCGCCGTTATCCAATTCCTGATAGATAACAAGTTGGTCGCAATTGCCATAACGGCATGCGAGAAGAGGCCAAGGCTATTGGGTCCAGAGACTCTGATTGCTCAACAGTGTGCAATCACTTCTCCTCCGGAATGGCCTCCCTTGGTAAGACTACCAGGAGCCCCTTCTCGCTCTTTCCGAAGCGATGACCCTGATCCCAAGCCCGATGAGGAGTGCTGGTTGGAAGGCACTTGCCCTGTGACGATACTTATCACCGGGAATAACCAGACATTTGGACAAGAATTGGGTTCAAACATGTTGCCTCCCGATGATTTGCCGAAAAATTCCTCCGGCAACCTTACGGATTGGACCAAATTTGTCCTGGGTTCACACTACGATGCATCACAATTTTATATGGATCCTGCTTTCGAGTCAGATCGCAGGAACTTTTATCTGCAGAATCAATGCAAGGATGATGAAGATCGGGTCATCAGTGCTCCAGTTCAAGTATTAGCAAATAACGAGCCATTAAAAACAGAGGTTGAATGTCTCCGATGCTTTATATTGTGGCGTAGTAGTTATTCTGAAATAAATGATGAACTGTTCAAAGGTCAGAGGAAGGGGAATCAACATAGCGAAGCTAATGACACACTTTCAGCCTATGATATCTCAAACTCAGATGAGAATACTTACAATGTGACCATATGGTACGATTCAAACCAGGGCGACAATACGAATTTGAAACGGATTCCACGCTTGGTCAATATGGCATCAAACGCCTACCTTCGGTTAGTGAAAGGAAATGAAACAAAAATTATGTTCGACTTTGTTAAGGAAATGCCTAAGGGTTTTACCCTAAACCTTCCTGATTTTACGGCACTGATAGGTCCATTGTTGTTTTCATGGGTTGTTTTACAGCTGTTCCCGGTTGTGTTGGCGTCTCTGGTTTATGAAAAACAAGAAAGACTGAGAGTGATGATGAAAATGCATGGCCTCGGTGATGGGCCTTACTGGATGATTCAATATTCTTATTTTCTTGCAATATCTGTACTCTACATTATATGTTTTGTTGGATTTGGTTCACTTGTAGGCTTACATTTCTTCTACGAACATGACTACTCCCTCCAATTTATATTTTACTTCTTCTTTGTAAACTTGCAAATAGCGCTGGCTTTTCTTTTGTCGTCAATGTTCTCGCACACTAGGGCTGCTACAGTTGTAGCTTACCTTTTCGTCTTTGGTAGCGGGCTTCTCGGGTCCTCTTTCTTTGAGAACCTTCTCGATGGTGATCAAACAGTGTCTAAAGCGTGGATCATTCTTCTAGAGTTATATCCTGGCTTCTCTCTGTACCGAGGCTTATACGAGTTTGGACAATATACCTCCGAAGCGAAAATCACGAAGACTGGTGGTATGGGTTGGGGGAATTTGAATGATAGCGCAAATGGTATGAGAGACGTCTTGACCATCATGCTATTAGAGTGGGCAGTGCTGCTGCTTCTTGCATTTTACATAGATCAAGTTGTGACATGTGGAAAATCTCCTCTTTTCTTCTTGCCAAGAAAGAAAGCACCAGCTTTCCAAATCCCTAGTATGGAAAGGCGTGGATCGAAAAGTTTTGGTGACATGGAGAAACCTGATGTCGCTCAAGAGGCAAATCATCCCTCGGATCATCATGGCCAGAAGAATGAGTTGCAGACCGTGACAGGGCCCGTTTGTTTGGTGCAGGGTTTGTTGCTAACTTGTTCACCTAAGATGAATAAGATATCTTTGTATTGGTGTTTTCTTTTCCTGCCATTGATCTTGAACTTTTCTGAGGCAAATGATGAAAAGGTGGGAAATATTTATGAATTGAAGAAGGGAAATTTCTCCGTGAAGCTGACGAATTATGGAGCAACTGTGCTCTCTGTTGTTCTCCCTGATAAGAATGGGAAGTTAGATGATGTTGTTCTTGGGTTTGAATCCCTCAAAGATTACACAAATGATTCGGTCTACTTTGGGGCCACCGTTGGGCGTGTTGCTAATAGAATTGGTGGAGCTGAATTCACTTTGAATGGTCACCACTATAAGTTGGTTCCTAATGATCATGGAAAGAACACTCTCCATGGTGGCTCTAAAGGATTCAGTGATGTTCTATGGACAGTGAAGCATCACATTGTAGATAGTCACATAACGTTCACCTATAATAGTCGGGATGGTGAAGAAGGCTTCCCCGGTGATCTTTCAGTCTCAGCAACATACATGTTTATTGAACCACACGCTCTAGCTATTAAAATGGAAGCCAAAGCTCTCACCAAGGCCACACCAGTAAACCTAGCCCACCACACCTACTGGAATCTCCGCGGCCACGCCAGTGGTGACATCCTCTCTCACAAAATCCACATTTTTGGATCCAACATCACCCCAGTAAATGATGAACTCATCCCTACCGGCGACATTGCCCCCGTGAAAGGAACACCCTACGATTTCCTTGAGCCCCGAGAGATCGGTAGCAGGATCAATGAGCTGCCTGATGGTTATGACATCAACTACGTTCTGGACCCTTCCAGCCCTGAGCACTTGAGGAAGGCTGCAATGCTGCATGACAGTTTTTCTGGGAGAAAATTGGAGCTGTGGACTAACCAGCCAGGGCTGCAATTTTACACTAGTAACATGCTGGATGATGTGAAAGGGAAAGGTGGATTTGTGTATAAAAAGCATGCCGCAGTGTGCTTGGAGACACAGGGTTTCCCAGATTCCGTGAATCATCCAAATTTCCCTTCACAAATTGTGAATCCAGGAGACACTTATCTGCATGCTATGGTGTATAGGTTCACAGCTAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006869 GO:0008150 GO:0009506 GO:0010876 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

979

Amino Acids

110.1

Weight (kDa)

5.95

Isoelectric Point (pI)

37.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC2_membrane_3	PF12698	234 - 542	5.8e-14	ABC-2 family transporter protein
Aldose_epim	PF01263	653 - 975	9.3e-94	Aldose 1-epimerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47800
fragaria_vesca	FvH4_5g15261 FvH4_6g49081
malus_domestica	MD14G1196700.v1.1 MD17G1048800.v1.1
prunus_persica	Prupe.3G270200_v2.0.a1 Prupe.5G188800_v2.0.a1 Prupe.5G188800_v2.0.a1
pyrus_communis	pycom14g16350 pycom17g04380
rosa_chinensis	RchiOBHm_Chr2g0168911 RchiOBHm_Chr7g0180821
rosa_laevigata	RLG00000005227 RLG00000021813
rosa_multiflora	Rmu_sc0007457.1_g000006 Rmu_ssc0000393.1_g000013
rosa_roxburghii	Rroxscaffold_2G00082600 Rroxscaffold_3G00272500
rosa_rugosa	Rorug02G0536000 Rorug06G0436400.1 Rorug06G0436500.1 Rorug06G0436600
rosa_samantha	Rh2AG607000 Rh2BG619800 Rh2CG588400 Rh2DG630500 Rh7BG037900 Rh7CG039400 Rh7DG037900
rosa_wichuraiana	Rw2G050330 Rw7G003140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1575
AccI	GTMKAC	1 cut(s)	2106
AccII	CGCG	1 cut(s)	2457
AccIII	TCCGGA	1 cut(s)	265
AciI	CCGC	5 cut(s)	5, 1362, 2455, 2457, 2817
AclI	AACGTT	1 cut(s)	2288
AclWI	GGATC	9 cut(s)	326, 530, 543, 1436, 1729, 1791, 2499, 2512, 2618
AcoI	YGGCCR	2 cut(s)	1792, 2458
AcsI	RAATTY	8 cut(s)	8, 460, 491, 853, 1540, 1978, 2156, 2866
AcyI	GRCGYC	2 cut(s)	1055, 1572
AfaI	GTAC	3 cut(s)	827, 1167, 1466
AfeI	AGCGCT	1 cut(s)	1284
AfiI	CCNNNNNNNGG	5 cut(s)	903, 1708, 1821, 2124, 2564
AflIII	ACRYGT	3 cut(s)	432, 1643, 2355
AhlI	ACTAGT	1 cut(s)	2759
AjnI	CCWGG	6 cut(s)	292, 498, 837, 1450, 2740, 2890
AjuI	GAANNNNNNNTTGG	2 cut(s)	2857, 2889
AleI	CACNNNNGTG	1 cut(s)	2466
Alw21I	GWGCWC	3 cut(s)	616, 2019, 2673
Alw26I	GTCTC	7 cut(s)	221, 671, 1062, 1563, 2347, 2825, 2889
AlwI	GGATC	9 cut(s)	326, 530, 543, 1436, 1729, 1791, 2499, 2512, 2618
Ama87I	CYCGRG	2 cut(s)	1370, 2592
Aor13HI	TCCGGA	1 cut(s)	265
Aor51HI	AGCGCT	1 cut(s)	1284
AoxI	GGCC	9 cut(s)	206, 272, 1108, 1121, 1792, 1823, 2115, 2412, 2458
ApaI	GGGCCC	1 cut(s)	1827
ApeKI	GCWGC	7 cut(s)	1325, 1606, 1609, 2620, 2684, 2692, 2746
ApoI	RAATTY	8 cut(s)	8, 460, 491, 853, 1540, 1978, 2156, 2866
AspLEI	GCGC	4 cut(s)	95, 106, 1285, 1556
AspS9I	GGNCC	9 cut(s)	221, 486, 1004, 1121, 1374, 1823, 1824, 2115, 2653
AsuC2I	CCSGG	3 cut(s)	394, 1043, 2328
AvaI	CYCGRG	2 cut(s)	1370, 2592
AvaII	GGWCC	5 cut(s)	221, 486, 1004, 1374, 2653
AxyI	CCTNAGG	1 cut(s)	960
BaeGI	GKGCMC	1 cut(s)	1827
BalI	TGGCCA	1 cut(s)	1794
BamHI	GGATCC	2 cut(s)	535, 2504
BanII	GRGCYC	3 cut(s)	301, 1827, 2592
BbsI	GAAGAC	1 cut(s)	1523
Bbv12I	GWGCWC	3 cut(s)	616, 2019, 2673
BbvI	GCAGC	7 cut(s)	1312, 1593, 1596, 2607, 2671, 2679, 2733
BccI	CCATC	5 cut(s)	1112, 1394, 1589, 2303, 2621
BceAI	ACGGC	3 cut(s)	128, 207, 1008
BcgI	CGANNNNNNTGC	4 cut(s)	72, 106, 121, 155
BciT130I	CCWGG	6 cut(s)	294, 500, 839, 1452, 2742, 2892
BclI	TGATCA	2 cut(s)	1405, 2197
BcnI	CCSGG	3 cut(s)	394, 1043, 2328
BcoDI	GTCTC	7 cut(s)	221, 671, 1062, 1563, 2347, 2825, 2889
BcuI	ACTAGT	1 cut(s)	2759
BfaI	CTAG	8 cut(s)	27, 1320, 1439, 1704, 2378, 2429, 2760, 2938
BfmI	CTRYAG	2 cut(s)	572, 1329
BfoI	RGCGCY	1 cut(s)	1286
BglI	GCCNNNNNGGC	1 cut(s)	191
BisI	GCNGC	9 cut(s)	1326, 1607, 1610, 2458, 2621, 2685, 2693, 2747, 2817
BlsI	GCNGC	9 cut(s)	1327, 1608, 1611, 2459, 2622, 2686, 2694, 2748, 2818
Bme1390I	CCNGG	9 cut(s)	294, 394, 500, 839, 1043, 1452, 2328, 2742, 2892
Bme18I	GGWCC	5 cut(s)	221, 486, 1004, 1374, 2653
BmeT110I	CYCGRG	2 cut(s)	1370, 2592
BmgT120I	GGNCC	9 cut(s)	221, 486, 1004, 1121, 1374, 1823, 1824, 2115, 2653
BmiI	GGNNCC	9 cut(s)	222, 298, 537, 1375, 1825, 2116, 2190, 2506, 2655
BmrFI	CCNGG	9 cut(s)	294, 394, 500, 839, 1043, 1452, 2328, 2742, 2892
BmrI	ACTGGG	1 cut(s)	2513
BmsI	GCATC	5 cut(s)	505, 527, 662, 896, 2272
BmuI	ACTGGG	1 cut(s)	2513
BpiI	GAAGAC	1 cut(s)	1523
BpmI	CTGGAG	1 cut(s)	600
Bpu10I	CCTNAGC	1 cut(s)	2667
BpuEI	CTTGAG	3 cut(s)	1746, 2606, 2695
BpuMI	CCSGG	3 cut(s)	394, 1043, 2328
BsaBI	GATNNNNATC	3 cut(s)	386, 597, 1404
BsaHI	GRCGYC	2 cut(s)	1055, 1572
BsaWI	WCCGGW	1 cut(s)	265
BsaXI	ACNNNNNCTCC	6 cut(s)	247, 277, 341, 371, 1998, 2028
Bsc4I	CCNNNNNNNGG	5 cut(s)	903, 1708, 1821, 2124, 2564
Bse118I	RCCGGY	1 cut(s)	2543
Bse1I	ACTGG	8 cut(s)	119, 617, 1133, 1525, 2420, 2450, 2466, 2519
Bse21I	CCTNAGG	1 cut(s)	960
Bse3DI	GCAATG	3 cut(s)	99, 2550, 2694
Bse8I	GATNNNNATC	3 cut(s)	386, 597, 1404
BseAI	TCCGGA	1 cut(s)	265
BseBI	CCWGG	6 cut(s)	294, 500, 839, 1452, 2742, 2892
BseGI	GGATG	8 cut(s)	595, 1137, 1774, 2314, 2475, 2535, 2779, 2860
BseJI	GATNNNNATC	3 cut(s)	386, 597, 1404
BseLI	CCNNNNNNNGG	5 cut(s)	903, 1708, 1821, 2124, 2564
BseMI	GCAATG	3 cut(s)	99, 2550, 2694
BseMII	CTCAG	6 cut(s)	70, 807, 1076, 1920, 2358, 2658
BseNI	ACTGG	8 cut(s)	119, 617, 1133, 1525, 2420, 2450, 2466, 2519
BseRI	GAGGAG	3 cut(s)	252, 362, 1647
BseSI	GKGCMC	1 cut(s)	1827
BseXI	GCAGC	7 cut(s)	1312, 1593, 1596, 2607, 2671, 2679, 2733
BsgI	GTGCAG	1 cut(s)	1859
Bsh1236I	CGCG	1 cut(s)	2457
BshFI	GGCC	9 cut(s)	208, 274, 1110, 1123, 1794, 1825, 2117, 2414, 2460
BsiHKAI	GWGCWC	3 cut(s)	616, 2019, 2673
BsiHKCI	CYCGRG	2 cut(s)	1370, 2592
BsiSI	CCGG	6 cut(s)	266, 393, 468, 1043, 2328, 2544
BslI	CCNNNNNNNGG	5 cut(s)	903, 1708, 1821, 2124, 2564
BsmAI	GTCTC	7 cut(s)	221, 671, 1062, 1563, 2347, 2825, 2889
BsmBI	CGTCTC	2 cut(s)	1062, 1563
BsnI	GGCC	9 cut(s)	208, 274, 1110, 1123, 1794, 1825, 2117, 2414, 2460
BsoBI	CYCGRG	2 cut(s)	1370, 2592
Bsp120I	GGGCCC	1 cut(s)	1823
Bsp1286I	GDGCHC	6 cut(s)	301, 616, 1827, 2019, 2592, 2673
Bsp13I	TCCGGA	1 cut(s)	265
Bsp19I	CCATGG	1 cut(s)	2218
BspACI	CCGC	5 cut(s)	5, 1362, 2455, 2457, 2817
BspANI	GGCC	9 cut(s)	208, 274, 1110, 1123, 1794, 1825, 2117, 2414, 2460
BspCNI	CTCAG	6 cut(s)	69, 806, 1077, 1921, 2357, 2659
BspEI	TCCGGA	1 cut(s)	265
BspFNI	CGCG	1 cut(s)	2457
BspLI	GGNNCC	9 cut(s)	222, 298, 537, 1375, 1825, 2116, 2190, 2506, 2655
BspMAI	CTGCAG	1 cut(s)	576
BspPI	GGATC	9 cut(s)	326, 530, 543, 1436, 1729, 1791, 2499, 2512, 2618
BsrDI	GCAATG	3 cut(s)	99, 2550, 2694
BsrFI	RCCGGY	1 cut(s)	2543
BsrI	ACTGG	8 cut(s)	119, 617, 1133, 1525, 2420, 2450, 2466, 2519
BssAI	RCCGGY	1 cut(s)	2543
BssNI	GRCGYC	2 cut(s)	1055, 1572
BssT1I	CCWWGG	4 cut(s)	209, 279, 2218, 2409
Bst2UI	CCWGG	6 cut(s)	294, 500, 839, 1452, 2742, 2892
Bst4CI	ACNGT	9 cut(s)	246, 720, 1333, 1414, 1816, 2014, 2122, 2257, 2702
Bst6I	CTCTTC	1 cut(s)	197
BstACI	GRCGYC	2 cut(s)	1055, 1572
BstC8I	GCNNGC	5 cut(s)	196, 1287, 1364, 2814, 2910
BstDEI	CTNAG	8 cut(s)	56, 793, 960, 1085, 1866, 1929, 2344, 2667
BstDSI	CCRYGG	2 cut(s)	2218, 2455
BstEII	GGTNACC	1 cut(s)	2171
BstF5I	GGATG	8 cut(s)	595, 1137, 1774, 2314, 2475, 2535, 2779, 2860
BstFNI	CGCG	1 cut(s)	2457
BstH2I	RGCGCY	1 cut(s)	1286
BstHHI	GCGC	4 cut(s)	95, 106, 1285, 1556
BstMAI	GTCTC	7 cut(s)	221, 671, 1062, 1563, 2347, 2825, 2889
BstMWI	GCNNNNNNNGC	6 cut(s)	101, 191, 893, 1282, 1766, 2746
BstNI	CCWGG	6 cut(s)	294, 500, 839, 1452, 2742, 2892
BstNSI	RCATGY	7 cut(s)	198, 436, 1647, 2359, 2770, 2816, 2912
BstPI	GGTNACC	1 cut(s)	2171
BstSCI	CCNGG	9 cut(s)	292, 392, 498, 837, 1041, 1450, 2326, 2740, 2890
BstSFI	CTRYAG	2 cut(s)	572, 1329
BstSLI	GKGCMC	1 cut(s)	1827
BstUI	CGCG	1 cut(s)	2457
BstV1I	GCAGC	7 cut(s)	1312, 1593, 1596, 2607, 2671, 2679, 2733
BstV2I	GAAGAC	1 cut(s)	1523
BstX2I	RGATCY	2 cut(s)	535, 2504
BstXI	CCANNNNNNTGG	3 cut(s)	410, 2468, 2501
BstYI	RGATCY	2 cut(s)	535, 2504
Bsu36I	CCTNAGG	1 cut(s)	960
BsuRI	GGCC	9 cut(s)	208, 274, 1110, 1123, 1794, 1825, 2117, 2414, 2460
BtgI	CCRYGG	2 cut(s)	2218, 2455
BtgZI	GCGATG	1 cut(s)	336
BtsCI	GGATG	8 cut(s)	595, 1137, 1774, 2314, 2475, 2535, 2779, 2860
BtsI	GCAGTG	2 cut(s)	1608, 2826
BtsIMutI	CAGTG	9 cut(s)	251, 616, 995, 1419, 1608, 2245, 2262, 2473, 2826
Cac8I	GCNNGC	5 cut(s)	196, 1287, 1364, 2814, 2910
CfoI	GCGC	4 cut(s)	95, 106, 1285, 1556
Cfr10I	RCCGGY	1 cut(s)	2543
Cfr13I	GGNCC	9 cut(s)	221, 486, 1004, 1121, 1374, 1823, 1824, 2115, 2653
Cfr42I	CCGCGG	1 cut(s)	2458
CseI	GACGC	1 cut(s)	1044
Csp6I	GTAC	3 cut(s)	826, 1166, 1465
CviQI	GTAC	3 cut(s)	826, 1166, 1465
DdeI	CTNAG	8 cut(s)	56, 793, 960, 1085, 1866, 1929, 2344, 2667
EaeI	YGGCCR	2 cut(s)	1792, 2458
Eam1104I	CTCTTC	1 cut(s)	197
EarI	CTCTTC	1 cut(s)	197
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	4 cut(s)	209, 279, 2218, 2409
Eco24I	GRGCYC	3 cut(s)	301, 1827, 2592
Eco32I	GATATC	2 cut(s)	784, 1881
Eco47I	GGWCC	5 cut(s)	221, 486, 1004, 1374, 2653
Eco47III	AGCGCT	1 cut(s)	1284
Eco81I	CCTNAGG	1 cut(s)	960
Eco88I	CYCGRG	2 cut(s)	1370, 2592
Eco91I	GGTNACC	1 cut(s)	2171
EcoO109I	RGGNCCY	2 cut(s)	1374, 1823
EcoO65I	GGTNACC	1 cut(s)	2171
EcoRI	GAATTC	1 cut(s)	2156
EcoRII	CCWGG	6 cut(s)	292, 498, 837, 1450, 2740, 2890
EcoRV	GATATC	2 cut(s)	784, 1881
EcoT14I	CCWWGG	4 cut(s)	209, 279, 2218, 2409
EcoT22I	ATGCAT	2 cut(s)	520, 1107
EcoT38I	GRGCYC	3 cut(s)	301, 1827, 2592
ErhI	CCWWGG	4 cut(s)	209, 279, 2218, 2409
Esp3I	CGTCTC	2 cut(s)	1062, 1563
FauI	CCCGC	1 cut(s)	1355
FauNDI	CATATG	1 cut(s)	821
FbaI	TGATCA	2 cut(s)	1405, 2197
FblI	GTMKAC	1 cut(s)	2106
Fnu4HI	GCNGC	9 cut(s)	1326, 1607, 1610, 2458, 2621, 2685, 2693, 2747, 2817
FokI	GGATG	8 cut(s)	602, 1144, 1761, 2321, 2462, 2522, 2786, 2847
FriOI	GRGCYC	3 cut(s)	301, 1827, 2592
Fsp4HI	GCNGC	9 cut(s)	1326, 1607, 1610, 2458, 2621, 2685, 2693, 2747, 2817
FspBI	CTAG	8 cut(s)	27, 1320, 1439, 1704, 2378, 2429, 2760, 2938
GlaI	GCGC	4 cut(s)	94, 105, 1284, 1555
GluI	GCNGC	9 cut(s)	1326, 1607, 1610, 2458, 2621, 2685, 2693, 2747, 2817
GsuI	CTGGAG	1 cut(s)	600
HaeII	RGCGCY	1 cut(s)	1286
HaeIII	GGCC	9 cut(s)	208, 274, 1110, 1123, 1794, 1825, 2117, 2414, 2460
HapII	CCGG	6 cut(s)	266, 393, 468, 1043, 2328, 2544
HgaI	GACGC	1 cut(s)	1044
HhaI	GCGC	4 cut(s)	95, 106, 1285, 1556
Hin1I	GRCGYC	2 cut(s)	1055, 1572
Hin6I	GCGC	4 cut(s)	93, 104, 1283, 1554
HinP1I	GCGC	4 cut(s)	93, 104, 1283, 1554
HpaII	CCGG	6 cut(s)	266, 393, 468, 1043, 2328, 2544
Hpy166II	GTNNAC	9 cut(s)	506, 1199, 1270, 1862, 2107, 2292, 2425, 2730, 2928
Hpy8I	GTNNAC	9 cut(s)	506, 1199, 1270, 1862, 2107, 2292, 2425, 2730, 2928
HpyCH4III	ACNGT	9 cut(s)	246, 720, 1333, 1414, 1816, 2014, 2122, 2257, 2702
HpyCH4IV	ACGT	3 cut(s)	1572, 2288, 2646
HpyF10VI	GCNNNNNNNGC	6 cut(s)	101, 191, 893, 1282, 1766, 2746
HpyF3I	CTNAG	8 cut(s)	56, 793, 960, 1085, 1866, 1929, 2344, 2667
HpySE526I	ACGT	3 cut(s)	1572, 2288, 2646
Hsp92I	GRCGYC	2 cut(s)	1055, 1572
HspAI	GCGC	4 cut(s)	93, 104, 1283, 1554
Kpn2I	TCCGGA	1 cut(s)	265
Ksp22I	TGATCA	2 cut(s)	1405, 2197
KspI	CCGCGG	1 cut(s)	2458
LmnI	GCTCC	5 cut(s)	296, 619, 2006, 2150, 2722
Lsp1109I	GCAGC	7 cut(s)	1312, 1593, 1596, 2607, 2671, 2679, 2733
LweI	GCATC	5 cut(s)	505, 527, 662, 896, 2272
MaeI	CTAG	8 cut(s)	27, 1320, 1439, 1704, 2378, 2429, 2760, 2938
MaeII	ACGT	3 cut(s)	1572, 2288, 2646
MaeIII	GTNAC	9 cut(s)	376, 814, 1639, 1736, 1816, 2171, 2279, 2471, 2762
MfeI	CAATTG	1 cut(s)	180
MflI	RGATCY	2 cut(s)	535, 2504
MhlI	GDGCHC	6 cut(s)	301, 616, 1827, 2019, 2592, 2673
MlsI	TGGCCA	1 cut(s)	1794
MluNI	TGGCCA	1 cut(s)	1794
MlyI	GAGTC	2 cut(s)	223, 557
MmeI	TCCRAC	3 cut(s)	339, 1168, 2532
Mox20I	TGGCCA	1 cut(s)	1794
Mph1103I	ATGCAT	2 cut(s)	520, 1107
MroI	TCCGGA	1 cut(s)	265
MscI	TGGCCA	1 cut(s)	1794
MseI	TTAA	5 cut(s)	68, 113, 647, 948, 2385
MslI	CAYNNNNRTG	2 cut(s)	513, 2466
Msp20I	TGGCCA	1 cut(s)	1794
MspA1I	CMGCKG	2 cut(s)	1036, 2457
MspI	CCGG	6 cut(s)	266, 393, 468, 1043, 2328, 2544
MspR9I	CCNGG	9 cut(s)	294, 394, 500, 839, 1043, 1452, 2328, 2742, 2892
MunI	CAATTG	1 cut(s)	180
MvaI	CCWGG	6 cut(s)	294, 500, 839, 1452, 2742, 2892
MvnI	CGCG	1 cut(s)	2457
MwoI	GCNNNNNNNGC	6 cut(s)	101, 191, 893, 1282, 1766, 2746
NciI	CCSGG	3 cut(s)	394, 1043, 2328
NcoI	CCATGG	1 cut(s)	2218
NdeI	CATATG	1 cut(s)	821
NlaIV	GGNNCC	9 cut(s)	222, 298, 537, 1375, 1825, 2116, 2190, 2506, 2655
NmeAIII	GCCGAG	1 cut(s)	47
NmuCI	GTSAC	8 cut(s)	376, 814, 1639, 1736, 1816, 2171, 2279, 2471
NsiI	ATGCAT	2 cut(s)	520, 1107
NspI	RCATGY	7 cut(s)	198, 436, 1647, 2359, 2770, 2816, 2912
OliI	CACNNNNGTG	1 cut(s)	2466
PaeI	GCATGC	3 cut(s)	198, 2816, 2912
PciI	ACATGT	3 cut(s)	432, 1643, 2355
PcsI	WCGNNNNNNNCGW	1 cut(s)	313
PfoI	TCCNGGA	1 cut(s)	2890
PkrI	GCNGC	9 cut(s)	1327, 1608, 1611, 2459, 2622, 2686, 2694, 2748, 2818
PleI	GAGTC	2 cut(s)	223, 556
PpsI	GAGTC	2 cut(s)	223, 556
PpuMI	RGGWCCY	1 cut(s)	1374
PscI	ACATGT	3 cut(s)	432, 1643, 2355
Psp1406I	AACGTT	1 cut(s)	2288
Psp5II	RGGWCCY	1 cut(s)	1374
Psp6I	CCWGG	6 cut(s)	292, 498, 837, 1450, 2740, 2890
PspEI	GGTNACC	1 cut(s)	2171
PspGI	CCWGG	6 cut(s)	292, 498, 837, 1450, 2740, 2890
PspN4I	GGNNCC	9 cut(s)	222, 298, 537, 1375, 1825, 2116, 2190, 2506, 2655
PspOMI	GGGCCC	1 cut(s)	1823
PspPI	GGNCC	9 cut(s)	221, 486, 1004, 1121, 1374, 1823, 1824, 2115, 2653
PspPPI	RGGWCCY	1 cut(s)	1374
PstI	CTGCAG	1 cut(s)	576
PsuI	RGATCY	2 cut(s)	535, 2504
PvuII	CAGCTG	1 cut(s)	1036
RsaI	GTAC	3 cut(s)	827, 1167, 1466
RsaNI	GTAC	3 cut(s)	826, 1166, 1465
RseI	CAYNNNNRTG	2 cut(s)	513, 2466
SacII	CCGCGG	1 cut(s)	2458
SaqAI	TTAA	5 cut(s)	68, 113, 647, 948, 2385
SatI	GCNGC	9 cut(s)	1326, 1607, 1610, 2458, 2621, 2685, 2693, 2747, 2817
Sau96I	GGNCC	9 cut(s)	221, 486, 1004, 1121, 1374, 1823, 1824, 2115, 2653
SchI	GAGTC	2 cut(s)	223, 557
ScrFI	CCNGG	9 cut(s)	294, 394, 500, 839, 1043, 1452, 2328, 2742, 2892
SduI	GDGCHC	6 cut(s)	301, 616, 1827, 2019, 2592, 2673
SfaNI	GCATC	5 cut(s)	505, 527, 662, 896, 2272
SfcI	CTRYAG	2 cut(s)	572, 1329
Sfr303I	CCGCGG	1 cut(s)	2458
SgrBI	CCGCGG	1 cut(s)	2458
SinI	GGWCC	5 cut(s)	221, 486, 1004, 1374, 2653
SmiMI	CAYNNNNRTG	2 cut(s)	513, 2466
SmlI	CTYRAG	3 cut(s)	1761, 2585, 2674
SmoI	CTYRAG	3 cut(s)	1761, 2585, 2674
SpeI	ACTAGT	1 cut(s)	2759
SphI	GCATGC	3 cut(s)	198, 2816, 2912
SsiI	CCGC	5 cut(s)	5, 1362, 2455, 2457, 2817
SspI	AATATT	2 cut(s)	1142, 1957
SspMI	CTAG	8 cut(s)	27, 1320, 1439, 1704, 2378, 2429, 2760, 2938
StyD4I	CCNGG	9 cut(s)	292, 392, 498, 837, 1041, 1450, 2326, 2740, 2890
StyI	CCWWGG	4 cut(s)	209, 279, 2218, 2409
TaaI	ACNGT	9 cut(s)	246, 720, 1333, 1414, 1816, 2014, 2122, 2257, 2702
TaiI	ACGT	3 cut(s)	1575, 2291, 2649
TaqI	TCGA	4 cut(s)	546, 939, 1398, 1724
TaqII	GACCGA	1 cut(s)	2092
TatI	WGTACW	1 cut(s)	1165
TauI	GCSGC	2 cut(s)	2460, 2819
Tru1I	TTAA	5 cut(s)	68, 113, 647, 948, 2385
Tru9I	TTAA	5 cut(s)	68, 113, 647, 948, 2385
TscAI	CASTG	9 cut(s)	251, 616, 1002, 1419, 1608, 2245, 2262, 2473, 2826
TseFI	GTSAC	8 cut(s)	376, 814, 1639, 1736, 1816, 2171, 2279, 2471
TseI	GCWGC	7 cut(s)	1325, 1606, 1609, 2620, 2684, 2692, 2746
Tsp45I	GTSAC	8 cut(s)	376, 814, 1639, 1736, 1816, 2171, 2279, 2471
TspGWI	ACGGA	4 cut(s)	494, 877, 1975, 2842
TspRI	CASTG	9 cut(s)	251, 616, 1002, 1419, 1608, 2245, 2262, 2473, 2826
VpaK11BI	GGWCC	5 cut(s)	221, 486, 1004, 1374, 2653
XapI	RAATTY	8 cut(s)	8, 460, 491, 853, 1540, 1978, 2156, 2866
XbaI	TCTAGA	1 cut(s)	1438
XceI	RCATGY	7 cut(s)	198, 436, 1647, 2359, 2770, 2816, 2912
XcmI	CCANNNNNNNNNTGG	1 cut(s)	496
XmiI	GTMKAC	1 cut(s)	2106
XspI	CTAG	8 cut(s)	27, 1320, 1439, 1704, 2378, 2429, 2760, 2938
ZraI	GACGTC	1 cut(s)	1573
Zsp2I	ATGCAT	2 cut(s)	520, 1107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.