MD14G1196700.v1.1

Converts alpha-aldose to the beta-anomer

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0004802
Physical Location & Seq
Forward (+)
28696209 .. 28697816
1608 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1196700.v1.1.491

Sequence Viewer

Length: 1062 bp
ATGGCCAAGATATATTTGTTTTTGTGTTTTCTCTTGCTTCCGTTGGTTTTTGATCGCTCTGAGGCAAATGAAAACGTTGGAATTTATGAACTGAAGAAGGGAGATTTCTCCGTGAAGCTCACTAACTATGGTGCCACTGTGCTCTCCGTTATTCTCCCCGATAAGAACGGAAAATTAGACGACATTGTTCTTGGATTCGAATCGCTTAACGAGTACGCGAACGATTCAGTCTACTTTGGAGCCATTGTTGGACGTGTTGCAAACAGAATTGGAGGAGCTCAGTTTGAATTAAATGGCGTCCAATATAAGTTGGTTGCTAATGACGGGAATAACACTCTCCATGGTGGCCTTAAGGGATTCAGTGATGTTGTGTGGACGGTAAAAAGTCACAAAGAAGATAGTCACATAACATTCACCTATGACAGCTTGGATGGTGAACAAGGATTTCCTGGTGATCTTTCTGTGTCGGTAACTTACATGATTATTGACACAAACAAACTCGCTATTAGAATGGAAGCCAAAGCTCATAACAAGGCCACTCCGGTGAACCTAGCACACCACACCTACTGGAATCTCCGCGGCCAAAACAGCGGTGACATCCTCTCGCACACGATCCAGCTTCTTGGGTCCAAGGTTACACCAGTTAATGACCAACTCATCCCCACTGGTGAAATTGCCCCTGTGAAAGGAACACCCTACGACTTCCTTGAGCCCCAAGAAATTGGTAGCAAGATTAGTGGGCTGCCGGATGGATATGACATCAACTATGTGCTTGACCCTTCGAGTCCCAATCATTTGAGGAAGGCAGCAGTGTTGCATGACAGCGTGTCAGGGCGAAAATTGGAACTATGGACCAACAAGCCAGGGCTGCAGTTCTATACAAGCAACATGTTGGACAATGTGCATGGGAAGGGCGGGTTTGTGTACAGAAAGCACGCCGCAGTGTGCTTGGAGACGCAGGGTTTCCCGGATGCTGTGAATCACCCGAATTTCCCTTCGCAGATCGTGAAACCCAGAGAGACCTACTTGCATGTGATGCTTTATAGATTTACAGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00052 ko01100 ko01110 ko01120 ko01130 map00010 map00052 map01100 map01110 map01120 map01130
Pfam Domains
Protein Families
Aldose_epim

Protein Analysis

354

Amino Acids

39.02

Weight (kDa)

6.22

Isoelectric Point (pI)

23.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldose_epim PF01263 29 - 349 1.9e-96 Aldose 1-epimerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 131
AccI GTMKAC 1 cut(s) 231
AccII CGCG 2 cut(s) 218, 579
AciI CCGC 5 cut(s) 577, 579, 591, 915, 939
AclI AACGTT 1 cut(s) 75
AclWI GGATC 1 cut(s) 607
AcoI YGGCCR 2 cut(s) 3, 580
AcsI RAATTY 2 cut(s) 81, 988
AcuI CTGAAG 1 cut(s) 113
AcyI GRCGYC 1 cut(s) 297
AfaI GTAC 2 cut(s) 215, 926
AfiI CCNNNNNNNGG 1 cut(s) 686
AflII CTTAAG 1 cut(s) 350
AflIII ACRYGT 2 cut(s) 253, 888
AgsI TTSAA 1 cut(s) 287
AhdI GACNNNNNGTC 1 cut(s) 826
AjiI CACGTC 1 cut(s) 254
AjnI CCWGG 2 cut(s) 448, 862
AleI CACNNNNGTG 1 cut(s) 542
AluBI AGCT 6 cut(s) 118, 278, 426, 524, 619, 1055
AluI AGCT 6 cut(s) 118, 278, 426, 524, 619, 1055
Alw21I GWGCWC 2 cut(s) 144, 280
Alw26I GTCTC 2 cut(s) 947, 1013
AlwI GGATC 1 cut(s) 607
AoxI GGCC 4 cut(s) 3, 346, 534, 580
ApeKI GCWGC 4 cut(s) 742, 806, 868, 1055
ApoI RAATTY 2 cut(s) 81, 988
AspS9I GGNCC 2 cut(s) 627, 852
AsuC2I CCSGG 1 cut(s) 968
AsuHPI GGTGA 7 cut(s) 406, 446, 464, 556, 605, 680, 974
AsuII TTCGAA 1 cut(s) 198
AvaII GGWCC 2 cut(s) 627, 852
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 131
BanII GRGCYC 2 cut(s) 280, 714
Bbv12I GWGCWC 2 cut(s) 144, 280
BbvI GCAGC 4 cut(s) 729, 818, 855, 1042
BccI CCATC 2 cut(s) 425, 743
BciT130I CCWGG 2 cut(s) 450, 864
BcnI CCSGG 1 cut(s) 968
BcoDI GTCTC 2 cut(s) 947, 1013
BfaI CTAG 1 cut(s) 551
BfmI CTRYAG 1 cut(s) 869
BfrI CTTAAG 1 cut(s) 350
BisI GCNGC 6 cut(s) 580, 743, 807, 869, 939, 1056
BlsI GCNGC 6 cut(s) 581, 744, 808, 870, 940, 1057
Bme1390I CCNGG 3 cut(s) 450, 864, 968
Bme18I GGWCC 2 cut(s) 627, 852
BmeRI GACNNNNNGTC 1 cut(s) 826
BmgBI CACGTC 1 cut(s) 254
BmgT120I GGNCC 2 cut(s) 627, 852
BmiI GGNNCC 3 cut(s) 133, 241, 628
BmrFI CCNGG 3 cut(s) 450, 864, 968
BmsI GCATC 2 cut(s) 961, 1026
Bpu14I TTCGAA 1 cut(s) 198
BpuEI CTTGAG 1 cut(s) 728
BpuMI CCSGG 1 cut(s) 968
BsaBI GATNNNNATC 1 cut(s) 199
BsaHI GRCGYC 1 cut(s) 297
BsaI GGTCTC 1 cut(s) 1013
BsaJI CCNNGG 4 cut(s) 340, 577, 630, 863
BsaWI WCCGGW 1 cut(s) 541
BsaXI ACNNNNNCTCC 2 cut(s) 231, 261
Bsc4I CCNNNNNNNGG 1 cut(s) 686
Bse1I ACTGG 3 cut(s) 572, 641, 670
Bse8I GATNNNNATC 1 cut(s) 199
BseBI CCWGG 2 cut(s) 450, 864
BseDI CCNNGG 4 cut(s) 340, 577, 630, 863
BseGI GGATG 5 cut(s) 436, 597, 657, 754, 976
BseJI GATNNNNATC 1 cut(s) 199
BseLI CCNNNNNNNGG 1 cut(s) 686
BseMII CTCAG 2 cut(s) 51, 293
BseNI ACTGG 3 cut(s) 572, 641, 670
BseRI GAGGAG 1 cut(s) 288
BseXI GCAGC 4 cut(s) 729, 818, 855, 1042
Bsh1236I CGCG 2 cut(s) 218, 579
BshFI GGCC 4 cut(s) 5, 348, 536, 582
BshNI GGYRCC 1 cut(s) 131
BsiHKAI GWGCWC 2 cut(s) 144, 280
BsiSI CCGG 3 cut(s) 542, 746, 968
BslFI GGGAC 1 cut(s) 771
BslI CCNNNNNNNGG 1 cut(s) 686
BsmAI GTCTC 2 cut(s) 947, 1013
BsmBI CGTCTC 1 cut(s) 947
BsmFI GGGAC 1 cut(s) 771
BsnI GGCC 4 cut(s) 5, 348, 536, 582
Bso31I GGTCTC 1 cut(s) 1013
Bsp119I TTCGAA 1 cut(s) 198
Bsp1286I GDGCHC 3 cut(s) 144, 280, 714
Bsp1407I TGTACA 1 cut(s) 924
Bsp143I GATC 4 cut(s) 52, 454, 612, 1002
Bsp19I CCATGG 1 cut(s) 340
BspACI CCGC 5 cut(s) 577, 579, 591, 915, 939
BspANI GGCC 4 cut(s) 5, 348, 536, 582
BspCNI CTCAG 2 cut(s) 52, 292
BspFNI CGCG 2 cut(s) 218, 579
BspLI GGNNCC 3 cut(s) 133, 241, 628
BspMAI CTGCAG 1 cut(s) 873
BspPI GGATC 1 cut(s) 607
BspT104I TTCGAA 1 cut(s) 198
BspT107I GGYRCC 1 cut(s) 131
BspTI CTTAAG 1 cut(s) 350
BspTNI GGTCTC 1 cut(s) 1013
BsrGI TGTACA 1 cut(s) 924
BsrI ACTGG 3 cut(s) 572, 641, 670
BssECI CCNNGG 4 cut(s) 340, 577, 630, 863
BssMI GATC 4 cut(s) 52, 454, 612, 1002
BssNI GRCGYC 1 cut(s) 297
BssT1I CCWWGG 2 cut(s) 340, 630
Bst2UI CCWGG 2 cut(s) 450, 864
Bst4CI ACNGT 2 cut(s) 139, 379
BstACI GRCGYC 1 cut(s) 297
BstAFI CTTAAG 1 cut(s) 350
BstAPI GCANNNNNTGC 1 cut(s) 1036
BstAUI TGTACA 1 cut(s) 924
BstBI TTCGAA 1 cut(s) 198
BstC8I GCNNGC 1 cut(s) 936
BstDEI CTNAG 3 cut(s) 60, 279, 1059
BstDSI CCRYGG 2 cut(s) 340, 577
BstENI CCTNNNNNAGG 1 cut(s) 684
BstF5I GGATG 5 cut(s) 436, 597, 657, 754, 976
BstFNI CGCG 2 cut(s) 218, 579
BstKTI GATC 4 cut(s) 55, 457, 615, 1005
BstMAI GTCTC 2 cut(s) 947, 1013
BstMBI GATC 4 cut(s) 52, 454, 612, 1002
BstMWI GCNNNNNNNGC 3 cut(s) 588, 868, 1036
BstNI CCWGG 2 cut(s) 450, 864
BstNSI RCATGY 2 cut(s) 892, 1034
BstSCI CCNGG 3 cut(s) 448, 862, 966
BstSFI CTRYAG 1 cut(s) 869
BstUI CGCG 2 cut(s) 218, 579
BstV1I GCAGC 4 cut(s) 729, 818, 855, 1042
BstXI CCANNNNNNTGG 2 cut(s) 623, 722
BsuRI GGCC 4 cut(s) 5, 348, 536, 582
BtgI CCRYGG 2 cut(s) 340, 577
BtrI CACGTC 1 cut(s) 254
BtsCI GGATG 5 cut(s) 436, 597, 657, 754, 976
BtsI GCAGTG 2 cut(s) 816, 948
BtsIMutI CAGTG 5 cut(s) 135, 367, 663, 816, 948
Cac8I GCNNGC 1 cut(s) 936
Cfr13I GGNCC 2 cut(s) 627, 852
Cfr42I CCGCGG 1 cut(s) 580
CseI GACGC 2 cut(s) 286, 964
Csp6I GTAC 2 cut(s) 214, 925
CspCI CAANNNNNGTGG 2 cut(s) 718, 753
CviAII CATG 6 cut(s) 341, 478, 818, 889, 905, 1031
CviQI GTAC 2 cut(s) 214, 925
DdeI CTNAG 3 cut(s) 60, 279, 1059
DpnI GATC 4 cut(s) 54, 456, 614, 1004
DpnII GATC 4 cut(s) 52, 454, 612, 1002
DriI GACNNNNNGTC 1 cut(s) 826
EaeI YGGCCR 2 cut(s) 3, 580
Eam1105I GACNNNNNGTC 1 cut(s) 826
Ecl136II GAGCTC 1 cut(s) 278
Eco130I CCWWGG 2 cut(s) 340, 630
Eco24I GRGCYC 2 cut(s) 280, 714
Eco31I GGTCTC 1 cut(s) 1013
Eco47I GGWCC 2 cut(s) 627, 852
Eco53kI GAGCTC 1 cut(s) 278
Eco57I CTGAAG 1 cut(s) 113
EcoICRI GAGCTC 1 cut(s) 278
EcoNI CCTNNNNNAGG 1 cut(s) 684
EcoRII CCWGG 2 cut(s) 448, 862
EcoT14I CCWWGG 2 cut(s) 340, 630
EcoT38I GRGCYC 2 cut(s) 280, 714
ErhI CCWWGG 2 cut(s) 340, 630
Esp3I CGTCTC 1 cut(s) 947
FaeI CATG 6 cut(s) 344, 481, 821, 892, 908, 1034
FaqI GGGAC 1 cut(s) 771
FatI CATG 6 cut(s) 340, 477, 817, 888, 904, 1030
FauI CCCGC 1 cut(s) 908
FblI GTMKAC 1 cut(s) 231
Fnu4HI GCNGC 6 cut(s) 580, 743, 807, 869, 939, 1056
FokI GGATG 5 cut(s) 443, 584, 644, 761, 983
FriOI GRGCYC 2 cut(s) 280, 714
Fsp4HI GCNGC 6 cut(s) 580, 743, 807, 869, 939, 1056
FspBI CTAG 1 cut(s) 551
GluI GCNGC 6 cut(s) 580, 743, 807, 869, 939, 1056
HaeIII GGCC 4 cut(s) 5, 348, 536, 582
HapII CCGG 3 cut(s) 542, 746, 968
HgaI GACGC 2 cut(s) 286, 964
Hin1I GRCGYC 1 cut(s) 297
Hin1II CATG 6 cut(s) 344, 481, 821, 892, 908, 1034
HinfI GANTC 7 cut(s) 195, 200, 224, 357, 571, 784, 979
HpaII CCGG 3 cut(s) 542, 746, 968
HphI GGTGA 7 cut(s) 406, 446, 464, 556, 605, 680, 974
Hpy166II GTNNAC 5 cut(s) 232, 375, 437, 547, 925
Hpy188I TCNGA 1 cut(s) 61
Hpy188III TCNNGA 1 cut(s) 1006
Hpy8I GTNNAC 5 cut(s) 232, 375, 437, 547, 925
HpyAV CCTTC 5 cut(s) 91, 789, 796, 904, 1005
HpyCH4III ACNGT 2 cut(s) 139, 379
HpyCH4IV ACGT 2 cut(s) 75, 253
HpyCH4V TGCA 5 cut(s) 260, 817, 871, 904, 1030
HpyF10VI GCNNNNNNNGC 3 cut(s) 588, 868, 1036
HpyF3I CTNAG 3 cut(s) 60, 279, 1059
HpySE526I ACGT 2 cut(s) 75, 253
Hsp92I GRCGYC 1 cut(s) 297
Hsp92II CATG 6 cut(s) 344, 481, 821, 892, 908, 1034
KspI CCGCGG 1 cut(s) 580
Kzo9I GATC 4 cut(s) 52, 454, 612, 1002
LmnI GCTCC 2 cut(s) 239, 275
Lsp1109I GCAGC 4 cut(s) 729, 818, 855, 1042
LweI GCATC 2 cut(s) 961, 1026
MaeI CTAG 1 cut(s) 551
MaeII ACGT 2 cut(s) 75, 253
MaeIII GTNAC 5 cut(s) 386, 401, 469, 593, 634
MalI GATC 4 cut(s) 54, 456, 614, 1004
MboI GATC 4 cut(s) 52, 454, 612, 1002
MboII GAAGA 2 cut(s) 106, 407
MhlI GDGCHC 3 cut(s) 144, 280, 714
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 81, 173, 267, 287, 672, 720, 839, 988
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 793
MmeI TCCRAC 3 cut(s) 58, 229, 873
MnlI CCTC 4 cut(s) 55, 266, 611, 792
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 207, 290, 351, 645
MslI CAYNNNNRTG 1 cut(s) 542
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 3 cut(s) 579, 591, 1055
MspCI CTTAAG 1 cut(s) 350
MspI CCGG 3 cut(s) 542, 746, 968
MspR9I CCNGG 3 cut(s) 450, 864, 968
MvaI CCWGG 2 cut(s) 450, 864
MvnI CGCG 2 cut(s) 218, 579
MwoI GCNNNNNNNGC 3 cut(s) 588, 868, 1036
NciI CCSGG 1 cut(s) 968
NcoI CCATGG 1 cut(s) 340
NdeII GATC 4 cut(s) 52, 454, 612, 1002
NlaIII CATG 6 cut(s) 344, 481, 821, 892, 908, 1034
NlaIV GGNNCC 3 cut(s) 133, 241, 628
NmuCI GTSAC 3 cut(s) 386, 401, 593
NspI RCATGY 2 cut(s) 892, 1034
NspV TTCGAA 1 cut(s) 198
OliI CACNNNNGTG 1 cut(s) 542
PciI ACATGT 1 cut(s) 888
PfeI GAWTC 6 cut(s) 195, 200, 224, 357, 571, 979
PfoI TCCNGGA 1 cut(s) 966
PkrI GCNGC 6 cut(s) 581, 744, 808, 870, 940, 1057
PleI GAGTC 1 cut(s) 792
PpsI GAGTC 1 cut(s) 792
PscI ACATGT 1 cut(s) 888
Psp124BI GAGCTC 1 cut(s) 280
Psp1406I AACGTT 1 cut(s) 75
Psp6I CCWGG 2 cut(s) 448, 862
PspGI CCWGG 2 cut(s) 448, 862
PspN4I GGNNCC 3 cut(s) 133, 241, 628
PspPI GGNCC 2 cut(s) 627, 852
PstI CTGCAG 1 cut(s) 873
PvuII CAGCTG 1 cut(s) 1055
RsaI GTAC 2 cut(s) 215, 926
RsaNI GTAC 2 cut(s) 214, 925
RseI CAYNNNNRTG 1 cut(s) 542
SacI GAGCTC 1 cut(s) 280
SacII CCGCGG 1 cut(s) 580
SaqAI TTAA 4 cut(s) 207, 290, 351, 645
SatI GCNGC 6 cut(s) 580, 743, 807, 869, 939, 1056
Sau3AI GATC 4 cut(s) 52, 454, 612, 1002
Sau96I GGNCC 2 cut(s) 627, 852
SchI GAGTC 1 cut(s) 793
ScrFI CCNGG 3 cut(s) 450, 864, 968
SduI GDGCHC 3 cut(s) 144, 280, 714
SfaNI GCATC 2 cut(s) 961, 1026
SfcI CTRYAG 1 cut(s) 869
Sfr303I CCGCGG 1 cut(s) 580
SfuI TTCGAA 1 cut(s) 198
SgrBI CCGCGG 1 cut(s) 580
SinI GGWCC 2 cut(s) 627, 852
SmiMI CAYNNNNRTG 1 cut(s) 542
SmlI CTYRAG 2 cut(s) 350, 707
SmoI CTYRAG 2 cut(s) 350, 707
Sse9I AATT 8 cut(s) 81, 173, 267, 287, 672, 720, 839, 988
SsiI CCGC 5 cut(s) 577, 579, 591, 915, 939
SspMI CTAG 1 cut(s) 551
SstI GAGCTC 1 cut(s) 280
StyD4I CCNGG 3 cut(s) 448, 862, 966
StyI CCWWGG 2 cut(s) 340, 630
TaaI ACNGT 2 cut(s) 139, 379
TaiI ACGT 2 cut(s) 78, 256
TaqI TCGA 2 cut(s) 198, 782
TasI AATT 8 cut(s) 81, 173, 267, 287, 672, 720, 839, 988
TatI WGTACW 1 cut(s) 924
TauI GCSGC 2 cut(s) 582, 941
TfiI GAWTC 6 cut(s) 195, 200, 224, 357, 571, 979
Tru1I TTAA 4 cut(s) 207, 290, 351, 645
Tru9I TTAA 4 cut(s) 207, 290, 351, 645
TscAI CASTG 5 cut(s) 142, 367, 670, 816, 948
TseFI GTSAC 3 cut(s) 386, 401, 593
TseI GCWGC 4 cut(s) 742, 806, 868, 1055
Tsp45I GTSAC 3 cut(s) 386, 401, 593
TspDTI ATGAA 2 cut(s) 84, 102
TspGWI ACGGA 4 cut(s) 30, 100, 136, 183
TspRI CASTG 5 cut(s) 142, 367, 670, 816, 948
Vha464I CTTAAG 1 cut(s) 350
VpaK11BI GGWCC 2 cut(s) 627, 852
XagI CCTNNNNNAGG 1 cut(s) 684
XapI RAATTY 2 cut(s) 81, 988
XceI RCATGY 2 cut(s) 892, 1034
XmiI GTMKAC 1 cut(s) 231
XspI CTAG 1 cut(s) 551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.