Rh7BG037900

Converts alpha-aldose to the beta-anomer

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0004802
Physical Location & Seq
Forward (+)
2434339 .. 2437799
3461 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG037900.1

Sequence Viewer

Length: 1071 bp
ATGAATAAGATATCTTTGTATTGGTGTTTTCTTTTCCTGCCATTGATCTTGAACTTTTCTGAGGCAAATGACGAAAAGGTGGGAAATATTTATGAATTGAAGAAGGGAAATTTCTCCGTGAAGCTGACGAATTATGGTGCAACTGTGCTCTCTCTTGTTCTCCCTGATAAGAATGGGAAATTAGATGACATTGTTCTTGGGTTTGAATCCCTCAAAGATTACACTAATGATTCGGTCTACTTTGGGGCCACCGTTGGGCGTGTCGCTAATAGAATTGGTGGAGCTGAATTCACTTTGAATGGTACCCACTATAAGTTGGTTCCTAATGATCACGGAAAGAACACTCTCCATGGTGGCTCTAAAGGATTCAGTGATGTTCTATGGACAGTGAAGCGTCACATTGTAGATAGTCACATAACGTTCACCTATGATAGTCGGGATGGTGAAGAAGGCTTCCCTGGTGATCTTTCGGTCTCAGTAACATACATGTTTATTGAACCACACGCTCTAGCTATTAAAATGGAAGCCAAAGCCCTCACCAAGGCCACACCAGTAAACCTAGCCCACCACACCTACTGGAATCTCCGCGGCCACGCCAGTGGTGACATCCTCTCTCACAAAATCCACATTTTTGGATCCAACATCACCCCAGTAAATGATGAACTCATCCCTACCGGCGACATTGCCCCCGTGAAAGGAACACCCTACGATTTCCTTGAGCCCCGAGAGATCGGTAGCCGGATCAATGAGCTGCCTGATGGTTATGACATCAACTACGTTCTGGACCCTTCCAGCCCTGAGCACTTGAGGAAGGCTGCAGTGCTGCATGACAGTGTTTCTGGGAGAAAATTGGAGCTGTGGACTAACCAGCCAGGGCTGCAATTTTACACTAGTAACATGCTGGATGATGTGAAAGGGAAAGGTGGATTTGTGTATAAAAAGCATGCCGCAGTGTGCTTGGAGACACAGGGTTTCCCAGATTCCGTGAATCATCCAAATTTCCCTTCACAAATTGTGAATCCAGGAGACACTTATCTGCATGCTATGGTGTATAGGTTCACAGCTAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00052 ko01100 ko01110 ko01120 ko01130 map00010 map00052 map01100 map01110 map01120 map01130
Pfam Domains
Protein Families
Aldose_epim

Protein Analysis

356

Amino Acids

39.55

Weight (kDa)

6.13

Isoelectric Point (pI)

31.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldose_epim PF01263 30 - 352 5.1e-96 Aldose 1-epimerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 302
AccB1I GGYRCC 1 cut(s) 302
AccI GTMKAC 1 cut(s) 237
AccII CGCG 1 cut(s) 588
AciI CCGC 3 cut(s) 586, 588, 948
AclI AACGTT 1 cut(s) 419
AclWI GGATC 3 cut(s) 630, 643, 749
AcoI YGGCCR 1 cut(s) 589
AcsI RAATTY 3 cut(s) 109, 287, 997
AfaI GTAC 1 cut(s) 304
AfiI CCNNNNNNNGG 3 cut(s) 255, 541, 695
AflIII ACRYGT 1 cut(s) 486
AgsI TTSAA 5 cut(s) 52, 100, 206, 298, 497
AhlI ACTAGT 1 cut(s) 890
AjnI CCWGG 3 cut(s) 457, 871, 1021
AjuI GAANNNNNNNTTGG 2 cut(s) 988, 1020
AleI CACNNNNGTG 1 cut(s) 597
AluBI AGCT 6 cut(s) 124, 284, 512, 751, 856, 1064
AluI AGCT 6 cut(s) 124, 284, 512, 751, 856, 1064
Alw21I GWGCWC 2 cut(s) 150, 804
Alw26I GTCTC 3 cut(s) 478, 956, 1020
AlwI GGATC 3 cut(s) 630, 643, 749
Ama87I CYCGRG 1 cut(s) 723
AoxI GGCC 3 cut(s) 246, 543, 589
ApeKI GCWGC 4 cut(s) 751, 815, 823, 877
ApoI RAATTY 3 cut(s) 109, 287, 997
Asp718I GGTACC 1 cut(s) 302
AspS9I GGNCC 2 cut(s) 246, 784
AsuHPI GGTGA 6 cut(s) 415, 455, 473, 529, 614, 637
AvaI CYCGRG 1 cut(s) 723
AvaII GGWCC 1 cut(s) 784
BamHI GGATCC 1 cut(s) 635
BanI GGYRCC 1 cut(s) 302
BanII GRGCYC 1 cut(s) 723
Bbv12I GWGCWC 2 cut(s) 150, 804
BbvI GCAGC 4 cut(s) 738, 802, 810, 864
BccI CCATC 2 cut(s) 434, 752
BciT130I CCWGG 3 cut(s) 459, 873, 1023
BclI TGATCA 1 cut(s) 328
BcoDI GTCTC 3 cut(s) 478, 956, 1020
BcuI ACTAGT 1 cut(s) 890
BfaI CTAG 4 cut(s) 509, 560, 891, 1069
BfmI CTRYAG 1 cut(s) 816
BisI GCNGC 6 cut(s) 589, 752, 816, 824, 878, 948
BlsI GCNGC 6 cut(s) 590, 753, 817, 825, 879, 949
Bme1390I CCNGG 3 cut(s) 459, 873, 1023
Bme18I GGWCC 1 cut(s) 784
BmeT110I CYCGRG 1 cut(s) 723
BmgT120I GGNCC 2 cut(s) 246, 784
BmiI GGNNCC 5 cut(s) 247, 304, 321, 637, 786
BmrFI CCNGG 3 cut(s) 459, 873, 1023
BmrI ACTGGG 1 cut(s) 644
BmuI ACTGGG 1 cut(s) 644
Bpu10I CCTNAGC 1 cut(s) 798
BpuEI CTTGAG 2 cut(s) 737, 826
BsaI GGTCTC 1 cut(s) 478
BsaJI CCNNGG 5 cut(s) 349, 457, 540, 586, 872
Bsc4I CCNNNNNNNGG 3 cut(s) 255, 541, 695
Bse118I RCCGGY 1 cut(s) 674
Bse1I ACTGG 4 cut(s) 551, 581, 597, 650
Bse3DI GCAATG 1 cut(s) 681
BseBI CCWGG 3 cut(s) 459, 873, 1023
BseDI CCNNGG 5 cut(s) 349, 457, 540, 586, 872
BseGI GGATG 5 cut(s) 445, 606, 666, 910, 991
BseLI CCNNNNNNNGG 3 cut(s) 255, 541, 695
BseMI GCAATG 1 cut(s) 681
BseMII CTCAG 3 cut(s) 51, 489, 789
BseNI ACTGG 4 cut(s) 551, 581, 597, 650
BseXI GCAGC 4 cut(s) 738, 802, 810, 864
Bsh1236I CGCG 1 cut(s) 588
BshFI GGCC 3 cut(s) 248, 545, 591
BshNI GGYRCC 1 cut(s) 302
BsiHKAI GWGCWC 2 cut(s) 150, 804
BsiHKCI CYCGRG 1 cut(s) 723
BsiSI CCGG 2 cut(s) 675, 739
BslI CCNNNNNNNGG 3 cut(s) 255, 541, 695
BsmAI GTCTC 3 cut(s) 478, 956, 1020
BsnI GGCC 3 cut(s) 248, 545, 591
Bso31I GGTCTC 1 cut(s) 478
BsoBI CYCGRG 1 cut(s) 723
Bsp1286I GDGCHC 3 cut(s) 150, 723, 804
Bsp143I GATC 6 cut(s) 45, 328, 463, 635, 729, 741
Bsp19I CCATGG 1 cut(s) 349
BspACI CCGC 3 cut(s) 586, 588, 948
BspANI GGCC 3 cut(s) 248, 545, 591
BspCNI CTCAG 3 cut(s) 52, 488, 790
BspFNI CGCG 1 cut(s) 588
BspLI GGNNCC 5 cut(s) 247, 304, 321, 637, 786
BspMAI CTGCAG 1 cut(s) 820
BspPI GGATC 3 cut(s) 630, 643, 749
BspT107I GGYRCC 1 cut(s) 302
BspTNI GGTCTC 1 cut(s) 478
BsrDI GCAATG 1 cut(s) 681
BsrFI RCCGGY 1 cut(s) 674
BsrI ACTGG 4 cut(s) 551, 581, 597, 650
BssAI RCCGGY 1 cut(s) 674
BssECI CCNNGG 5 cut(s) 349, 457, 540, 586, 872
BssMI GATC 6 cut(s) 45, 328, 463, 635, 729, 741
BssT1I CCWWGG 2 cut(s) 349, 540
Bst2UI CCWGG 3 cut(s) 459, 873, 1023
Bst4CI ACNGT 4 cut(s) 145, 253, 388, 833
BstC8I GCNNGC 2 cut(s) 945, 1041
BstDEI CTNAG 3 cut(s) 60, 475, 798
BstDSI CCRYGG 2 cut(s) 349, 586
BstENI CCTNNNNNAGG 1 cut(s) 539
BstF5I GGATG 5 cut(s) 445, 606, 666, 910, 991
BstFNI CGCG 1 cut(s) 588
BstKTI GATC 6 cut(s) 48, 331, 466, 638, 732, 744
BstMAI GTCTC 3 cut(s) 478, 956, 1020
BstMBI GATC 6 cut(s) 45, 328, 463, 635, 729, 741
BstMWI GCNNNNNNNGC 1 cut(s) 877
BstNI CCWGG 3 cut(s) 459, 873, 1023
BstNSI RCATGY 4 cut(s) 490, 901, 947, 1043
BstSCI CCNGG 3 cut(s) 457, 871, 1021
BstSFI CTRYAG 1 cut(s) 816
BstUI CGCG 1 cut(s) 588
BstV1I GCAGC 4 cut(s) 738, 802, 810, 864
BstX2I RGATCY 1 cut(s) 635
BstXI CCANNNNNNTGG 2 cut(s) 599, 632
BstYI RGATCY 1 cut(s) 635
BsuRI GGCC 3 cut(s) 248, 545, 591
BtgI CCRYGG 2 cut(s) 349, 586
BtsCI GGATG 5 cut(s) 445, 606, 666, 910, 991
BtsI GCAGTG 2 cut(s) 825, 957
BtsIMutI CAGTG 6 cut(s) 376, 393, 604, 825, 838, 957
Cac8I GCNNGC 2 cut(s) 945, 1041
Cfr10I RCCGGY 1 cut(s) 674
Cfr13I GGNCC 2 cut(s) 246, 784
Cfr42I CCGCGG 1 cut(s) 589
CseI GACGC 1 cut(s) 383
Csp6I GTAC 1 cut(s) 303
CviAII CATG 6 cut(s) 350, 487, 827, 898, 944, 1040
CviQI GTAC 1 cut(s) 303
DdeI CTNAG 3 cut(s) 60, 475, 798
DpnI GATC 6 cut(s) 47, 330, 465, 637, 731, 743
DpnII GATC 6 cut(s) 45, 328, 463, 635, 729, 741
EaeI YGGCCR 1 cut(s) 589
Eco130I CCWWGG 2 cut(s) 349, 540
Eco24I GRGCYC 1 cut(s) 723
Eco31I GGTCTC 1 cut(s) 478
Eco32I GATATC 1 cut(s) 12
Eco47I GGWCC 1 cut(s) 784
Eco88I CYCGRG 1 cut(s) 723
EcoNI CCTNNNNNAGG 1 cut(s) 539
EcoRI GAATTC 1 cut(s) 287
EcoRII CCWGG 3 cut(s) 457, 871, 1021
EcoRV GATATC 1 cut(s) 12
EcoT14I CCWWGG 2 cut(s) 349, 540
EcoT38I GRGCYC 1 cut(s) 723
ErhI CCWWGG 2 cut(s) 349, 540
FaeI CATG 6 cut(s) 353, 490, 830, 901, 947, 1043
FatI CATG 6 cut(s) 349, 486, 826, 897, 943, 1039
FbaI TGATCA 1 cut(s) 328
FblI GTMKAC 1 cut(s) 237
Fnu4HI GCNGC 6 cut(s) 589, 752, 816, 824, 878, 948
FokI GGATG 5 cut(s) 452, 593, 653, 917, 978
FriOI GRGCYC 1 cut(s) 723
Fsp4HI GCNGC 6 cut(s) 589, 752, 816, 824, 878, 948
FspBI CTAG 4 cut(s) 509, 560, 891, 1069
GluI GCNGC 6 cut(s) 589, 752, 816, 824, 878, 948
HaeIII GGCC 3 cut(s) 248, 545, 591
HapII CCGG 2 cut(s) 675, 739
HgaI GACGC 1 cut(s) 383
Hin1II CATG 6 cut(s) 353, 490, 830, 901, 947, 1043
HinfI GANTC 7 cut(s) 206, 230, 366, 580, 980, 988, 1018
HpaII CCGG 2 cut(s) 675, 739
HphI GGTGA 6 cut(s) 415, 455, 473, 529, 614, 637
Hpy166II GTNNAC 5 cut(s) 238, 423, 556, 861, 1059
Hpy188I TCNGA 1 cut(s) 61
Hpy188III TCNNGA 3 cut(s) 49, 437, 782
Hpy8I GTNNAC 5 cut(s) 238, 423, 556, 861, 1059
HpyAV CCTTC 5 cut(s) 97, 443, 798, 805, 1014
HpyCH4III ACNGT 4 cut(s) 145, 253, 388, 833
HpyCH4IV ACGT 2 cut(s) 419, 777
HpyCH4V TGCA 5 cut(s) 140, 818, 826, 880, 1039
HpyF10VI GCNNNNNNNGC 1 cut(s) 877
HpyF3I CTNAG 3 cut(s) 60, 475, 798
HpySE526I ACGT 2 cut(s) 419, 777
Hsp92II CATG 6 cut(s) 353, 490, 830, 901, 947, 1043
KpnI GGTACC 1 cut(s) 306
Ksp22I TGATCA 1 cut(s) 328
KspI CCGCGG 1 cut(s) 589
Kzo9I GATC 6 cut(s) 45, 328, 463, 635, 729, 741
LmnI GCTCC 2 cut(s) 281, 853
Lsp1109I GCAGC 4 cut(s) 738, 802, 810, 864
MaeI CTAG 4 cut(s) 509, 560, 891, 1069
MaeII ACGT 2 cut(s) 419, 777
MaeIII GTNAC 5 cut(s) 395, 410, 478, 602, 893
MalI GATC 6 cut(s) 47, 330, 465, 637, 731, 743
MboI GATC 6 cut(s) 45, 328, 463, 635, 729, 741
MboII GAAGA 2 cut(s) 112, 458
MflI RGATCY 1 cut(s) 635
MhlI GDGCHC 3 cut(s) 150, 723, 804
MmeI TCCRAC 1 cut(s) 663
MnlI CCTC 5 cut(s) 55, 221, 545, 620, 801
MseI TTAA 1 cut(s) 516
MslI CAYNNNNRTG 2 cut(s) 597, 831
MspA1I CMGCKG 1 cut(s) 588
MspI CCGG 2 cut(s) 675, 739
MspR9I CCNGG 3 cut(s) 459, 873, 1023
MvaI CCWGG 3 cut(s) 459, 873, 1023
MvnI CGCG 1 cut(s) 588
MwoI GCNNNNNNNGC 1 cut(s) 877
NcoI CCATGG 1 cut(s) 349
NdeII GATC 6 cut(s) 45, 328, 463, 635, 729, 741
NlaIII CATG 6 cut(s) 353, 490, 830, 901, 947, 1043
NlaIV GGNNCC 5 cut(s) 247, 304, 321, 637, 786
NmuCI GTSAC 3 cut(s) 395, 410, 602
NspI RCATGY 4 cut(s) 490, 901, 947, 1043
OliI CACNNNNGTG 1 cut(s) 597
PaeI GCATGC 2 cut(s) 947, 1043
PciI ACATGT 1 cut(s) 486
PfeI GAWTC 7 cut(s) 206, 230, 366, 580, 980, 988, 1018
PfoI TCCNGGA 1 cut(s) 1021
PkrI GCNGC 6 cut(s) 590, 753, 817, 825, 879, 949
PscI ACATGT 1 cut(s) 486
Psp1406I AACGTT 1 cut(s) 419
Psp6I CCWGG 3 cut(s) 457, 871, 1021
PspGI CCWGG 3 cut(s) 457, 871, 1021
PspN4I GGNNCC 5 cut(s) 247, 304, 321, 637, 786
PspPI GGNCC 2 cut(s) 246, 784
PstI CTGCAG 1 cut(s) 820
PsuI RGATCY 1 cut(s) 635
RsaI GTAC 1 cut(s) 304
RsaNI GTAC 1 cut(s) 303
RseI CAYNNNNRTG 2 cut(s) 597, 831
SacII CCGCGG 1 cut(s) 589
SaqAI TTAA 1 cut(s) 516
SatI GCNGC 6 cut(s) 589, 752, 816, 824, 878, 948
Sau3AI GATC 6 cut(s) 45, 328, 463, 635, 729, 741
Sau96I GGNCC 2 cut(s) 246, 784
ScrFI CCNGG 3 cut(s) 459, 873, 1023
SduI GDGCHC 3 cut(s) 150, 723, 804
SfcI CTRYAG 1 cut(s) 816
Sfr303I CCGCGG 1 cut(s) 589
SgrBI CCGCGG 1 cut(s) 589
SinI GGWCC 1 cut(s) 784
SmiMI CAYNNNNRTG 2 cut(s) 597, 831
SmlI CTYRAG 2 cut(s) 716, 805
SmoI CTYRAG 2 cut(s) 716, 805
SpeI ACTAGT 1 cut(s) 890
SphI GCATGC 2 cut(s) 947, 1043
SsiI CCGC 3 cut(s) 586, 588, 948
SspI AATATT 1 cut(s) 88
SspMI CTAG 4 cut(s) 509, 560, 891, 1069
StyD4I CCNGG 3 cut(s) 457, 871, 1021
StyI CCWWGG 2 cut(s) 349, 540
TaaI ACNGT 4 cut(s) 145, 253, 388, 833
TaiI ACGT 2 cut(s) 422, 780
TaqII GACCGA 2 cut(s) 223, 460
TauI GCSGC 2 cut(s) 591, 950
TfiI GAWTC 7 cut(s) 206, 230, 366, 580, 980, 988, 1018
Tru1I TTAA 1 cut(s) 516
Tru9I TTAA 1 cut(s) 516
TscAI CASTG 6 cut(s) 376, 393, 604, 825, 838, 957
TseFI GTSAC 3 cut(s) 395, 410, 602
TseI GCWGC 4 cut(s) 751, 815, 823, 877
Tsp45I GTSAC 3 cut(s) 395, 410, 602
TspDTI ATGAA 3 cut(s) 17, 108, 675
TspGWI ACGGA 3 cut(s) 106, 348, 973
TspRI CASTG 6 cut(s) 376, 393, 604, 825, 838, 957
VpaK11BI GGWCC 1 cut(s) 784
XagI CCTNNNNNAGG 1 cut(s) 539
XapI RAATTY 3 cut(s) 109, 287, 997
XceI RCATGY 4 cut(s) 490, 901, 947, 1043
XmiI GTMKAC 1 cut(s) 237
XspI CTAG 4 cut(s) 509, 560, 891, 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.