Rorug06G0436600

Converts alpha-aldose to the beta-anomer

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
57078396 .. 57087056
8661 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0436600.1

Sequence Viewer

Length: 1677 bp
ATGGCGGAGGAAGACACGGAGAGTCGGTGTAGCATACCTGCGGGTTTTTCGCCGGCTTTGACCCGAAAGCAGAAACTGAAAGTGAATATCTACAATGAAATTCTGGTCCGGCTTAAGGACTCGGATGTCGCGGAGGCCCAACAGCCCGGTTTCGAAGATGAACTCTGGGCTCATTTCAATCGCCTCCCAACTAGGTATGCTTTGGATGTGAATGTGGAGAGGGCACAAGATGTTCTCATGCATAAAAGACTATTGCATGTGGCACATGACCCTGCCACTAGACCTGCAGTCGAAGTCCGTCTTGTGCAGGTTCATTCTTCTTCTAATTTAAGCTCATCCAGAAAAGAAGATACTCAGTGTTCTGGTTTTGCTGGCAAACAGAGTCATCCACCACCAGCTTTTGGTTTGTCAGAAGACCTTGAACTTGCTCTTGAAGCCAAGAAGTTACAAGTTCAACATGGGAATACCACTGTGAATGCCTTTTCAAGGCCGATGCATGAAATTACAATTTCAACTAATGACAAGCCCAAACTCCTTAGTGAGTTGACATCCTTATTATCTGACATCGGACTGAACATTCAAGAAGCACATGCTTTTTCTACAACAGATGGCTACTCCTTGGATGTCTTTGTCGTTGATGGTTGGGAATGTGAGGAAACTGAACGGCTTAGACAGGCACTGGCAAAAGAAATACTATGGAGTGAGAATCCTTGCTTGGATTATAATGTCATCTCCCCTGTTCTGGGGCAAGACACTGGAATGAAGGTCATTGGTGATCATGTAAGCACATCCAGTGAAGAAAAAGATATCTGGGAAATTGAAGCAAGCCTATTGACATATGAAAGGAAAATTGCTTCTGGATCAAATGGTGATTTATATCAAGGTACTTTCTGTGGTCAAGATGTGGCCATTAAAGTTCTTAGCACTGAGCGCCTAAATGAAACCATGAGGGAGTTTACCCAAGAAGTCTGTATCATGAGAAAAGTTCGGCACAAGAATGTCGTTCAATTCATTGGGGCTTGCACTAAACCTCCTAACCTTTGCATAGTTACTGAATTTTTGTCTGGTGGAAGCATGTACGACTTTCTCCATAAGCAAAAGGGTTCTTTTTCACTTCAGTCCTTGCTCAAAGTTGCAGTTGATATTTCCAGGGGAATGAAATACTTGCACCAAAATAATATAATGCACAGGGACTTGAAAGCTGCTAATCTTTTGATGGATGGAAATGGAGTTGTGAAAGTAGCTGATTTTGGGATTGCTAGAGTACAGGCACAATCTGGTGTTATGACTGCAGAAACTGGCACCTACCGTTGGATGGCTCCAGAGGTCATAGAACATAAACCGTATGATCACAAAGCCGATGTTTTTAGCTTTGGGGTTATTCTGTGGGAGCTTCTTACAGGAAAGCTTCCCTATGAGAACTTAACTCCACTACAAGCAGCACTCGGCGTTGTCAAGAAGGGTCTGAGGCCTACGATTCCAAAGCACACTAACCCCATGCTAGTGGAGTTAATGGAGAGTTGCTGGCAGCAAGATGCATCATTGAGACCTGAGTTCTCAGAGATTGTAAATATGTTGCGACAAATGGCTAGGAGGGTTGCGGATGAAAGGGAGGATCGACGAAAGGGAAAATCAGCAAAAGTAGTACCTACTCTTAGGCATGGCAGTGCCGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

558

Amino Acids

62.53

Weight (kDa)

6.09

Isoelectric Point (pI)

50.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 279 - 526 1.6e-73 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 280 - 524 1.8e-58 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 723
AasI GACNNNNNNGTC 1 cut(s) 125
Acc36I ACCTGC 3 cut(s) 46, 292, 298
AccB1I GGYRCC 1 cut(s) 1301
AccB7I CCANNNNNTGG 1 cut(s) 401
AccII CGCG 1 cut(s) 131
AciI CCGC 4 cut(s) 5, 41, 131, 1601
AclWI GGATC 2 cut(s) 868, 1623
AcoI YGGCCR 1 cut(s) 906
AcsI RAATTY 2 cut(s) 99, 1055
AcuI CTGAAG 1 cut(s) 1100
AfaI GTAC 4 cut(s) 886, 1079, 1266, 1647
AfiI CCNNNNNNNGG 7 cut(s) 115, 401, 486, 742, 743, 1311, 1315
AflII CTTAAG 1 cut(s) 113
AhdI GACNNNNNGTC 1 cut(s) 287
AjnI CCWGG 1 cut(s) 1148
AjuI GAANNNNNNNTTGG 2 cut(s) 698, 730
AluBI AGCT 7 cut(s) 333, 398, 1202, 1244, 1371, 1393, 1408
AluI AGCT 7 cut(s) 333, 398, 1202, 1244, 1371, 1393, 1408
Alw26I GTCTC 1 cut(s) 1540
AlwI GGATC 2 cut(s) 868, 1623
AlwNI CAGNNNCTG 3 cut(s) 76, 679, 1298
AoxI GGCC 4 cut(s) 135, 488, 906, 1469
ApeKI GCWGC 3 cut(s) 1202, 1439, 1528
ApoI RAATTY 2 cut(s) 99, 1055
AspLEI GCGC 1 cut(s) 933
AspS9I GGNCC 2 cut(s) 106, 136
AsuC2I CCSGG 1 cut(s) 147
AsuHPI GGTGA 2 cut(s) 785, 881
AsuII TTCGAA 1 cut(s) 153
AvaII GGWCC 1 cut(s) 106
BaeGI GKGCMC 1 cut(s) 226
BalI TGGCCA 1 cut(s) 908
BanI GGYRCC 1 cut(s) 1301
BanII GRGCYC 1 cut(s) 172
BbsI GAAGAC 2 cut(s) 18, 420
BbvI GCAGC 3 cut(s) 1189, 1451, 1540
BccI CCATC 5 cut(s) 602, 632, 1210, 1214, 1309
BceAI ACGGC 1 cut(s) 680
BciT130I CCWGG 1 cut(s) 1150
BclI TGATCA 2 cut(s) 775, 1348
BcnI CCSGG 1 cut(s) 147
BcoDI GTCTC 1 cut(s) 1540
BfaI CTAG 5 cut(s) 192, 279, 1260, 1502, 1590
BfmI CTRYAG 2 cut(s) 285, 1290
BfoI RGCGCY 1 cut(s) 934
BfrI CTTAAG 1 cut(s) 113
BfuAI ACCTGC 3 cut(s) 46, 292, 298
BisI GCNGC 3 cut(s) 1203, 1440, 1529
BlsI GCNGC 3 cut(s) 1204, 1441, 1530
Bme1390I CCNGG 2 cut(s) 147, 1150
Bme18I GGWCC 1 cut(s) 106
BmeRI GACNNNNNGTC 1 cut(s) 287
BmgT120I GGNCC 2 cut(s) 106, 136
BmiI GGNNCC 2 cut(s) 1303, 1320
BmrFI CCNGG 2 cut(s) 147, 1150
BmsI GCATC 3 cut(s) 483, 1525, 1547
BpiI GAAGAC 2 cut(s) 18, 420
BpmI CTGGAG 1 cut(s) 1305
Bpu14I TTCGAA 1 cut(s) 153
BpuMI CCSGG 1 cut(s) 147
BsaBI GATNNNNATC 1 cut(s) 876
BsaI GGTCTC 1 cut(s) 1540
BsaJI CCNNGG 2 cut(s) 618, 1149
BsaXI ACNNNNNCTCC 4 cut(s) 11, 41, 1015, 1045
Bsc4I CCNNNNNNNGG 7 cut(s) 115, 401, 486, 742, 743, 1311, 1315
Bse118I RCCGGY 1 cut(s) 52
Bse1I ACTGG 4 cut(s) 684, 760, 792, 1303
Bse8I GATNNNNATC 1 cut(s) 876
BseBI CCWGG 1 cut(s) 1150
BseDI CCNNGG 2 cut(s) 618, 1149
BseJI GATNNNNATC 1 cut(s) 876
BseLI CCNNNNNNNGG 7 cut(s) 115, 401, 486, 742, 743, 1311, 1315
BseMII CTCAG 5 cut(s) 368, 918, 1457, 1542, 1572
BseNI ACTGG 4 cut(s) 684, 760, 792, 1303
BseSI GKGCMC 1 cut(s) 226
BseXI GCAGC 3 cut(s) 1189, 1451, 1540
BsgI GTGCAG 1 cut(s) 326
Bsh1236I CGCG 1 cut(s) 131
BshFI GGCC 4 cut(s) 137, 490, 908, 1471
BshNI GGYRCC 1 cut(s) 1301
BsiSI CCGG 3 cut(s) 53, 109, 147
BslFI GGGAC 1 cut(s) 1205
BslI CCNNNNNNNGG 7 cut(s) 115, 401, 486, 742, 743, 1311, 1315
BsmAI GTCTC 1 cut(s) 1540
BsmFI GGGAC 1 cut(s) 1205
BsmI GAATGC 1 cut(s) 481
BsnI GGCC 4 cut(s) 137, 490, 908, 1471
Bso31I GGTCTC 1 cut(s) 1540
Bsp119I TTCGAA 1 cut(s) 153
Bsp1286I GDGCHC 2 cut(s) 172, 226
Bsp143I GATC 4 cut(s) 775, 860, 1348, 1615
BspACI CCGC 4 cut(s) 5, 41, 131, 1601
BspANI GGCC 4 cut(s) 137, 490, 908, 1471
BspCNI CTCAG 5 cut(s) 367, 919, 1458, 1543, 1571
BspFNI CGCG 1 cut(s) 131
BspHI TCATGA 1 cut(s) 975
BspLI GGNNCC 2 cut(s) 1303, 1320
BspMAI CTGCAG 2 cut(s) 289, 1294
BspMI ACCTGC 3 cut(s) 46, 292, 298
BspPI GGATC 2 cut(s) 868, 1623
BspT104I TTCGAA 1 cut(s) 153
BspT107I GGYRCC 1 cut(s) 1301
BspTI CTTAAG 1 cut(s) 113
BspTNI GGTCTC 1 cut(s) 1540
BsrFI RCCGGY 1 cut(s) 52
BsrI ACTGG 4 cut(s) 684, 760, 792, 1303
BssAI RCCGGY 1 cut(s) 52
BssECI CCNNGG 2 cut(s) 618, 1149
BssMI GATC 4 cut(s) 775, 860, 1348, 1615
BssT1I CCWWGG 1 cut(s) 618
Bst2UI CCWGG 1 cut(s) 1150
Bst4CI ACNGT 3 cut(s) 472, 1310, 1344
BstAFI CTTAAG 1 cut(s) 113
BstBI TTCGAA 1 cut(s) 153
BstC8I GCNNGC 5 cut(s) 54, 373, 826, 1021, 1526
BstDEI CTNAG 9 cut(s) 354, 536, 668, 920, 927, 1466, 1551, 1558, 1655
BstENI CCTNNNNNAGG 1 cut(s) 484
BstFNI CGCG 1 cut(s) 131
BstH2I RGCGCY 1 cut(s) 934
BstHHI GCGC 1 cut(s) 933
BstKTI GATC 4 cut(s) 778, 863, 1351, 1618
BstMAI GTCTC 1 cut(s) 1540
BstMBI GATC 4 cut(s) 775, 860, 1348, 1615
BstMWI GCNNNNNNNGC 2 cut(s) 434, 930
BstNI CCWGG 1 cut(s) 1150
BstNSI RCATGY 3 cut(s) 260, 593, 1078
BstSCI CCNGG 2 cut(s) 145, 1148
BstSFI CTRYAG 2 cut(s) 285, 1290
BstSLI GKGCMC 1 cut(s) 226
BstUI CGCG 1 cut(s) 131
BstV1I GCAGC 3 cut(s) 1189, 1451, 1540
BstV2I GAAGAC 2 cut(s) 18, 420
BstXI CCANNNNNNTGG 1 cut(s) 1504
BsuRI GGCC 4 cut(s) 137, 490, 908, 1471
BtsI GCAGTG 1 cut(s) 1672
BtsIMutI CAGTG 7 cut(s) 362, 468, 677, 753, 799, 924, 1672
BveI ACCTGC 3 cut(s) 46, 292, 298
Cac8I GCNNGC 5 cut(s) 54, 373, 826, 1021, 1526
CaiI CAGNNNCTG 3 cut(s) 76, 679, 1298
CciI TCATGA 1 cut(s) 975
CfoI GCGC 1 cut(s) 933
Cfr10I RCCGGY 1 cut(s) 52
Cfr13I GGNCC 2 cut(s) 106, 136
Csp6I GTAC 4 cut(s) 885, 1078, 1265, 1646
CviQI GTAC 4 cut(s) 885, 1078, 1265, 1646
DdeI CTNAG 9 cut(s) 354, 536, 668, 920, 927, 1466, 1551, 1558, 1655
DpnI GATC 4 cut(s) 777, 862, 1350, 1617
DpnII GATC 4 cut(s) 775, 860, 1348, 1615
DrdI GACNNNNNNGTC 1 cut(s) 125
DriI GACNNNNNGTC 1 cut(s) 287
DseDI GACNNNNNNGTC 1 cut(s) 125
EaeI YGGCCR 1 cut(s) 906
Eam1105I GACNNNNNGTC 1 cut(s) 287
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 618
Eco147I AGGCCT 1 cut(s) 1471
Eco24I GRGCYC 1 cut(s) 172
Eco31I GGTCTC 1 cut(s) 1540
Eco32I GATATC 1 cut(s) 808
Eco47I GGWCC 1 cut(s) 106
Eco57I CTGAAG 1 cut(s) 1100
EcoNI CCTNNNNNAGG 1 cut(s) 484
EcoRII CCWGG 1 cut(s) 1148
EcoRV GATATC 1 cut(s) 808
EcoT14I CCWWGG 1 cut(s) 618
EcoT22I ATGCAT 3 cut(s) 243, 498, 1540
EcoT38I GRGCYC 1 cut(s) 172
ErhI CCWWGG 1 cut(s) 618
FalI AAGNNNNNCTT 2 cut(s) 285, 317
FaqI GGGAC 1 cut(s) 1205
FauI CCCGC 1 cut(s) 34
FauNDI CATATG 1 cut(s) 838
FbaI TGATCA 2 cut(s) 775, 1348
Fnu4HI GCNGC 3 cut(s) 1203, 1440, 1529
FriOI GRGCYC 1 cut(s) 172
Fsp4HI GCNGC 3 cut(s) 1203, 1440, 1529
FspBI CTAG 5 cut(s) 192, 279, 1260, 1502, 1590
GlaI GCGC 1 cut(s) 932
GluI GCNGC 3 cut(s) 1203, 1440, 1529
GsuI CTGGAG 1 cut(s) 1305
HaeII RGCGCY 1 cut(s) 934
HaeIII GGCC 4 cut(s) 137, 490, 908, 1471
HapII CCGG 3 cut(s) 53, 109, 147
HhaI GCGC 1 cut(s) 933
Hin6I GCGC 1 cut(s) 931
HinP1I GCGC 1 cut(s) 931
HincII GTYRAC 1 cut(s) 546
HindII GTYRAC 1 cut(s) 546
HindIII AAGCTT 1 cut(s) 1406
HinfI GANTC 5 cut(s) 22, 119, 382, 706, 1477
HpaII CCGG 3 cut(s) 53, 109, 147
HphI GGTGA 2 cut(s) 785, 881
Hpy166II GTNNAC 2 cut(s) 546, 957
Hpy188I TCNGA 6 cut(s) 124, 412, 562, 569, 1467, 1561
Hpy188III TCNNGA 8 cut(s) 339, 431, 581, 858, 899, 976, 1322, 1456
Hpy8I GTNNAC 2 cut(s) 546, 957
Hpy99I CGWCG 1 cut(s) 1623
HpyAV CCTTC 2 cut(s) 757, 1453
HpyCH4III ACNGT 3 cut(s) 472, 1310, 1344
HpyF10VI GCNNNNNNNGC 2 cut(s) 434, 930
HpyF3I CTNAG 9 cut(s) 354, 536, 668, 920, 927, 1466, 1551, 1558, 1655
HspAI GCGC 1 cut(s) 931
KroI GCCGGC 1 cut(s) 52
KroNI GCCGGC 1 cut(s) 54
Ksp22I TGATCA 2 cut(s) 775, 1348
Kzo9I GATC 4 cut(s) 775, 860, 1348, 1615
LmnI GCTCC 2 cut(s) 1324, 1390
Lsp1109I GCAGC 3 cut(s) 1189, 1451, 1540
LweI GCATC 3 cut(s) 483, 1525, 1547
MaeI CTAG 5 cut(s) 192, 279, 1260, 1502, 1590
MaeIII GTNAC 2 cut(s) 444, 1048
MalI GATC 4 cut(s) 777, 862, 1350, 1617
MboI GATC 4 cut(s) 775, 860, 1348, 1615
MboII GAAGA 7 cut(s) 23, 167, 309, 312, 359, 425, 809
MhlI GDGCHC 2 cut(s) 172, 226
MlsI TGGCCA 1 cut(s) 908
MluCI AATT 8 cut(s) 99, 325, 501, 507, 816, 849, 1007, 1055
MluNI TGGCCA 1 cut(s) 908
MlyI GAGTC 3 cut(s) 31, 113, 391
MmeI TCCRAC 1 cut(s) 1292
Mox20I TGGCCA 1 cut(s) 908
Mph1103I ATGCAT 3 cut(s) 243, 498, 1540
MroNI GCCGGC 1 cut(s) 52
MscI TGGCCA 1 cut(s) 908
MseI TTAA 5 cut(s) 114, 329, 912, 1424, 1511
MslI CAYNNNNRTG 4 cut(s) 758, 996, 1502, 1665
Msp20I TGGCCA 1 cut(s) 908
MspCI CTTAAG 1 cut(s) 113
MspI CCGG 3 cut(s) 53, 109, 147
MspR9I CCNGG 2 cut(s) 147, 1150
Mva1269I GAATGC 1 cut(s) 481
MvaI CCWGG 1 cut(s) 1150
MvnI CGCG 1 cut(s) 131
MwoI GCNNNNNNNGC 2 cut(s) 434, 930
NaeI GCCGGC 1 cut(s) 54
NciI CCSGG 1 cut(s) 147
NdeI CATATG 1 cut(s) 838
NdeII GATC 4 cut(s) 775, 860, 1348, 1615
NgoMIV GCCGGC 1 cut(s) 52
NlaIV GGNNCC 2 cut(s) 1303, 1320
NmeAIII GCCGAG 1 cut(s) 1425
NsiI ATGCAT 3 cut(s) 243, 498, 1540
NspI RCATGY 3 cut(s) 260, 593, 1078
NspV TTCGAA 1 cut(s) 153
PagI TCATGA 1 cut(s) 975
PceI AGGCCT 1 cut(s) 1471
PctI GAATGC 1 cut(s) 481
PdiI GCCGGC 1 cut(s) 54
PfeI GAWTC 2 cut(s) 706, 1477
PflMI CCANNNNNTGG 1 cut(s) 401
PkrI GCNGC 3 cut(s) 1204, 1441, 1530
PleI GAGTC 3 cut(s) 30, 113, 390
PpsI GAGTC 3 cut(s) 30, 113, 390
PsiI TTATAA 1 cut(s) 723
Psp6I CCWGG 1 cut(s) 1148
PspGI CCWGG 1 cut(s) 1148
PspN4I GGNNCC 2 cut(s) 1303, 1320
PspPI GGNCC 2 cut(s) 106, 136
PstI CTGCAG 2 cut(s) 289, 1294
PstNI CAGNNNCTG 3 cut(s) 76, 679, 1298
RsaI GTAC 4 cut(s) 886, 1079, 1266, 1647
RsaNI GTAC 4 cut(s) 885, 1078, 1265, 1646
RseI CAYNNNNRTG 4 cut(s) 758, 996, 1502, 1665
SaqAI TTAA 5 cut(s) 114, 329, 912, 1424, 1511
SatI GCNGC 3 cut(s) 1203, 1440, 1529
Sau3AI GATC 4 cut(s) 775, 860, 1348, 1615
Sau96I GGNCC 2 cut(s) 106, 136
SchI GAGTC 3 cut(s) 31, 113, 391
ScrFI CCNGG 2 cut(s) 147, 1150
SduI GDGCHC 2 cut(s) 172, 226
SfaNI GCATC 3 cut(s) 483, 1525, 1547
SfcI CTRYAG 2 cut(s) 285, 1290
SfuI TTCGAA 1 cut(s) 153
SinI GGWCC 1 cut(s) 106
SmiMI CAYNNNNRTG 4 cut(s) 758, 996, 1502, 1665
SmlI CTYRAG 1 cut(s) 113
SmoI CTYRAG 1 cut(s) 113
Sse9I AATT 8 cut(s) 99, 325, 501, 507, 816, 849, 1007, 1055
SseBI AGGCCT 1 cut(s) 1471
SsiI CCGC 4 cut(s) 5, 41, 131, 1601
SspMI CTAG 5 cut(s) 192, 279, 1260, 1502, 1590
StuI AGGCCT 1 cut(s) 1471
StyD4I CCNGG 2 cut(s) 145, 1148
StyI CCWWGG 1 cut(s) 618
TaaI ACNGT 3 cut(s) 472, 1310, 1344
TaqI TCGA 3 cut(s) 153, 291, 1618
TasI AATT 8 cut(s) 99, 325, 501, 507, 816, 849, 1007, 1055
TatI WGTACW 1 cut(s) 1264
TfiI GAWTC 2 cut(s) 706, 1477
Tru1I TTAA 5 cut(s) 114, 329, 912, 1424, 1511
Tru9I TTAA 5 cut(s) 114, 329, 912, 1424, 1511
TscAI CASTG 7 cut(s) 362, 475, 684, 760, 799, 931, 1672
TseI GCWGC 3 cut(s) 1202, 1439, 1528
TspGWI ACGGA 2 cut(s) 32, 287
TspRI CASTG 7 cut(s) 362, 475, 684, 760, 799, 931, 1672
Van91I CCANNNNNTGG 1 cut(s) 401
Vha464I CTTAAG 1 cut(s) 113
VpaK11BI GGWCC 1 cut(s) 106
XagI CCTNNNNNAGG 1 cut(s) 484
XapI RAATTY 2 cut(s) 99, 1055
XceI RCATGY 3 cut(s) 260, 593, 1078
XspI CTAG 5 cut(s) 192, 279, 1260, 1502, 1590
Zsp2I ATGCAT 3 cut(s) 243, 498, 1540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.