E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32740 AT1G32740 AT1G32740 AT1G32740 |
| fragaria_vesca | FvH4_3g23840 FvH4_3g23840 FvH4_3g23840 FvH4_5g16050 FvH4_5g20850 FvH4_5g20850 |
| malus_domestica | MD06G1043600.v1.1 |
| prunus_persica | Prupe.2G192200_v2.0.a1 Prupe.5G050300_v2.0.a1 Prupe.5G050300_v2.0.a1 Prupe.5G050300_v2.0.a1 Prupe.5G050300_v2.0.a1 Prupe.5G050300_v2.0.a1 Prupe.6G165200_v2.0.a1 Prupe.7G181900_v2.0.a1 Prupe.8G197800_v2.0.a1 |
| pyrus_communis | pycom06g03650 |
| rosa_chinensis | RchiOBHm_Chr7g0207871 |
| rosa_laevigata | RLG00000003280 |
| rosa_multiflora | Rmu_ssc0000451.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00251090 |
| rosa_rugosa | Rorug07G0099900 Rorug07G0100000 |
| rosa_samantha | Rh7AG233200 Rh7BG228800 Rh7CG248500 Rh7DG239200 |
| rosa_wichuraiana | Rw7G020020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 173 |
| AfaI | GTAC | 3 cut(s) | 20, 98, 159 |
| AgsI | TTSAA | 3 cut(s) | 11, 124, 215 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 20, 52 |
| AluBI | AGCT | 2 cut(s) | 14, 187 |
| AluI | AGCT | 2 cut(s) | 14, 187 |
| AspLEI | GCGC | 1 cut(s) | 85 |
| BclI | TGATCA | 1 cut(s) | 103 |
| BfaI | CTAG | 1 cut(s) | 134 |
| BmcAI | AGTACT | 1 cut(s) | 159 |
| BseMII | CTCAG | 1 cut(s) | 29 |
| Bsp143I | GATC | 1 cut(s) | 103 |
| BspCNI | CTCAG | 1 cut(s) | 28 |
| BssMI | GATC | 1 cut(s) | 103 |
| Bst6I | CTCTTC | 1 cut(s) | 174 |
| BstC8I | GCNNGC | 1 cut(s) | 150 |
| BstDEI | CTNAG | 1 cut(s) | 15 |
| BstHHI | GCGC | 1 cut(s) | 85 |
| BstKTI | GATC | 1 cut(s) | 106 |
| BstMBI | GATC | 1 cut(s) | 103 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 193 |
| BstNSI | RCATGY | 1 cut(s) | 118 |
| BtsIMutI | CAGTG | 1 cut(s) | 197 |
| Cac8I | GCNNGC | 1 cut(s) | 150 |
| CfoI | GCGC | 1 cut(s) | 85 |
| Csp6I | GTAC | 3 cut(s) | 19, 97, 158 |
| CviAII | CATG | 2 cut(s) | 65, 115 |
| CviJI | RGCY | 2 cut(s) | 14, 187 |
| CviKI_1 | RGCY | 2 cut(s) | 14, 187 |
| CviQI | GTAC | 3 cut(s) | 19, 97, 158 |
| DdeI | CTNAG | 1 cut(s) | 15 |
| DpnI | GATC | 1 cut(s) | 105 |
| DpnII | GATC | 1 cut(s) | 103 |
| Eam1104I | CTCTTC | 1 cut(s) | 174 |
| EarI | CTCTTC | 1 cut(s) | 174 |
| Eco57I | CTGAAG | 1 cut(s) | 173 |
| FaeI | CATG | 2 cut(s) | 68, 118 |
| FaiI | YATR | 2 cut(s) | 66, 116 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 171, 203 |
| FatI | CATG | 2 cut(s) | 64, 114 |
| FbaI | TGATCA | 1 cut(s) | 103 |
| FspBI | CTAG | 1 cut(s) | 134 |
| GlaI | GCGC | 1 cut(s) | 84 |
| HhaI | GCGC | 1 cut(s) | 85 |
| Hin1II | CATG | 2 cut(s) | 68, 118 |
| Hin6I | GCGC | 1 cut(s) | 83 |
| HinP1I | GCGC | 1 cut(s) | 83 |
| HindIII | AAGCTT | 1 cut(s) | 185 |
| HpyAV | CCTTC | 2 cut(s) | 33, 53 |
| HpyCH4V | TGCA | 1 cut(s) | 152 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 193 |
| HpyF3I | CTNAG | 1 cut(s) | 15 |
| Hsp92II | CATG | 2 cut(s) | 68, 118 |
| HspAI | GCGC | 1 cut(s) | 83 |
| Ksp22I | TGATCA | 1 cut(s) | 103 |
| Kzo9I | GATC | 1 cut(s) | 103 |
| MaeI | CTAG | 1 cut(s) | 134 |
| MalI | GATC | 1 cut(s) | 105 |
| MboI | GATC | 1 cut(s) | 103 |
| MboII | GAAGA | 1 cut(s) | 191 |
| MluCI | AATT | 1 cut(s) | 142 |
| MnlI | CCTC | 2 cut(s) | 131, 169 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 193 |
| NdeII | GATC | 1 cut(s) | 103 |
| NlaIII | CATG | 2 cut(s) | 68, 118 |
| NspI | RCATGY | 1 cut(s) | 118 |
| RsaI | GTAC | 3 cut(s) | 20, 98, 159 |
| RsaNI | GTAC | 3 cut(s) | 19, 97, 158 |
| Sau3AI | GATC | 1 cut(s) | 103 |
| ScaI | AGTACT | 1 cut(s) | 159 |
| SetI | ASST | 4 cut(s) | 16, 102, 142, 189 |
| Sse9I | AATT | 1 cut(s) | 142 |
| SspI | AATATT | 1 cut(s) | 31 |
| SspMI | CTAG | 1 cut(s) | 134 |
| TasI | AATT | 1 cut(s) | 142 |
| TatI | WGTACW | 1 cut(s) | 157 |
| TscAI | CASTG | 1 cut(s) | 204 |
| TspRI | CASTG | 1 cut(s) | 204 |
| XceI | RCATGY | 1 cut(s) | 118 |
| XspI | CTAG | 1 cut(s) | 134 |
| ZrmI | AGTACT | 1 cut(s) | 159 |