FvH4_5g17310

May act as a component of the auxin efflux carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0002064
Physical Location & Seq
Forward (+)
9889544 .. 9893867
4324 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g17310.t1

Sequence Viewer

Length: 1863 bp
ATGATCACATTATCAGACTTTTACCACGTCATGACGGCGGTGGTGCCTCTGTACGTGGCCATGGTCTTGGCCTACGGCTCCGTCAAGTGGTGGAAGATCTTCACACCCGACCAGTGCTCAGGCATCAACCGCTTCGTCGCCCTCTTCGCCGTTCCCTTACTCTCCTTCCACTTCATCTCCTTAAACAACCCTTACACCATGAACATCCGCTTCCTCGCCGCCGACACTCTCCAGAAGCTCATTGTCCTCGCCGTCCTCGCCGTCTGGTCCAAAGTCAGCAAGCGCGGCTGCCTCGAGTGGACCATCACCCTCTTCTCCGTCTCCACTCTCCCCAACACCCTCGTCATGGGAATCCCTCTCCTCAAAGGAATGTACGGCGACTTCTCCGGTAGCCTCATGGTCCAAATCGTCGTCCTCCAGTGCATTATCTGGTACACATTGATGCTCTTCATGTTCGAATACCGCGGCGCAAGACTCCTCATCTCCGAGCAGTTCCCGGACACCGCAGGCTCCATCGTCTCGATCCACGTCGACTCGGATATCATGTCCTTGGACGGCAGGCAACCTCTCGAAACAGAAGCCGAGATCAAAGAAGACGGCAAGCTCCACGTCACCGTTCGGAAATCCAACGCCTCCAGGTCGGACATTTACTCGAGAAGGTCCCATTCTCAGGGCCTATCCTCCAATACTCCCCGCCCTTCCAATCTCACCAATGCCGAGATTTACTCCCTCCAGTCTTCTAGAAACCCTACTCCTAGAGGCTCCAGCTTCAACCACACCGACTTTTACTCCATGATGGCCGCCGGCCGGAACTCCAACTTCGGCTCCTCCGACGTCTTCGGCGGGCCATTGACCGCGTCGAGAGGCCCGACGCCGCGTCCGTCGAACTACGAGGACGACGGAGGCGCCGCGGTAGGAGCTGCTGCAGCTGGGAGTAACAAGCCGAGGTTTCATTACCAAGGAGGCGGGAACAATACAACCGCGCATTACCCGGCGCCAAATCCGGGAATGTTCTCGCCGACCACGGCTGCTTCTAAGAACGTTGTCGCTCCGAAGAGGCCTAATGGAAATGGGCCTAATGGGCCGGCTCAGGACGGCGGGAAAGATCTTCATATGTTTGTGTGGAGCTCCAGTGCTTCTCCTGTTTCTGATGTGTTTGGAAGTAATGAATATGGCGCTACCGGCCATGATCAGAAAGAAGTCAAGTTGGCTGTTTCTCCCGGGAAAGTGGAGGGTAGAAGAGAGAACCAAGAAGAGTACATGGTGGAGAGAGACGAGTTCAGCTTTGGGAACAGAGTGGTGGATCAGATGAACATGAACGAAGGTGAGAAAGGGGATTTGAACAAGGCCAAAGTGATGCCTCCGACGAGTGTGATGACGAGGCTGATTCTCATCATGGTCTGGAGAAAATTGATCAGAAACCCAAACACTTACTCAAGCTTGATCGGCCTCACTTGGTCTCTCGTATCCTACAGGTGGCATTTACAAATGCCAGCCATCATAGCAAAGTCGATAGCCATACTATCAGACGCAGGGCTTGGGATGGCTATGTTCAGTCTTGGTCTGTTTATGGCTTTACAACCAAGGATCATAGCATGTGGAAATTCCATTGCAGCTTTTACTATGGCTGTGAGATTCCTTACAGGCCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGCCTTAGGGGCACTCTCTTGCATGTTGCCATTGTCCAGGCAGCTCTACCCCAAGGAATTGTCCCCTTTGTCTTTGCCAAGGAATACAACGTACACCCTGATATTCTCAGCACGGGAGTTATATTCGGCATGTTGATCGCGTTGCCCATTACACTTGTCTACTACATTTTGCTGGGGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005911 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009314 GO:0009416 GO:0009505 GO:0009506 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009914 GO:0009921 GO:0009925 GO:0009926 GO:0009965 GO:0009966 GO:0009987 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010229 GO:0010252 GO:0010315 GO:0010329 GO:0010338 GO:0010358 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0016021 GO:0016323 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0023052 GO:0030054 GO:0030312 GO:0031224 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045177 GO:0045178 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048532 GO:0048583 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048830 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0080161 GO:0090567 GO:0090698 GO:0098590 GO:0098796 GO:0098797 GO:0099402 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mem_trans

Protein Analysis

621

Amino Acids

67.54

Weight (kDa)

9.1

Isoelectric Point (pI)

35.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mem_trans PF03547 9 - 615 1.1e-129 Membrane transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 837
AccB1I GGYRCC 3 cut(s) 43, 905, 994
AccI GTMKAC 2 cut(s) 531, 1839
AccII CGCG 7 cut(s) 285, 465, 857, 877, 911, 983, 1820
AclI AACGTT 1 cut(s) 1041
AclWI GGATC 3 cut(s) 517, 1311, 1595
AcoI YGGCCR 4 cut(s) 57, 798, 805, 1183
AcsI RAATTY 1 cut(s) 1603
AcyI GRCGYC 4 cut(s) 834, 872, 906, 995
AfaI GTAC 5 cut(s) 53, 374, 434, 1259, 1773
AfiI CCNNNNNNNGG 6 cut(s) 87, 346, 670, 807, 1004, 1476
AgsI TTSAA 2 cut(s) 772, 1342
AhdI GACNNNNNGTC 1 cut(s) 876
AjiI CACGTC 3 cut(s) 28, 529, 610
AjnI CCWGG 2 cut(s) 635, 1716
Alw21I GWGCWC 2 cut(s) 119, 1130
Alw26I GTCTC 4 cut(s) 325, 523, 1266, 1464
AlwI GGATC 3 cut(s) 517, 1311, 1595
Ama87I CYCGRG 3 cut(s) 293, 652, 1220
ApeKI GCWGC 9 cut(s) 288, 920, 923, 926, 1028, 1613, 1661, 1664, 1721
ApoI RAATTY 1 cut(s) 1603
Asp700I GAANNNNTTC 1 cut(s) 98
AspLEI GCGC 6 cut(s) 285, 470, 908, 985, 997, 1178
AsuC2I CCSGG 5 cut(s) 497, 992, 1005, 1221, 1222
AsuHPI GGTGA 4 cut(s) 298, 604, 700, 1337
AsuII TTCGAA 1 cut(s) 456
AvaI CYCGRG 3 cut(s) 293, 652, 1220
AvaII GGWCC 4 cut(s) 267, 300, 400, 660
AxyI CCTNAGG 1 cut(s) 1685
BaeGI GKGCMC 1 cut(s) 1694
BalI TGGCCA 1 cut(s) 59
BanI GGYRCC 3 cut(s) 43, 905, 994
BanII GRGCYC 1 cut(s) 1130
BarI GAAGNNNNNNTAC 2 cut(s) 365, 397
BbsI GAAGAC 3 cut(s) 600, 729, 829
Bbv12I GWGCWC 2 cut(s) 119, 1130
BbvI GCAGC 9 cut(s) 275, 907, 910, 938, 1015, 1625, 1651, 1673, 1733
BccI CCATC 5 cut(s) 311, 521, 790, 1505, 1537
BcgI CGANNNNNNTGC 2 cut(s) 1798, 1832
BciT130I CCWGG 2 cut(s) 637, 1718
BciVI GTATCC 1 cut(s) 1477
BclI TGATCA 3 cut(s) 3, 1189, 1413
BcnI CCSGG 5 cut(s) 497, 992, 1005, 1221, 1222
BcoDI GTCTC 4 cut(s) 325, 523, 1266, 1464
BfaI CTAG 2 cut(s) 741, 756
BfmI CTRYAG 2 cut(s) 924, 1471
BfoI RGCGCY 3 cut(s) 909, 998, 1179
BfuI GTATCC 1 cut(s) 1477
BglI GCCNNNNNGGC 2 cut(s) 1081, 1689
BglII AGATCT 2 cut(s) 96, 1105
Bme1390I CCNGG 7 cut(s) 497, 637, 992, 1005, 1221, 1222, 1718
Bme18I GGWCC 4 cut(s) 267, 300, 400, 660
BmeRI GACNNNNNGTC 1 cut(s) 876
BmeT110I CYCGRG 3 cut(s) 293, 652, 1220
BmgBI CACGTC 3 cut(s) 28, 529, 610
BmiI GGNNCC 8 cut(s) 45, 79, 511, 662, 763, 826, 907, 996
BmrFI CCNGG 7 cut(s) 497, 637, 992, 1005, 1221, 1222, 1718
BmsI GCATC 3 cut(s) 132, 432, 1347
BpiI GAAGAC 3 cut(s) 600, 729, 829
BplI GAGNNNNNCTC 2 cut(s) 710, 742
BpmI CTGGAG 7 cut(s) 215, 401, 619, 716, 748, 1114, 1423
Bpu10I CCTNAGC 2 cut(s) 118, 1089
Bpu14I TTCGAA 1 cut(s) 456
BpuEI CTTGAG 1 cut(s) 1420
BpuMI CCSGG 5 cut(s) 497, 992, 1005, 1221, 1222
BsaAI YACGTR 1 cut(s) 55
BsaBI GATNNNNATC 1 cut(s) 1391
BsaHI GRCGYC 4 cut(s) 834, 872, 906, 995
BsaI GGTCTC 1 cut(s) 1464
BsaWI WCCGGW 1 cut(s) 386
BsaXI ACNNNNNCTCC 8 cut(s) 161, 191, 773, 803, 809, 839, 1117, 1147
Bsc4I CCNNNNNNNGG 6 cut(s) 87, 346, 670, 807, 1004, 1476
Bse118I RCCGGY 3 cut(s) 803, 1084, 1181
Bse1I ACTGG 4 cut(s) 112, 418, 733, 1131
Bse21I CCTNAGG 1 cut(s) 1685
Bse3DI GCAATG 2 cut(s) 1608, 1671
Bse8I GATNNNNATC 1 cut(s) 1391
BseBI CCWGG 2 cut(s) 637, 1718
BseGI GGATG 2 cut(s) 204, 1548
BseJI GATNNNNATC 1 cut(s) 1391
BseLI CCNNNNNNNGG 6 cut(s) 87, 346, 670, 807, 1004, 1476
BseMI GCAATG 2 cut(s) 1608, 1671
BseMII CTCAG 4 cut(s) 132, 683, 1103, 1801
BseNI ACTGG 4 cut(s) 112, 418, 733, 1131
BseRI GAGGAG 3 cut(s) 350, 467, 817
BseSI GKGCMC 1 cut(s) 1694
BseX3I CGGCCG 1 cut(s) 805
BseXI GCAGC 9 cut(s) 275, 907, 910, 938, 1015, 1625, 1651, 1673, 1733
BseYI CCCAGC 3 cut(s) 929, 1648, 1852
Bsh1236I CGCG 7 cut(s) 285, 465, 857, 877, 911, 983, 1820
Bsh1285I CGRYCG 1 cut(s) 808
BshNI GGYRCC 3 cut(s) 43, 905, 994
BsiEI CGRYCG 1 cut(s) 808
BsiHKAI GWGCWC 2 cut(s) 119, 1130
BsiHKCI CYCGRG 3 cut(s) 293, 652, 1220
BsiSI CCGG 9 cut(s) 387, 497, 804, 808, 992, 1004, 1085, 1182, 1221
BslFI GGGAC 2 cut(s) 646, 1727
BslI CCNNNNNNNGG 6 cut(s) 87, 346, 670, 807, 1004, 1476
BsmAI GTCTC 4 cut(s) 325, 523, 1266, 1464
BsmBI CGTCTC 3 cut(s) 325, 523, 1266
BsmFI GGGAC 2 cut(s) 646, 1727
Bso31I GGTCTC 1 cut(s) 1464
BsoBI CYCGRG 3 cut(s) 293, 652, 1220
Bsp119I TTCGAA 1 cut(s) 456
Bsp1286I GDGCHC 3 cut(s) 119, 1130, 1694
Bsp19I CCATGG 1 cut(s) 60
BspCNI CTCAG 4 cut(s) 131, 682, 1102, 1800
BspFNI CGCG 7 cut(s) 285, 465, 857, 877, 911, 983, 1820
BspHI TCATGA 1 cut(s) 30
BspLI GGNNCC 8 cut(s) 45, 79, 511, 662, 763, 826, 907, 996
BspMAI CTGCAG 1 cut(s) 928
BspPI GGATC 3 cut(s) 517, 1311, 1595
BspQI GCTCTTC 1 cut(s) 452
BspT104I TTCGAA 1 cut(s) 456
BspT107I GGYRCC 3 cut(s) 43, 905, 994
BspTNI GGTCTC 1 cut(s) 1464
BsrDI GCAATG 2 cut(s) 1608, 1671
BsrFI RCCGGY 3 cut(s) 803, 1084, 1181
BsrI ACTGG 4 cut(s) 112, 418, 733, 1131
BssAI RCCGGY 3 cut(s) 803, 1084, 1181
BssNI GRCGYC 4 cut(s) 834, 872, 906, 995
BssT1I CCWWGG 6 cut(s) 60, 549, 958, 1583, 1732, 1758
Bst2UI CCWGG 2 cut(s) 637, 1718
Bst4CI ACNGT 1 cut(s) 616
Bst6I CTCTTC 6 cut(s) 149, 317, 452, 1049, 1234, 1248
BstACI GRCGYC 4 cut(s) 834, 872, 906, 995
BstBAI YACGTR 1 cut(s) 55
BstBI TTCGAA 1 cut(s) 456
BstC8I GCNNGC 8 cut(s) 281, 508, 560, 602, 805, 845, 1086, 1494
BstDEI CTNAG 6 cut(s) 118, 669, 1035, 1089, 1685, 1787
BstDSI CCRYGG 4 cut(s) 60, 463, 909, 1023
BstF5I GGATG 2 cut(s) 204, 1548
BstFNI CGCG 7 cut(s) 285, 465, 857, 877, 911, 983, 1820
BstH2I RGCGCY 3 cut(s) 909, 998, 1179
BstHHI GCGC 6 cut(s) 285, 470, 908, 985, 997, 1178
BstMAI GTCTC 4 cut(s) 325, 523, 1266, 1464
BstMCI CGRYCG 1 cut(s) 808
BstNI CCWGG 2 cut(s) 637, 1718
BstNSI RCATGY 3 cut(s) 1599, 1706, 1813
BstSCI CCNGG 7 cut(s) 495, 635, 990, 1003, 1219, 1220, 1716
BstSFI CTRYAG 2 cut(s) 924, 1471
BstSLI GKGCMC 1 cut(s) 1694
BstUI CGCG 7 cut(s) 285, 465, 857, 877, 911, 983, 1820
BstV1I GCAGC 9 cut(s) 275, 907, 910, 938, 1015, 1625, 1651, 1673, 1733
BstV2I GAAGAC 3 cut(s) 600, 729, 829
BstX2I RGATCY 2 cut(s) 96, 1105
BstXI CCANNNNNNTGG 1 cut(s) 67
BstYI RGATCY 2 cut(s) 96, 1105
BstZI CGGCCG 1 cut(s) 805
Bsu36I CCTNAGG 1 cut(s) 1685
BsuI GTATCC 1 cut(s) 1477
BtgI CCRYGG 4 cut(s) 60, 463, 909, 1023
BtrI CACGTC 3 cut(s) 28, 529, 610
BtsCI GGATG 2 cut(s) 204, 1548
BtsIMutI CAGTG 3 cut(s) 119, 425, 1138
Cac8I GCNNGC 8 cut(s) 281, 508, 560, 602, 805, 845, 1086, 1494
CciI TCATGA 1 cut(s) 30
CfoI GCGC 6 cut(s) 285, 470, 908, 985, 997, 1178
Cfr10I RCCGGY 3 cut(s) 803, 1084, 1181
Cfr42I CCGCGG 2 cut(s) 466, 912
Cfr9I CCCGGG 1 cut(s) 1220
CseI GACGC 4 cut(s) 846, 866, 880, 1538
Csp6I GTAC 5 cut(s) 52, 373, 433, 1258, 1772
CviQI GTAC 5 cut(s) 52, 373, 433, 1258, 1772
DdeI CTNAG 6 cut(s) 118, 669, 1035, 1089, 1685, 1787
DinI GGCGCC 2 cut(s) 907, 996
DriI GACNNNNNGTC 1 cut(s) 876
EaeI YGGCCR 4 cut(s) 57, 798, 805, 1183
EagI CGGCCG 1 cut(s) 805
Eam1104I CTCTTC 6 cut(s) 149, 317, 452, 1049, 1234, 1248
Eam1105I GACNNNNNGTC 1 cut(s) 876
EarI CTCTTC 6 cut(s) 149, 317, 452, 1049, 1234, 1248
Ecl136II GAGCTC 1 cut(s) 1128
EclXI CGGCCG 1 cut(s) 805
Eco130I CCWWGG 6 cut(s) 60, 549, 958, 1583, 1732, 1758
Eco147I AGGCCT 1 cut(s) 1060
Eco24I GRGCYC 1 cut(s) 1130
Eco31I GGTCTC 1 cut(s) 1464
Eco32I GATATC 1 cut(s) 541
Eco47I GGWCC 4 cut(s) 267, 300, 400, 660
Eco52I CGGCCG 1 cut(s) 805
Eco53kI GAGCTC 1 cut(s) 1128
Eco81I CCTNAGG 1 cut(s) 1685
Eco88I CYCGRG 3 cut(s) 293, 652, 1220
EcoICRI GAGCTC 1 cut(s) 1128
EcoO109I RGGNCCY 2 cut(s) 660, 673
EcoRII CCWGG 2 cut(s) 635, 1716
EcoRV GATATC 1 cut(s) 541
EcoT14I CCWWGG 6 cut(s) 60, 549, 958, 1583, 1732, 1758
EcoT38I GRGCYC 1 cut(s) 1130
EgeI GGCGCC 2 cut(s) 907, 996
EheI GGCGCC 2 cut(s) 907, 996
ErhI CCWWGG 6 cut(s) 60, 549, 958, 1583, 1732, 1758
Esp3I CGTCTC 3 cut(s) 325, 523, 1266
FaqI GGGAC 2 cut(s) 646, 1727
FauI CCCGC 4 cut(s) 701, 836, 959, 1091
FauNDI CATATG 1 cut(s) 1113
FbaI TGATCA 3 cut(s) 3, 1189, 1413
FblI GTMKAC 2 cut(s) 531, 1839
FokI GGATG 2 cut(s) 191, 1555
FriOI GRGCYC 1 cut(s) 1130
FspBI CTAG 2 cut(s) 741, 756
GlaI GCGC 6 cut(s) 284, 469, 907, 984, 996, 1177
GsaI CCCAGC 3 cut(s) 933, 1652, 1856
GsuI CTGGAG 7 cut(s) 215, 401, 619, 716, 748, 1114, 1423
HaeII RGCGCY 3 cut(s) 909, 998, 1179
HapII CCGG 9 cut(s) 387, 497, 804, 808, 992, 1004, 1085, 1182, 1221
HgaI GACGC 4 cut(s) 846, 866, 880, 1538
HhaI GCGC 6 cut(s) 285, 470, 908, 985, 997, 1178
Hin1I GRCGYC 4 cut(s) 834, 872, 906, 995
Hin6I GCGC 6 cut(s) 283, 468, 906, 983, 995, 1176
HinP1I GCGC 6 cut(s) 283, 468, 906, 983, 995, 1176
HincII GTYRAC 1 cut(s) 532
HindII GTYRAC 1 cut(s) 532
HindIII AAGCTT 1 cut(s) 1438
HinfI GANTC 5 cut(s) 351, 474, 533, 1387, 1635
HpaII CCGG 9 cut(s) 387, 497, 804, 808, 992, 1004, 1085, 1182, 1221
HphI GGTGA 4 cut(s) 298, 604, 700, 1337
Hpy166II GTNNAC 5 cut(s) 300, 435, 532, 1774, 1840
Hpy188III TCNNGA 9 cut(s) 31, 232, 520, 569, 654, 741, 861, 1091, 1402
Hpy8I GTNNAC 5 cut(s) 300, 435, 532, 1774, 1840
Hpy99I CGWCG 9 cut(s) 140, 413, 533, 836, 862, 874, 886, 902, 1369
HpyAV CCTTC 4 cut(s) 175, 651, 708, 1316
HpyCH4III ACNGT 1 cut(s) 616
HpyCH4IV ACGT 7 cut(s) 27, 54, 528, 609, 834, 1041, 1770
HpyCH4V TGCA 4 cut(s) 423, 926, 1613, 1702
HpyF3I CTNAG 6 cut(s) 118, 669, 1035, 1089, 1685, 1787
HpySE526I ACGT 7 cut(s) 27, 54, 528, 609, 834, 1041, 1770
Hsp92I GRCGYC 4 cut(s) 834, 872, 906, 995
HspAI GCGC 6 cut(s) 283, 468, 906, 983, 995, 1176
KasI GGCGCC 2 cut(s) 905, 994
KroI GCCGGC 2 cut(s) 803, 1084
KroNI GCCGGC 2 cut(s) 805, 1086
Ksp22I TGATCA 3 cut(s) 3, 1189, 1413
KspI CCGCGG 2 cut(s) 466, 912
LguI GCTCTTC 1 cut(s) 452
LmnI GCTCC 9 cut(s) 83, 515, 609, 767, 830, 917, 1054, 1125, 1133
Lsp1109I GCAGC 9 cut(s) 275, 907, 910, 938, 1015, 1625, 1651, 1673, 1733
LweI GCATC 3 cut(s) 132, 432, 1347
MaeI CTAG 2 cut(s) 741, 756
MaeII ACGT 7 cut(s) 27, 54, 528, 609, 834, 1041, 1770
MaeIII GTNAC 2 cut(s) 610, 935
MflI RGATCY 2 cut(s) 96, 1105
MhlI GDGCHC 3 cut(s) 119, 1130, 1694
MlsI TGGCCA 1 cut(s) 59
MluCI AATT 3 cut(s) 1409, 1603, 1737
MluNI TGGCCA 1 cut(s) 59
Mly113I GGCGCC 2 cut(s) 906, 995
MlyI GAGTC 2 cut(s) 468, 527
MmeI TCCRAC 5 cut(s) 621, 651, 840, 855, 1388
Mox20I TGGCCA 1 cut(s) 59
MroNI GCCGGC 2 cut(s) 803, 1084
MroXI GAANNNNTTC 1 cut(s) 98
MscI TGGCCA 1 cut(s) 59
MseI TTAA 1 cut(s) 182
MslI CAYNNNNRTG 1 cut(s) 440
Msp20I TGGCCA 1 cut(s) 59
MspA1I CMGCKG 5 cut(s) 465, 911, 929, 1652, 1664
MspI CCGG 9 cut(s) 387, 497, 804, 808, 992, 1004, 1085, 1182, 1221
MspR9I CCNGG 7 cut(s) 497, 637, 992, 1005, 1221, 1222, 1718
MvaI CCWGG 2 cut(s) 637, 1718
MvnI CGCG 7 cut(s) 285, 465, 857, 877, 911, 983, 1820
NaeI GCCGGC 2 cut(s) 805, 1086
NarI GGCGCC 2 cut(s) 906, 995
NciI CCSGG 5 cut(s) 497, 992, 1005, 1221, 1222
NcoI CCATGG 1 cut(s) 60
NdeI CATATG 1 cut(s) 1113
NgoMIV GCCGGC 2 cut(s) 803, 1084
NlaIV GGNNCC 8 cut(s) 45, 79, 511, 662, 763, 826, 907, 996
NmeAIII GCCGAG 3 cut(s) 607, 742, 969
NmuCI GTSAC 1 cut(s) 610
NspI RCATGY 3 cut(s) 1599, 1706, 1813
NspV TTCGAA 1 cut(s) 456
PaeR7I CTCGAG 2 cut(s) 293, 652
PagI TCATGA 1 cut(s) 30
PceI AGGCCT 1 cut(s) 1060
PciSI GCTCTTC 1 cut(s) 452
PcsI WCGNNNNNNNCGW 3 cut(s) 828, 866, 878
PdiI GCCGGC 2 cut(s) 805, 1086
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 3 cut(s) 351, 1387, 1635
PflFI GACNNNGTC 1 cut(s) 856
PfoI TCCNGGA 2 cut(s) 495, 1003
PleI GAGTC 2 cut(s) 468, 527
PluTI GGCGCC 2 cut(s) 909, 998
PpsI GAGTC 2 cut(s) 468, 527
Ppu21I YACGTR 1 cut(s) 55
PpuMI RGGWCCY 1 cut(s) 660
Psp124BI GAGCTC 1 cut(s) 1130
Psp1406I AACGTT 1 cut(s) 1041
Psp5II RGGWCCY 1 cut(s) 660
Psp6I CCWGG 2 cut(s) 635, 1716
PspFI CCCAGC 3 cut(s) 929, 1648, 1852
PspGI CCWGG 2 cut(s) 635, 1716
PspN4I GGNNCC 8 cut(s) 45, 79, 511, 662, 763, 826, 907, 996
PspPPI RGGWCCY 1 cut(s) 660
PspXI VCTCGAGB 1 cut(s) 293
PstI CTGCAG 1 cut(s) 928
PsuI RGATCY 2 cut(s) 96, 1105
PsyI GACNNNGTC 1 cut(s) 856
PvuII CAGCTG 3 cut(s) 929, 1652, 1664
RsaI GTAC 5 cut(s) 53, 374, 434, 1259, 1773
RsaNI GTAC 5 cut(s) 52, 373, 433, 1258, 1772
RseI CAYNNNNRTG 1 cut(s) 440
SacI GAGCTC 1 cut(s) 1130
SacII CCGCGG 2 cut(s) 466, 912
SalI GTCGAC 1 cut(s) 530
SapI GCTCTTC 1 cut(s) 452
SaqAI TTAA 1 cut(s) 182
SchI GAGTC 2 cut(s) 468, 527
ScrFI CCNGG 7 cut(s) 497, 637, 992, 1005, 1221, 1222, 1718
SduI GDGCHC 3 cut(s) 119, 1130, 1694
SfaNI GCATC 3 cut(s) 132, 432, 1347
SfcI CTRYAG 2 cut(s) 924, 1471
SfiI GGCCNNNNNGGCC 1 cut(s) 1081
SfoI GGCGCC 2 cut(s) 907, 996
Sfr274I CTCGAG 2 cut(s) 293, 652
Sfr303I CCGCGG 2 cut(s) 466, 912
SfuI TTCGAA 1 cut(s) 456
SgrBI CCGCGG 2 cut(s) 466, 912
SinI GGWCC 4 cut(s) 267, 300, 400, 660
SlaI CTCGAG 2 cut(s) 293, 652
SmaI CCCGGG 1 cut(s) 1222
SmiMI CAYNNNNRTG 1 cut(s) 440
SmlI CTYRAG 3 cut(s) 293, 652, 1435
SmoI CTYRAG 3 cut(s) 293, 652, 1435
Sse9I AATT 3 cut(s) 1409, 1603, 1737
SseBI AGGCCT 1 cut(s) 1060
SspDI GGCGCC 2 cut(s) 905, 994
SspMI CTAG 2 cut(s) 741, 756
SstI GAGCTC 1 cut(s) 1130
StuI AGGCCT 1 cut(s) 1060
StyD4I CCNGG 7 cut(s) 495, 635, 990, 1003, 1219, 1220, 1716
StyI CCWWGG 6 cut(s) 60, 549, 958, 1583, 1732, 1758
TaaI ACNGT 1 cut(s) 616
TaiI ACGT 7 cut(s) 30, 57, 531, 612, 837, 1044, 1773
TaqI TCGA 9 cut(s) 294, 456, 521, 531, 570, 653, 860, 884, 1511
TasI AATT 3 cut(s) 1409, 1603, 1737
TatI WGTACW 1 cut(s) 1257
TauI GCSGC 6 cut(s) 221, 288, 468, 803, 877, 911
TfiI GAWTC 3 cut(s) 351, 1387, 1635
Tru1I TTAA 1 cut(s) 182
Tru9I TTAA 1 cut(s) 182
TscAI CASTG 3 cut(s) 119, 425, 1138
TseFI GTSAC 1 cut(s) 610
TseI GCWGC 9 cut(s) 288, 920, 923, 926, 1028, 1613, 1661, 1664, 1721
Tsp45I GTSAC 1 cut(s) 610
TspDTI ATGAA 8 cut(s) 163, 215, 439, 941, 1100, 1182, 1325, 1331
TspGWI ACGGA 4 cut(s) 70, 307, 870, 915
TspMI CCCGGG 1 cut(s) 1220
TspRI CASTG 3 cut(s) 119, 425, 1138
Tth111I GACNNNGTC 1 cut(s) 856
VpaK11BI GGWCC 4 cut(s) 267, 300, 400, 660
XapI RAATTY 1 cut(s) 1603
XbaI TCTAGA 1 cut(s) 740
XceI RCATGY 3 cut(s) 1599, 1706, 1813
XhoI CTCGAG 2 cut(s) 293, 652
XmaI CCCGGG 1 cut(s) 1220
XmiI GTMKAC 2 cut(s) 531, 1839
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 2 cut(s) 741, 756
ZraI GACGTC 1 cut(s) 835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.