RchiOBHm_Chr7g0178461

May act as a component of the auxin efflux carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0002064
Physical Location & Seq
Reverse (-)
1117738 .. 1121740
4003 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ15903

Sequence Viewer

Length: 1866 bp
ATGATCACATTATCCGACTTCTACCACGTCATGACGGCGGTGGTTCCGCTATACGTGGCCATGGTCTTGGCCTACGGCTCCGTCAAGTGGTGGAAGATCTTCACCCCCGACCAGTGCTCCGGCATCAACCGGTTCGTTGCCCTCTTCGCCGTTCCCTTACTCTCCTTCCACTTCATCTCCTCCAACAACCCCTACGCCATGAACACCCGCTTCCTCGCCGCCGACACTCTCCAGAAGCTGATCGTCCTCGCCGTCCTCGGCGTCTGGTCCAAAGTCAGCAAACGCGGCTGCCTCGAGTGGACCATCACCCTCTTCTCCGTCTCCACTCTCCCCAACACCCTTGTCATGGGAATCCCGCTCCTCAAAGGAATGTACGGCGACTTCTCCGGCAGCCTCATGGTCCAAATCGTCGTCCTCCAGTGCATTATCTGGTACACATTGATGCTCTTCATGTTCGAATACCGTGGCGCCCGGCTCCTCATCTCCGAGCAGTTCCCCGACACCGCCGGCTCCATCGTCTCCATCCACGTCGACTCCGATATCATGTCCTTGGATGGCAGACAACCTCTCGAGACCGAAGCCGAAATCAAAGAAGACGGCAAGCTCCACGTAACTGTTAGAAAATCCAACGCCTCAAGGTCTGACATTTACTCCAGAAGGTCTCATTCTCAAGGGCTCTCCTCCAATACTCCCCGCCCCTCCAATCTCACCAATGCAGAGATTTACTCGCTACAATCATCCAGAAACCCTACTCCCAGAGGTTCCAGCTTCAACCACACTGACTTTTACTCCATGATGGCCGCCGGCCGGAACTCGAATTTTGGGTCCTCCGACGTTTTCGGAGGGCCGTTGACGGCGTCCAGAGGCCCGACGCCGCGGCCGTCGAATTATGAGGACGACGGCGGCGCCGCCGTGGGTGCTGCTGCAGCTGGCAGCAACAAGCCGAGGTATCATTACCAAGGAGGAGGGAACAATACAACAGCGCATTACCCGGCCCCGAATCCTGGAATGTTCTCGCCTACCACGGCGGCCTCTAAGAACGTTGTCGCTCCCAAGAGGCCTAATGGAAATGGGCCTAATGGGCCGGCGGCTCAGGACGGCGGTAGGGATCTTCATATGTTTGTCTGGAGCTCCAGTGCTTCTCCTGTTTCTGATGTGTTTGGTAGCAATGAATATGGGGCCGCTGGTCATGATCAGAAAGAAGTCAAATTGGCCGTTTCTCCGGGAAAAGTGGAGGGTAGAAGAGAGAACCAAGAAGAGTACATGGTGGAGAGAGATGAGTTCAGCTTTGGGAACAGAGTCGTGGATCAGATGAACATGAATGAGGGTGAGAAAGTGGATGTGAATAAGGCCAAAGTGATGCCTCCGACGAGTGTGATGACGAGGCTGATTCTCATCATGGTCTGGAGAAAATTGATCAGAAACCCAAACACTTACTCAAGCTTGATCGGCCTCACTTGGTCTCTGGTATCCTTCAGGTGGCATCTAGAAATGCCAGCACTCATAGCAAAGTCGATAGCCATTCTATCAGACGCAGGGCTTGGGATGGCCATGTTCAGTCTTGGTCTGTTTATGGCTTTACAACCACGGATCATAGCATGTGGAAATTCCATTGCAGCTTTTACTATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGCCTTAGGGGCACTCTCTTACATGTTGCCATTGTCCAGGCAGCTCTACCCCAAGGAATTGTCCCCTTTGTCTTTGCCAAGGAATACAACGTACACCCTGATATTCTCAGCACAGGAGTTATATTCGGCATGTTGATCGCGTTGCCCATTACGCTTGTCTACTACATAATGCTGGGGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005911 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009314 GO:0009416 GO:0009505 GO:0009506 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009914 GO:0009921 GO:0009925 GO:0009926 GO:0009965 GO:0009966 GO:0009987 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010229 GO:0010252 GO:0010315 GO:0010329 GO:0010338 GO:0010358 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0016021 GO:0016323 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0023052 GO:0030054 GO:0030312 GO:0031224 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045177 GO:0045178 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048532 GO:0048583 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048830 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0080161 GO:0090567 GO:0090698 GO:0098590 GO:0098796 GO:0098797 GO:0099402 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mem_trans

Protein Analysis

621

Amino Acids

67.57

Weight (kDa)

9.03

Isoelectric Point (pI)

34.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mem_trans PF03547 9 - 616 8.1e-130 Membrane transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 467, 905
AccBSI CCGCTC 1 cut(s) 358
AccI GTMKAC 2 cut(s) 531, 1842
AccII CGCG 3 cut(s) 285, 877, 1823
AclI AACGTT 1 cut(s) 1041
AclWI GGATC 3 cut(s) 1116, 1314, 1598
AcoI YGGCCR 6 cut(s) 57, 798, 805, 878, 1212, 1548
AcsI RAATTY 2 cut(s) 817, 1606
AcuI CTGAAG 1 cut(s) 1459
AcyI GRCGYC 5 cut(s) 261, 468, 857, 872, 906
AfaI GTAC 4 cut(s) 374, 434, 1262, 1776
AfiI CCNNNNNNNGG 5 cut(s) 87, 346, 807, 1004, 1479
AflIII ACRYGT 1 cut(s) 1705
AgeI ACCGGT 1 cut(s) 129
AgsI TTSAA 1 cut(s) 772
AjiI CACGTC 2 cut(s) 28, 529
AjnI CCWGG 2 cut(s) 1003, 1719
Alw21I GWGCWC 2 cut(s) 119, 1133
Alw26I GTCTC 5 cut(s) 325, 523, 566, 666, 1467
AlwI GGATC 3 cut(s) 1116, 1314, 1598
AlwNI CAGNNNCTG 1 cut(s) 238
Ama87I CYCGRG 2 cut(s) 293, 569
ApoI RAATTY 2 cut(s) 817, 1606
ArsI GACNNNNNNTTYG 2 cut(s) 809, 841
AsiGI ACCGGT 1 cut(s) 129
Asp700I GAANNNNTTC 1 cut(s) 98
AspLEI GCGC 3 cut(s) 470, 908, 985
AsuC2I CCSGG 3 cut(s) 472, 992, 1224
AsuHPI GGTGA 4 cut(s) 94, 298, 700, 1340
AsuII TTCGAA 1 cut(s) 456
AvaI CYCGRG 2 cut(s) 293, 569
AvaII GGWCC 5 cut(s) 267, 300, 400, 825, 1649
AxyI CCTNAGG 1 cut(s) 1688
BaeGI GKGCMC 1 cut(s) 1697
BalI TGGCCA 2 cut(s) 59, 1550
BanI GGYRCC 2 cut(s) 467, 905
BanII GRGCYC 2 cut(s) 678, 1133
BarI GAAGNNNNNNTAC 2 cut(s) 365, 397
BbsI GAAGAC 1 cut(s) 600
Bbv12I GWGCWC 2 cut(s) 119, 1133
BccI CCATC 6 cut(s) 311, 521, 530, 548, 790, 1540
BcgI CGANNNNNNTGC 2 cut(s) 1801, 1835
BciT130I CCWGG 2 cut(s) 1005, 1721
BciVI GTATCC 1 cut(s) 1480
BclI TGATCA 3 cut(s) 3, 1192, 1416
BcnI CCSGG 3 cut(s) 472, 992, 1224
BcoDI GTCTC 5 cut(s) 325, 523, 566, 666, 1467
BfaI CTAG 1 cut(s) 1487
BfmI CTRYAG 1 cut(s) 924
BfoI RGCGCY 2 cut(s) 471, 909
BfuI GTATCC 1 cut(s) 1480
BglI GCCNNNNNGGC 2 cut(s) 1081, 1692
BglII AGATCT 1 cut(s) 96
Bme1390I CCNGG 5 cut(s) 472, 992, 1005, 1224, 1721
Bme18I GGWCC 5 cut(s) 267, 300, 400, 825, 1649
BmeT110I CYCGRG 2 cut(s) 293, 569
BmgBI CACGTC 2 cut(s) 28, 529
BmrFI CCNGG 5 cut(s) 472, 992, 1005, 1224, 1721
BmsI GCATC 4 cut(s) 132, 432, 1350, 1492
BpiI GAAGAC 1 cut(s) 600
BplI GAGNNNNNCTC 2 cut(s) 710, 742
BpmI CTGGAG 6 cut(s) 215, 401, 637, 1117, 1147, 1426
Bpu10I CCTNAGC 1 cut(s) 1092
Bpu14I TTCGAA 1 cut(s) 456
BpuEI CTTGAG 3 cut(s) 619, 654, 1423
BpuMI CCSGG 3 cut(s) 472, 992, 1224
BsaAI YACGTR 2 cut(s) 55, 610
BsaBI GATNNNNATC 1 cut(s) 1394
BsaHI GRCGYC 5 cut(s) 261, 468, 857, 872, 906
BsaI GGTCTC 3 cut(s) 566, 666, 1467
BsaWI WCCGGW 1 cut(s) 129
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 346, 807, 1004, 1479
Bse118I RCCGGY 4 cut(s) 129, 506, 803, 1084
Bse1I ACTGG 3 cut(s) 112, 418, 1134
Bse21I CCTNAGG 1 cut(s) 1688
Bse3DI GCAATG 3 cut(s) 1174, 1611, 1674
Bse8I GATNNNNATC 1 cut(s) 1394
BseBI CCWGG 2 cut(s) 1005, 1721
BseGI GGATG 5 cut(s) 522, 559, 737, 1345, 1551
BseJI GATNNNNATC 1 cut(s) 1394
BseLI CCNNNNNNNGG 5 cut(s) 87, 346, 807, 1004, 1479
BseMI GCAATG 3 cut(s) 1174, 1611, 1674
BseMII CTCAG 2 cut(s) 1106, 1804
BseNI ACTGG 3 cut(s) 112, 418, 1134
BseRI GAGGAG 5 cut(s) 169, 350, 467, 670, 978
BseSI GKGCMC 1 cut(s) 1697
BseX3I CGGCCG 2 cut(s) 805, 878
BseYI CCCAGC 1 cut(s) 1855
Bsh1236I CGCG 3 cut(s) 285, 877, 1823
Bsh1285I CGRYCG 2 cut(s) 808, 881
BshNI GGYRCC 2 cut(s) 467, 905
BshTI ACCGGT 1 cut(s) 129
BsiEI CGRYCG 2 cut(s) 808, 881
BsiHKAI GWGCWC 2 cut(s) 119, 1133
BsiHKCI CYCGRG 2 cut(s) 293, 569
BslFI GGGAC 1 cut(s) 1730
BslI CCNNNNNNNGG 5 cut(s) 87, 346, 807, 1004, 1479
BsmAI GTCTC 5 cut(s) 325, 523, 566, 666, 1467
BsmBI CGTCTC 2 cut(s) 325, 523
BsmFI GGGAC 1 cut(s) 1730
Bso31I GGTCTC 3 cut(s) 566, 666, 1467
BsoBI CYCGRG 2 cut(s) 293, 569
Bsp119I TTCGAA 1 cut(s) 456
Bsp1286I GDGCHC 4 cut(s) 119, 678, 1133, 1697
Bsp19I CCATGG 1 cut(s) 60
BspCNI CTCAG 2 cut(s) 1105, 1803
BspFNI CGCG 3 cut(s) 285, 877, 1823
BspHI TCATGA 2 cut(s) 30, 1189
BspMAI CTGCAG 1 cut(s) 928
BspPI GGATC 3 cut(s) 1116, 1314, 1598
BspQI GCTCTTC 1 cut(s) 452
BspT104I TTCGAA 1 cut(s) 456
BspT107I GGYRCC 2 cut(s) 467, 905
BspTNI GGTCTC 3 cut(s) 566, 666, 1467
BsrBI CCGCTC 1 cut(s) 358
BsrDI GCAATG 3 cut(s) 1174, 1611, 1674
BsrFI RCCGGY 4 cut(s) 129, 506, 803, 1084
BsrI ACTGG 3 cut(s) 112, 418, 1134
BssAI RCCGGY 4 cut(s) 129, 506, 803, 1084
BssNI GRCGYC 5 cut(s) 261, 468, 857, 872, 906
BssT1I CCWWGG 5 cut(s) 60, 549, 958, 1735, 1761
Bst2UI CCWGG 2 cut(s) 1005, 1721
Bst4CI ACNGT 2 cut(s) 464, 616
Bst6I CTCTTC 5 cut(s) 149, 317, 452, 1237, 1251
BstACI GRCGYC 5 cut(s) 261, 468, 857, 872, 906
BstBAI YACGTR 2 cut(s) 55, 610
BstBI TTCGAA 1 cut(s) 456
BstC8I GCNNGC 6 cut(s) 508, 602, 805, 931, 1086, 1497
BstDEI CTNAG 4 cut(s) 1035, 1092, 1688, 1790
BstDSI CCRYGG 6 cut(s) 60, 463, 875, 912, 1023, 1586
BstF5I GGATG 5 cut(s) 522, 559, 737, 1345, 1551
BstFNI CGCG 3 cut(s) 285, 877, 1823
BstH2I RGCGCY 2 cut(s) 471, 909
BstHHI GCGC 3 cut(s) 470, 908, 985
BstMAI GTCTC 5 cut(s) 325, 523, 566, 666, 1467
BstMCI CGRYCG 2 cut(s) 808, 881
BstNI CCWGG 2 cut(s) 1005, 1721
BstNSI RCATGY 3 cut(s) 1602, 1709, 1816
BstSCI CCNGG 5 cut(s) 470, 990, 1003, 1222, 1719
BstSFI CTRYAG 1 cut(s) 924
BstSLI GKGCMC 1 cut(s) 1697
BstUI CGCG 3 cut(s) 285, 877, 1823
BstV2I GAAGAC 1 cut(s) 600
BstX2I RGATCY 2 cut(s) 96, 1108
BstXI CCANNNNNNTGG 1 cut(s) 67
BstYI RGATCY 2 cut(s) 96, 1108
BstZI CGGCCG 2 cut(s) 805, 878
Bsu36I CCTNAGG 1 cut(s) 1688
BsuI GTATCC 1 cut(s) 1480
BtgI CCRYGG 6 cut(s) 60, 463, 875, 912, 1023, 1586
BtrI CACGTC 2 cut(s) 28, 529
BtsCI GGATG 5 cut(s) 522, 559, 737, 1345, 1551
BtsIMutI CAGTG 4 cut(s) 119, 425, 777, 1141
Cac8I GCNNGC 6 cut(s) 508, 602, 805, 931, 1086, 1497
CaiI CAGNNNCTG 1 cut(s) 238
CciI TCATGA 2 cut(s) 30, 1189
CfoI GCGC 3 cut(s) 470, 908, 985
Cfr10I RCCGGY 4 cut(s) 129, 506, 803, 1084
Cfr42I CCGCGG 1 cut(s) 878
CseI GACGC 4 cut(s) 250, 846, 880, 1541
Csp6I GTAC 4 cut(s) 373, 433, 1261, 1775
CspAI ACCGGT 1 cut(s) 129
CviQI GTAC 4 cut(s) 373, 433, 1261, 1775
DdeI CTNAG 4 cut(s) 1035, 1092, 1688, 1790
DinI GGCGCC 2 cut(s) 469, 907
EaeI YGGCCR 6 cut(s) 57, 798, 805, 878, 1212, 1548
EagI CGGCCG 2 cut(s) 805, 878
Eam1104I CTCTTC 5 cut(s) 149, 317, 452, 1237, 1251
EarI CTCTTC 5 cut(s) 149, 317, 452, 1237, 1251
Ecl136II GAGCTC 1 cut(s) 1131
EclXI CGGCCG 2 cut(s) 805, 878
Eco130I CCWWGG 5 cut(s) 60, 549, 958, 1735, 1761
Eco147I AGGCCT 1 cut(s) 1060
Eco24I GRGCYC 2 cut(s) 678, 1133
Eco31I GGTCTC 3 cut(s) 566, 666, 1467
Eco32I GATATC 1 cut(s) 541
Eco47I GGWCC 5 cut(s) 267, 300, 400, 825, 1649
Eco52I CGGCCG 2 cut(s) 805, 878
Eco53kI GAGCTC 1 cut(s) 1131
Eco57I CTGAAG 1 cut(s) 1459
Eco81I CCTNAGG 1 cut(s) 1688
Eco88I CYCGRG 2 cut(s) 293, 569
EcoICRI GAGCTC 1 cut(s) 1131
EcoO109I RGGNCCY 1 cut(s) 825
EcoRII CCWGG 2 cut(s) 1003, 1719
EcoRV GATATC 1 cut(s) 541
EcoT14I CCWWGG 5 cut(s) 60, 549, 958, 1735, 1761
EcoT38I GRGCYC 2 cut(s) 678, 1133
EgeI GGCGCC 2 cut(s) 469, 907
EheI GGCGCC 2 cut(s) 469, 907
ErhI CCWWGG 5 cut(s) 60, 549, 958, 1735, 1761
Esp3I CGTCTC 2 cut(s) 325, 523
FaqI GGGAC 1 cut(s) 1730
FauI CCCGC 3 cut(s) 215, 363, 701
FauNDI CATATG 1 cut(s) 1116
FbaI TGATCA 3 cut(s) 3, 1192, 1416
FblI GTMKAC 2 cut(s) 531, 1842
FokI GGATG 5 cut(s) 509, 566, 724, 1352, 1558
FriOI GRGCYC 2 cut(s) 678, 1133
FspBI CTAG 1 cut(s) 1487
GlaI GCGC 3 cut(s) 469, 907, 984
GsaI CCCAGC 1 cut(s) 1859
GsuI CTGGAG 6 cut(s) 215, 401, 637, 1117, 1147, 1426
HaeII RGCGCY 2 cut(s) 471, 909
HgaI GACGC 4 cut(s) 250, 846, 880, 1541
HhaI GCGC 3 cut(s) 470, 908, 985
Hin1I GRCGYC 5 cut(s) 261, 468, 857, 872, 906
Hin6I GCGC 3 cut(s) 468, 906, 983
HinP1I GCGC 3 cut(s) 468, 906, 983
HincII GTYRAC 2 cut(s) 532, 852
HindII GTYRAC 2 cut(s) 532, 852
HindIII AAGCTT 1 cut(s) 1441
HinfI GANTC 6 cut(s) 351, 533, 1000, 1299, 1390, 1638
HphI GGTGA 4 cut(s) 94, 298, 700, 1340
Hpy166II GTNNAC 6 cut(s) 300, 435, 532, 852, 1777, 1843
Hpy8I GTNNAC 6 cut(s) 300, 435, 532, 852, 1777, 1843
Hpy99I CGWCG 7 cut(s) 413, 533, 836, 874, 886, 902, 1372
HpyAV CCTTC 3 cut(s) 175, 651, 1483
HpyCH4III ACNGT 2 cut(s) 464, 616
HpyCH4IV ACGT 7 cut(s) 27, 54, 528, 609, 834, 1041, 1773
HpyCH4V TGCA 4 cut(s) 423, 716, 926, 1616
HpyF3I CTNAG 4 cut(s) 1035, 1092, 1688, 1790
HpySE526I ACGT 7 cut(s) 27, 54, 528, 609, 834, 1041, 1773
Hsp92I GRCGYC 5 cut(s) 261, 468, 857, 872, 906
HspAI GCGC 3 cut(s) 468, 906, 983
KasI GGCGCC 2 cut(s) 467, 905
KroI GCCGGC 3 cut(s) 506, 803, 1084
KroNI GCCGGC 3 cut(s) 508, 805, 1086
Ksp22I TGATCA 3 cut(s) 3, 1192, 1416
KspI CCGCGG 1 cut(s) 878
LguI GCTCTTC 1 cut(s) 452
LmnI GCTCC 9 cut(s) 83, 122, 363, 480, 515, 609, 1054, 1128, 1136
LweI GCATC 4 cut(s) 132, 432, 1350, 1492
MaeI CTAG 1 cut(s) 1487
MaeII ACGT 7 cut(s) 27, 54, 528, 609, 834, 1041, 1773
MaeIII GTNAC 1 cut(s) 610
MbiI CCGCTC 1 cut(s) 358
MboII GAAGA 9 cut(s) 91, 106, 136, 304, 439, 605, 1103, 1254, 1268
MflI RGATCY 2 cut(s) 96, 1108
MhlI GDGCHC 4 cut(s) 119, 678, 1133, 1697
MlsI TGGCCA 2 cut(s) 59, 1550
MluCI AATT 6 cut(s) 817, 886, 1208, 1412, 1606, 1740
MluNI TGGCCA 2 cut(s) 59, 1550
Mly113I GGCGCC 2 cut(s) 468, 906
MlyI GAGTC 2 cut(s) 527, 1308
MmeI TCCRAC 5 cut(s) 39, 207, 651, 855, 1391
Mox20I TGGCCA 2 cut(s) 59, 1550
MroNI GCCGGC 3 cut(s) 506, 803, 1084
MroXI GAANNNNTTC 1 cut(s) 98
MscI TGGCCA 2 cut(s) 59, 1550
MslI CAYNNNNRTG 1 cut(s) 440
Msp20I TGGCCA 2 cut(s) 59, 1550
MspA1I CMGCKG 5 cut(s) 877, 929, 1184, 1655, 1667
MspR9I CCNGG 5 cut(s) 472, 992, 1005, 1224, 1721
MvaI CCWGG 2 cut(s) 1005, 1721
MvnI CGCG 3 cut(s) 285, 877, 1823
NaeI GCCGGC 3 cut(s) 508, 805, 1086
NarI GGCGCC 2 cut(s) 468, 906
NciI CCSGG 3 cut(s) 472, 992, 1224
NcoI CCATGG 1 cut(s) 60
NdeI CATATG 1 cut(s) 1116
NgoMIV GCCGGC 3 cut(s) 506, 803, 1084
NmeAIII GCCGAG 2 cut(s) 237, 969
NspI RCATGY 3 cut(s) 1602, 1709, 1816
NspV TTCGAA 1 cut(s) 456
PaeR7I CTCGAG 2 cut(s) 293, 569
PagI TCATGA 2 cut(s) 30, 1189
PceI AGGCCT 1 cut(s) 1060
PciI ACATGT 1 cut(s) 1705
PciSI GCTCTTC 1 cut(s) 452
PcsI WCGNNNNNNNCGW 3 cut(s) 249, 534, 878
PdiI GCCGGC 3 cut(s) 508, 805, 1086
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 4 cut(s) 351, 1000, 1390, 1638
PflFI GACNNNGTC 1 cut(s) 856
PfoI TCCNGGA 2 cut(s) 1003, 1222
PinAI ACCGGT 1 cut(s) 129
PleI GAGTC 2 cut(s) 527, 1307
PluTI GGCGCC 2 cut(s) 471, 909
PpsI GAGTC 2 cut(s) 527, 1307
Ppu21I YACGTR 2 cut(s) 55, 610
PpuMI RGGWCCY 1 cut(s) 825
PscI ACATGT 1 cut(s) 1705
Psp124BI GAGCTC 1 cut(s) 1133
Psp1406I AACGTT 1 cut(s) 1041
Psp5II RGGWCCY 1 cut(s) 825
Psp6I CCWGG 2 cut(s) 1003, 1719
PspFI CCCAGC 1 cut(s) 1855
PspGI CCWGG 2 cut(s) 1003, 1719
PspPPI RGGWCCY 1 cut(s) 825
PspXI VCTCGAGB 1 cut(s) 293
PstI CTGCAG 1 cut(s) 928
PstNI CAGNNNCTG 1 cut(s) 238
PsuI RGATCY 2 cut(s) 96, 1108
PsyI GACNNNGTC 1 cut(s) 856
PvuII CAGCTG 3 cut(s) 929, 1655, 1667
RsaI GTAC 4 cut(s) 374, 434, 1262, 1776
RsaNI GTAC 4 cut(s) 373, 433, 1261, 1775
RseI CAYNNNNRTG 1 cut(s) 440
SacI GAGCTC 1 cut(s) 1133
SacII CCGCGG 1 cut(s) 878
SalI GTCGAC 1 cut(s) 530
SapI GCTCTTC 1 cut(s) 452
SchI GAGTC 2 cut(s) 527, 1308
ScrFI CCNGG 5 cut(s) 472, 992, 1005, 1224, 1721
SduI GDGCHC 4 cut(s) 119, 678, 1133, 1697
SfaNI GCATC 4 cut(s) 132, 432, 1350, 1492
SfcI CTRYAG 1 cut(s) 924
SfiI GGCCNNNNNGGCC 1 cut(s) 1081
SfoI GGCGCC 2 cut(s) 469, 907
Sfr274I CTCGAG 2 cut(s) 293, 569
Sfr303I CCGCGG 1 cut(s) 878
SfuI TTCGAA 1 cut(s) 456
SgrBI CCGCGG 1 cut(s) 878
SinI GGWCC 5 cut(s) 267, 300, 400, 825, 1649
SlaI CTCGAG 2 cut(s) 293, 569
SmiMI CAYNNNNRTG 1 cut(s) 440
SmlI CTYRAG 5 cut(s) 293, 569, 634, 669, 1438
SmoI CTYRAG 5 cut(s) 293, 569, 634, 669, 1438
Sse9I AATT 6 cut(s) 817, 886, 1208, 1412, 1606, 1740
SseBI AGGCCT 1 cut(s) 1060
SspDI GGCGCC 2 cut(s) 467, 905
SspMI CTAG 1 cut(s) 1487
SstI GAGCTC 1 cut(s) 1133
StuI AGGCCT 1 cut(s) 1060
StyD4I CCNGG 5 cut(s) 470, 990, 1003, 1222, 1719
StyI CCWWGG 5 cut(s) 60, 549, 958, 1735, 1761
TaaI ACNGT 2 cut(s) 464, 616
TaiI ACGT 7 cut(s) 30, 57, 531, 612, 837, 1044, 1776
TaqI TCGA 7 cut(s) 294, 456, 531, 570, 815, 884, 1514
TaqII GACCGA 1 cut(s) 590
TasI AATT 6 cut(s) 817, 886, 1208, 1412, 1606, 1740
TatI WGTACW 1 cut(s) 1260
TfiI GAWTC 4 cut(s) 351, 1000, 1390, 1638
TscAI CASTG 4 cut(s) 119, 425, 784, 1141
TspDTI ATGAA 7 cut(s) 163, 215, 439, 1103, 1185, 1328, 1334
TspGWI ACGGA 3 cut(s) 70, 307, 1603
TspRI CASTG 4 cut(s) 119, 425, 784, 1141
Tth111I GACNNNGTC 1 cut(s) 856
VpaK11BI GGWCC 5 cut(s) 267, 300, 400, 825, 1649
XapI RAATTY 2 cut(s) 817, 1606
XbaI TCTAGA 1 cut(s) 1486
XceI RCATGY 3 cut(s) 1602, 1709, 1816
XhoI CTCGAG 2 cut(s) 293, 569
XmiI GTMKAC 2 cut(s) 531, 1842
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 1 cut(s) 1487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.