MD06G1226800.v1.1

May act as a component of the auxin efflux carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0002064
Physical Location & Seq
Reverse (-)
35755661 .. 35759407
3747 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1226800.v1.1.491

Sequence Viewer

Length: 1863 bp
ATGATTACATTATCCGACTTCTACCACGTCATGACGGCGGTGGTGCCGCTCTACGTGGCCATGATCTTGGCCTACGGCTCCGTGAAGTGGTGGAAGATCTTCACCCCCGACCAGTGCTCCGGCATCAACCGCTTCGTCGCCCTCTTCGCCGTCCCCCTCCTCTCCTTCCACTTCATCTCCACCAACGACCCTTACAACATGAACACCCGCTTCATTGCCGCCGACACCCTCCAGAAGCTCATCGTCCTCGCCGTCCTCGGCGTCTGGACCAAAGTCAGCAAAAGGGGATGCCTGGAATGGACGATCACTCTCTTCTCCGTCTCCACTCTGCCCAACACTCTGGTCATGGGAATCCCATTGCTCAAGGGAATGTACGGCGATTTTTCCGGGAGTTTGATGGTGCAGATCGTCGTCCTCCAGTGCATTATCTGGTACACTTTGATGCTTTTCATGTTCGAATACCGAGGAGCAAGACTCCTCATCTCGGAGCAGTTTCCCGACACTGCGGGATCCATTGTCTCCATCCACGTCGACTCCGATATTATGTCGCTCGACGGAAGACAGCCCCTCGAGACTGAAGCGGAGATCAAGGAGGACGGCAAACTCCACGTCACTGTCAGAAAATCAAACGCTTCGCGCTCGGATATTTTATCGCGGCGATCTCAGGGGCTGTCGTCCACCACCCCGCGGCCGTCGAATCTCACTAATGCGGAGATTTACTCCCTGCAGTCTTCGAGAAATCCGACGCCGAGAGGGTCAAGTTTCAACCACACGGACTTCTACTCCATGATGGCTGCCGGAAGGAACTCGAATTTCGGAGCTAACGATGTTTATGGGATGTCTGCGTCCAGAGGGCCGACTCCACGGCCATCAAATTTCGAGGAAGACGGTGGCGGCGGCGCTGTCAGCTCCGCTACTGGAAATAAGCCACGGTTTTACCACGGCGGACAGAATAATGCAGTGGCGCATTACCCGGCCCCAAACCCAGGGATGTTTTCTCCGACGGCGTCCAGAACCGTCACCGCTAATGCTAATAGCAATGCCATGAATGCAAAGAGAGCTAATGGGCAAGCTCAGAAAACAGAGGACACCAATGGCGGGAAGGATCTTCATATGTTTGTTTGGAGCTCAAGTGCTTCTCCTGTTTCAGATGTGTTTGGAAGCAATGAATACGGTGGTGCTGCCCATGATCACAAAGAAGTAAAATTGGCTGTGTCTCCAGGAAAAGTGGAGGGGAGGAGAGAGAATCAGGAAGAGTATTTGGAGAGAGAAGATTTCAGATTTGGAAACAGAGATCAGATGAACATGAACAATGAGGCTGAGAAAGGAGGGGATGGGATTGGAAAAGCCAAAGTGATGCCTCCAACAAGTGTGATGACAAGGCTAATTCTCATCATGGTTTGGAGAAAACTCATTAGAAACCCAAACACTTACTCCAGCTTGATCGGCCTCACTTGGTCTCTAGTCTCATTCAGGTGGCACGTTCAAATGCCAGCCATTGTAGCGAAGTCCATCGCCATACTATCTGATGCAGGACTTGGCATGGCCATGTTCAGCCTCGGTTTGTTTATGGCTTTGCAGCCAAAGATCATAGCTTGTGGAAACTCCGTTGCAGCTTTTGCCATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGCTTAAGAGGCACTCTCTTACATGTTGCCATTGTACAGGCAGCCCTACCCCAAGGAATTGTTCCCTTTGTCTTTGCCAAGGAATACAATGTACACCCTGATATTCTCAGCACGGGGGTTATATTTGGAATGTTGATTGCGTTGCCCATAACGCTTGTTTACTACATTTTGTTGGGGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005911 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009314 GO:0009416 GO:0009505 GO:0009506 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009914 GO:0009921 GO:0009925 GO:0009926 GO:0009965 GO:0009966 GO:0009987 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010229 GO:0010252 GO:0010315 GO:0010329 GO:0010338 GO:0010358 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0016021 GO:0016323 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0023052 GO:0030054 GO:0030312 GO:0031224 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045177 GO:0045178 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048532 GO:0048583 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048830 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0080161 GO:0090567 GO:0090698 GO:0098590 GO:0098796 GO:0098797 GO:0099402 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mem_trans

Protein Analysis

621

Amino Acids

67.58

Weight (kDa)

9.11

Isoelectric Point (pI)

34.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mem_trans PF03547 9 - 615 1.2e-130 Membrane transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 43
AccBSI CCGCTC 1 cut(s) 49
AccI GTMKAC 1 cut(s) 531
AccII CGCG 3 cut(s) 637, 655, 688
AclWI GGATC 3 cut(s) 504, 517, 1113
AcoI YGGCCR 4 cut(s) 57, 689, 866, 1545
AcsI RAATTY 2 cut(s) 811, 874
AcuI CTGAAG 1 cut(s) 597
AcyI GRCGYC 3 cut(s) 261, 746, 1007
AfaI GTAC 4 cut(s) 374, 434, 1716, 1773
AfiI CCNNNNNNNGG 5 cut(s) 87, 484, 687, 986, 1098
AflII CTTAAG 1 cut(s) 1684
AflIII ACRYGT 1 cut(s) 1702
AgsI TTSAA 2 cut(s) 766, 1487
AjiI CACGTC 3 cut(s) 28, 529, 610
AjnI CCWGG 3 cut(s) 291, 985, 1219
AjuI GAANNNNNNNTTGG 2 cut(s) 1725, 1757
Alw21I GWGCWC 2 cut(s) 119, 1130
Alw26I GTCTC 6 cut(s) 325, 523, 566, 1221, 1464, 1471
AlwI GGATC 3 cut(s) 504, 517, 1113
AlwNI CAGNNNCTG 1 cut(s) 670
Ama87I CYCGRG 1 cut(s) 569
AoxI GGCC 8 cut(s) 57, 69, 689, 854, 866, 975, 1447, 1545
ApeKI GCWGC 7 cut(s) 794, 1181, 1579, 1613, 1661, 1664, 1721
ApoI RAATTY 2 cut(s) 811, 874
ArsI GACNNNNNNTTYG 2 cut(s) 594, 626
Asp700I GAANNNNTTC 1 cut(s) 98
AspLEI GCGC 3 cut(s) 639, 902, 967
AspS9I GGNCC 4 cut(s) 267, 854, 976, 1646
AsuC2I CCSGG 2 cut(s) 388, 974
AsuHPI GGTGA 2 cut(s) 94, 1012
AsuII TTCGAA 1 cut(s) 456
AvaI CYCGRG 1 cut(s) 569
AvaII GGWCC 2 cut(s) 267, 1646
BalI TGGCCA 2 cut(s) 59, 1547
BamHI GGATCC 1 cut(s) 509
BanI GGYRCC 1 cut(s) 43
BanII GRGCYC 1 cut(s) 1130
BbsI GAAGAC 3 cut(s) 565, 723, 891
Bbv12I GWGCWC 2 cut(s) 119, 1130
BbvI GCAGC 7 cut(s) 781, 1168, 1591, 1625, 1651, 1673, 1733
BccI CCATC 6 cut(s) 391, 530, 784, 877, 1328, 1520
BciT130I CCWGG 3 cut(s) 293, 987, 1221
BclI TGATCA 1 cut(s) 1189
BcnI CCSGG 2 cut(s) 388, 974
BcoDI GTCTC 6 cut(s) 325, 523, 566, 1221, 1464, 1471
BfaI CTAG 1 cut(s) 1463
BfmI CTRYAG 1 cut(s) 725
BfoI RGCGCY 1 cut(s) 903
BfrI CTTAAG 1 cut(s) 1684
BglII AGATCT 1 cut(s) 96
Bme1390I CCNGG 5 cut(s) 293, 388, 974, 987, 1221
Bme18I GGWCC 2 cut(s) 267, 1646
BmeT110I CYCGRG 1 cut(s) 569
BmgBI CACGTC 3 cut(s) 28, 529, 610
BmgT120I GGNCC 4 cut(s) 267, 854, 976, 1646
BmiI GGNNCC 4 cut(s) 45, 79, 511, 978
BmrFI CCNGG 5 cut(s) 293, 388, 974, 987, 1221
BmsI GCATC 5 cut(s) 132, 278, 432, 1347, 1519
BoxI GACNNNNGTC 1 cut(s) 272
BpiI GAAGAC 3 cut(s) 565, 723, 891
BplI GAGNNNNNCTC 6 cut(s) 459, 491, 704, 736, 1680, 1712
BpmI CTGGAG 4 cut(s) 215, 401, 1203, 1420
Bpu14I TTCGAA 1 cut(s) 456
BpuEI CTTGAG 2 cut(s) 347, 1114
BpuMI CCSGG 2 cut(s) 388, 974
BsaAI YACGTR 1 cut(s) 55
BsaHI GRCGYC 3 cut(s) 261, 746, 1007
BsaI GGTCTC 1 cut(s) 1464
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 484, 687, 986, 1098
Bse1I ACTGG 3 cut(s) 112, 418, 922
Bse3DI GCAATG 5 cut(s) 213, 356, 1045, 1171, 1671
BseBI CCWGG 3 cut(s) 293, 987, 1221
BseGI GGATG 5 cut(s) 293, 522, 843, 996, 1339
BseLI CCNNNNNNNGG 5 cut(s) 87, 484, 687, 986, 1098
BseMI GCAATG 5 cut(s) 213, 356, 1045, 1171, 1671
BseMII CTCAG 4 cut(s) 677, 1088, 1311, 1801
BseNI ACTGG 3 cut(s) 112, 418, 922
BseRI GAGGAG 4 cut(s) 149, 467, 480, 1252
BseX3I CGGCCG 1 cut(s) 689
BseXI GCAGC 7 cut(s) 781, 1168, 1591, 1625, 1651, 1673, 1733
BsgI GTGCAG 1 cut(s) 422
Bsh1236I CGCG 3 cut(s) 637, 655, 688
Bsh1285I CGRYCG 1 cut(s) 692
BshFI GGCC 8 cut(s) 59, 71, 691, 856, 868, 977, 1449, 1547
BshNI GGYRCC 1 cut(s) 43
BsiEI CGRYCG 1 cut(s) 692
BsiHKAI GWGCWC 2 cut(s) 119, 1130
BsiHKCI CYCGRG 1 cut(s) 569
BsiSI CCGG 4 cut(s) 120, 387, 798, 974
BslFI GGGAC 1 cut(s) 137
BslI CCNNNNNNNGG 5 cut(s) 87, 484, 687, 986, 1098
BsmAI GTCTC 6 cut(s) 325, 523, 566, 1221, 1464, 1471
BsmBI CGTCTC 1 cut(s) 325
BsmFI GGGAC 1 cut(s) 137
BsmI GAATGC 1 cut(s) 1054
BsnI GGCC 8 cut(s) 59, 71, 691, 856, 868, 977, 1449, 1547
Bso31I GGTCTC 1 cut(s) 1464
BsoBI CYCGRG 1 cut(s) 569
Bsp119I TTCGAA 1 cut(s) 456
Bsp1286I GDGCHC 2 cut(s) 119, 1130
Bsp1407I TGTACA 2 cut(s) 1714, 1771
Bsp19I CCATGG 1 cut(s) 1623
BspANI GGCC 8 cut(s) 59, 71, 691, 856, 868, 977, 1449, 1547
BspCNI CTCAG 4 cut(s) 676, 1087, 1312, 1800
BspFNI CGCG 3 cut(s) 637, 655, 688
BspHI TCATGA 1 cut(s) 30
BspLI GGNNCC 4 cut(s) 45, 79, 511, 978
BspMAI CTGCAG 1 cut(s) 729
BspPI GGATC 3 cut(s) 504, 517, 1113
BspT104I TTCGAA 1 cut(s) 456
BspT107I GGYRCC 1 cut(s) 43
BspTI CTTAAG 1 cut(s) 1684
BspTNI GGTCTC 1 cut(s) 1464
BsrBI CCGCTC 1 cut(s) 49
BsrDI GCAATG 5 cut(s) 213, 356, 1045, 1171, 1671
BsrGI TGTACA 2 cut(s) 1714, 1771
BsrI ACTGG 3 cut(s) 112, 418, 922
BssNI GRCGYC 3 cut(s) 261, 746, 1007
BssT1I CCWWGG 3 cut(s) 1623, 1732, 1758
Bst2UI CCWGG 3 cut(s) 293, 987, 1221
Bst4CI ACNGT 5 cut(s) 616, 890, 933, 1018, 1175
Bst6I CTCTTC 3 cut(s) 149, 317, 1248
BstACI GRCGYC 3 cut(s) 261, 746, 1007
BstAFI CTTAAG 1 cut(s) 1684
BstAPI GCANNNNNTGC 1 cut(s) 1619
BstAUI TGTACA 2 cut(s) 1714, 1771
BstBAI YACGTR 1 cut(s) 55
BstBI TTCGAA 1 cut(s) 456
BstC8I GCNNGC 2 cut(s) 1071, 1494
BstDEI CTNAG 4 cut(s) 663, 1074, 1320, 1787
BstDSI CCRYGG 5 cut(s) 686, 863, 929, 940, 1623
BstF5I GGATG 5 cut(s) 293, 522, 843, 996, 1339
BstFNI CGCG 3 cut(s) 637, 655, 688
BstH2I RGCGCY 1 cut(s) 903
BstHHI GCGC 3 cut(s) 639, 902, 967
BstMAI GTCTC 6 cut(s) 325, 523, 566, 1221, 1464, 1471
BstMCI CGRYCG 1 cut(s) 692
BstNI CCWGG 3 cut(s) 293, 987, 1221
BstNSI RCATGY 1 cut(s) 1706
BstPAI GACNNNNGTC 1 cut(s) 272
BstSCI CCNGG 5 cut(s) 291, 386, 972, 985, 1219
BstSFI CTRYAG 1 cut(s) 725
BstUI CGCG 3 cut(s) 637, 655, 688
BstV1I GCAGC 7 cut(s) 781, 1168, 1591, 1625, 1651, 1673, 1733
BstV2I GAAGAC 3 cut(s) 565, 723, 891
BstX2I RGATCY 3 cut(s) 96, 509, 1105
BstXI CCANNNNNNTGG 2 cut(s) 67, 340
BstYI RGATCY 3 cut(s) 96, 509, 1105
BstZI CGGCCG 1 cut(s) 689
BsuRI GGCC 8 cut(s) 59, 71, 691, 856, 868, 977, 1449, 1547
BtgI CCRYGG 5 cut(s) 686, 863, 929, 940, 1623
BtgZI GCGATG 1 cut(s) 1498
BtrI CACGTC 3 cut(s) 28, 529, 610
BtsCI GGATG 5 cut(s) 293, 522, 843, 996, 1339
BtsI GCAGTG 2 cut(s) 501, 966
BtsIMutI CAGTG 5 cut(s) 119, 425, 501, 612, 966
Cac8I GCNNGC 2 cut(s) 1071, 1494
CaiI CAGNNNCTG 1 cut(s) 670
CciI TCATGA 1 cut(s) 30
CfoI GCGC 3 cut(s) 639, 902, 967
Cfr13I GGNCC 4 cut(s) 267, 854, 976, 1646
Cfr42I CCGCGG 1 cut(s) 689
CseI GACGC 4 cut(s) 250, 754, 834, 996
Csp6I GTAC 4 cut(s) 373, 433, 1715, 1772
CviQI GTAC 4 cut(s) 373, 433, 1715, 1772
DdeI CTNAG 4 cut(s) 663, 1074, 1320, 1787
EaeI YGGCCR 4 cut(s) 57, 689, 866, 1545
EagI CGGCCG 1 cut(s) 689
Eam1104I CTCTTC 3 cut(s) 149, 317, 1248
EarI CTCTTC 3 cut(s) 149, 317, 1248
EciI GGCGGA 1 cut(s) 960
Ecl136II GAGCTC 1 cut(s) 1128
EclXI CGGCCG 1 cut(s) 689
Eco130I CCWWGG 3 cut(s) 1623, 1732, 1758
Eco24I GRGCYC 1 cut(s) 1130
Eco31I GGTCTC 1 cut(s) 1464
Eco47I GGWCC 2 cut(s) 267, 1646
Eco52I CGGCCG 1 cut(s) 689
Eco53kI GAGCTC 1 cut(s) 1128
Eco57I CTGAAG 1 cut(s) 597
Eco88I CYCGRG 1 cut(s) 569
EcoICRI GAGCTC 1 cut(s) 1128
EcoRII CCWGG 3 cut(s) 291, 985, 1219
EcoT14I CCWWGG 3 cut(s) 1623, 1732, 1758
EcoT38I GRGCYC 1 cut(s) 1130
ErhI CCWWGG 3 cut(s) 1623, 1732, 1758
Esp3I CGTCTC 1 cut(s) 325
FaqI GGGAC 1 cut(s) 137
FauI CCCGC 4 cut(s) 215, 499, 693, 1091
FauNDI CATATG 1 cut(s) 1113
FbaI TGATCA 1 cut(s) 1189
FblI GTMKAC 1 cut(s) 531
FokI GGATG 5 cut(s) 300, 509, 850, 1003, 1346
FriOI GRGCYC 1 cut(s) 1130
FspBI CTAG 1 cut(s) 1463
GlaI GCGC 3 cut(s) 638, 901, 966
GsuI CTGGAG 4 cut(s) 215, 401, 1203, 1420
HaeII RGCGCY 1 cut(s) 903
HaeIII GGCC 8 cut(s) 59, 71, 691, 856, 868, 977, 1449, 1547
HapII CCGG 4 cut(s) 120, 387, 798, 974
HgaI GACGC 4 cut(s) 250, 754, 834, 996
HhaI GCGC 3 cut(s) 639, 902, 967
Hin1I GRCGYC 3 cut(s) 261, 746, 1007
Hin6I GCGC 3 cut(s) 637, 900, 965
HinP1I GCGC 3 cut(s) 637, 900, 965
HincII GTYRAC 1 cut(s) 532
HindII GTYRAC 1 cut(s) 532
HinfI GANTC 7 cut(s) 351, 474, 533, 697, 859, 1246, 1635
HpaII CCGG 4 cut(s) 120, 387, 798, 974
HphI GGTGA 2 cut(s) 94, 1012
Hpy166II GTNNAC 5 cut(s) 435, 532, 678, 1774, 1840
Hpy188III TCNNGA 9 cut(s) 31, 232, 265, 497, 571, 735, 849, 1011, 1250
Hpy8I GTNNAC 5 cut(s) 435, 532, 678, 1774, 1840
Hpy99I CGWCG 7 cut(s) 140, 413, 533, 557, 697, 748, 1006
HpyAV CCTTC 3 cut(s) 175, 795, 1096
HpyCH4III ACNGT 5 cut(s) 616, 890, 933, 1018, 1175
HpyCH4IV ACGT 5 cut(s) 27, 54, 528, 609, 1482
HpyCH4V TGCA 8 cut(s) 403, 423, 727, 959, 1052, 1532, 1579, 1613
HpyF3I CTNAG 4 cut(s) 663, 1074, 1320, 1787
HpySE526I ACGT 5 cut(s) 27, 54, 528, 609, 1482
Hsp92I GRCGYC 3 cut(s) 261, 746, 1007
HspAI GCGC 3 cut(s) 637, 900, 965
Ksp22I TGATCA 1 cut(s) 1189
KspI CCGCGG 1 cut(s) 689
LmnI GCTCC 7 cut(s) 83, 122, 467, 487, 818, 914, 1125
Lsp1109I GCAGC 7 cut(s) 781, 1168, 1591, 1625, 1651, 1673, 1733
LweI GCATC 5 cut(s) 132, 278, 432, 1347, 1519
MaeI CTAG 1 cut(s) 1463
MaeII ACGT 5 cut(s) 27, 54, 528, 609, 1482
MaeIII GTNAC 2 cut(s) 610, 1018
MbiI CCGCTC 1 cut(s) 49
MflI RGATCY 3 cut(s) 96, 509, 1105
MhlI GDGCHC 2 cut(s) 119, 1130
MlsI TGGCCA 2 cut(s) 59, 1547
MluCI AATT 5 cut(s) 811, 874, 1205, 1386, 1737
MluNI TGGCCA 2 cut(s) 59, 1547
MlyI GAGTC 3 cut(s) 468, 527, 853
MmeI TCCRAC 4 cut(s) 39, 767, 1025, 1388
Mox20I TGGCCA 2 cut(s) 59, 1547
MroXI GAANNNNTTC 1 cut(s) 98
MscI TGGCCA 2 cut(s) 59, 1547
MseI TTAA 1 cut(s) 1685
MslI CAYNNNNRTG 4 cut(s) 440, 1474, 1547, 1628
Msp20I TGGCCA 2 cut(s) 59, 1547
MspA1I CMGCKG 3 cut(s) 688, 1652, 1664
MspCI CTTAAG 1 cut(s) 1684
MspI CCGG 4 cut(s) 120, 387, 798, 974
MspR9I CCNGG 5 cut(s) 293, 388, 974, 987, 1221
Mva1269I GAATGC 1 cut(s) 1054
MvaI CCWGG 3 cut(s) 293, 987, 1221
MvnI CGCG 3 cut(s) 637, 655, 688
NciI CCSGG 2 cut(s) 388, 974
NcoI CCATGG 1 cut(s) 1623
NdeI CATATG 1 cut(s) 1113
NlaIV GGNNCC 4 cut(s) 45, 79, 511, 978
NmeAIII GCCGAG 2 cut(s) 237, 774
NmuCI GTSAC 2 cut(s) 610, 1018
NspI RCATGY 1 cut(s) 1706
NspV TTCGAA 1 cut(s) 456
PaeR7I CTCGAG 1 cut(s) 569
PagI TCATGA 1 cut(s) 30
PasI CCCWGGG 1 cut(s) 986
PciI ACATGT 1 cut(s) 1702
PcsI WCGNNNNNNNCGW 4 cut(s) 249, 534, 740, 822
PctI GAATGC 1 cut(s) 1054
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 4 cut(s) 351, 697, 1246, 1635
PflFI GACNNNGTC 1 cut(s) 1006
PfoI TCCNGGA 2 cut(s) 386, 1219
PleI GAGTC 3 cut(s) 468, 527, 853
PpsI GAGTC 3 cut(s) 468, 527, 853
Ppu21I YACGTR 1 cut(s) 55
PscI ACATGT 1 cut(s) 1702
PshAI GACNNNNGTC 1 cut(s) 272
Psp124BI GAGCTC 1 cut(s) 1130
Psp6I CCWGG 3 cut(s) 291, 985, 1219
PspGI CCWGG 3 cut(s) 291, 985, 1219
PspN4I GGNNCC 4 cut(s) 45, 79, 511, 978
PspPI GGNCC 4 cut(s) 267, 854, 976, 1646
PstI CTGCAG 1 cut(s) 729
PstNI CAGNNNCTG 1 cut(s) 670
PsuI RGATCY 3 cut(s) 96, 509, 1105
PsyI GACNNNGTC 1 cut(s) 1006
PvuII CAGCTG 2 cut(s) 1652, 1664
RsaI GTAC 4 cut(s) 374, 434, 1716, 1773
RsaNI GTAC 4 cut(s) 373, 433, 1715, 1772
RseI CAYNNNNRTG 4 cut(s) 440, 1474, 1547, 1628
SacI GAGCTC 1 cut(s) 1130
SacII CCGCGG 1 cut(s) 689
SalI GTCGAC 1 cut(s) 530
SaqAI TTAA 1 cut(s) 1685
Sau96I GGNCC 4 cut(s) 267, 854, 976, 1646
SchI GAGTC 3 cut(s) 468, 527, 853
ScrFI CCNGG 5 cut(s) 293, 388, 974, 987, 1221
SduI GDGCHC 2 cut(s) 119, 1130
SfaNI GCATC 5 cut(s) 132, 278, 432, 1347, 1519
SfcI CTRYAG 1 cut(s) 725
Sfr274I CTCGAG 1 cut(s) 569
Sfr303I CCGCGG 1 cut(s) 689
SfuI TTCGAA 1 cut(s) 456
SgrBI CCGCGG 1 cut(s) 689
SinI GGWCC 2 cut(s) 267, 1646
SlaI CTCGAG 1 cut(s) 569
SmiMI CAYNNNNRTG 4 cut(s) 440, 1474, 1547, 1628
SmlI CTYRAG 4 cut(s) 362, 569, 1129, 1684
SmoI CTYRAG 4 cut(s) 362, 569, 1129, 1684
Sse9I AATT 5 cut(s) 811, 874, 1205, 1386, 1737
SspMI CTAG 1 cut(s) 1463
SstI GAGCTC 1 cut(s) 1130
StyD4I CCNGG 5 cut(s) 291, 386, 972, 985, 1219
StyI CCWWGG 3 cut(s) 1623, 1732, 1758
TaaI ACNGT 5 cut(s) 616, 890, 933, 1018, 1175
TaiI ACGT 5 cut(s) 30, 57, 531, 612, 1485
TaqI TCGA 8 cut(s) 456, 531, 552, 570, 695, 734, 809, 879
TasI AATT 5 cut(s) 811, 874, 1205, 1386, 1737
TatI WGTACW 2 cut(s) 1714, 1771
TauI GCSGC 6 cut(s) 49, 221, 658, 691, 897, 900
TfiI GAWTC 4 cut(s) 351, 697, 1246, 1635
Tru1I TTAA 1 cut(s) 1685
Tru9I TTAA 1 cut(s) 1685
TscAI CASTG 5 cut(s) 119, 425, 508, 619, 966
TseFI GTSAC 2 cut(s) 610, 1018
TseI GCWGC 7 cut(s) 794, 1181, 1579, 1613, 1661, 1664, 1721
Tsp45I GTSAC 2 cut(s) 610, 1018
TspDTI ATGAA 9 cut(s) 163, 202, 215, 439, 1061, 1100, 1182, 1316, 1322
TspGWI ACGGA 5 cut(s) 70, 307, 570, 788, 1597
TspRI CASTG 5 cut(s) 119, 425, 508, 619, 966
Tth111I GACNNNGTC 1 cut(s) 1006
Vha464I CTTAAG 1 cut(s) 1684
VpaK11BI GGWCC 2 cut(s) 267, 1646
XapI RAATTY 2 cut(s) 811, 874
XceI RCATGY 1 cut(s) 1706
XhoI CTCGAG 1 cut(s) 569
XmiI GTMKAC 1 cut(s) 531
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 1 cut(s) 1463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.