pycom06g20310

May act as a component of the auxin efflux carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0002064
Physical Location & Seq
Reverse (-)
23407926 .. 23411107
3182 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g20310.4

Sequence Viewer

Length: 1863 bp
ATGATCACATTATCCGACTTCTACCACGTCATGACGGCGGTGGTGCCGCTCTACGTGGCCATGATCTTGGCCTACGGCTCCGTGAAGTGGTGGAAGATCTTCACCCCCGACCAGTGCTCCGGCATCAACCGCTTCGTCGCCCTCTTCGCCGTCCCCCTCCTCTCCTTCCACTTCATCTCCACCAACGACCCTTACAACATGAACACCCGCTTCATTGCCGCTGACACCCTCCAGAAGCTCATCGTCCTCGCCGTCCTCGGCGTCTGGACCAAAGTCAGCAAAAGGGGCTGCCTGGAATGGACGATCGATCTCTTCTCCGTCTCCACTCTGCCCAACACTCTGGTCATGGGAATCCCATTGCTCAAGGGAATGTACGGCGAATTTTCCGGGAGTTTGATGGTGCAGATCGTCGTCCTCCAGTGCATTATCTGGTACACTTTGATGCTTTTCATGTTCGAATACCGAGGAGCAAGACTCCTCATCTCCGAGCAGTTTCCCGACACGGCGGGATCCATTGTCTCCATCCACGTCGACTCCGATATTATGTCGCTCGACGGAAGACAACCCCTCGAGACTGAAGCGGAGATCAAGGAGGACGGCAAACTCCACGTCACTGTCAGAAAATCAAACGCTTCGCGGTCGGATATTTTATCGCGGCGGTCTCAGGGGCTGTCGTCCACCACCCCGCGGCCGTCGAATCTCACTAATGCGGAGATTTACTCCCTGCAGTCTTCGAGAAATCCGACGCCGAGAGGATCAAGTTTCAACCACACGGACTTCTACTCCATGATGGCTACCGGAAGGAACTCGAATTTCGGAGCTAACGATGTTTACGGGATGTCAGCGTCCAGAGGGCCGACTCCACGGCCATCAAATTTCGAGGAAGACGGTGGCGGCGGCGCTGTCAGCTCCGCTACTGGAAATAAGCCACGGTTTTACCACGGCGGACAGAATAATGCAGCGGCGCATTACCCGGCCCCAAACCCAGGGATGTTTTCTCCGACGGCGTCCAGAACCGTCACCGCTAATGCTAATAGCAATGCCATGAATGCAAAGAGAGCTAATGGGCAAGTTCAGAAAACAGAGGACAACAATGGCGGGAAGGATCTTCATATGTTTGTTTGGAGCTCAAGTGCTTCTCCTGTTTCAGATGTGTTTGGAAGCAATGAATACGGTGGTGCTGCCCATGATCACAAAGAAGTTAAATTGGCTGTGTCTCCTGGAAAAGTGGAGGGGAGGAGAGAGAATCAGGACGAGTATTTGGAGAGAGAAGATTTCAGGTTCGGAAACAGAGATCAGATGAACATGAACAATGAGGTTGAGAAAGGAGGGGATGGGATTGGAAAAGGCAAAGTGATGCCTCCAACAAGTGTGATGACAAGGCTTATTCTCATCATGGTTTGGAGAAAACTCATCAGAAACCCAAACACTTACTCCAGCTTGATCGGCCTCACTTGGTCTCTAGTCTCATTCAGGTGGCACGTTCAAATGCCAGCCATTGTAGCGAAGTCCATCGCCATACTATCTGATGCAGGACTTGGCATGGCCATGTTCAGCCTTGGTTTGTTTATGGCTTTGCAGCCAAAGATCATAGCATGTGGAAACTCCGTTGCAGCTTTTGCCATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGCTTAAGAGGCACTCTCTTACATGTTGCCATTGTACAGGCAGCCCTACCCCAAGGAATTGTTCCCTTTGTCTTTGCCAAGGAATACAATGTACACCCTGATATTCTCAGCACAGGGGTTATATTTGGAATGTTGATTGCGTTGCCCATAACGCTTGTTTACTACATTTTGTTGGGGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005911 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009314 GO:0009416 GO:0009505 GO:0009506 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009914 GO:0009921 GO:0009925 GO:0009926 GO:0009965 GO:0009966 GO:0009987 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010229 GO:0010252 GO:0010315 GO:0010329 GO:0010338 GO:0010358 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0016021 GO:0016323 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0023052 GO:0030054 GO:0030312 GO:0031224 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045177 GO:0045178 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048532 GO:0048583 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048830 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0080161 GO:0090567 GO:0090698 GO:0098590 GO:0098796 GO:0098797 GO:0099402 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mem_trans

Protein Analysis

621

Amino Acids

67.65

Weight (kDa)

9.03

Isoelectric Point (pI)

34.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 43
AccBSI CCGCTC 1 cut(s) 49
AccI GTMKAC 1 cut(s) 531
AccII CGCG 3 cut(s) 637, 655, 688
AclWI GGATC 4 cut(s) 504, 517, 763, 1113
AcoI YGGCCR 4 cut(s) 57, 689, 866, 1545
AcsI RAATTY 3 cut(s) 380, 811, 874
AcuI CTGAAG 1 cut(s) 597
AcyI GRCGYC 3 cut(s) 261, 746, 1007
AfaI GTAC 4 cut(s) 374, 434, 1716, 1773
AfiI CCNNNNNNNGG 3 cut(s) 87, 687, 986
AflII CTTAAG 1 cut(s) 1684
AflIII ACRYGT 1 cut(s) 1702
AgsI TTSAA 2 cut(s) 766, 1487
AjiI CACGTC 3 cut(s) 28, 529, 610
AjnI CCWGG 3 cut(s) 291, 985, 1219
AjuI GAANNNNNNNTTGG 2 cut(s) 1725, 1757
AluBI AGCT 9 cut(s) 238, 821, 909, 1061, 1128, 1440, 1616, 1652, 1664
AluI AGCT 9 cut(s) 238, 821, 909, 1061, 1128, 1440, 1616, 1652, 1664
Alw21I GWGCWC 2 cut(s) 119, 1130
Alw26I GTCTC 7 cut(s) 325, 523, 566, 666, 1221, 1464, 1471
AlwI GGATC 4 cut(s) 504, 517, 763, 1113
AlwNI CAGNNNCTG 1 cut(s) 670
Ama87I CYCGRG 1 cut(s) 569
AoxI GGCC 8 cut(s) 57, 69, 689, 854, 866, 975, 1447, 1545
ApeKI GCWGC 8 cut(s) 288, 959, 1181, 1579, 1613, 1661, 1664, 1721
ApoI RAATTY 3 cut(s) 380, 811, 874
ArsI GACNNNNNNTTYG 2 cut(s) 594, 626
Asp700I GAANNNNTTC 1 cut(s) 98
AspLEI GCGC 2 cut(s) 902, 967
AspS9I GGNCC 4 cut(s) 267, 854, 976, 1646
AsuC2I CCSGG 2 cut(s) 388, 974
AsuHPI GGTGA 2 cut(s) 94, 1012
AsuII TTCGAA 1 cut(s) 456
AvaI CYCGRG 1 cut(s) 569
AvaII GGWCC 2 cut(s) 267, 1646
BalI TGGCCA 2 cut(s) 59, 1547
BamHI GGATCC 1 cut(s) 509
BanI GGYRCC 1 cut(s) 43
BanII GRGCYC 1 cut(s) 1130
BbsI GAAGAC 3 cut(s) 565, 723, 891
Bbv12I GWGCWC 2 cut(s) 119, 1130
BbvI GCAGC 8 cut(s) 275, 971, 1168, 1591, 1625, 1651, 1673, 1733
BccI CCATC 6 cut(s) 391, 530, 784, 877, 1328, 1520
BciT130I CCWGG 3 cut(s) 293, 987, 1221
BclI TGATCA 2 cut(s) 3, 1189
BcnI CCSGG 2 cut(s) 388, 974
BcoDI GTCTC 7 cut(s) 325, 523, 566, 666, 1221, 1464, 1471
BfaI CTAG 1 cut(s) 1463
BfmI CTRYAG 1 cut(s) 725
BfoI RGCGCY 1 cut(s) 903
BfrI CTTAAG 1 cut(s) 1684
BglII AGATCT 1 cut(s) 96
Bme1390I CCNGG 5 cut(s) 293, 388, 974, 987, 1221
Bme18I GGWCC 2 cut(s) 267, 1646
BmeT110I CYCGRG 1 cut(s) 569
BmgBI CACGTC 3 cut(s) 28, 529, 610
BmgT120I GGNCC 4 cut(s) 267, 854, 976, 1646
BmiI GGNNCC 4 cut(s) 45, 79, 511, 978
BmrFI CCNGG 5 cut(s) 293, 388, 974, 987, 1221
BmsI GCATC 4 cut(s) 132, 432, 1347, 1519
BoxI GACNNNNGTC 1 cut(s) 272
BpiI GAAGAC 3 cut(s) 565, 723, 891
BplI GAGNNNNNCTC 6 cut(s) 459, 491, 704, 736, 1680, 1712
BpmI CTGGAG 3 cut(s) 215, 401, 1420
Bpu14I TTCGAA 1 cut(s) 456
BpuEI CTTGAG 2 cut(s) 347, 1114
BpuMI CCSGG 2 cut(s) 388, 974
Bsa29I ATCGAT 1 cut(s) 306
BsaAI YACGTR 1 cut(s) 55
BsaHI GRCGYC 3 cut(s) 261, 746, 1007
BsaI GGTCTC 2 cut(s) 666, 1464
BsaWI WCCGGW 1 cut(s) 797
Bsc4I CCNNNNNNNGG 3 cut(s) 87, 687, 986
Bse1I ACTGG 3 cut(s) 112, 418, 922
Bse3DI GCAATG 5 cut(s) 213, 356, 1045, 1171, 1671
BseBI CCWGG 3 cut(s) 293, 987, 1221
BseCI ATCGAT 1 cut(s) 306
BseGI GGATG 4 cut(s) 522, 843, 996, 1339
BseLI CCNNNNNNNGG 3 cut(s) 87, 687, 986
BseMI GCAATG 5 cut(s) 213, 356, 1045, 1171, 1671
BseMII CTCAG 2 cut(s) 677, 1801
BseNI ACTGG 3 cut(s) 112, 418, 922
BseRI GAGGAG 4 cut(s) 149, 467, 480, 1252
BseX3I CGGCCG 1 cut(s) 689
BseXI GCAGC 8 cut(s) 275, 971, 1168, 1591, 1625, 1651, 1673, 1733
BsgI GTGCAG 1 cut(s) 422
Bsh1236I CGCG 3 cut(s) 637, 655, 688
Bsh1285I CGRYCG 3 cut(s) 306, 641, 692
BshFI GGCC 8 cut(s) 59, 71, 691, 856, 868, 977, 1449, 1547
BshNI GGYRCC 1 cut(s) 43
BshVI ATCGAT 1 cut(s) 306
BsiEI CGRYCG 3 cut(s) 306, 641, 692
BsiHKAI GWGCWC 2 cut(s) 119, 1130
BsiHKCI CYCGRG 1 cut(s) 569
BsiSI CCGG 4 cut(s) 120, 387, 798, 974
BslFI GGGAC 1 cut(s) 137
BslI CCNNNNNNNGG 3 cut(s) 87, 687, 986
BsmAI GTCTC 7 cut(s) 325, 523, 566, 666, 1221, 1464, 1471
BsmBI CGTCTC 1 cut(s) 325
BsmFI GGGAC 1 cut(s) 137
BsmI GAATGC 1 cut(s) 1054
BsnI GGCC 8 cut(s) 59, 71, 691, 856, 868, 977, 1449, 1547
Bso31I GGTCTC 2 cut(s) 666, 1464
BsoBI CYCGRG 1 cut(s) 569
Bsp119I TTCGAA 1 cut(s) 456
Bsp1286I GDGCHC 2 cut(s) 119, 1130
Bsp1407I TGTACA 2 cut(s) 1714, 1771
Bsp19I CCATGG 1 cut(s) 1623
BspANI GGCC 8 cut(s) 59, 71, 691, 856, 868, 977, 1449, 1547
BspCNI CTCAG 2 cut(s) 676, 1800
BspDI ATCGAT 1 cut(s) 306
BspFNI CGCG 3 cut(s) 637, 655, 688
BspHI TCATGA 1 cut(s) 30
BspLI GGNNCC 4 cut(s) 45, 79, 511, 978
BspMAI CTGCAG 1 cut(s) 729
BspPI GGATC 4 cut(s) 504, 517, 763, 1113
BspT104I TTCGAA 1 cut(s) 456
BspT107I GGYRCC 1 cut(s) 43
BspTI CTTAAG 1 cut(s) 1684
BspTNI GGTCTC 2 cut(s) 666, 1464
BsrBI CCGCTC 1 cut(s) 49
BsrDI GCAATG 5 cut(s) 213, 356, 1045, 1171, 1671
BsrGI TGTACA 2 cut(s) 1714, 1771
BsrI ACTGG 3 cut(s) 112, 418, 922
BssNI GRCGYC 3 cut(s) 261, 746, 1007
BssT1I CCWWGG 4 cut(s) 1558, 1623, 1732, 1758
Bst2UI CCWGG 3 cut(s) 293, 987, 1221
Bst4CI ACNGT 5 cut(s) 616, 890, 933, 1018, 1175
Bst6I CTCTTC 2 cut(s) 149, 317
BstACI GRCGYC 3 cut(s) 261, 746, 1007
BstAFI CTTAAG 1 cut(s) 1684
BstAPI GCANNNNNTGC 1 cut(s) 1619
BstAUI TGTACA 2 cut(s) 1714, 1771
BstBAI YACGTR 1 cut(s) 55
BstBI TTCGAA 1 cut(s) 456
BstC8I GCNNGC 1 cut(s) 1494
BstDEI CTNAG 2 cut(s) 663, 1787
BstDSI CCRYGG 5 cut(s) 686, 863, 929, 940, 1623
BstF5I GGATG 4 cut(s) 522, 843, 996, 1339
BstFNI CGCG 3 cut(s) 637, 655, 688
BstH2I RGCGCY 1 cut(s) 903
BstHHI GCGC 2 cut(s) 902, 967
BstMAI GTCTC 7 cut(s) 325, 523, 566, 666, 1221, 1464, 1471
BstMCI CGRYCG 3 cut(s) 306, 641, 692
BstNI CCWGG 3 cut(s) 293, 987, 1221
BstNSI RCATGY 2 cut(s) 1599, 1706
BstPAI GACNNNNGTC 1 cut(s) 272
BstSCI CCNGG 5 cut(s) 291, 386, 972, 985, 1219
BstSFI CTRYAG 1 cut(s) 725
BstUI CGCG 3 cut(s) 637, 655, 688
BstV1I GCAGC 8 cut(s) 275, 971, 1168, 1591, 1625, 1651, 1673, 1733
BstV2I GAAGAC 3 cut(s) 565, 723, 891
BstX2I RGATCY 3 cut(s) 96, 509, 1105
BstXI CCANNNNNNTGG 2 cut(s) 67, 340
BstYI RGATCY 3 cut(s) 96, 509, 1105
BstZI CGGCCG 1 cut(s) 689
Bsu15I ATCGAT 1 cut(s) 306
BsuRI GGCC 8 cut(s) 59, 71, 691, 856, 868, 977, 1449, 1547
BsuTUI ATCGAT 1 cut(s) 306
BtgI CCRYGG 5 cut(s) 686, 863, 929, 940, 1623
BtgZI GCGATG 1 cut(s) 1498
BtrI CACGTC 3 cut(s) 28, 529, 610
BtsCI GGATG 4 cut(s) 522, 843, 996, 1339
BtsIMutI CAGTG 3 cut(s) 119, 425, 612
Cac8I GCNNGC 1 cut(s) 1494
CaiI CAGNNNCTG 1 cut(s) 670
CciI TCATGA 1 cut(s) 30
CfoI GCGC 2 cut(s) 902, 967
Cfr13I GGNCC 4 cut(s) 267, 854, 976, 1646
Cfr42I CCGCGG 1 cut(s) 689
ClaI ATCGAT 1 cut(s) 306
CseI GACGC 4 cut(s) 250, 754, 834, 996
Csp6I GTAC 4 cut(s) 373, 433, 1715, 1772
CviQI GTAC 4 cut(s) 373, 433, 1715, 1772
DdeI CTNAG 2 cut(s) 663, 1787
EaeI YGGCCR 4 cut(s) 57, 689, 866, 1545
EagI CGGCCG 1 cut(s) 689
Eam1104I CTCTTC 2 cut(s) 149, 317
EarI CTCTTC 2 cut(s) 149, 317
EciI GGCGGA 1 cut(s) 960
Ecl136II GAGCTC 1 cut(s) 1128
EclXI CGGCCG 1 cut(s) 689
Eco130I CCWWGG 4 cut(s) 1558, 1623, 1732, 1758
Eco24I GRGCYC 1 cut(s) 1130
Eco31I GGTCTC 2 cut(s) 666, 1464
Eco47I GGWCC 2 cut(s) 267, 1646
Eco52I CGGCCG 1 cut(s) 689
Eco53kI GAGCTC 1 cut(s) 1128
Eco57I CTGAAG 1 cut(s) 597
Eco88I CYCGRG 1 cut(s) 569
EcoICRI GAGCTC 1 cut(s) 1128
EcoRII CCWGG 3 cut(s) 291, 985, 1219
EcoT14I CCWWGG 4 cut(s) 1558, 1623, 1732, 1758
EcoT38I GRGCYC 1 cut(s) 1130
ErhI CCWWGG 4 cut(s) 1558, 1623, 1732, 1758
Esp3I CGTCTC 1 cut(s) 325
FaqI GGGAC 1 cut(s) 137
FauI CCCGC 4 cut(s) 215, 499, 693, 1091
FauNDI CATATG 1 cut(s) 1113
FbaI TGATCA 2 cut(s) 3, 1189
FblI GTMKAC 1 cut(s) 531
FokI GGATG 4 cut(s) 509, 850, 1003, 1346
FriOI GRGCYC 1 cut(s) 1130
FspBI CTAG 1 cut(s) 1463
GlaI GCGC 2 cut(s) 901, 966
GsuI CTGGAG 3 cut(s) 215, 401, 1420
HaeII RGCGCY 1 cut(s) 903
HaeIII GGCC 8 cut(s) 59, 71, 691, 856, 868, 977, 1449, 1547
HapII CCGG 4 cut(s) 120, 387, 798, 974
HgaI GACGC 4 cut(s) 250, 754, 834, 996
HhaI GCGC 2 cut(s) 902, 967
Hin1I GRCGYC 3 cut(s) 261, 746, 1007
Hin6I GCGC 2 cut(s) 900, 965
HinP1I GCGC 2 cut(s) 900, 965
HincII GTYRAC 1 cut(s) 532
HindII GTYRAC 1 cut(s) 532
HinfI GANTC 7 cut(s) 351, 474, 533, 697, 859, 1246, 1635
HpaII CCGG 4 cut(s) 120, 387, 798, 974
HphI GGTGA 2 cut(s) 94, 1012
Hpy166II GTNNAC 6 cut(s) 435, 532, 678, 832, 1774, 1840
Hpy188III TCNNGA 9 cut(s) 31, 232, 265, 497, 571, 735, 849, 1011, 1250
Hpy8I GTNNAC 6 cut(s) 435, 532, 678, 832, 1774, 1840
Hpy99I CGWCG 7 cut(s) 140, 413, 533, 557, 697, 748, 1006
HpyAV CCTTC 3 cut(s) 175, 795, 1096
HpyCH4III ACNGT 5 cut(s) 616, 890, 933, 1018, 1175
HpyCH4IV ACGT 5 cut(s) 27, 54, 528, 609, 1482
HpyCH4V TGCA 8 cut(s) 403, 423, 727, 959, 1052, 1532, 1579, 1613
HpyF3I CTNAG 2 cut(s) 663, 1787
HpySE526I ACGT 5 cut(s) 27, 54, 528, 609, 1482
Hsp92I GRCGYC 3 cut(s) 261, 746, 1007
HspAI GCGC 2 cut(s) 900, 965
Ksp22I TGATCA 2 cut(s) 3, 1189
KspI CCGCGG 1 cut(s) 689
LmnI GCTCC 6 cut(s) 83, 122, 467, 818, 914, 1125
Lsp1109I GCAGC 8 cut(s) 275, 971, 1168, 1591, 1625, 1651, 1673, 1733
LweI GCATC 4 cut(s) 132, 432, 1347, 1519
MaeI CTAG 1 cut(s) 1463
MaeII ACGT 5 cut(s) 27, 54, 528, 609, 1482
MaeIII GTNAC 2 cut(s) 610, 1018
MbiI CCGCTC 1 cut(s) 49
MboII GAAGA 9 cut(s) 91, 106, 136, 304, 570, 723, 896, 1100, 1283
MflI RGATCY 3 cut(s) 96, 509, 1105
MhlI GDGCHC 2 cut(s) 119, 1130
MlsI TGGCCA 2 cut(s) 59, 1547
MluCI AATT 5 cut(s) 380, 811, 874, 1205, 1737
MluNI TGGCCA 2 cut(s) 59, 1547
MlyI GAGTC 3 cut(s) 468, 527, 853
MmeI TCCRAC 5 cut(s) 39, 621, 767, 1025, 1388
Mox20I TGGCCA 2 cut(s) 59, 1547
MroXI GAANNNNTTC 1 cut(s) 98
MscI TGGCCA 2 cut(s) 59, 1547
MseI TTAA 2 cut(s) 1203, 1685
MslI CAYNNNNRTG 4 cut(s) 440, 1474, 1547, 1628
Msp20I TGGCCA 2 cut(s) 59, 1547
MspA1I CMGCKG 5 cut(s) 221, 688, 962, 1652, 1664
MspCI CTTAAG 1 cut(s) 1684
MspI CCGG 4 cut(s) 120, 387, 798, 974
MspR9I CCNGG 5 cut(s) 293, 388, 974, 987, 1221
Mva1269I GAATGC 1 cut(s) 1054
MvaI CCWGG 3 cut(s) 293, 987, 1221
MvnI CGCG 3 cut(s) 637, 655, 688
NciI CCSGG 2 cut(s) 388, 974
NcoI CCATGG 1 cut(s) 1623
NdeI CATATG 1 cut(s) 1113
NlaIV GGNNCC 4 cut(s) 45, 79, 511, 978
NmeAIII GCCGAG 2 cut(s) 237, 774
NmuCI GTSAC 2 cut(s) 610, 1018
NspI RCATGY 2 cut(s) 1599, 1706
NspV TTCGAA 1 cut(s) 456
PaeR7I CTCGAG 1 cut(s) 569
PagI TCATGA 1 cut(s) 30
PasI CCCWGGG 1 cut(s) 986
PciI ACATGT 1 cut(s) 1702
PcsI WCGNNNNNNNCGW 4 cut(s) 249, 534, 740, 822
PctI GAATGC 1 cut(s) 1054
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 4 cut(s) 351, 697, 1246, 1635
PflFI GACNNNGTC 1 cut(s) 1006
PfoI TCCNGGA 2 cut(s) 386, 1219
Ple19I CGATCG 1 cut(s) 306
PleI GAGTC 3 cut(s) 468, 527, 853
PpsI GAGTC 3 cut(s) 468, 527, 853
Ppu21I YACGTR 1 cut(s) 55
PscI ACATGT 1 cut(s) 1702
PshAI GACNNNNGTC 1 cut(s) 272
Psp124BI GAGCTC 1 cut(s) 1130
Psp6I CCWGG 3 cut(s) 291, 985, 1219
PspGI CCWGG 3 cut(s) 291, 985, 1219
PspN4I GGNNCC 4 cut(s) 45, 79, 511, 978
PspPI GGNCC 4 cut(s) 267, 854, 976, 1646
PstI CTGCAG 1 cut(s) 729
PstNI CAGNNNCTG 1 cut(s) 670
PsuI RGATCY 3 cut(s) 96, 509, 1105
PsyI GACNNNGTC 1 cut(s) 1006
PvuI CGATCG 1 cut(s) 306
PvuII CAGCTG 2 cut(s) 1652, 1664
RsaI GTAC 4 cut(s) 374, 434, 1716, 1773
RsaNI GTAC 4 cut(s) 373, 433, 1715, 1772
RseI CAYNNNNRTG 4 cut(s) 440, 1474, 1547, 1628
SacI GAGCTC 1 cut(s) 1130
SacII CCGCGG 1 cut(s) 689
SalI GTCGAC 1 cut(s) 530
SaqAI TTAA 2 cut(s) 1203, 1685
Sau96I GGNCC 4 cut(s) 267, 854, 976, 1646
SchI GAGTC 3 cut(s) 468, 527, 853
ScrFI CCNGG 5 cut(s) 293, 388, 974, 987, 1221
SduI GDGCHC 2 cut(s) 119, 1130
SfaNI GCATC 4 cut(s) 132, 432, 1347, 1519
SfcI CTRYAG 1 cut(s) 725
Sfr274I CTCGAG 1 cut(s) 569
Sfr303I CCGCGG 1 cut(s) 689
SfuI TTCGAA 1 cut(s) 456
SgrBI CCGCGG 1 cut(s) 689
SinI GGWCC 2 cut(s) 267, 1646
SlaI CTCGAG 1 cut(s) 569
SmiMI CAYNNNNRTG 4 cut(s) 440, 1474, 1547, 1628
SmlI CTYRAG 4 cut(s) 362, 569, 1129, 1684
SmoI CTYRAG 4 cut(s) 362, 569, 1129, 1684
Sse9I AATT 5 cut(s) 380, 811, 874, 1205, 1737
SspMI CTAG 1 cut(s) 1463
SstI GAGCTC 1 cut(s) 1130
StyD4I CCNGG 5 cut(s) 291, 386, 972, 985, 1219
StyI CCWWGG 4 cut(s) 1558, 1623, 1732, 1758
TaaI ACNGT 5 cut(s) 616, 890, 933, 1018, 1175
TaiI ACGT 5 cut(s) 30, 57, 531, 612, 1485
TaqI TCGA 9 cut(s) 306, 456, 531, 552, 570, 695, 734, 809, 879
TasI AATT 5 cut(s) 380, 811, 874, 1205, 1737
TatI WGTACW 2 cut(s) 1714, 1771
TauI GCSGC 7 cut(s) 49, 221, 658, 691, 897, 900, 965
TfiI GAWTC 4 cut(s) 351, 697, 1246, 1635
Tru1I TTAA 2 cut(s) 1203, 1685
Tru9I TTAA 2 cut(s) 1203, 1685
TscAI CASTG 3 cut(s) 119, 425, 619
TseFI GTSAC 2 cut(s) 610, 1018
TseI GCWGC 8 cut(s) 288, 959, 1181, 1579, 1613, 1661, 1664, 1721
Tsp45I GTSAC 2 cut(s) 610, 1018
TspDTI ATGAA 9 cut(s) 163, 202, 215, 439, 1061, 1100, 1182, 1316, 1322
TspGWI ACGGA 5 cut(s) 70, 307, 570, 788, 1597
TspRI CASTG 3 cut(s) 119, 425, 619
Tth111I GACNNNGTC 1 cut(s) 1006
Vha464I CTTAAG 1 cut(s) 1684
VpaK11BI GGWCC 2 cut(s) 267, 1646
XapI RAATTY 3 cut(s) 380, 811, 874
XceI RCATGY 2 cut(s) 1599, 1706
XhoI CTCGAG 1 cut(s) 569
XmiI GTMKAC 1 cut(s) 531
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 1 cut(s) 1463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.