RLG00000005446

May act as a component of the auxin efflux carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0002064
Physical Location & Seq
Forward (+)
67697792 .. 67700879
3088 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005446

Sequence Viewer

Length: 1857 bp
ATGATCACATTATCCGACTTCTACCACGTCATGACGGCGGTGGTTCCGCTATACGTGGCCATGGTCTTGGCCTACGGCTCCGTCAAGTGGTGGAAGATCTTCACCCCCGACCAGTGCTCCGGCATCAACCGGTTCGTCGCCCTCTTCGCCGTTCCCTTACTCTCCTTCCACTTCATCTCCTCCAACAACCCCTACGCCATGAACACCCGCTTCCTCGCCGCCGACACTCTCCAGAAGCTGATCGTCCTCGCCGTCCTCGCCGTCTGGTCCAAAGTCAGCAAACGCGGCTGCCTCGAGTGGACCATCACCCTCTTCTCCGTCTCCACTCTCCCCAACACCCTCGTCATGGGAATCCCGCTCCTCAAAGGAATGTACGGCGACTTCTCCGGCAGCCTCATGGTCCAAATCGTCGTCCTCCAGTGCATTATCTGGTACACATTAATGCTCTTCATGTTCGAATACCGCGGCGCCCGGCTCCTCATCTCCGAGCAGTTCCCCGACACCGCTGGCTCCATCGTCTCCATCCACGTCGACTCCGATATCATGTCCTTGGACGGCAGACAACCTCTCGAGACCGAAGCAGAAATCAAAGAAGACGGCAAGCTCCACGTAACTGTTAGAAAATCCAACGCCTCAAGGTCTGACATTTACTCCAGAAGGTCTCATTCTCAAGGGCTCTCCTCCAATACTCCCCGCCCCTCCAATCTCACCAATGCAGAGATTTACTCGCTACAATCATCTAGAAACCCTACTCCCAGAGGTTCCAGCTTCAACCACACTGACTTTTACTCCATGATGGCCGCCGGCCGGAACTCGAATTTCGGGTCCTCCGACGTTTTCGGAGGGCCGTTGACGGCGTCGAGAGGCCCGACGCCGCGGCCGTCTAATTACGAGGACGACGGCGGCGCCGCCGTGGGTGCTGCTGCAGCTGGCAGCAACAAGCCGAGGTATCATTACCAAGGAGGAGGGAACAATACAACAGCGCATTACCCGGCGCCGAATCCGGGAATGTTCTCGCCTACCACGGCGGCCTCTAAGAACGTTGTCGCTCCCAAGAGGCCTAATGGAAATGGGCCGGCGGCTCAGGACGGCGGTAGGGATCTTCATATGTTTGTCTGGAGCTCCAGTGCTTCTCCTGTTTCTGATGTGTTTGGTAGCAATGAATATGGGGCCGCTGGTCATGATCAGAAAGAAGTCAAATTGGCCGTTTCTCCGGGGAAAGTGGAGGGTAGAAGAGAGAACCAAGAAGAGTACATGGTGGAGAGAGATGAGTTCAGCTTTGGGAACAGAGTCGTGGATCAGATGAACATGAATGAGGGTGAGAAAGTGGATGTGAATAAGGCCAAAGTGATGCCTCCGACGAGTGTGATGACGAGGCTGATTCTCATCATGGTCTGGAGAAAATTGATCAGAAACCCAAACACTTACTCAAGCTTGATCGGCCTCACTTGGTCTCTGGTATCCTTCAGGTGGCATCTAGAAATGCCAGCAATCATAGCAAAGTCGATAGCCATTCTATCAGACGCAGGGCTTGGAATGGCCATGTTCAGTCTTGGTCTGTTTATGGCTTTACAACCAAGGATCATAGCATGTGGAAATTCCATTGCAGCTTTTACTATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGCCTTAGGGGCACTCTCTTACATGTTGCCATTGTCCAGGCAGCTCTACCCCAAGGAATTGTCCCCTTTGTCTTTGCCAAGGAATACAACGTACACCCTGATATTCTCAGCACGGGAGTTATATTCGGCATGTTGATCGCGTTGCCCATTACGCTCGTCTACTACATATTGCTGGGGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005911 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009314 GO:0009416 GO:0009505 GO:0009506 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009914 GO:0009921 GO:0009925 GO:0009926 GO:0009965 GO:0009966 GO:0009987 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010229 GO:0010252 GO:0010315 GO:0010329 GO:0010338 GO:0010358 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0016021 GO:0016323 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0023052 GO:0030054 GO:0030312 GO:0031224 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045177 GO:0045178 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048532 GO:0048583 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048830 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0080161 GO:0090567 GO:0090698 GO:0098590 GO:0098796 GO:0098797 GO:0099402 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mem_trans

Protein Analysis

619

Amino Acids

67.3

Weight (kDa)

9.03

Isoelectric Point (pI)

35.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mem_trans PF03547 9 - 613 8.7e-131 Membrane transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 467, 905, 994
AccBSI CCGCTC 1 cut(s) 358
AccI GTMKAC 2 cut(s) 531, 1833
AccII CGCG 4 cut(s) 285, 465, 877, 1814
AclI AACGTT 1 cut(s) 1041
AclWI GGATC 3 cut(s) 1107, 1305, 1589
AcoI YGGCCR 6 cut(s) 57, 798, 805, 878, 1203, 1539
AcsI RAATTY 2 cut(s) 817, 1597
AcuI CTGAAG 1 cut(s) 1450
AcyI GRCGYC 5 cut(s) 468, 857, 872, 906, 995
AfaI GTAC 4 cut(s) 374, 434, 1253, 1767
AfiI CCNNNNNNNGG 5 cut(s) 87, 346, 807, 1004, 1470
AflIII ACRYGT 1 cut(s) 1696
AgeI ACCGGT 1 cut(s) 129
AgsI TTSAA 1 cut(s) 772
AjiI CACGTC 2 cut(s) 28, 529
AjnI CCWGG 1 cut(s) 1710
Alw21I GWGCWC 2 cut(s) 119, 1124
Alw26I GTCTC 5 cut(s) 325, 523, 566, 666, 1458
AlwI GGATC 3 cut(s) 1107, 1305, 1589
AlwNI CAGNNNCTG 1 cut(s) 238
Ama87I CYCGRG 2 cut(s) 293, 569
ApoI RAATTY 2 cut(s) 817, 1597
ArsI GACNNNNNNTTYG 2 cut(s) 809, 841
AseI ATTAAT 1 cut(s) 440
AsiGI ACCGGT 1 cut(s) 129
Asp700I GAANNNNTTC 1 cut(s) 98
AspLEI GCGC 4 cut(s) 470, 908, 985, 997
AspS9I GGNCC 9 cut(s) 267, 300, 400, 825, 845, 866, 1073, 1170, 1640
AsuC2I CCSGG 4 cut(s) 472, 992, 1005, 1215
AsuHPI GGTGA 4 cut(s) 94, 298, 700, 1331
AsuII TTCGAA 1 cut(s) 456
AvaI CYCGRG 2 cut(s) 293, 569
AvaII GGWCC 5 cut(s) 267, 300, 400, 825, 1640
AxyI CCTNAGG 1 cut(s) 1679
BaeGI GKGCMC 1 cut(s) 1688
BalI TGGCCA 2 cut(s) 59, 1541
BanI GGYRCC 3 cut(s) 467, 905, 994
BanII GRGCYC 2 cut(s) 678, 1124
BarI GAAGNNNNNNTAC 2 cut(s) 365, 397
BbsI GAAGAC 1 cut(s) 600
Bbv12I GWGCWC 2 cut(s) 119, 1124
BccI CCATC 4 cut(s) 311, 521, 530, 790
BcgI CGANNNNNNTGC 2 cut(s) 1792, 1826
BciT130I CCWGG 1 cut(s) 1712
BciVI GTATCC 1 cut(s) 1471
BclI TGATCA 3 cut(s) 3, 1183, 1407
BcnI CCSGG 4 cut(s) 472, 992, 1005, 1215
BcoDI GTCTC 5 cut(s) 325, 523, 566, 666, 1458
BfaI CTAG 2 cut(s) 741, 1478
BfmI CTRYAG 1 cut(s) 924
BfoI RGCGCY 3 cut(s) 471, 909, 998
BfuI GTATCC 1 cut(s) 1471
BglI GCCNNNNNGGC 1 cut(s) 1683
BglII AGATCT 1 cut(s) 96
Bme1390I CCNGG 5 cut(s) 472, 992, 1005, 1215, 1712
Bme18I GGWCC 5 cut(s) 267, 300, 400, 825, 1640
BmeT110I CYCGRG 2 cut(s) 293, 569
BmgBI CACGTC 2 cut(s) 28, 529
BmgT120I GGNCC 9 cut(s) 267, 300, 400, 825, 845, 866, 1073, 1170, 1640
BmrFI CCNGG 5 cut(s) 472, 992, 1005, 1215, 1712
BmsI GCATC 3 cut(s) 132, 1341, 1483
BpiI GAAGAC 1 cut(s) 600
BplI GAGNNNNNCTC 2 cut(s) 710, 742
BpmI CTGGAG 6 cut(s) 215, 401, 637, 1108, 1138, 1417
Bpu10I CCTNAGC 1 cut(s) 1083
Bpu14I TTCGAA 1 cut(s) 456
BpuEI CTTGAG 3 cut(s) 619, 654, 1414
BpuMI CCSGG 4 cut(s) 472, 992, 1005, 1215
BsaAI YACGTR 2 cut(s) 55, 610
BsaBI GATNNNNATC 1 cut(s) 1385
BsaHI GRCGYC 5 cut(s) 468, 857, 872, 906, 995
BsaI GGTCTC 3 cut(s) 566, 666, 1458
BsaWI WCCGGW 1 cut(s) 129
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 346, 807, 1004, 1470
Bse118I RCCGGY 3 cut(s) 129, 803, 1075
Bse1I ACTGG 3 cut(s) 112, 418, 1125
Bse21I CCTNAGG 1 cut(s) 1679
Bse3DI GCAATG 3 cut(s) 1165, 1602, 1665
Bse8I GATNNNNATC 1 cut(s) 1385
BseBI CCWGG 1 cut(s) 1712
BseGI GGATG 2 cut(s) 522, 1336
BseJI GATNNNNATC 1 cut(s) 1385
BseLI CCNNNNNNNGG 5 cut(s) 87, 346, 807, 1004, 1470
BseMI GCAATG 3 cut(s) 1165, 1602, 1665
BseMII CTCAG 2 cut(s) 1097, 1795
BseNI ACTGG 3 cut(s) 112, 418, 1125
BseRI GAGGAG 5 cut(s) 169, 350, 467, 670, 978
BseSI GKGCMC 1 cut(s) 1688
BseX3I CGGCCG 2 cut(s) 805, 878
BseYI CCCAGC 1 cut(s) 1846
Bsh1236I CGCG 4 cut(s) 285, 465, 877, 1814
Bsh1285I CGRYCG 2 cut(s) 808, 881
BshNI GGYRCC 3 cut(s) 467, 905, 994
BshTI ACCGGT 1 cut(s) 129
BsiEI CGRYCG 2 cut(s) 808, 881
BsiHKAI GWGCWC 2 cut(s) 119, 1124
BsiHKCI CYCGRG 2 cut(s) 293, 569
BslFI GGGAC 1 cut(s) 1721
BslI CCNNNNNNNGG 5 cut(s) 87, 346, 807, 1004, 1470
BsmAI GTCTC 5 cut(s) 325, 523, 566, 666, 1458
BsmBI CGTCTC 2 cut(s) 325, 523
BsmFI GGGAC 1 cut(s) 1721
Bso31I GGTCTC 3 cut(s) 566, 666, 1458
BsoBI CYCGRG 2 cut(s) 293, 569
Bsp119I TTCGAA 1 cut(s) 456
Bsp1286I GDGCHC 4 cut(s) 119, 678, 1124, 1688
Bsp19I CCATGG 1 cut(s) 60
BspCNI CTCAG 2 cut(s) 1096, 1794
BspFNI CGCG 4 cut(s) 285, 465, 877, 1814
BspHI TCATGA 2 cut(s) 30, 1180
BspMAI CTGCAG 1 cut(s) 928
BspPI GGATC 3 cut(s) 1107, 1305, 1589
BspQI GCTCTTC 1 cut(s) 452
BspT104I TTCGAA 1 cut(s) 456
BspT107I GGYRCC 3 cut(s) 467, 905, 994
BspTNI GGTCTC 3 cut(s) 566, 666, 1458
BsrBI CCGCTC 1 cut(s) 358
BsrDI GCAATG 3 cut(s) 1165, 1602, 1665
BsrFI RCCGGY 3 cut(s) 129, 803, 1075
BsrI ACTGG 3 cut(s) 112, 418, 1125
BssAI RCCGGY 3 cut(s) 129, 803, 1075
BssNI GRCGYC 5 cut(s) 468, 857, 872, 906, 995
BssT1I CCWWGG 6 cut(s) 60, 549, 958, 1577, 1726, 1752
Bst2UI CCWGG 1 cut(s) 1712
Bst4CI ACNGT 1 cut(s) 616
Bst6I CTCTTC 5 cut(s) 149, 317, 452, 1228, 1242
BstACI GRCGYC 5 cut(s) 468, 857, 872, 906, 995
BstBAI YACGTR 2 cut(s) 55, 610
BstBI TTCGAA 1 cut(s) 456
BstC8I GCNNGC 6 cut(s) 508, 602, 805, 931, 1077, 1488
BstDEI CTNAG 4 cut(s) 1035, 1083, 1679, 1781
BstDSI CCRYGG 5 cut(s) 60, 463, 875, 912, 1023
BstF5I GGATG 2 cut(s) 522, 1336
BstFNI CGCG 4 cut(s) 285, 465, 877, 1814
BstH2I RGCGCY 3 cut(s) 471, 909, 998
BstHHI GCGC 4 cut(s) 470, 908, 985, 997
BstMAI GTCTC 5 cut(s) 325, 523, 566, 666, 1458
BstMCI CGRYCG 2 cut(s) 808, 881
BstNI CCWGG 1 cut(s) 1712
BstNSI RCATGY 3 cut(s) 1593, 1700, 1807
BstSCI CCNGG 5 cut(s) 470, 990, 1003, 1213, 1710
BstSFI CTRYAG 1 cut(s) 924
BstSLI GKGCMC 1 cut(s) 1688
BstUI CGCG 4 cut(s) 285, 465, 877, 1814
BstV2I GAAGAC 1 cut(s) 600
BstX2I RGATCY 2 cut(s) 96, 1099
BstXI CCANNNNNNTGG 1 cut(s) 67
BstYI RGATCY 2 cut(s) 96, 1099
BstZI CGGCCG 2 cut(s) 805, 878
Bsu36I CCTNAGG 1 cut(s) 1679
BsuI GTATCC 1 cut(s) 1471
BtgI CCRYGG 5 cut(s) 60, 463, 875, 912, 1023
BtrI CACGTC 2 cut(s) 28, 529
BtsCI GGATG 2 cut(s) 522, 1336
BtsIMutI CAGTG 4 cut(s) 119, 425, 777, 1132
Cac8I GCNNGC 6 cut(s) 508, 602, 805, 931, 1077, 1488
CaiI CAGNNNCTG 1 cut(s) 238
CciI TCATGA 2 cut(s) 30, 1180
CfoI GCGC 4 cut(s) 470, 908, 985, 997
Cfr10I RCCGGY 3 cut(s) 129, 803, 1075
Cfr13I GGNCC 9 cut(s) 267, 300, 400, 825, 845, 866, 1073, 1170, 1640
Cfr42I CCGCGG 2 cut(s) 466, 878
CseI GACGC 3 cut(s) 846, 880, 1532
Csp6I GTAC 4 cut(s) 373, 433, 1252, 1766
CspAI ACCGGT 1 cut(s) 129
CviQI GTAC 4 cut(s) 373, 433, 1252, 1766
DdeI CTNAG 4 cut(s) 1035, 1083, 1679, 1781
DinI GGCGCC 3 cut(s) 469, 907, 996
EaeI YGGCCR 6 cut(s) 57, 798, 805, 878, 1203, 1539
EagI CGGCCG 2 cut(s) 805, 878
Eam1104I CTCTTC 5 cut(s) 149, 317, 452, 1228, 1242
EarI CTCTTC 5 cut(s) 149, 317, 452, 1228, 1242
Ecl136II GAGCTC 1 cut(s) 1122
EclXI CGGCCG 2 cut(s) 805, 878
Eco130I CCWWGG 6 cut(s) 60, 549, 958, 1577, 1726, 1752
Eco147I AGGCCT 1 cut(s) 1060
Eco24I GRGCYC 2 cut(s) 678, 1124
Eco31I GGTCTC 3 cut(s) 566, 666, 1458
Eco32I GATATC 1 cut(s) 541
Eco47I GGWCC 5 cut(s) 267, 300, 400, 825, 1640
Eco52I CGGCCG 2 cut(s) 805, 878
Eco53kI GAGCTC 1 cut(s) 1122
Eco57I CTGAAG 1 cut(s) 1450
Eco81I CCTNAGG 1 cut(s) 1679
Eco88I CYCGRG 2 cut(s) 293, 569
EcoICRI GAGCTC 1 cut(s) 1122
EcoO109I RGGNCCY 1 cut(s) 825
EcoRII CCWGG 1 cut(s) 1710
EcoRV GATATC 1 cut(s) 541
EcoT14I CCWWGG 6 cut(s) 60, 549, 958, 1577, 1726, 1752
EcoT38I GRGCYC 2 cut(s) 678, 1124
EgeI GGCGCC 3 cut(s) 469, 907, 996
EheI GGCGCC 3 cut(s) 469, 907, 996
ErhI CCWWGG 6 cut(s) 60, 549, 958, 1577, 1726, 1752
Esp3I CGTCTC 2 cut(s) 325, 523
FaqI GGGAC 1 cut(s) 1721
FauI CCCGC 3 cut(s) 215, 363, 701
FauNDI CATATG 1 cut(s) 1107
FbaI TGATCA 3 cut(s) 3, 1183, 1407
FblI GTMKAC 2 cut(s) 531, 1833
FokI GGATG 2 cut(s) 509, 1343
FriOI GRGCYC 2 cut(s) 678, 1124
FspBI CTAG 2 cut(s) 741, 1478
GlaI GCGC 4 cut(s) 469, 907, 984, 996
GsaI CCCAGC 1 cut(s) 1850
GsuI CTGGAG 6 cut(s) 215, 401, 637, 1108, 1138, 1417
HaeII RGCGCY 3 cut(s) 471, 909, 998
HgaI GACGC 3 cut(s) 846, 880, 1532
HhaI GCGC 4 cut(s) 470, 908, 985, 997
Hin1I GRCGYC 5 cut(s) 468, 857, 872, 906, 995
Hin6I GCGC 4 cut(s) 468, 906, 983, 995
HinP1I GCGC 4 cut(s) 468, 906, 983, 995
HincII GTYRAC 2 cut(s) 532, 852
HindII GTYRAC 2 cut(s) 532, 852
HindIII AAGCTT 1 cut(s) 1432
HinfI GANTC 6 cut(s) 351, 533, 1000, 1290, 1381, 1629
HphI GGTGA 4 cut(s) 94, 298, 700, 1331
Hpy166II GTNNAC 6 cut(s) 300, 435, 532, 852, 1768, 1834
Hpy8I GTNNAC 6 cut(s) 300, 435, 532, 852, 1768, 1834
Hpy99I CGWCG 8 cut(s) 140, 413, 533, 836, 862, 874, 902, 1363
HpyAV CCTTC 3 cut(s) 175, 651, 1474
HpyCH4III ACNGT 1 cut(s) 616
HpyCH4IV ACGT 7 cut(s) 27, 54, 528, 609, 834, 1041, 1764
HpyCH4V TGCA 4 cut(s) 423, 716, 926, 1607
HpyF3I CTNAG 4 cut(s) 1035, 1083, 1679, 1781
HpySE526I ACGT 7 cut(s) 27, 54, 528, 609, 834, 1041, 1764
Hsp92I GRCGYC 5 cut(s) 468, 857, 872, 906, 995
HspAI GCGC 4 cut(s) 468, 906, 983, 995
KasI GGCGCC 3 cut(s) 467, 905, 994
KroI GCCGGC 2 cut(s) 803, 1075
KroNI GCCGGC 2 cut(s) 805, 1077
Ksp22I TGATCA 3 cut(s) 3, 1183, 1407
KspI CCGCGG 2 cut(s) 466, 878
LguI GCTCTTC 1 cut(s) 452
LmnI GCTCC 9 cut(s) 83, 122, 363, 480, 515, 609, 1054, 1119, 1127
LweI GCATC 3 cut(s) 132, 1341, 1483
MaeI CTAG 2 cut(s) 741, 1478
MaeII ACGT 7 cut(s) 27, 54, 528, 609, 834, 1041, 1764
MaeIII GTNAC 1 cut(s) 610
MbiI CCGCTC 1 cut(s) 358
MboII GAAGA 9 cut(s) 91, 106, 136, 304, 439, 605, 1094, 1245, 1259
MflI RGATCY 2 cut(s) 96, 1099
MhlI GDGCHC 4 cut(s) 119, 678, 1124, 1688
MlsI TGGCCA 2 cut(s) 59, 1541
MluCI AATT 6 cut(s) 817, 886, 1199, 1403, 1597, 1731
MluNI TGGCCA 2 cut(s) 59, 1541
Mly113I GGCGCC 3 cut(s) 468, 906, 995
MlyI GAGTC 2 cut(s) 527, 1299
MmeI TCCRAC 5 cut(s) 39, 207, 651, 855, 1382
Mox20I TGGCCA 2 cut(s) 59, 1541
MroNI GCCGGC 2 cut(s) 803, 1075
MroXI GAANNNNTTC 1 cut(s) 98
MscI TGGCCA 2 cut(s) 59, 1541
MseI TTAA 1 cut(s) 440
MslI CAYNNNNRTG 1 cut(s) 440
Msp20I TGGCCA 2 cut(s) 59, 1541
MspA1I CMGCKG 7 cut(s) 465, 506, 877, 929, 1175, 1646, 1658
MspR9I CCNGG 5 cut(s) 472, 992, 1005, 1215, 1712
MvaI CCWGG 1 cut(s) 1712
MvnI CGCG 4 cut(s) 285, 465, 877, 1814
NaeI GCCGGC 2 cut(s) 805, 1077
NarI GGCGCC 3 cut(s) 468, 906, 995
NciI CCSGG 4 cut(s) 472, 992, 1005, 1215
NcoI CCATGG 1 cut(s) 60
NdeI CATATG 1 cut(s) 1107
NgoMIV GCCGGC 2 cut(s) 803, 1075
NmeAIII GCCGAG 1 cut(s) 969
NspI RCATGY 3 cut(s) 1593, 1700, 1807
NspV TTCGAA 1 cut(s) 456
PaeR7I CTCGAG 2 cut(s) 293, 569
PagI TCATGA 2 cut(s) 30, 1180
PceI AGGCCT 1 cut(s) 1060
PciI ACATGT 1 cut(s) 1696
PciSI GCTCTTC 1 cut(s) 452
PcsI WCGNNNNNNNCGW 5 cut(s) 249, 534, 828, 866, 878
PdiI GCCGGC 2 cut(s) 805, 1077
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 4 cut(s) 351, 1000, 1381, 1629
PflFI GACNNNGTC 1 cut(s) 856
PfoI TCCNGGA 1 cut(s) 1003
PinAI ACCGGT 1 cut(s) 129
PleI GAGTC 2 cut(s) 527, 1298
PluTI GGCGCC 3 cut(s) 471, 909, 998
PpsI GAGTC 2 cut(s) 527, 1298
Ppu21I YACGTR 2 cut(s) 55, 610
PpuMI RGGWCCY 1 cut(s) 825
PscI ACATGT 1 cut(s) 1696
PshBI ATTAAT 1 cut(s) 440
Psp124BI GAGCTC 1 cut(s) 1124
Psp1406I AACGTT 1 cut(s) 1041
Psp5II RGGWCCY 1 cut(s) 825
Psp6I CCWGG 1 cut(s) 1710
PspFI CCCAGC 1 cut(s) 1846
PspGI CCWGG 1 cut(s) 1710
PspPI GGNCC 9 cut(s) 267, 300, 400, 825, 845, 866, 1073, 1170, 1640
PspPPI RGGWCCY 1 cut(s) 825
PspXI VCTCGAGB 1 cut(s) 293
PstI CTGCAG 1 cut(s) 928
PstNI CAGNNNCTG 1 cut(s) 238
PsuI RGATCY 2 cut(s) 96, 1099
PsyI GACNNNGTC 1 cut(s) 856
PvuII CAGCTG 3 cut(s) 929, 1646, 1658
RsaI GTAC 4 cut(s) 374, 434, 1253, 1767
RsaNI GTAC 4 cut(s) 373, 433, 1252, 1766
RseI CAYNNNNRTG 1 cut(s) 440
SacI GAGCTC 1 cut(s) 1124
SacII CCGCGG 2 cut(s) 466, 878
SalI GTCGAC 1 cut(s) 530
SapI GCTCTTC 1 cut(s) 452
SaqAI TTAA 1 cut(s) 440
Sau96I GGNCC 9 cut(s) 267, 300, 400, 825, 845, 866, 1073, 1170, 1640
SchI GAGTC 2 cut(s) 527, 1299
ScrFI CCNGG 5 cut(s) 472, 992, 1005, 1215, 1712
SduI GDGCHC 4 cut(s) 119, 678, 1124, 1688
SfaNI GCATC 3 cut(s) 132, 1341, 1483
SfcI CTRYAG 1 cut(s) 924
SfoI GGCGCC 3 cut(s) 469, 907, 996
Sfr274I CTCGAG 2 cut(s) 293, 569
Sfr303I CCGCGG 2 cut(s) 466, 878
SfuI TTCGAA 1 cut(s) 456
SgrBI CCGCGG 2 cut(s) 466, 878
SinI GGWCC 5 cut(s) 267, 300, 400, 825, 1640
SlaI CTCGAG 2 cut(s) 293, 569
SmiMI CAYNNNNRTG 1 cut(s) 440
SmlI CTYRAG 5 cut(s) 293, 569, 634, 669, 1429
SmoI CTYRAG 5 cut(s) 293, 569, 634, 669, 1429
Sse9I AATT 6 cut(s) 817, 886, 1199, 1403, 1597, 1731
SseBI AGGCCT 1 cut(s) 1060
SspDI GGCGCC 3 cut(s) 467, 905, 994
SspMI CTAG 2 cut(s) 741, 1478
SstI GAGCTC 1 cut(s) 1124
StuI AGGCCT 1 cut(s) 1060
StyD4I CCNGG 5 cut(s) 470, 990, 1003, 1213, 1710
StyI CCWWGG 6 cut(s) 60, 549, 958, 1577, 1726, 1752
TaaI ACNGT 1 cut(s) 616
TaiI ACGT 7 cut(s) 30, 57, 531, 612, 837, 1044, 1767
TaqI TCGA 7 cut(s) 294, 456, 531, 570, 815, 860, 1505
TaqII GACCGA 1 cut(s) 590
TasI AATT 6 cut(s) 817, 886, 1199, 1403, 1597, 1731
TatI WGTACW 1 cut(s) 1251
TfiI GAWTC 4 cut(s) 351, 1000, 1381, 1629
Tru1I TTAA 1 cut(s) 440
Tru9I TTAA 1 cut(s) 440
TscAI CASTG 4 cut(s) 119, 425, 784, 1132
TspDTI ATGAA 7 cut(s) 163, 215, 439, 1094, 1176, 1319, 1325
TspGWI ACGGA 2 cut(s) 70, 307
TspRI CASTG 4 cut(s) 119, 425, 784, 1132
Tth111I GACNNNGTC 1 cut(s) 856
VpaK11BI GGWCC 5 cut(s) 267, 300, 400, 825, 1640
VspI ATTAAT 1 cut(s) 440
XapI RAATTY 2 cut(s) 817, 1597
XbaI TCTAGA 2 cut(s) 740, 1477
XceI RCATGY 3 cut(s) 1593, 1700, 1807
XhoI CTCGAG 2 cut(s) 293, 569
XmiI GTMKAC 2 cut(s) 531, 1833
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 2 cut(s) 741, 1478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.