FvH4_5g28950
TCP Family

T-complex protein 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0005785
Physical Location & Seq
Reverse (-)
20051104 .. 20057521
6418 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g28950.t2

Sequence Viewer

Length: 3513 bp
ATGGTCGCCGGTCTACTTTTGGATTTTCCGGCCGATGATACGCCGTCGTCTCTCTCTCCTCCAAGACTCCCCCGCAGGCTCCGACGGAGGCTCGACGAGTCCCCCAAGACTCCCAACACTGTCGAGCAAATCCAATCCAAGCTTCACCTCGCCGATCTTCGCCGCCAGGAACACTATGAGAAGTTGTCAAACAAGGCTCGCGCAAAGCCCAGAAGCCCCTCTCGATCTTCTTCTCAAGATGAAGACCTCGGTGAGCGACTCGATGCCAGGCTCCAGGCTGCTGAGAAGAAGAGGTTGCTTATTTTGGAAAATGCTCAAATGCGCTTAGCTAAGTTGGATGAATTGCGGCAAGCAGCTAAAAGTGAGGTAGAATTGCGTTTTGAGAAGGAAAGACAAAAGCTTGGTTCAAAAGTTGAATTACGTTTTCAGCAGGCAGAGGCAAATAGAATGCTTATGCTGAAGGCTTATAGACAAAGAAGGGCCAGCCTGAAGGAGAGGTCATCTCAGTCATTGTTGCGAAAGATGGCTTGGGAGAATAAGTACAAGGAGCGTGTGCGTGCTGCTATTAACCAAAAGCGTGCAGCTGCTGAGAAAAAGCGACTGGGACTTTTGGAAGAAGAAAAGAAGAGGGCATGTGCCAGGATGTTGCAAGTGCAAAGAGTAGCGAAGTCTGTCTCTCACCAACGTGAGATTGAAAGGAAGGCGAAAAGGGATCAGTTAGAAGACCGGTTGCAGAGGGCAAAGAGACAAAGAGCAGAATATCTCAAGCAAAGAGGAAAGATACAGAACTCATTTCAAGTCAGTTGGAATAGGATGCACAAACAGGCTGATCTCCTGTCTAGAAAGTTAGCAAGGTGTTGGAGACGGTTCCACAGGCTAAAGAGAACTACTTTTGCTTTGGCAAAAGCTTACAATACCTTGAAACTTGAGGAAAAGAGCGTCAAGTTAATGCCATTCGAGAAGCTTGCAATTCTGATTGAATCAACTGATACCATTCAGACTGTGAAGGCTCTACTTGATCGACTTGAGAACCGGTTGAAAGTCTCCAAGACTGTTGCCTCTATAAACTATCCATCCAGTATTGATAACATTGATCACCTGCTCAAACGAGTTGCTTCTCCCAAAAAGAGGACCACACCAAGGACATCTTTGAGAAGCAGGGAGGGAAAGAAAGCCTCTTCTGTCAGGGACACAACTAGAACTACAGCCAAATTAACAAGGTATCAAGTGAGAGTGGTTCTTTGTGCTTACATGATTTTGAGTCATCCAGATGCCGTTTTTAGTGGTCAAGGAGAGCGTGAGACTTCTCTGGCCAAATCCGCAGGAGAATTTGTAAGGGAGTTTGAGTTATTGGTCAAGACTATATTACAAGGGCCTGTCAACAGTTCTGAGGAAGAATCTGATTCCACATCACCTAAACATATAACCTTCAGATCTCAGCTAGGAGCTTTTGATAAAGCATGGTGCTCCTACTTGAGTTGCTTTGTTGCGTGGAAGGTTAAGGATGCCCAGTTGTTGGAGGGAGATTTAGTGAGAGCAGCTTGCCAGATGGAGCTGTCTATGATTCAAACTTGCAAGATGACCTCAGAAGGAGATACCGCCGATCTCACTCATGATATGAAGGCTATCCAGAAACAGGTCGCAGAAGACCAAAAGTTATTGAGAGAAAAGGTGCAACATCTCAGTGGAGAAGCTGGGATTGAGCGCATGAGATCTGCGCTATCTGAAACACGGTCCAAGTATTTTGCAGCAAAGGAAAATGGAAGTCCATCAGGTTTGCAAACGGCACAGTTAGTTCCTCCAAGCCCTCCAAGTTCTTCAGCTGGTCCTTCTGTTGGTAGCCTAGATAAGAGGAGTAGTCCAAGCCGTGTAGCTCGTTCCCTATTTCAGGAAGATGAAACTATTCTTCGGAAAGGATTAGAGTCCTCTGAGAATGGATTGATTGTGAGCGAGTCCTCTAAGACCAATTTGGGTGGGCAGCCTGGATCTTCATCCCAAAAGCTGGTCAGTGAGAATGAAATGATTGTCAATGAGTTTGTTCATGAGCAAAACCAGGCTTTTGCTAATATTTTCAATGCTGCTGATCAAGATCAAAATAATGTCCAGTCAAAGATAAGAAACACAATGGAGAAGGCTTTCTGGGATGGCGCAATGGAATCTTTAAACCAAGAAGAACCCAACTATGACCGGGTCATTCAACTCTTGGAGGAGGTGAGGGATGAAATTTGCACCATGGCTCCACAGAGCTGGAAACAAGAGATTGTTGAAGCAATTGATGTGGATATTCTTTCTCAGGTGCTAAAATCTGGTAATCTGGACATTGATTACCTGGGAAAGATCCTAGAGTTTTCAATGGTCACTTTGCGAAGGCTCTCCGCTCCAGCAAGTGATGATGAAATGACTGCCTCTCTCCAGAGTCTAAGGAAAGAATTAGATGAGATATGTAATGCTAGGGACCTGTCCAACTACTTGGGTGCTATTGCTATGATCAAGGGTCTGCGCTTTGTTCTAGAGCAGATTCAGGTGCTTAAACGAGAGATTAGCAAAGCACGTATAAGAATAATGGAGCCTTTGTTGAAGGGGCCTACTGGTTTGCAGTACCTTAGAAATGCCTTTGCCAATCGCTATGGGCCTGCCTCAGATGCCAATACTGCTCTACCACTGACACTGCAGTGGCTTTCATCTGTGTGGAATTGCAAAGATCAGGAGTGGCAAGAACATACAATGGCTTCCTCAACTTTGATGAGCAGTGATAATTCTTCTCATGAGTTTCTTCCTTCCACCACCCTTAGAAGTGGTGGAAGCTTTCTGTTGAAGCCAAACTCTTCACCTACGTCTTCTAAAGGTAATGTTCAACCAGAATGCAAGGGAGAAGGAGTTGATTTATTGGTGAGGCTTGGCTTGTTGAAGTTGGTGAGTGGTGTCTCTGGTCTGACTGAAGAAACCTTGCCTGAAACTTTTATGCTCAATCTATCTAGACTGAGGGGTATGCAGGCTCAAATTCAGAAAATTATTGTTTCTTCCATAAGCATTCTTATTTGCCGGCAAACCATCCTAAGCGAGAGGGTGATAACAAGGCCCACAGACGTGGAGGTAATACTATCAAGATGCATTGACCGGCTTCTGGGGATTTTGGACAGTGTTGAAGATGCAGGTATGGAAGAAATTGTTGAATCAATCAGTGATTTCTCCATCAATGGAAATGAAGTTGTGGACCCGGCAAAAATTCAGTCAAGAAAGATGGTTATAGCCCGGATGTTAGCTAAGAGCTTGCAAGCTGGGGATCCCGTGTTTGAGAAGGTTTCCCGTGCTGTTTATATGGCTACAAGAGGAGTGGTTCTTGGGGGCAGTGGACCGATTGGAAGAAAACTGGCCGAAACTGCACTCCGGCAAGTTGGAGCTGTGGTGCTGACCGACAGTGTGGTGGAAGCTGCTGAAGTTTTAGTTGTGGCAGCTACCATATCAGTTGGTGTTCATGGAGCATGGTACATACATATGACTGATAACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tcp11

Protein Analysis

1171

Amino Acids

131.46

Weight (kDa)

9.47

Isoelectric Point (pI)

55.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tcp11 PF05794 489 - 979 6.2e-73 T-complex protein 11
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1107
Acc36I ACCTGC 2 cut(s) 1107, 3143
AccB7I CCANNNNNTGG 2 cut(s) 1516, 2002
AccBSI CCGCTC 1 cut(s) 2378
AccI GTMKAC 1 cut(s) 13
AccII CGCG 1 cut(s) 201
AciI CCGC 6 cut(s) 73, 163, 346, 1320, 1599, 2376
AclWI GGATC 5 cut(s) 720, 1993, 2332, 3278, 3291
AcoI YGGCCR 3 cut(s) 30, 1311, 3372
AcsI RAATTY 4 cut(s) 1328, 2223, 3000, 3225
AcuI CTGAAG 6 cut(s) 479, 509, 1414, 1803, 2958, 3456
AfaI GTAC 3 cut(s) 542, 2600, 3488
AfiI CCNNNNNNNGG 8 cut(s) 1128, 1140, 1516, 1636, 1835, 1888, 2002, 3124
AflIII ACRYGT 1 cut(s) 3507
AgeI ACCGGT 2 cut(s) 726, 1032
AjiI CACGTC 1 cut(s) 3088
AjnI CCWGG 7 cut(s) 165, 266, 273, 638, 1981, 2052, 2328
AjuI GAANNNNNNNTTGG 4 cut(s) 126, 158, 511, 543
AleI CACNNNNGTG 3 cut(s) 684, 2671, 3086
Alw21I GWGCWC 1 cut(s) 1469
Alw26I GTCTC 7 cut(s) 54, 679, 739, 856, 1048, 1295, 2929
AlwI GGATC 5 cut(s) 720, 1993, 2332, 3278, 3291
AlwNI CAGNNNCTG 1 cut(s) 587
AoxI GGCC 8 cut(s) 30, 480, 1311, 1373, 2582, 2630, 3077, 3372
ApoI RAATTY 4 cut(s) 1328, 2223, 3000, 3225
ArsI GACNNNNNNTTYG 2 cut(s) 3215, 3247
AsiGI ACCGGT 2 cut(s) 726, 1032
Asp700I GAANNNNTTC 2 cut(s) 1902, 2135
AspLEI GCGC 6 cut(s) 203, 324, 1707, 1720, 2150, 2502
AsuC2I CCSGG 3 cut(s) 2189, 3218, 3253
AvaII GGWCC 6 cut(s) 1131, 1734, 1826, 2455, 3214, 3353
BalI TGGCCA 1 cut(s) 1313
BamHI GGATCC 1 cut(s) 3283
BbsI GAAGAC 4 cut(s) 249, 729, 1653, 2829
Bbv12I GWGCWC 1 cut(s) 1469
BccI CCATC 8 cut(s) 517, 1081, 1543, 1777, 2138, 3059, 3200, 3235
BceAI ACGGC 4 cut(s) 28, 1259, 1800, 1851
BcgI CGANNNNNNTGC 2 cut(s) 947, 981
BciT130I CCWGG 7 cut(s) 167, 268, 275, 640, 1983, 2054, 2330
BclI TGATCA 3 cut(s) 1093, 2083, 2487
BcnI CCSGG 3 cut(s) 2189, 3218, 3253
BcoDI GTCTC 7 cut(s) 54, 679, 739, 856, 1048, 1295, 2929
BfaI CTAG 8 cut(s) 840, 1197, 1442, 1844, 2342, 2451, 2510, 2976
BfmI CTRYAG 2 cut(s) 1203, 2669
BfuAI ACCTGC 2 cut(s) 1107, 3143
BglII AGATCT 2 cut(s) 1433, 1712
BlpI GCTNAGC 1 cut(s) 325
Bme18I GGWCC 6 cut(s) 1131, 1734, 1826, 2455, 3214, 3353
BmgBI CACGTC 1 cut(s) 3088
BmiI GGNNCC 9 cut(s) 80, 272, 869, 2238, 2456, 2568, 2583, 3216, 3285
BmrI ACTGGG 2 cut(s) 611, 1504
BmsI GCATC 7 cut(s) 253, 804, 1261, 1495, 2632, 3098, 3139
BmuI ACTGGG 2 cut(s) 611, 1504
BpiI GAAGAC 4 cut(s) 249, 729, 1653, 2829
BplI GAGNNNNNCTC 2 cut(s) 487, 519
BpmI CTGGAG 3 cut(s) 257, 2364, 2396
Bpu10I CCTNAGC 1 cut(s) 3056
Bpu1102I GCTNAGC 1 cut(s) 325
BpuEI CTTGAG 5 cut(s) 219, 749, 947, 1046, 1495
BpuMI CCSGG 3 cut(s) 2189, 3218, 3253
BsaAI YACGTR 1 cut(s) 2552
BsaBI GATNNNNATC 2 cut(s) 1990, 2088
BsaJI CCNNGG 4 cut(s) 247, 1139, 2232, 2329
BsaWI WCCGGW 2 cut(s) 726, 1032
Bsc4I CCNNNNNNNGG 8 cut(s) 1128, 1140, 1516, 1636, 1835, 1888, 2002, 3124
Bse118I RCCGGY 5 cut(s) 8, 726, 1032, 3042, 3117
Bse1I ACTGG 6 cut(s) 606, 1077, 1510, 2104, 2593, 3375
Bse3DI GCAATG 1 cut(s) 2157
Bse8I GATNNNNATC 2 cut(s) 1990, 2088
BseBI CCWGG 7 cut(s) 167, 268, 275, 640, 1983, 2054, 2330
BseDI CCNNGG 4 cut(s) 247, 1139, 2232, 2329
BseJI GATNNNNATC 2 cut(s) 1990, 2088
BseLI CCNNNNNNNGG 8 cut(s) 1128, 1140, 1516, 1636, 1835, 1888, 2002, 3124
BseMI GCAATG 1 cut(s) 2157
BseNI ACTGG 6 cut(s) 606, 1077, 1510, 2104, 2593, 3375
BseRI GAGGAG 4 cut(s) 48, 1867, 2222, 3345
BseX3I CGGCCG 1 cut(s) 30
BseYI CCCAGC 2 cut(s) 1694, 3278
BsgI GTGCAG 2 cut(s) 600, 3366
Bsh1236I CGCG 1 cut(s) 201
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 8 cut(s) 32, 482, 1313, 1375, 2584, 2632, 3079, 3374
BshTI ACCGGT 2 cut(s) 726, 1032
BsiEI CGRYCG 1 cut(s) 33
BsiHKAI GWGCWC 1 cut(s) 1469
BslFI GGGAC 4 cut(s) 85, 618, 1202, 2468
BslI CCNNNNNNNGG 8 cut(s) 1128, 1140, 1516, 1636, 1835, 1888, 2002, 3124
BsmAI GTCTC 7 cut(s) 54, 679, 739, 856, 1048, 1295, 2929
BsmBI CGTCTC 2 cut(s) 54, 856
BsmFI GGGAC 4 cut(s) 85, 618, 1202, 2468
BsmI GAATGC 3 cut(s) 453, 2867, 3030
BsnI GGCC 8 cut(s) 32, 482, 1313, 1375, 2584, 2632, 3079, 3374
Bsp1286I GDGCHC 1 cut(s) 1469
Bsp1720I GCTNAGC 1 cut(s) 325
Bsp19I CCATGG 1 cut(s) 2232
BspACI CCGC 6 cut(s) 73, 163, 346, 1320, 1599, 2376
BspANI GGCC 8 cut(s) 32, 482, 1313, 1375, 2584, 2632, 3079, 3374
BspFNI CGCG 1 cut(s) 201
BspHI TCATGA 3 cut(s) 1612, 2041, 2764
BspLI GGNNCC 9 cut(s) 80, 272, 869, 2238, 2456, 2568, 2583, 3216, 3285
BspMAI CTGCAG 1 cut(s) 2673
BspMI ACCTGC 2 cut(s) 1107, 3143
BspPI GGATC 5 cut(s) 720, 1993, 2332, 3278, 3291
BsrBI CCGCTC 1 cut(s) 2378
BsrDI GCAATG 1 cut(s) 2157
BsrFI RCCGGY 5 cut(s) 8, 726, 1032, 3042, 3117
BsrI ACTGG 6 cut(s) 606, 1077, 1510, 2104, 2593, 3375
BssAI RCCGGY 5 cut(s) 8, 726, 1032, 3042, 3117
BssECI CCNNGG 4 cut(s) 247, 1139, 2232, 2329
BssT1I CCWWGG 2 cut(s) 1139, 2232
Bst2UI CCWGG 7 cut(s) 167, 268, 275, 640, 1983, 2054, 2330
Bst4CI ACNGT 9 cut(s) 121, 867, 1003, 1054, 1385, 1734, 1791, 3140, 3419
Bst6I CTCTTC 4 cut(s) 284, 620, 1183, 2830
BstBAI YACGTR 1 cut(s) 2552
BstDSI CCRYGG 1 cut(s) 2232
BstENI CCTNNNNNAGG 1 cut(s) 1886
BstFNI CGCG 1 cut(s) 201
BstHHI GCGC 6 cut(s) 203, 324, 1707, 1720, 2150, 2502
BstMAI GTCTC 7 cut(s) 54, 679, 739, 856, 1048, 1295, 2929
BstMCI CGRYCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 4 cut(s) 1319, 2642, 2651, 3380
BstNI CCWGG 7 cut(s) 167, 268, 275, 640, 1983, 2054, 2330
BstNSI RCATGY 2 cut(s) 636, 3511
BstSFI CTRYAG 2 cut(s) 1203, 2669
BstUI CGCG 1 cut(s) 201
BstV2I GAAGAC 4 cut(s) 249, 729, 1653, 2829
BstX2I RGATCY 5 cut(s) 1433, 1712, 1985, 2337, 3283
BstXI CCANNNNNNTGG 3 cut(s) 2247, 2470, 3088
BstYI RGATCY 5 cut(s) 1433, 1712, 1985, 2337, 3283
BstZI CGGCCG 1 cut(s) 30
BsuRI GGCC 8 cut(s) 32, 482, 1313, 1375, 2584, 2632, 3079, 3374
BtgI CCRYGG 1 cut(s) 2232
BtrI CACGTC 1 cut(s) 3088
BtsI GCAGTG 4 cut(s) 2666, 2678, 2755, 3355
BveI ACCTGC 2 cut(s) 1107, 3143
CaiI CAGNNNCTG 1 cut(s) 587
CciI TCATGA 3 cut(s) 1612, 2041, 2764
CfoI GCGC 6 cut(s) 203, 324, 1707, 1720, 2150, 2502
Cfr10I RCCGGY 5 cut(s) 8, 726, 1032, 3042, 3117
CseI GACGC 1 cut(s) 928
Csp6I GTAC 3 cut(s) 541, 2599, 3487
CspAI ACCGGT 2 cut(s) 726, 1032
CspCI CAANNNNNGTGG 6 cut(s) 1954, 1989, 2259, 2294, 3315, 3350
CviQI GTAC 3 cut(s) 541, 2599, 3487
DraI TTTAAA 1 cut(s) 2163
EaeI YGGCCR 3 cut(s) 30, 1311, 3372
EagI CGGCCG 1 cut(s) 30
Eam1104I CTCTTC 4 cut(s) 284, 620, 1183, 2830
EarI CTCTTC 4 cut(s) 284, 620, 1183, 2830
EclXI CGGCCG 1 cut(s) 30
Eco130I CCWWGG 2 cut(s) 1139, 2232
Eco47I GGWCC 6 cut(s) 1131, 1734, 1826, 2455, 3214, 3353
Eco52I CGGCCG 1 cut(s) 30
Eco57I CTGAAG 6 cut(s) 479, 509, 1414, 1803, 2958, 3456
EcoNI CCTNNNNNAGG 1 cut(s) 1886
EcoO109I RGGNCCY 3 cut(s) 1373, 2455, 2582
EcoRII CCWGG 7 cut(s) 165, 266, 273, 638, 1981, 2052, 2328
EcoT14I CCWWGG 2 cut(s) 1139, 2232
EcoT22I ATGCAT 1 cut(s) 3113
ErhI CCWWGG 2 cut(s) 1139, 2232
Esp3I CGTCTC 2 cut(s) 54, 856
FalI AAGNNNNNCTT 2 cut(s) 1132, 1164
FaqI GGGAC 4 cut(s) 85, 618, 1202, 2468
FauI CCCGC 1 cut(s) 80
FauNDI CATATG 1 cut(s) 3495
FbaI TGATCA 3 cut(s) 1093, 2083, 2487
FblI GTMKAC 1 cut(s) 13
FspBI CTAG 8 cut(s) 840, 1197, 1442, 1844, 2342, 2451, 2510, 2976
GlaI GCGC 6 cut(s) 202, 323, 1706, 1719, 2149, 2501
GsaI CCCAGC 2 cut(s) 1698, 3282
GsuI CTGGAG 3 cut(s) 257, 2364, 2396
HaeIII GGCC 8 cut(s) 32, 482, 1313, 1375, 2584, 2632, 3079, 3374
HgaI GACGC 1 cut(s) 928
HhaI GCGC 6 cut(s) 203, 324, 1707, 1720, 2150, 2502
Hin6I GCGC 6 cut(s) 201, 322, 1705, 1718, 2148, 2500
HinP1I GCGC 6 cut(s) 201, 322, 1705, 1718, 2148, 2500
HincII GTYRAC 1 cut(s) 1381
HindII GTYRAC 1 cut(s) 1381
HindIII AAGCTT 5 cut(s) 140, 398, 906, 962, 2803
Hpy166II GTNNAC 4 cut(s) 14, 1381, 3214, 3353
Hpy8I GTNNAC 4 cut(s) 14, 1381, 3214, 3353
Hpy99I CGWCG 3 cut(s) 49, 87, 98
HpyCH4III ACNGT 9 cut(s) 121, 867, 1003, 1054, 1385, 1734, 1791, 3140, 3419
HpyCH4IV ACGT 5 cut(s) 421, 685, 2551, 2834, 3087
HpyF10VI GCNNNNNNNGC 4 cut(s) 1319, 2642, 2651, 3380
HpySE526I ACGT 5 cut(s) 421, 685, 2551, 2834, 3087
HspAI GCGC 6 cut(s) 201, 322, 1705, 1718, 2148, 2500
KroI GCCGGC 1 cut(s) 3042
KroNI GCCGGC 1 cut(s) 3044
Ksp22I TGATCA 3 cut(s) 1093, 2083, 2487
LweI GCATC 7 cut(s) 253, 804, 1261, 1495, 2632, 3098, 3139
MaeI CTAG 8 cut(s) 840, 1197, 1442, 1844, 2342, 2451, 2510, 2976
MaeII ACGT 5 cut(s) 421, 685, 2551, 2834, 3087
MaeIII GTNAC 1 cut(s) 2356
MbiI CCGCTC 1 cut(s) 2378
MfeI CAATTG 1 cut(s) 2271
MflI RGATCY 5 cut(s) 1433, 1712, 1985, 2337, 3283
MhlI GDGCHC 1 cut(s) 1469
MlsI TGGCCA 1 cut(s) 1313
MluNI TGGCCA 1 cut(s) 1313
MlyI GAGTC 8 cut(s) 60, 103, 107, 252, 1270, 1931, 1961, 2425
MmeI TCCRAC 7 cut(s) 106, 315, 785, 839, 1497, 2487, 3376
Mox20I TGGCCA 1 cut(s) 1313
Mph1103I ATGCAT 1 cut(s) 3113
MroNI GCCGGC 1 cut(s) 3042
MroXI GAANNNNTTC 2 cut(s) 1902, 2135
MscI TGGCCA 1 cut(s) 1313
MseI TTAA 6 cut(s) 567, 947, 1214, 1500, 2162, 2529
MslI CAYNNNNRTG 7 cut(s) 684, 1269, 1683, 2671, 2686, 3086, 3494
Msp20I TGGCCA 1 cut(s) 1313
MspA1I CMGCKG 2 cut(s) 584, 1823
MunI CAATTG 1 cut(s) 2271
Mva1269I GAATGC 3 cut(s) 453, 2867, 3030
MvaI CCWGG 7 cut(s) 167, 268, 275, 640, 1983, 2054, 2330
MvnI CGCG 1 cut(s) 201
MwoI GCNNNNNNNGC 4 cut(s) 1319, 2642, 2651, 3380
NaeI GCCGGC 1 cut(s) 3044
NciI CCSGG 3 cut(s) 2189, 3218, 3253
NcoI CCATGG 1 cut(s) 2232
NdeI CATATG 1 cut(s) 3495
NgoMIV GCCGGC 1 cut(s) 3042
NlaIV GGNNCC 9 cut(s) 80, 272, 869, 2238, 2456, 2568, 2583, 3216, 3285
NmuCI GTSAC 1 cut(s) 2356
NsiI ATGCAT 1 cut(s) 3113
NspI RCATGY 2 cut(s) 636, 3511
OliI CACNNNNGTG 3 cut(s) 684, 2671, 3086
PagI TCATGA 3 cut(s) 1612, 2041, 2764
PaqCI CACCTGC 1 cut(s) 1107
PciI ACATGT 1 cut(s) 3507
PctI GAATGC 3 cut(s) 453, 2867, 3030
PdiI GCCGGC 1 cut(s) 3044
PdmI GAANNNNTTC 2 cut(s) 1902, 2135
PfeI GAWTC 7 cut(s) 980, 1397, 1403, 1564, 2156, 2518, 3173
PflFI GACNNNGTC 1 cut(s) 2189
PflMI CCANNNNNTGG 2 cut(s) 1516, 2002
PinAI ACCGGT 2 cut(s) 726, 1032
PleI GAGTC 8 cut(s) 60, 103, 106, 252, 1269, 1930, 1960, 2424
PpsI GAGTC 8 cut(s) 60, 103, 106, 252, 1269, 1930, 1960, 2424
Ppu21I YACGTR 1 cut(s) 2552
PpuMI RGGWCCY 1 cut(s) 2455
PscI ACATGT 1 cut(s) 3507
Psp5II RGGWCCY 1 cut(s) 2455
Psp6I CCWGG 7 cut(s) 165, 266, 273, 638, 1981, 2052, 2328
PspFI CCCAGC 2 cut(s) 1694, 3278
PspGI CCWGG 7 cut(s) 165, 266, 273, 638, 1981, 2052, 2328
PspN4I GGNNCC 9 cut(s) 80, 272, 869, 2238, 2456, 2568, 2583, 3216, 3285
PspPPI RGGWCCY 1 cut(s) 2455
PstI CTGCAG 1 cut(s) 2673
PstNI CAGNNNCTG 1 cut(s) 587
PsuI RGATCY 5 cut(s) 1433, 1712, 1985, 2337, 3283
PsyI GACNNNGTC 1 cut(s) 2189
PvuII CAGCTG 2 cut(s) 584, 1823
RsaI GTAC 3 cut(s) 542, 2600, 3488
RsaNI GTAC 3 cut(s) 541, 2599, 3487
RseI CAYNNNNRTG 7 cut(s) 684, 1269, 1683, 2671, 2686, 3086, 3494
SaqAI TTAA 6 cut(s) 567, 947, 1214, 1500, 2162, 2529
SchI GAGTC 8 cut(s) 60, 103, 107, 252, 1270, 1931, 1961, 2425
SduI GDGCHC 1 cut(s) 1469
SfaNI GCATC 7 cut(s) 253, 804, 1261, 1495, 2632, 3098, 3139
SfcI CTRYAG 2 cut(s) 1203, 2669
SinI GGWCC 6 cut(s) 1131, 1734, 1826, 2455, 3214, 3353
SmiMI CAYNNNNRTG 7 cut(s) 684, 1269, 1683, 2671, 2686, 3086, 3494
SmlI CTYRAG 5 cut(s) 234, 764, 926, 1025, 1474
SmoI CTYRAG 5 cut(s) 234, 764, 926, 1025, 1474
SsiI CCGC 6 cut(s) 73, 163, 346, 1320, 1599, 2376
SspI AATATT 1 cut(s) 2068
SspMI CTAG 8 cut(s) 840, 1197, 1442, 1844, 2342, 2451, 2510, 2976
StyI CCWWGG 2 cut(s) 1139, 2232
TaaI ACNGT 9 cut(s) 121, 867, 1003, 1054, 1385, 1734, 1791, 3140, 3419
TaiI ACGT 5 cut(s) 424, 688, 2554, 2837, 3090
TaqI TCGA 6 cut(s) 93, 123, 223, 261, 957, 1021
TaqII GACCGA 2 cut(s) 3370, 3428
TatI WGTACW 1 cut(s) 540
TauI GCSGC 2 cut(s) 165, 349
TfiI GAWTC 7 cut(s) 980, 1397, 1403, 1564, 2156, 2518, 3173
Tru1I TTAA 6 cut(s) 567, 947, 1214, 1500, 2162, 2529
Tru9I TTAA 6 cut(s) 567, 947, 1214, 1500, 2162, 2529
TseFI GTSAC 1 cut(s) 2356
Tsp45I GTSAC 1 cut(s) 2356
TspGWI ACGGA 1 cut(s) 100
Tth111I GACNNNGTC 1 cut(s) 2189
Van91I CCANNNNNTGG 2 cut(s) 1516, 2002
VpaK11BI GGWCC 6 cut(s) 1131, 1734, 1826, 2455, 3214, 3353
XagI CCTNNNNNAGG 1 cut(s) 1886
XapI RAATTY 4 cut(s) 1328, 2223, 3000, 3225
XbaI TCTAGA 3 cut(s) 839, 2509, 2975
XceI RCATGY 2 cut(s) 636, 3511
XmiI GTMKAC 1 cut(s) 13
XmnI GAANNNNTTC 2 cut(s) 1902, 2135
XspI CTAG 8 cut(s) 840, 1197, 1442, 1844, 2342, 2451, 2510, 2976
Zsp2I ATGCAT 1 cut(s) 3113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.