RLG00000002166
TCP Family

T-complex protein 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0005785
Physical Location & Seq
Forward (+)
26658396 .. 26665958
7563 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002166

Sequence Viewer

Length: 3528 bp
ATGGTCCCCGCCGGTGGTGTAGTTTTGGATTTTCCGGCCGGTGAAACGCCGTCGTCTCCTCCAAGACTGCCCCGCAGGCTCAGACGGAGGCTCGACCTTGTTCAGTCCTCCAAGACTCCCAACACTGTTGAACAAATCCAGACCAAGCTTCGACTCGCCGATCTTCGCCGCCAGGAACACTATGAAAAGTTGTCAAACAAGGCCAGGACAAAGCCCAGAAGCCCCTCTCGATCTTCTTCTCAAGAGGAAGACCTTGGCGAGCGACTGGATGCCAAGCTCCAAGCTGCTGAGAAGAAAAGGTTGCTTATTTTGGAGAAGGCTCAAATGCGCTTAGCTAAGTTGGATGAGTTGCGGCAAGCAGCTAAAAGTGGTGTAGAGATGCGTTTTGAGAAGGAACGACAGAAGCTTGGTTCAAAAGTTGAATTACGTTTTCAGCAGGCAGAGGCAAATAGAATGCTTATGCTCAAGGCTTATAGACAAAGAAGGGCCAACTTGAAGGAGAGGTCATCTCAGTCATTGTTGCGAAAGATGGCTTGGGAGAATAAGTACAAGGAGCGCGTGCGTGCTGCAATCAACCAAAAACGCGCAGCTGCTGAGAAAAAGCGACTGGTACTTTTGGAAGAAGAGAAGAAGAGGGCATACGCCAGGACGTTGCAAGTGCAAAGAGTAGCGAAGTCTGTCTCTCACCAACGTGAGATTGAAAGGAGAGCGAAAAGGGATCAGTTAGAAGACCGGTTGCAGAGGGCAAAGAGACAAAGAGCAGAATATCTCAAGCAAAGAGGAAAGATACAGAATTCATTTCAAGTCAGTTGGAATAGGATGCATAAACAGGCTGATCTCCTGTCTAGAAAGTTGGCAAGGTGTTGGAGACGGTTCCACAAGCTAAAGAGAACTACGTTTGCTTTGGCAAAAGCTTACAATACCTTGAAACTTGAGGAAAATAGCGTCAAGTCAATGCCGTTCGAGCAGCTTGCAATTCTGATTGAATCACCTGATACCCTTCAGACTGTGAAGGCTCTACTTGATCGACTTGAGAACCGGTTGAAAGTCTCCAAGACTGTAGCCTCTATAAACTATCCGTCCAGTATTGATAACATAGATCACCTTCTCAAACGAGTTGCTTCTCCCAAAAGGAGGACCACACCAAGGACATCTTTGAGAAGCAGGGAGGGAAAGAAAGCCTCTTCTGTCAGGGCCACAACCAGAACTGCAGCTAAATTAACAAGGTATCAAGTGAGAGTGGTTCTTTGCGCTTACATGATTTTGAGTCATCCAGATGCGGTTTTCAATGGTCAAGGAGAGCGTGAGACTTCTCTGGCCAAATCTGCAGAAGAATTTGTTAGAGAGTTTGAGTTGTTGGTCAAGACTACATTACAGGGCCCGGTCAACAGTTCTGAGGAAGATTCTGATTCCACATCGTCCAAACGCTTAACCTTCAGATCTCAGCTAGGAGCTTTTGATAAAGCGTGGTGCTCCTACTTGAGTTGCTTTGTGGCATGGAAGGTTAAGGATGCCCAGTTGTTGGAGGGAGATTTAGTGAGGGCAGCTTGCCAGATGGAGCTGTCTATGATTCAAACTTGCAAGATGACTTCAGAAGGACATACTGCCGATCTCACTCATGATATGAAGGCTATTCAGAAGCAGGTTGCAGAAGACCAAAAGCTACTGAGAGAAAAGGTGCAACACTTAAGTGGAGAAGCTGGGATTGAGCGTATGGCATCTGCTTTATCTGAAACACGGTCCAAGTATTTTGCAGCAAAAGAAAATGGAAGTCCATCAGGGTTGCAAACCACACAGTTTGTTTCTCCAAGCCCTCCAAGTTCAGCAGCTGGTCCTTCTGTTTCTAGCTTAGATAAGAGGAGTAATCCAAGTCGTGTAGTTCGTTCCCTATTTCAGGAAGATGAATCTATTTGTCAGAAAGGATTAGAGTCAACTGAGATTGGATTGATTGTGAATGAGTTCTCTAAGACCAATTTGGGAGGGCAGCTTGGATCTTCTTCCCAAAAGCCAGTCACTGAGAATGAACTGATTGTGAATGAGTTTCTCCATGAGCAAAACCAGGCTCTTGCTAATATTTTCAATGCTGCCGATGAAGATCAAAATAATGTCCAGTCAAAGATCAGAAATACGATGGAGAAGGCTTTCTGGGATGGCATAATGGAATCTGTAAACCAGGAAGAGCCCAACTATGACCGGATCATTCAACTGTTGGAGGAGGTGAGGGATGAAATTTGCACCATGGCTCCACAGAGCTGGAAACAAGAAATTGTTGAAGCAATTGATGTGGATATTCTCTCTCAGGTGCTAAAATCTGGTAACCTGGACATTGATTACCTGGGAAAGATCCTAGAGTTTTCAATGGTCACTTTGCGAAGGCTCTCCGCTCCTGCGAATGATGATGAAATGATGGCCACTCTCCAGAGTTTAAGGAATGAACTAGATGAGATATGTAATGCTAGGGACCAGTCCAACAGCTCAGGTGTCATTGCTATGATCAAGGGTCTGCGTTTTGTTCTAGAGCAGATTCAGGTGCTTAAACGTGAGATTAGCAAAGCACGTATAAGAATAATGGAGCCTTTGTTGAAGGGGCCCACTGGTTTGCAGTACCTTAGAAATGCCTTTGCCAATCGCTATGGACCTGCCTCAGGTGCCAATACCTCTCTACCAGTGATGGTGCAGTGGCTTTCATCTGTGTGGAATTGCAAAGATCAGGAGTGGCAAGAACATAAGATTGCATCCTCGACTTTGATGAGCAGTGATGATTTGTCTCATGAGTTTCTTCCTTCCACCACCCTTAGAAGTGGTGGAAGCTTTCTGTTGAAATCAAATTCTTCATCTCTGTCATCTAGAAATAGCCAAGGTAACGTACAACCGGAATGCAAGGGAGAAGGAGTTGATTTGTTGGTGAGGCTTGGCTTGTTGAAGTTGGTGAGTGGTGTTTCTGGTCTGACTGAAGAGGCCCTGCCTGAAACTTTTATGCTCAACCTTTCTAGATTAAGGGCTGTGCAGGCTCAAATTCAGAAAATTATTGTTTCTTCCATAAGCATTCTTATTTGCCGGCAAACCATATTAAGCGAGGGGGTGATAACAACGCCCAGAGACATGGAGGGCATCCTGTCAAGATGCATTGAGGGGCTTTTGGGGATATTGGACAGTGTTGAAGATGCAGGTATGGAAGAAATTGTTGAATCAATTAGTGATTTCTCCATCAATGGAAATGAAGTTGTGGACGCTGAGAAAGTTCGGTTGAGAAAGATGGTTATAGCCCGGATGTTAGCAAAGAGCCTGCAAGCTGGGGATCCCGTGTTTGAGAGGGTTTCCCGTGCTGTTTATATGGCTGCAAGAGGAGTGGTTCTTGGGGGGAGTGGACCGCTTGGAAGAAAATTGGCTGAAACTGCACTCCGGCAAGTTGGAGCAGCAGTGCTGACTGACAGTGTGGTGGAAGCTGCTGAAGTTTTAGTTGTGGCTGCTACCATATCAGTCGGTGTTCATGGAGCATGGTATATACGTACGATTGATAACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tcp11

Protein Analysis

1176

Amino Acids

131.91

Weight (kDa)

9.51

Isoelectric Point (pI)

56.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tcp11 PF05794 694 - 1171 1.2e-71 T-complex protein 11
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 1633, 2647, 3158
AccB1I GGYRCC 1 cut(s) 2648
AccB7I CCANNNNNTGG 1 cut(s) 1522
AccBSI CCGCTC 1 cut(s) 2384
AccII CGCG 2 cut(s) 558, 585
AciI CCGC 7 cut(s) 9, 73, 169, 352, 1280, 2382, 3371
AclWI GGATC 6 cut(s) 726, 1999, 2204, 2338, 3293, 3306
AcoI YGGCCR 3 cut(s) 36, 1317, 2409
AcsI RAATTY 5 cut(s) 793, 1334, 2229, 2827, 3015
AcuI CTGAAG 5 cut(s) 986, 1420, 1575, 2973, 3471
AfaI GTAC 5 cut(s) 548, 612, 2606, 2868, 3511
AfiI CCNNNNNNNGG 6 cut(s) 14, 1134, 1146, 1522, 1894, 2645
AflII CTTAAG 1 cut(s) 1687
AflIII ACRYGT 1 cut(s) 3522
AgeI ACCGGT 2 cut(s) 732, 1038
AjnI CCWGG 7 cut(s) 171, 203, 644, 2058, 2172, 2319, 2334
AjuI GAANNNNNNNTTGG 2 cut(s) 517, 549
AleI CACNNNNGTG 2 cut(s) 690, 1689
Alw21I GWGCWC 1 cut(s) 1475
Alw26I GTCTC 8 cut(s) 60, 685, 745, 862, 1054, 1301, 2772, 3093
AlwI GGATC 6 cut(s) 726, 1999, 2204, 2338, 3293, 3306
AlwNI CAGNNNCTG 3 cut(s) 593, 1829, 2015
AoxI GGCC 9 cut(s) 36, 201, 486, 1194, 1317, 1378, 2409, 2588, 2958
ApaI GGGCCC 2 cut(s) 1382, 2592
ApoI RAATTY 5 cut(s) 793, 1334, 2229, 2827, 3015
AsiGI ACCGGT 2 cut(s) 732, 1038
Asp700I GAANNNNTTC 2 cut(s) 1958, 2141
AspLEI GCGC 4 cut(s) 330, 558, 587, 1253
AsuC2I CCSGG 2 cut(s) 1382, 3268
AsuHPI GGTGA 8 cut(s) 53, 677, 981, 1094, 2230, 2917, 2941, 3094
AvaII GGWCC 7 cut(s) 4, 1137, 1740, 1832, 2461, 2636, 3368
AxyI CCTNAGG 1 cut(s) 2644
BaeGI GKGCMC 2 cut(s) 1382, 2592
BalI TGGCCA 2 cut(s) 1319, 2411
BamHI GGATCC 1 cut(s) 3298
BanI GGYRCC 1 cut(s) 2648
BanII GRGCYC 3 cut(s) 1382, 2184, 2592
BarI GAAGNNNNNNTAC 2 cut(s) 623, 655
BbsI GAAGAC 3 cut(s) 255, 735, 1659
Bbv12I GWGCWC 1 cut(s) 1475
BccI CCATC 9 cut(s) 523, 1549, 1783, 2125, 2144, 2401, 2665, 3215, 3250
BceAI ACGGC 2 cut(s) 34, 943
BcgI CGANNNNNNTGC 2 cut(s) 953, 987
BciT130I CCWGG 7 cut(s) 173, 205, 646, 2060, 2174, 2321, 2336
BclI TGATCA 1 cut(s) 2493
BcnI CCSGG 2 cut(s) 1382, 3268
BcoDI GTCTC 8 cut(s) 60, 685, 745, 862, 1054, 1301, 2772, 3093
BfaI CTAG 9 cut(s) 846, 1448, 1845, 2348, 2438, 2457, 2516, 2847, 2991
BfmI CTRYAG 3 cut(s) 1059, 1209, 1326
BfrI CTTAAG 1 cut(s) 1687
BfuAI ACCTGC 3 cut(s) 1633, 2647, 3158
BglI GCCNNNNNGGC 1 cut(s) 76
BglII AGATCT 1 cut(s) 1439
BlpI GCTNAGC 1 cut(s) 331
Bme1390I CCNGG 9 cut(s) 173, 205, 646, 1382, 2060, 2174, 2321, 2336, 3268
Bme18I GGWCC 7 cut(s) 4, 1137, 1740, 1832, 2461, 2636, 3368
BmrFI CCNGG 9 cut(s) 173, 205, 646, 1382, 2060, 2174, 2321, 2336, 3268
BmrI ACTGGG 1 cut(s) 1510
BmuI ACTGGG 1 cut(s) 1510
BpiI GAAGAC 3 cut(s) 255, 735, 1659
BplI GAGNNNNNCTC 2 cut(s) 493, 525
BpmI CTGGAG 1 cut(s) 2402
Bpu10I CCTNAGC 1 cut(s) 2476
Bpu1102I GCTNAGC 1 cut(s) 331
BpuEI CTTGAG 6 cut(s) 225, 449, 755, 953, 1052, 1501
BpuMI CCSGG 2 cut(s) 1382, 3268
BsaAI YACGTR 2 cut(s) 2558, 3509
BsaBI GATNNNNATC 1 cut(s) 2094
BsaJI CCNNGG 5 cut(s) 253, 1145, 2238, 2335, 2857
BsaWI WCCGGW 4 cut(s) 732, 1038, 2193, 2872
Bsc4I CCNNNNNNNGG 6 cut(s) 14, 1134, 1146, 1522, 1894, 2645
Bse118I RCCGGY 5 cut(s) 11, 38, 732, 1038, 3057
Bse1I ACTGG 9 cut(s) 270, 612, 1083, 1516, 2009, 2110, 2464, 2599, 2666
Bse21I CCTNAGG 1 cut(s) 2644
Bse3DI GCAATG 1 cut(s) 2484
Bse8I GATNNNNATC 1 cut(s) 2094
BseBI CCWGG 7 cut(s) 173, 205, 646, 2060, 2174, 2321, 2336
BseDI CCNNGG 5 cut(s) 253, 1145, 2238, 2335, 2857
BseJI GATNNNNATC 1 cut(s) 2094
BseLI CCNNNNNNNGG 6 cut(s) 14, 1134, 1146, 1522, 1894, 2645
BseMI GCAATG 1 cut(s) 2484
BseNI ACTGG 9 cut(s) 270, 612, 1083, 1516, 2009, 2110, 2464, 2599, 2666
BseRI GAGGAG 4 cut(s) 48, 1873, 2228, 3360
BseSI GKGCMC 2 cut(s) 1382, 2592
BseX3I CGGCCG 1 cut(s) 36
BseYI CCCAGC 2 cut(s) 1700, 3293
BsgI GTGCAG 3 cut(s) 2696, 3026, 3381
Bsh1236I CGCG 2 cut(s) 558, 585
Bsh1285I CGRYCG 1 cut(s) 39
BshFI GGCC 9 cut(s) 38, 203, 488, 1196, 1319, 1380, 2411, 2590, 2960
BshNI GGYRCC 1 cut(s) 2648
BshTI ACCGGT 2 cut(s) 732, 1038
BsiEI CGRYCG 1 cut(s) 39
BsiHKAI GWGCWC 1 cut(s) 1475
BsiWI CGTACG 1 cut(s) 3509
BslFI GGGAC 1 cut(s) 2474
BslI CCNNNNNNNGG 6 cut(s) 14, 1134, 1146, 1522, 1894, 2645
BsmAI GTCTC 8 cut(s) 60, 685, 745, 862, 1054, 1301, 2772, 3093
BsmBI CGTCTC 2 cut(s) 60, 862
BsmFI GGGAC 1 cut(s) 2474
BsmI GAATGC 3 cut(s) 459, 2882, 3045
BsnI GGCC 9 cut(s) 38, 203, 488, 1196, 1319, 1380, 2411, 2590, 2960
Bsp120I GGGCCC 2 cut(s) 1378, 2588
Bsp1286I GDGCHC 4 cut(s) 1382, 1475, 2184, 2592
Bsp1720I GCTNAGC 1 cut(s) 331
Bsp19I CCATGG 1 cut(s) 2238
BspACI CCGC 7 cut(s) 9, 73, 169, 352, 1280, 2382, 3371
BspANI GGCC 9 cut(s) 38, 203, 488, 1196, 1319, 1380, 2411, 2590, 2960
BspFNI CGCG 2 cut(s) 558, 585
BspHI TCATGA 2 cut(s) 1618, 2770
BspMAI CTGCAG 2 cut(s) 1213, 1330
BspMI ACCTGC 3 cut(s) 1633, 2647, 3158
BspPI GGATC 6 cut(s) 726, 1999, 2204, 2338, 3293, 3306
BspQI GCTCTTC 1 cut(s) 2172
BspT107I GGYRCC 1 cut(s) 2648
BspTI CTTAAG 1 cut(s) 1687
BsrBI CCGCTC 1 cut(s) 2384
BsrDI GCAATG 1 cut(s) 2484
BsrFI RCCGGY 5 cut(s) 11, 38, 732, 1038, 3057
BsrI ACTGG 9 cut(s) 270, 612, 1083, 1516, 2009, 2110, 2464, 2599, 2666
BssAI RCCGGY 5 cut(s) 11, 38, 732, 1038, 3057
BssECI CCNNGG 5 cut(s) 253, 1145, 2238, 2335, 2857
BssT1I CCWWGG 4 cut(s) 253, 1145, 2238, 2857
Bst2UI CCWGG 7 cut(s) 173, 205, 646, 2060, 2174, 2321, 2336
Bst6I CTCTTC 5 cut(s) 618, 626, 1189, 2172, 2949
BstAFI CTTAAG 1 cut(s) 1687
BstBAI YACGTR 2 cut(s) 2558, 3509
BstDSI CCRYGG 1 cut(s) 2238
BstEII GGTNACC 1 cut(s) 2315
BstENI CCTNNNNNAGG 2 cut(s) 1892, 2643
BstFNI CGCG 2 cut(s) 558, 585
BstHHI GCGC 4 cut(s) 330, 558, 587, 1253
BstMAI GTCTC 8 cut(s) 60, 685, 745, 862, 1054, 1301, 2772, 3093
BstMCI CGRYCG 1 cut(s) 39
BstMWI GCNNNNNNNGC 6 cut(s) 76, 964, 1325, 2648, 3008, 3395
BstNI CCWGG 7 cut(s) 173, 205, 646, 2060, 2174, 2321, 2336
BstNSI RCATGY 1 cut(s) 3526
BstPI GGTNACC 1 cut(s) 2315
BstSCI CCNGG 9 cut(s) 171, 203, 644, 1380, 2058, 2172, 2319, 2334, 3266
BstSFI CTRYAG 3 cut(s) 1059, 1209, 1326
BstSLI GKGCMC 2 cut(s) 1382, 2592
BstSNI TACGTA 1 cut(s) 3509
BstUI CGCG 2 cut(s) 558, 585
BstV2I GAAGAC 3 cut(s) 255, 735, 1659
BstX2I RGATCY 4 cut(s) 1439, 1991, 2343, 3298
BstXI CCANNNNNNTGG 2 cut(s) 2253, 3103
BstYI RGATCY 4 cut(s) 1439, 1991, 2343, 3298
BstZI CGGCCG 1 cut(s) 36
Bsu36I CCTNAGG 1 cut(s) 2644
BsuRI GGCC 9 cut(s) 38, 203, 488, 1196, 1319, 1380, 2411, 2590, 2960
BtgI CCRYGG 1 cut(s) 2238
BtsI GCAGTG 3 cut(s) 2684, 2761, 3426
BtsIMutI CAGTG 9 cut(s) 123, 2013, 2592, 2673, 2684, 2761, 3160, 3426, 3439
BveI ACCTGC 3 cut(s) 1633, 2647, 3158
CaiI CAGNNNCTG 3 cut(s) 593, 1829, 2015
CciI TCATGA 2 cut(s) 1618, 2770
CfoI GCGC 4 cut(s) 330, 558, 587, 1253
Cfr10I RCCGGY 5 cut(s) 11, 38, 732, 1038, 3057
CseI GACGC 2 cut(s) 934, 3239
Csp6I GTAC 5 cut(s) 547, 611, 2605, 2867, 3510
CspAI ACCGGT 2 cut(s) 732, 1038
CspCI CAANNNNNGTGG 6 cut(s) 1780, 1815, 2265, 2300, 3330, 3365
CviQI GTAC 5 cut(s) 547, 611, 2605, 2867, 3510
EaeI YGGCCR 3 cut(s) 36, 1317, 2409
EagI CGGCCG 1 cut(s) 36
Eam1104I CTCTTC 5 cut(s) 618, 626, 1189, 2172, 2949
EarI CTCTTC 5 cut(s) 618, 626, 1189, 2172, 2949
EclXI CGGCCG 1 cut(s) 36
Eco105I TACGTA 1 cut(s) 3509
Eco130I CCWWGG 4 cut(s) 253, 1145, 2238, 2857
Eco24I GRGCYC 3 cut(s) 1382, 2184, 2592
Eco47I GGWCC 7 cut(s) 4, 1137, 1740, 1832, 2461, 2636, 3368
Eco52I CGGCCG 1 cut(s) 36
Eco57I CTGAAG 5 cut(s) 986, 1420, 1575, 2973, 3471
Eco81I CCTNAGG 1 cut(s) 2644
Eco91I GGTNACC 1 cut(s) 2315
EcoNI CCTNNNNNAGG 2 cut(s) 1892, 2643
EcoO109I RGGNCCY 3 cut(s) 1378, 2588, 2959
EcoO65I GGTNACC 1 cut(s) 2315
EcoRI GAATTC 1 cut(s) 793
EcoRII CCWGG 7 cut(s) 171, 203, 644, 2058, 2172, 2319, 2334
EcoT14I CCWWGG 4 cut(s) 253, 1145, 2238, 2857
EcoT22I ATGCAT 2 cut(s) 825, 3128
EcoT38I GRGCYC 3 cut(s) 1382, 2184, 2592
ErhI CCWWGG 4 cut(s) 253, 1145, 2238, 2857
Esp3I CGTCTC 2 cut(s) 60, 862
FalI AAGNNNNNCTT 2 cut(s) 1138, 1170
FaqI GGGAC 1 cut(s) 2474
FauI CCCGC 2 cut(s) 16, 80
FbaI TGATCA 1 cut(s) 2493
FriOI GRGCYC 3 cut(s) 1382, 2184, 2592
FspBI CTAG 9 cut(s) 846, 1448, 1845, 2348, 2438, 2457, 2516, 2847, 2991
GlaI GCGC 4 cut(s) 329, 557, 586, 1252
GsaI CCCAGC 2 cut(s) 1704, 3297
GsuI CTGGAG 1 cut(s) 2402
HaeIII GGCC 9 cut(s) 38, 203, 488, 1196, 1319, 1380, 2411, 2590, 2960
HgaI GACGC 2 cut(s) 934, 3239
HhaI GCGC 4 cut(s) 330, 558, 587, 1253
Hin6I GCGC 4 cut(s) 328, 556, 585, 1251
HinP1I GCGC 4 cut(s) 328, 556, 585, 1251
HincII GTYRAC 2 cut(s) 1387, 1932
HindII GTYRAC 2 cut(s) 1387, 1932
HindIII AAGCTT 4 cut(s) 146, 404, 912, 2809
HphI GGTGA 8 cut(s) 53, 677, 981, 1094, 2230, 2917, 2941, 3094
Hpy166II GTNNAC 5 cut(s) 1387, 1932, 2170, 3229, 3368
Hpy8I GTNNAC 5 cut(s) 1387, 1932, 2170, 3229, 3368
Hpy99I CGWCG 1 cut(s) 55
HpyCH4IV ACGT 8 cut(s) 427, 650, 691, 896, 2539, 2557, 2865, 3508
HpyF10VI GCNNNNNNNGC 6 cut(s) 76, 964, 1325, 2648, 3008, 3395
HpySE526I ACGT 8 cut(s) 427, 650, 691, 896, 2539, 2557, 2865, 3508
HspAI GCGC 4 cut(s) 328, 556, 585, 1251
KroI GCCGGC 1 cut(s) 3057
KroNI GCCGGC 1 cut(s) 3059
Ksp22I TGATCA 1 cut(s) 2493
LguI GCTCTTC 1 cut(s) 2172
MaeI CTAG 9 cut(s) 846, 1448, 1845, 2348, 2438, 2457, 2516, 2847, 2991
MaeII ACGT 8 cut(s) 427, 650, 691, 896, 2539, 2557, 2865, 3508
MaeIII GTNAC 4 cut(s) 2011, 2315, 2362, 2861
MbiI CCGCTC 1 cut(s) 2384
MfeI CAATTG 1 cut(s) 2277
MflI RGATCY 4 cut(s) 1439, 1991, 2343, 3298
MhlI GDGCHC 4 cut(s) 1382, 1475, 2184, 2592
MlsI TGGCCA 2 cut(s) 1319, 2411
MluNI TGGCCA 2 cut(s) 1319, 2411
MlyI GAGTC 4 cut(s) 109, 147, 1276, 1937
MmeI TCCRAC 7 cut(s) 321, 791, 845, 1503, 2190, 2493, 3391
Mox20I TGGCCA 2 cut(s) 1319, 2411
Mph1103I ATGCAT 2 cut(s) 825, 3128
MroNI GCCGGC 1 cut(s) 3057
MroXI GAANNNNTTC 2 cut(s) 1958, 2141
MscI TGGCCA 2 cut(s) 1319, 2411
MseI TTAA 8 cut(s) 1220, 1430, 1506, 1688, 2426, 2535, 2996, 3071
MslI CAYNNNNRTG 5 cut(s) 690, 1275, 1689, 2489, 2692
Msp20I TGGCCA 2 cut(s) 1319, 2411
MspA1I CMGCKG 2 cut(s) 590, 1829
MspCI CTTAAG 1 cut(s) 1687
MspR9I CCNGG 9 cut(s) 173, 205, 646, 1382, 2060, 2174, 2321, 2336, 3268
MunI CAATTG 1 cut(s) 2277
Mva1269I GAATGC 3 cut(s) 459, 2882, 3045
MvaI CCWGG 7 cut(s) 173, 205, 646, 2060, 2174, 2321, 2336
MvnI CGCG 2 cut(s) 558, 585
MwoI GCNNNNNNNGC 6 cut(s) 76, 964, 1325, 2648, 3008, 3395
NaeI GCCGGC 1 cut(s) 3059
NciI CCSGG 2 cut(s) 1382, 3268
NcoI CCATGG 1 cut(s) 2238
NgoMIV GCCGGC 1 cut(s) 3057
NmuCI GTSAC 2 cut(s) 2011, 2362
NsiI ATGCAT 2 cut(s) 825, 3128
NspI RCATGY 1 cut(s) 3526
OliI CACNNNNGTG 2 cut(s) 690, 1689
PagI TCATGA 2 cut(s) 1618, 2770
PciI ACATGT 1 cut(s) 3522
PciSI GCTCTTC 1 cut(s) 2172
PcsI WCGNNNNNNNCGW 1 cut(s) 1879
PctI GAATGC 3 cut(s) 459, 2882, 3045
PdiI GCCGGC 1 cut(s) 3059
PdmI GAANNNNTTC 2 cut(s) 1958, 2141
PfeI GAWTC 8 cut(s) 986, 1403, 1409, 1570, 1904, 2162, 2524, 3188
Pfl23II CGTACG 1 cut(s) 3509
PflMI CCANNNNNTGG 1 cut(s) 1522
PinAI ACCGGT 2 cut(s) 732, 1038
PleI GAGTC 4 cut(s) 109, 147, 1275, 1936
PpsI GAGTC 4 cut(s) 109, 147, 1275, 1936
Ppu21I YACGTR 2 cut(s) 2558, 3509
PscI ACATGT 1 cut(s) 3522
Psp6I CCWGG 7 cut(s) 171, 203, 644, 2058, 2172, 2319, 2334
PspEI GGTNACC 1 cut(s) 2315
PspFI CCCAGC 2 cut(s) 1700, 3293
PspGI CCWGG 7 cut(s) 171, 203, 644, 2058, 2172, 2319, 2334
PspLI CGTACG 1 cut(s) 3509
PspOMI GGGCCC 2 cut(s) 1378, 2588
PstI CTGCAG 2 cut(s) 1213, 1330
PstNI CAGNNNCTG 3 cut(s) 593, 1829, 2015
PsuI RGATCY 4 cut(s) 1439, 1991, 2343, 3298
PvuII CAGCTG 2 cut(s) 590, 1829
RsaI GTAC 5 cut(s) 548, 612, 2606, 2868, 3511
RsaNI GTAC 5 cut(s) 547, 611, 2605, 2867, 3510
RseI CAYNNNNRTG 5 cut(s) 690, 1275, 1689, 2489, 2692
SapI GCTCTTC 1 cut(s) 2172
SaqAI TTAA 8 cut(s) 1220, 1430, 1506, 1688, 2426, 2535, 2996, 3071
SchI GAGTC 4 cut(s) 109, 147, 1276, 1937
ScrFI CCNGG 9 cut(s) 173, 205, 646, 1382, 2060, 2174, 2321, 2336, 3268
SduI GDGCHC 4 cut(s) 1382, 1475, 2184, 2592
SfcI CTRYAG 3 cut(s) 1059, 1209, 1326
SgrAI CRCCGGYG 1 cut(s) 11
SinI GGWCC 7 cut(s) 4, 1137, 1740, 1832, 2461, 2636, 3368
SmiMI CAYNNNNRTG 5 cut(s) 690, 1275, 1689, 2489, 2692
SmlI CTYRAG 7 cut(s) 240, 464, 770, 932, 1031, 1480, 1687
SmoI CTYRAG 7 cut(s) 240, 464, 770, 932, 1031, 1480, 1687
SnaBI TACGTA 1 cut(s) 3509
SsiI CCGC 7 cut(s) 9, 73, 169, 352, 1280, 2382, 3371
SspI AATATT 1 cut(s) 2074
SspMI CTAG 9 cut(s) 846, 1448, 1845, 2348, 2438, 2457, 2516, 2847, 2991
StyD4I CCNGG 9 cut(s) 171, 203, 644, 1380, 2058, 2172, 2319, 2334, 3266
StyI CCWWGG 4 cut(s) 253, 1145, 2238, 2857
TaiI ACGT 8 cut(s) 430, 653, 694, 899, 2542, 2560, 2868, 3511
TaqI TCGA 6 cut(s) 93, 151, 229, 963, 1027, 2741
TatI WGTACW 1 cut(s) 546
TauI GCSGC 2 cut(s) 171, 355
TfiI GAWTC 8 cut(s) 986, 1403, 1409, 1570, 1904, 2162, 2524, 3188
Tru1I TTAA 8 cut(s) 1220, 1430, 1506, 1688, 2426, 2535, 2996, 3071
Tru9I TTAA 8 cut(s) 1220, 1430, 1506, 1688, 2426, 2535, 2996, 3071
TscAI CASTG 9 cut(s) 130, 2020, 2599, 2673, 2684, 2761, 3160, 3426, 3439
TseFI GTSAC 2 cut(s) 2011, 2362
Tsp45I GTSAC 2 cut(s) 2011, 2362
TspGWI ACGGA 2 cut(s) 100, 1068
TspRI CASTG 9 cut(s) 130, 2020, 2599, 2673, 2684, 2761, 3160, 3426, 3439
Van91I CCANNNNNTGG 1 cut(s) 1522
Vha464I CTTAAG 1 cut(s) 1687
VpaK11BI GGWCC 7 cut(s) 4, 1137, 1740, 1832, 2461, 2636, 3368
XagI CCTNNNNNAGG 2 cut(s) 1892, 2643
XapI RAATTY 5 cut(s) 793, 1334, 2229, 2827, 3015
XbaI TCTAGA 4 cut(s) 845, 2515, 2846, 2990
XceI RCATGY 1 cut(s) 3526
XmnI GAANNNNTTC 2 cut(s) 1958, 2141
XspI CTAG 9 cut(s) 846, 1448, 1845, 2348, 2438, 2457, 2516, 2847, 2991
Zsp2I ATGCAT 2 cut(s) 825, 3128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.