Rh7BG332000
TCP Family

T-complex protein 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0005785
Physical Location & Seq
Reverse (-)
34392749 .. 34398648
5900 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG332000.1

Sequence Viewer

Length: 3405 bp
ATGGTCCCCGGAAAGGAAGCTTTTACCTTTACTTTCAAGGGTATTGGCTTCGAACACTATGAAAAGTTGTCAAACAAGGCCCGGACAAAGCCCAGAAGCCCCTCTCAATCTTCTTCTCAAGAGGAAGACCTTGGCGAGCGACTGGATGCCAAGCTCCAAGCTGCTGAGAGGAAAAGGTTGCTTATTTTGGAAAATGCTCAAATGCGCTTAGCTAAGTTGGATGAGTTGCGGCAAGCAGCTAAAAGTGGCGTAGAAATGCGTTTTGAGAAGGAACGACAGAAGCTTGGTTCAAAAGTTGAATTACGTTTTCAGCAGGCAGAGGCTAATAGAATGCTTATGCTCAAGGCTTATAGACAAAGAAGGGCCAACTTGAAGGAGAGGTCATCTCAGTCATTGTTGCGAAAGATGGCTTGGGAGAATAAGTACAAGGAGCGCGTGCGTGCTGCAATTAACCAAAAACGCGCAGCTGCTGAGAAAAAGCGACTGGTACTTTTGGAAGAAGAGAAGAAGAGGGCATACGCCAGGACGTTGCAAGTGCAAAGAGTAGCGAAGTCTGTCTCTCACCAACGTGAGATTGAAAGGAGAGCGAAAAGGGATCAGTTAGAAGACCGGTTGCAGAGGGCAAAGAGACAAAGAGCAGAATATCTCAAGCAAAGAGGAAAGATACAGAATTCATTTCAAGTCAGTTGGAATAGGATGCACAAACAGGCTGATCTCCTGTCTAGAAAGTTAGCAAGGTGTTGGAGACGGTTCCACAGGCTGAAGAGAACTACGTTTGCTTTGGCAAAAGCTTACAATACCTTGAAACTTGAGGAAAATAGCGTCAAGTCAATGCCGTTCGAGCAGCTTGCAATTCTGATTGAATCACCTGATACCCTTCAGACTGTGAAGGCTCTACTTGATCGACTTGAGAATCGGTTGAAAGTCTCCAAGACTGTAGCCTCTATAAACTATCCGTCCAGTATTGATAACATAGATCACCTTCTCAAACGAGTTGCTTCTCCCAAAAGGAGGACCACACCAAGGACATCTTTGAGAAGCAGGGAGGGAAAGAAAGCCTCTTCTGTCAGGGCCACAACCAGAACTTCAGCTAAATTAACAAGGTATCAAGTGAGAGTGGTTCTTTGCGCTTACATGATTTTGAGTCATCCAGATGCGGTTTTCAATGGTCAAGGAGAGCGTGAGACTTCTCTGGCCAAATCTGCAGAAGAATTTGTTAGAGAGTTTGAGTTGTTGGTGAAGACTATATTACAGGGCCCCGTCAACAGTTCTGAGGAAGAGTCTGATTCCACATCGCCCAAACGCTTAACCTTCAGATCTCAGCTAGGAGCTTTTGATAAAGCGTGGTGCTCCTACTTGAGTTGCTTTGTGGCGTGGAAGGTTAAGGATGCCCAGTTGTTGGAGGGAGATTTAGTGAGGGCAGCTTGCCAGATGGAGCTGTCTATGATTCAAACTTGCAAGATGACTTCAGAAGGACATACTGCCGATCTCACTCATGATATGAAGGCTATTCAGAAACAGGTCGCAGAAGACCAAAAGCTACTGAGAGAAAAGGTGCAACACTTAGGTGGAGAAGCTGGGATTGAGCGTATGACATCTGCTTTATCTGAAACACGGTCCAAGTATTTTGCAGCAAAGGAAAATGGAAGTCCATCAGGGTTGCAAACCACACAGTTTGTTTCTCCAAGCCCTCCAAGTTCATCAGCTGGTCCTTCTGTTTCTAGCTTAGATAAGAGGAGTAATCCAAGTCGTGTAGTTCGTTCCCTATTTCAGGAAGATGAATCTATTCGTCAGAAAGGATTAGAGTCAACTGAGATTGGATTGATTGTGAATGAGTTCTCTAAGACCAGTTTGGGTGGGCAGCTTGGATCTTCTTCCCAAAAGCCGGTCACTGAGAATGAACTGATTGTGAATGAGTTTCTCCATGAGCAAAACCAGGCTTTTGCTAATATTTTCAATGCTGCCGATGAAGATCAAAATAATGTCCAGTCAAAGATCAGAAACACGATGGAGAAGGCTTTCTGGGATGGCATAATGGAATCTGTAAACCAGGAAGAGCCCAACTATGACCGGATCATTCAACTGTTGGAGGAGGTGAGGGATGAAATTTGCACCATGGCTCCACAGAACTGGAAACAAGAAATTGTTGAAGCAATTGATGTGGATATTCTCTCTCAGGTGCTAAAATCTGGTAACCTGGACATTGATTACCTGGGAAGGATCCTAGAGTTTTCAATGGTCACTTTGCGAAGGCTCTCCGCTCCTGCGAATGATGATGAAATGATGGCCACTCTCCAGAGTTTAAGGAAAGAACTAGATGAGATATGTAATGCTAGAGACCAGTCCAACTGCTCAGGTGTCATTGCGATGATCAAGGGTCTGCGTTTTGTTCTAGAGCAGATTCAGGTGCTTAAACGTGAGATTAGCAAAGCACGTATAAGAATAATGGAGCCTTTGTTGAAGGGGCCCACTGGTTTGCAGTACCTTAGAAATGCCTTTGCCAATCGCTATGGACCTGCCTCAGATGCCAATACCTCTCTACCAGTGACGGTGCAGTGGCTTTCATCTGTGTGGAATTGCAAAGATCAGGAGTGGCAAGAACATAAGATTGCTTCCTCGACTTTGATGAGCAGTGATAATTTGTCTCATGAGTTTCTTCCTTCCACCACCCTTAGAAGTGGTGGAAGCTTTCTGTTGAAATCAAATTCTTCATCTCCGTCTTCTAGAAATAGCCAAGGTAATGTACAACCGGAATGCAAGGGAGAAGGAGTTGATTTGTTGGTGAGGCTTGGCTTGTTGAAGTTGGTGAGTGGTGTTTCTGGTCTGACTGGAGAGGCCCTGCCTGAAACTTTTATGCTCAACCTTTCTAGATTAAGGGCTGTGCAGGCTCAAATTCAGAAAATTATTGTTTCTTCCATAAGCATTCTTATTTGCCGGCAAACCATATTAAGCGAGGGGGTGATAACAACGCCCACAGACATGGAGGGCATCCTGTCAAGATGCATTGAGCGGCTTTTGGGGATATTGGACAGTGTTGAAGATGCAGGTATGGAAGAAATTGTTGAATCAATTAGTGATTTCTCCATCAATGGAAATGAAGTTGTGGACACTGAGAAAGTTCGGTCAAGAAAGATGGTTATAGCCCGGATGTTAGCAAAGAGCCTGCAAGCTGGGGATCCCGTGTTTGAGAGGGTTTCCCGTGCTGTTTATATTGCTGCAAGAGGAGTGGTTCTTGGGGGGAGTGGACCGCTTGGAAGAAAATTGGCTGAAACTGCACTCCGGCAAGTTGGAGCAGCGGTGCTGACTGACAGTGTGGTGGAAGCTGCTGAAGTTTTAGTTGTGGCTGCTACCATATCAGTTGGTGTTCATGGAGCATGGTATATACATATGACTGATAACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tcp11

Protein Analysis

1134

Amino Acids

127.47

Weight (kDa)

9.41

Isoelectric Point (pI)

53.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tcp11 PF05794 637 - 1130 1.4e-73 T-complex protein 11
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2524, 3035
AccB7I CCANNNNNTGG 1 cut(s) 1399
AccBSI CCGCTC 2 cut(s) 2261, 3010
AccII CGCG 2 cut(s) 435, 462
AciI CCGC 6 cut(s) 229, 1157, 2259, 3010, 3248, 3296
AclWI GGATC 7 cut(s) 603, 1876, 2081, 2215, 2228, 3170, 3183
AcoI YGGCCR 2 cut(s) 1194, 2286
AcsI RAATTY 5 cut(s) 670, 1211, 2106, 2704, 2892
AcuI CTGAAG 6 cut(s) 782, 863, 1071, 1297, 1452, 3348
AfaI GTAC 4 cut(s) 425, 489, 2483, 2745
AfiI CCNNNNNNNGG 6 cut(s) 13, 1011, 1023, 1399, 1771, 1885
AflIII ACRYGT 1 cut(s) 3399
AgeI ACCGGT 1 cut(s) 609
AjnI CCWGG 5 cut(s) 521, 1935, 2049, 2196, 2211
AjuI GAANNNNNNNTTGG 2 cut(s) 394, 426
AleI CACNNNNGTG 2 cut(s) 567, 1566
Alw21I GWGCWC 1 cut(s) 1352
Alw26I GTCTC 7 cut(s) 562, 622, 739, 931, 1178, 2331, 2649
AlwI GGATC 7 cut(s) 603, 1876, 2081, 2215, 2228, 3170, 3183
AlwNI CAGNNNCTG 1 cut(s) 470
AoxI GGCC 8 cut(s) 78, 363, 1071, 1194, 1255, 2286, 2465, 2835
ApaI GGGCCC 2 cut(s) 1259, 2469
ApoI RAATTY 5 cut(s) 670, 1211, 2106, 2704, 2892
AsiGI ACCGGT 1 cut(s) 609
Asp700I GAANNNNTTC 3 cut(s) 1785, 1835, 2018
AspLEI GCGC 4 cut(s) 207, 435, 464, 1130
AsuC2I CCSGG 3 cut(s) 9, 82, 3145
AsuHPI GGTGA 8 cut(s) 554, 858, 971, 1249, 2107, 2794, 2818, 2971
AsuII TTCGAA 1 cut(s) 51
AvaII GGWCC 6 cut(s) 4, 1014, 1617, 1709, 2513, 3245
BaeGI GKGCMC 2 cut(s) 1259, 2469
BalI TGGCCA 2 cut(s) 1196, 2288
BamHI GGATCC 2 cut(s) 2220, 3175
BanII GRGCYC 3 cut(s) 1259, 2061, 2469
BarI GAAGNNNNNNTAC 2 cut(s) 500, 532
BbsI GAAGAC 5 cut(s) 132, 612, 1247, 1536, 2712
Bbv12I GWGCWC 1 cut(s) 1352
BccI CCATC 8 cut(s) 400, 1426, 1660, 2002, 2021, 2278, 3092, 3127
BceAI ACGGC 1 cut(s) 820
BcgI CGANNNNNNTGC 2 cut(s) 830, 864
BciT130I CCWGG 5 cut(s) 523, 1937, 2051, 2198, 2213
BclI TGATCA 1 cut(s) 2370
BcnI CCSGG 3 cut(s) 9, 82, 3145
BcoDI GTCTC 7 cut(s) 562, 622, 739, 931, 1178, 2331, 2649
BfaI CTAG 9 cut(s) 723, 1325, 1722, 2225, 2315, 2334, 2393, 2724, 2868
BfmI CTRYAG 2 cut(s) 936, 1203
BfuAI ACCTGC 2 cut(s) 2524, 3035
BglII AGATCT 1 cut(s) 1316
BlpI GCTNAGC 1 cut(s) 208
Bme1390I CCNGG 8 cut(s) 9, 82, 523, 1937, 2051, 2198, 2213, 3145
Bme18I GGWCC 6 cut(s) 4, 1014, 1617, 1709, 2513, 3245
BmrFI CCNGG 8 cut(s) 9, 82, 523, 1937, 2051, 2198, 2213, 3145
BmrI ACTGGG 1 cut(s) 1387
BmsI GCATC 8 cut(s) 136, 687, 1144, 1378, 2515, 2990, 2997, 3031
BmuI ACTGGG 1 cut(s) 1387
BpiI GAAGAC 5 cut(s) 132, 612, 1247, 1536, 2712
BplI GAGNNNNNCTC 2 cut(s) 370, 402
BpmI CTGGAG 2 cut(s) 2279, 2850
Bpu10I CCTNAGC 1 cut(s) 2353
Bpu1102I GCTNAGC 1 cut(s) 208
Bpu14I TTCGAA 1 cut(s) 51
BpuEI CTTGAG 6 cut(s) 102, 326, 632, 830, 929, 1378
BpuMI CCSGG 3 cut(s) 9, 82, 3145
BsaAI YACGTR 1 cut(s) 2435
BsaBI GATNNNNATC 1 cut(s) 1971
BsaI GGTCTC 1 cut(s) 2331
BsaJI CCNNGG 6 cut(s) 7, 130, 1022, 2115, 2212, 2734
BsaWI WCCGGW 3 cut(s) 609, 2070, 2749
Bsc4I CCNNNNNNNGG 6 cut(s) 13, 1011, 1023, 1399, 1771, 1885
Bse118I RCCGGY 3 cut(s) 609, 1885, 2934
Bse3DI GCAATG 1 cut(s) 2361
Bse8I GATNNNNATC 1 cut(s) 1971
BseBI CCWGG 5 cut(s) 523, 1937, 2051, 2198, 2213
BseDI CCNNGG 6 cut(s) 7, 130, 1022, 2115, 2212, 2734
BseGI GGATG 9 cut(s) 151, 226, 702, 1147, 1393, 2032, 2107, 2988, 3153
BseJI GATNNNNATC 1 cut(s) 1971
BseLI CCNNNNNNNGG 6 cut(s) 13, 1011, 1023, 1399, 1771, 1885
BseMI GCAATG 1 cut(s) 2361
BseRI GAGGAG 3 cut(s) 1750, 2105, 3237
BseSI GKGCMC 2 cut(s) 1259, 2469
BseYI CCCAGC 2 cut(s) 1577, 3170
BsgI GTGCAG 3 cut(s) 2573, 2903, 3258
Bsh1236I CGCG 2 cut(s) 435, 462
BshFI GGCC 8 cut(s) 80, 365, 1073, 1196, 1257, 2288, 2467, 2837
BshTI ACCGGT 1 cut(s) 609
BsiHKAI GWGCWC 1 cut(s) 1352
BsiSI CCGG 9 cut(s) 9, 82, 610, 1886, 2071, 2750, 2935, 3145, 3280
BslI CCNNNNNNNGG 6 cut(s) 13, 1011, 1023, 1399, 1771, 1885
BsmAI GTCTC 7 cut(s) 562, 622, 739, 931, 1178, 2331, 2649
BsmBI CGTCTC 1 cut(s) 739
BsmI GAATGC 3 cut(s) 336, 2759, 2922
BsnI GGCC 8 cut(s) 80, 365, 1073, 1196, 1257, 2288, 2467, 2837
Bso31I GGTCTC 1 cut(s) 2331
Bsp119I TTCGAA 1 cut(s) 51
Bsp120I GGGCCC 2 cut(s) 1255, 2465
Bsp1286I GDGCHC 4 cut(s) 1259, 1352, 2061, 2469
Bsp1407I TGTACA 1 cut(s) 2743
Bsp1720I GCTNAGC 1 cut(s) 208
Bsp19I CCATGG 1 cut(s) 2115
BspACI CCGC 6 cut(s) 229, 1157, 2259, 3010, 3248, 3296
BspANI GGCC 8 cut(s) 80, 365, 1073, 1196, 1257, 2288, 2467, 2837
BspFNI CGCG 2 cut(s) 435, 462
BspHI TCATGA 2 cut(s) 1495, 2647
BspMAI CTGCAG 1 cut(s) 1207
BspMI ACCTGC 2 cut(s) 2524, 3035
BspPI GGATC 7 cut(s) 603, 1876, 2081, 2215, 2228, 3170, 3183
BspQI GCTCTTC 1 cut(s) 2049
BspT104I TTCGAA 1 cut(s) 51
BspTNI GGTCTC 1 cut(s) 2331
BsrBI CCGCTC 2 cut(s) 2261, 3010
BsrDI GCAATG 1 cut(s) 2361
BsrFI RCCGGY 3 cut(s) 609, 1885, 2934
BsrGI TGTACA 1 cut(s) 2743
BssAI RCCGGY 3 cut(s) 609, 1885, 2934
BssECI CCNNGG 6 cut(s) 7, 130, 1022, 2115, 2212, 2734
BssT1I CCWWGG 4 cut(s) 130, 1022, 2115, 2734
Bst2UI CCWGG 5 cut(s) 523, 1937, 2051, 2198, 2213
Bst6I CTCTTC 6 cut(s) 495, 503, 758, 1066, 1272, 2049
BstAUI TGTACA 1 cut(s) 2743
BstBAI YACGTR 1 cut(s) 2435
BstBI TTCGAA 1 cut(s) 51
BstDSI CCRYGG 1 cut(s) 2115
BstEII GGTNACC 1 cut(s) 2192
BstENI CCTNNNNNAGG 1 cut(s) 1769
BstF5I GGATG 9 cut(s) 151, 226, 702, 1147, 1393, 2032, 2107, 2988, 3153
BstFNI CGCG 2 cut(s) 435, 462
BstHHI GCGC 4 cut(s) 207, 435, 464, 1130
BstMAI GTCTC 7 cut(s) 562, 622, 739, 931, 1178, 2331, 2649
BstMWI GCNNNNNNNGC 5 cut(s) 841, 1202, 2525, 2885, 3272
BstNI CCWGG 5 cut(s) 523, 1937, 2051, 2198, 2213
BstNSI RCATGY 1 cut(s) 3403
BstPI GGTNACC 1 cut(s) 2192
BstSCI CCNGG 8 cut(s) 7, 80, 521, 1935, 2049, 2196, 2211, 3143
BstSFI CTRYAG 2 cut(s) 936, 1203
BstSLI GKGCMC 2 cut(s) 1259, 2469
BstUI CGCG 2 cut(s) 435, 462
BstV2I GAAGAC 5 cut(s) 132, 612, 1247, 1536, 2712
BstX2I RGATCY 4 cut(s) 1316, 1868, 2220, 3175
BstXI CCANNNNNNTGG 2 cut(s) 2130, 2980
BstYI RGATCY 4 cut(s) 1316, 1868, 2220, 3175
BsuRI GGCC 8 cut(s) 80, 365, 1073, 1196, 1257, 2288, 2467, 2837
BtgI CCRYGG 1 cut(s) 2115
BtgZI GCGATG 2 cut(s) 1278, 2381
BtsCI GGATG 9 cut(s) 151, 226, 702, 1147, 1393, 2032, 2107, 2988, 3153
BtsI GCAGTG 2 cut(s) 2561, 2638
BtsIMutI CAGTG 8 cut(s) 1890, 2469, 2550, 2561, 2638, 3037, 3108, 3316
BveI ACCTGC 2 cut(s) 2524, 3035
CaiI CAGNNNCTG 1 cut(s) 470
CciI TCATGA 2 cut(s) 1495, 2647
CfoI GCGC 4 cut(s) 207, 435, 464, 1130
Cfr10I RCCGGY 3 cut(s) 609, 1885, 2934
CseI GACGC 1 cut(s) 811
Csp6I GTAC 4 cut(s) 424, 488, 2482, 2744
CspAI ACCGGT 1 cut(s) 609
CspCI CAANNNNNGTGG 6 cut(s) 1657, 1692, 2142, 2177, 3207, 3242
CviAII CATG 9 cut(s) 1135, 1496, 1925, 2116, 2648, 2980, 3368, 3375, 3400
CviQI GTAC 4 cut(s) 424, 488, 2482, 2744
EaeI YGGCCR 2 cut(s) 1194, 2286
Eam1104I CTCTTC 6 cut(s) 495, 503, 758, 1066, 1272, 2049
EarI CTCTTC 6 cut(s) 495, 503, 758, 1066, 1272, 2049
Eco130I CCWWGG 4 cut(s) 130, 1022, 2115, 2734
Eco24I GRGCYC 3 cut(s) 1259, 2061, 2469
Eco31I GGTCTC 1 cut(s) 2331
Eco47I GGWCC 6 cut(s) 4, 1014, 1617, 1709, 2513, 3245
Eco57I CTGAAG 6 cut(s) 782, 863, 1071, 1297, 1452, 3348
Eco91I GGTNACC 1 cut(s) 2192
EcoNI CCTNNNNNAGG 1 cut(s) 1769
EcoO109I RGGNCCY 4 cut(s) 1255, 1256, 2465, 2836
EcoO65I GGTNACC 1 cut(s) 2192
EcoRI GAATTC 1 cut(s) 670
EcoRII CCWGG 5 cut(s) 521, 1935, 2049, 2196, 2211
EcoT14I CCWWGG 4 cut(s) 130, 1022, 2115, 2734
EcoT22I ATGCAT 1 cut(s) 3005
EcoT38I GRGCYC 3 cut(s) 1259, 2061, 2469
ErhI CCWWGG 4 cut(s) 130, 1022, 2115, 2734
Esp3I CGTCTC 1 cut(s) 739
FaeI CATG 9 cut(s) 1138, 1499, 1928, 2119, 2651, 2983, 3371, 3378, 3403
FalI AAGNNNNNCTT 2 cut(s) 1015, 1047
FatI CATG 9 cut(s) 1134, 1495, 1924, 2115, 2647, 2979, 3367, 3374, 3399
FauNDI CATATG 1 cut(s) 3387
FbaI TGATCA 1 cut(s) 2370
FokI GGATG 9 cut(s) 158, 233, 709, 1134, 1400, 2039, 2114, 2975, 3160
FriOI GRGCYC 3 cut(s) 1259, 2061, 2469
FspBI CTAG 9 cut(s) 723, 1325, 1722, 2225, 2315, 2334, 2393, 2724, 2868
GlaI GCGC 4 cut(s) 206, 434, 463, 1129
GsaI CCCAGC 2 cut(s) 1581, 3174
GsuI CTGGAG 2 cut(s) 2279, 2850
HaeIII GGCC 8 cut(s) 80, 365, 1073, 1196, 1257, 2288, 2467, 2837
HapII CCGG 9 cut(s) 9, 82, 610, 1886, 2071, 2750, 2935, 3145, 3280
HgaI GACGC 1 cut(s) 811
HhaI GCGC 4 cut(s) 207, 435, 464, 1130
Hin1II CATG 9 cut(s) 1138, 1499, 1928, 2119, 2651, 2983, 3371, 3378, 3403
Hin6I GCGC 4 cut(s) 205, 433, 462, 1128
HinP1I GCGC 4 cut(s) 205, 433, 462, 1128
HincII GTYRAC 2 cut(s) 1264, 1809
HindII GTYRAC 2 cut(s) 1264, 1809
HindIII AAGCTT 4 cut(s) 18, 281, 789, 2686
HpaII CCGG 9 cut(s) 9, 82, 610, 1886, 2071, 2750, 2935, 3145, 3280
HphI GGTGA 8 cut(s) 554, 858, 971, 1249, 2107, 2794, 2818, 2971
Hpy166II GTNNAC 5 cut(s) 1264, 1809, 2047, 3106, 3245
Hpy8I GTNNAC 5 cut(s) 1264, 1809, 2047, 3106, 3245
HpyCH4IV ACGT 6 cut(s) 304, 527, 568, 773, 2416, 2434
HpyF10VI GCNNNNNNNGC 5 cut(s) 841, 1202, 2525, 2885, 3272
HpySE526I ACGT 6 cut(s) 304, 527, 568, 773, 2416, 2434
Hsp92II CATG 9 cut(s) 1138, 1499, 1928, 2119, 2651, 2983, 3371, 3378, 3403
HspAI GCGC 4 cut(s) 205, 433, 462, 1128
KroI GCCGGC 1 cut(s) 2934
KroNI GCCGGC 1 cut(s) 2936
Ksp22I TGATCA 1 cut(s) 2370
LguI GCTCTTC 1 cut(s) 2049
LweI GCATC 8 cut(s) 136, 687, 1144, 1378, 2515, 2990, 2997, 3031
MaeI CTAG 9 cut(s) 723, 1325, 1722, 2225, 2315, 2334, 2393, 2724, 2868
MaeII ACGT 6 cut(s) 304, 527, 568, 773, 2416, 2434
MaeIII GTNAC 4 cut(s) 1888, 2192, 2239, 2545
MbiI CCGCTC 2 cut(s) 2261, 3010
MfeI CAATTG 1 cut(s) 2154
MflI RGATCY 4 cut(s) 1316, 1868, 2220, 3175
MhlI GDGCHC 4 cut(s) 1259, 1352, 2061, 2469
MlsI TGGCCA 2 cut(s) 1196, 2288
MluNI TGGCCA 2 cut(s) 1196, 2288
MlyI GAGTC 3 cut(s) 1153, 1289, 1814
MmeI TCCRAC 7 cut(s) 198, 668, 722, 1380, 2067, 2370, 3268
Mox20I TGGCCA 2 cut(s) 1196, 2288
Mph1103I ATGCAT 1 cut(s) 3005
MroNI GCCGGC 1 cut(s) 2934
MroXI GAANNNNTTC 3 cut(s) 1785, 1835, 2018
MscI TGGCCA 2 cut(s) 1196, 2288
MseI TTAA 8 cut(s) 450, 1097, 1307, 1383, 2303, 2412, 2873, 2948
MslI CAYNNNNRTG 6 cut(s) 567, 1152, 1566, 2366, 2569, 2978
Msp20I TGGCCA 2 cut(s) 1196, 2288
MspA1I CMGCKG 3 cut(s) 467, 1706, 3296
MspI CCGG 9 cut(s) 9, 82, 610, 1886, 2071, 2750, 2935, 3145, 3280
MspR9I CCNGG 8 cut(s) 9, 82, 523, 1937, 2051, 2198, 2213, 3145
MunI CAATTG 1 cut(s) 2154
Mva1269I GAATGC 3 cut(s) 336, 2759, 2922
MvaI CCWGG 5 cut(s) 523, 1937, 2051, 2198, 2213
MvnI CGCG 2 cut(s) 435, 462
MwoI GCNNNNNNNGC 5 cut(s) 841, 1202, 2525, 2885, 3272
NaeI GCCGGC 1 cut(s) 2936
NciI CCSGG 3 cut(s) 9, 82, 3145
NcoI CCATGG 1 cut(s) 2115
NdeI CATATG 1 cut(s) 3387
NgoMIV GCCGGC 1 cut(s) 2934
NlaIII CATG 9 cut(s) 1138, 1499, 1928, 2119, 2651, 2983, 3371, 3378, 3403
NmuCI GTSAC 3 cut(s) 1888, 2239, 2545
NsiI ATGCAT 1 cut(s) 3005
NspI RCATGY 1 cut(s) 3403
NspV TTCGAA 1 cut(s) 51
OliI CACNNNNGTG 2 cut(s) 567, 1566
PagI TCATGA 2 cut(s) 1495, 2647
PciI ACATGT 1 cut(s) 3399
PciSI GCTCTTC 1 cut(s) 2049
PcsI WCGNNNNNNNCGW 1 cut(s) 1756
PctI GAATGC 3 cut(s) 336, 2759, 2922
PdiI GCCGGC 1 cut(s) 2936
PdmI GAANNNNTTC 3 cut(s) 1785, 1835, 2018
PfeI GAWTC 8 cut(s) 863, 913, 1286, 1447, 1781, 2039, 2401, 3065
PflMI CCANNNNNTGG 1 cut(s) 1399
PinAI ACCGGT 1 cut(s) 609
PleI GAGTC 3 cut(s) 1152, 1288, 1813
PpsI GAGTC 3 cut(s) 1152, 1288, 1813
Ppu21I YACGTR 1 cut(s) 2435
PscI ACATGT 1 cut(s) 3399
Psp6I CCWGG 5 cut(s) 521, 1935, 2049, 2196, 2211
PspEI GGTNACC 1 cut(s) 2192
PspFI CCCAGC 2 cut(s) 1577, 3170
PspGI CCWGG 5 cut(s) 521, 1935, 2049, 2196, 2211
PspOMI GGGCCC 2 cut(s) 1255, 2465
PstI CTGCAG 1 cut(s) 1207
PstNI CAGNNNCTG 1 cut(s) 470
PsuI RGATCY 4 cut(s) 1316, 1868, 2220, 3175
PvuII CAGCTG 2 cut(s) 467, 1706
RsaI GTAC 4 cut(s) 425, 489, 2483, 2745
RsaNI GTAC 4 cut(s) 424, 488, 2482, 2744
RseI CAYNNNNRTG 6 cut(s) 567, 1152, 1566, 2366, 2569, 2978
SapI GCTCTTC 1 cut(s) 2049
SaqAI TTAA 8 cut(s) 450, 1097, 1307, 1383, 2303, 2412, 2873, 2948
SchI GAGTC 3 cut(s) 1153, 1289, 1814
ScrFI CCNGG 8 cut(s) 9, 82, 523, 1937, 2051, 2198, 2213, 3145
SduI GDGCHC 4 cut(s) 1259, 1352, 2061, 2469
SfaNI GCATC 8 cut(s) 136, 687, 1144, 1378, 2515, 2990, 2997, 3031
SfcI CTRYAG 2 cut(s) 936, 1203
SfuI TTCGAA 1 cut(s) 51
SinI GGWCC 6 cut(s) 4, 1014, 1617, 1709, 2513, 3245
SmiMI CAYNNNNRTG 6 cut(s) 567, 1152, 1566, 2366, 2569, 2978
SmlI CTYRAG 6 cut(s) 117, 341, 647, 809, 908, 1357
SmoI CTYRAG 6 cut(s) 117, 341, 647, 809, 908, 1357
SsiI CCGC 6 cut(s) 229, 1157, 2259, 3010, 3248, 3296
SspI AATATT 1 cut(s) 1951
SspMI CTAG 9 cut(s) 723, 1325, 1722, 2225, 2315, 2334, 2393, 2724, 2868
StyD4I CCNGG 8 cut(s) 7, 80, 521, 1935, 2049, 2196, 2211, 3143
StyI CCWWGG 4 cut(s) 130, 1022, 2115, 2734
TaiI ACGT 6 cut(s) 307, 530, 571, 776, 2419, 2437
TaqI TCGA 4 cut(s) 51, 840, 904, 2618
TaqII GACCGA 1 cut(s) 3111
TatI WGTACW 2 cut(s) 423, 2743
TauI GCSGC 2 cut(s) 232, 3013
TfiI GAWTC 8 cut(s) 863, 913, 1286, 1447, 1781, 2039, 2401, 3065
Tru1I TTAA 8 cut(s) 450, 1097, 1307, 1383, 2303, 2412, 2873, 2948
Tru9I TTAA 8 cut(s) 450, 1097, 1307, 1383, 2303, 2412, 2873, 2948
TscAI CASTG 8 cut(s) 1897, 2476, 2550, 2561, 2638, 3037, 3115, 3316
TseFI GTSAC 3 cut(s) 1888, 2239, 2545
Tsp45I GTSAC 3 cut(s) 1888, 2239, 2545
TspGWI ACGGA 2 cut(s) 945, 2706
TspRI CASTG 8 cut(s) 1897, 2476, 2550, 2561, 2638, 3037, 3115, 3316
Van91I CCANNNNNTGG 1 cut(s) 1399
VpaK11BI GGWCC 6 cut(s) 4, 1014, 1617, 1709, 2513, 3245
XagI CCTNNNNNAGG 1 cut(s) 1769
XapI RAATTY 5 cut(s) 670, 1211, 2106, 2704, 2892
XbaI TCTAGA 4 cut(s) 722, 2392, 2723, 2867
XceI RCATGY 1 cut(s) 3403
XmnI GAANNNNTTC 3 cut(s) 1785, 1835, 2018
XspI CTAG 9 cut(s) 723, 1325, 1722, 2225, 2315, 2334, 2393, 2724, 2868
Zsp2I ATGCAT 1 cut(s) 3005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.