Rmu_sc0032411.1_g000003
TCP Family

T-complex protein 11

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0032411.1
Physical Location & Seq
Reverse (-)
6710 .. 13309
6600 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0032411.1_g000003.1.cds

Sequence Viewer

Length: 3588 bp
atggtccccggtggtgtagttttggatttcccggccggtgaaacgccgtcgtctcctccaagactaccccgcaggctcagacggaggctcgaccttgttcagtcctccaagactcccaacactgtcgagcatatccaaaccaagcttcgactcgccgatcttcgccgccaggaacactatgaaaagttgtcaaacaaggcccggacaaagcccagaagcccctctcgatcttcttctcaagaggaagaccttggcgagcgactggatgccaagctccaggctgctgagaagaaaaggttgcttattttggaaagtgctcaaatgcgcttagctaagttggatgagttgcggcaagcagctaaaagtggcgtagaaatgcgttttgagaaggaacgacagaagcttggttcaaaagttgaattacgttttcagcaggcggaggcaaatagaatgcttatgctcaaggcttatagacagagaagggccaacttgaaggagaggtcatctcagtccttgttgcgaaagatggcttgggagaataagtacaaggagcgcgtgcgtgctgcaattaaccaaaaacgcgcagctgctgagaaaaagcgactggtacttttggaagaagagaagaagagggcatacgccaggacgttgcaagtgcaaagagtagcaaagtctgtctctcaccaacgtgagattgaaaggagagcgaaaagggatcagttagaagaccggttgcagagggcaaagagacaaagagcagaatatctcaagcaaagaggaaagatacagaattcatttcaagtcagttggaataggatgcacaaacaggctgatttcctgtctagaaagttagcaaggtgttggagacggttccacaggctcaagagaactacgtttgctttggcaaaagcttacaataccttgaaacttgaggaaaacagcgtcaagtcaatgccgttcgagcagcttgcaattctgattgaatcacctgatacccttcagactgggaaggctctacttgatcgacttgagaatcggttgaaagtctcgaagactgtagcctctataaactatccgtccagtattgataacattgatcaccttctcaaacgagttgcttctcccaaaaggaggaccacaccaaggacatctttgagaagcagggagggaaagaaagcctcttctgtcagggccacaaccagaacttcagctaaattaacaaggtatcaagtgagagtggttctttgcgcttacatgattttgagtcacccagatgcggttttcaatggtcaaggagagcgtgagacttctctggccaaatctgcagaagaatttgttagagagtttgagttgttggtgaagactatattacagggcccggtcaacagttctgaggaagagtctgattccacatcgcccaaacgcttaaccttcagatctcagctaggagcttttgataaagcgtggtgctcctacttgagttgctttgtggcatggaaggttaaggatgcccagttgttggagggagatttagtgagggcagcttgccagatggagctgtctatgattcaaacttgcaagatgacttcagaaggacatactgccgatctcactcatgatatgaaggctattcagaaacaggtcgcagaagaccaaaagctactgagagaaaaggtgcaacacttaagtggagacgctgggattgagcgtatgacatctgctttatctgaaacacggtccaagtattttgcagcaagggaaaatggaagtccatcagggttgcaaaccactcagtttgtttctccaagccctccaagttcatcagctggtccttctgtttctagcttagataagaagagaaatccaagtcgtgtagttcgttccctatttcaggaagatgaatctattcgtccgaaaggattagagtcaactgagattggatcgattgtgaatgagttctctaagaccaatttgagtgggcagctcggatcttcttcccaaaagccggtcactgagaatgaactgattgtgaatgagtttctccatgagcaaaaccaggcttttgctaatattttcaatgctgccgatgaagatcaaaataatgtccagtcaaagatcagaaacactatggagaaggctttctgggatggcataatggaatctgtaaaccaggaagagcccaactatgaccggatcattcaactgttggaggaggtgagggatgaaatttgcaccatggctccacagagctggaaacaagaaattgttgaagcaattgatgtggatattctctctcaggtgctaaaatctggtaacctggatattgattacctgggaaagatcctagagttttcaatggtcactttgcgaaagctctctgctcctgcgaatgatgatgaaatgatggccactctccagagtttaaggaaagaactagatgagatatgtaatgctagggaccagtccaactgctcaggtgtcattgctatgatcaagggtctgcgttttgttctagagcagattcaggtgcttaaacgtgagattagcaaagcacgtataagaataatggagcctttgttgaaggggcccactggtttgcagtaccttagaaatgcctttgccaatcgctatggacctgcctcagatgccaatacctctctaccagtgacggtgcagtggctttcatccgtgtggaattgcaaagatcaggagtggcaagaacataagattgcttcctcgactttgatgagcagtgataatttgtctcatgagtttcttccttccaccacccttagaagtggtggaagctttctgttgaaatcaaattcttcatcgctgtcttctagaaatagccaaggtaatgtacaaccggaatgcaagggagaaggagttgatttgttggtgaggctcggcttgttgaagttggtgagtggtgtttctggtctgactgaagaggccctgcctgaaacttttatgcttaacctttcaagattaagggctgtgcaggctcaaattcagaaaattattgtttcttccataagcattcttatttgccggcaaaccatattaagcgagggggtgataacaatgcccaccgacatggagggcatcctgtcaagatgcattgagcggcttttggggatactggacagtgttgaagatgcaggtatggaagaaattgttgaatcaatcagtgatttctccatcaatggaaatgaagttgtggacactgagaaagttcggtcaagaaagatggttatagcccggatgttagcaaagagcctgcaagctggggatcccgtgtttgagagggtttcccgtgctgtttatatggctgcaagaggagcggttcttggggggagtggacctgttggaagaaaattggctgaaactgcactccggcaagttggagcagcggtgctgactgacagtgtggtggaagctactgaagttttagttgtggctgctaccatatcagttggtgttcatggagcatgcgttgtgtacaaggccccacaacctatcctcagcggcctatcctcagtggcttccgtccacatcaagagagttgagtcatcaaggcagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1195

Amino Acids

134.17

Weight (kDa)

9.59

Isoelectric Point (pI)

58.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2644, 3155
AccB7I CCANNNNNTGG 1 cut(s) 1519
AccBSI CCGCTC 2 cut(s) 3130, 3347
AccII CGCG 2 cut(s) 555, 582
AciI CCGC 9 cut(s) 70, 166, 349, 437, 1277, 3130, 3347, 3416, 3531
AclWI GGATC 7 cut(s) 723, 1948, 1996, 2201, 2335, 3290, 3303
AcoI YGGCCR 3 cut(s) 33, 1314, 2406
AcsI RAATTY 5 cut(s) 790, 1331, 2226, 2824, 3012
AcuI CTGAAG 6 cut(s) 983, 1191, 1417, 1572, 2970, 3468
AfaI GTAC 5 cut(s) 545, 609, 2603, 2865, 3506
AfiI CCNNNNNNNGG 6 cut(s) 1131, 1143, 1276, 1519, 1891, 2005
AflII CTTAAG 1 cut(s) 1684
AgeI ACCGGT 1 cut(s) 729
AjnI CCWGG 7 cut(s) 168, 276, 641, 2055, 2169, 2316, 2331
AjuI GAANNNNNNNTTGG 4 cut(s) 129, 161, 514, 546
AleI CACNNNNGTG 2 cut(s) 687, 1686
Alw21I GWGCWC 2 cut(s) 319, 1472
Alw26I GTCTC 8 cut(s) 57, 682, 742, 859, 1051, 1298, 1686, 2769
AlwI GGATC 7 cut(s) 723, 1948, 1996, 2201, 2335, 3290, 3303
AlwNI CAGNNNCTG 1 cut(s) 590
ApaI GGGCCC 2 cut(s) 1379, 2589
ApoI RAATTY 5 cut(s) 790, 1331, 2226, 2824, 3012
AsiGI ACCGGT 1 cut(s) 729
Asp700I GAANNNNTTC 3 cut(s) 1905, 1955, 2138
AspLEI GCGC 4 cut(s) 327, 555, 584, 1250
AsuC2I CCSGG 5 cut(s) 9, 32, 202, 1379, 3265
AvaII GGWCC 7 cut(s) 4, 1134, 1737, 1829, 2458, 2633, 3365
BaeGI GKGCMC 2 cut(s) 1379, 2589
BalI TGGCCA 2 cut(s) 1316, 2408
BamHI GGATCC 1 cut(s) 3295
BanII GRGCYC 3 cut(s) 1379, 2181, 2589
BarI GAAGNNNNNNTAC 2 cut(s) 620, 652
BbsI GAAGAC 6 cut(s) 252, 732, 1058, 1367, 1656, 2832
Bbv12I GWGCWC 2 cut(s) 319, 1472
BbvCI CCTCAGC 1 cut(s) 3527
BccI CCATC 7 cut(s) 520, 1546, 1780, 2141, 2398, 3212, 3247
BceAI ACGGC 2 cut(s) 31, 940
BcgI CGANNNNNNTGC 2 cut(s) 950, 984
BciT130I CCWGG 7 cut(s) 170, 278, 643, 2057, 2171, 2318, 2333
BciVI GTATCC 1 cut(s) 3135
BclI TGATCA 2 cut(s) 1096, 2490
BcnI CCSGG 5 cut(s) 9, 32, 202, 1379, 3265
BcoDI GTCTC 8 cut(s) 57, 682, 742, 859, 1051, 1298, 1686, 2769
BfaI CTAG 8 cut(s) 843, 1445, 1842, 2345, 2435, 2454, 2513, 2844
BfmI CTRYAG 2 cut(s) 1056, 1323
BfrI CTTAAG 1 cut(s) 1684
BfuAI ACCTGC 2 cut(s) 2644, 3155
BfuI GTATCC 1 cut(s) 3135
BglII AGATCT 1 cut(s) 1436
BlpI GCTNAGC 1 cut(s) 328
Bme18I GGWCC 7 cut(s) 4, 1134, 1737, 1829, 2458, 2633, 3365
BmrI ACTGGG 2 cut(s) 1014, 1507
BmsI GCATC 8 cut(s) 256, 807, 1264, 1498, 2635, 3110, 3117, 3151
BmuI ACTGGG 2 cut(s) 1014, 1507
BpiI GAAGAC 6 cut(s) 252, 732, 1058, 1367, 1656, 2832
BplI GAGNNNNNCTC 2 cut(s) 490, 522
BpmI CTGGAG 2 cut(s) 260, 2399
Bpu10I CCTNAGC 2 cut(s) 2473, 3527
Bpu1102I GCTNAGC 1 cut(s) 328
BpuEI CTTGAG 7 cut(s) 222, 446, 752, 866, 950, 1049, 1498
BpuMI CCSGG 5 cut(s) 9, 32, 202, 1379, 3265
Bsa29I ATCGAT 1 cut(s) 1943
BsaAI YACGTR 1 cut(s) 2555
BsaBI GATNNNNATC 1 cut(s) 2091
BsaJI CCNNGG 6 cut(s) 7, 250, 1142, 2235, 2332, 2854
BsaWI WCCGGW 3 cut(s) 729, 2190, 2869
Bsc4I CCNNNNNNNGG 6 cut(s) 1131, 1143, 1276, 1519, 1891, 2005
Bse118I RCCGGY 4 cut(s) 35, 729, 2005, 3054
Bse3DI GCAATG 1 cut(s) 2481
Bse8I GATNNNNATC 1 cut(s) 2091
BseBI CCWGG 7 cut(s) 170, 278, 643, 2057, 2171, 2318, 2333
BseCI ATCGAT 1 cut(s) 1943
BseDI CCNNGG 6 cut(s) 7, 250, 1142, 2235, 2332, 2854
BseGI GGATG 9 cut(s) 271, 346, 822, 1513, 2152, 2227, 2684, 3108, 3273
BseJI GATNNNNATC 1 cut(s) 2091
BseLI CCNNNNNNNGG 6 cut(s) 1131, 1143, 1276, 1519, 1891, 2005
BseMI GCAATG 1 cut(s) 2481
BseRI GAGGAG 3 cut(s) 45, 2225, 3357
BseSI GKGCMC 2 cut(s) 1379, 2589
BseX3I CGGCCG 1 cut(s) 33
BseYI CCCAGC 2 cut(s) 1697, 3290
BsgI GTGCAG 3 cut(s) 2693, 3023, 3378
Bsh1236I CGCG 2 cut(s) 555, 582
Bsh1285I CGRYCG 1 cut(s) 36
BshTI ACCGGT 1 cut(s) 729
BshVI ATCGAT 1 cut(s) 1943
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 2 cut(s) 319, 1472
BslFI GGGAC 1 cut(s) 2471
BslI CCNNNNNNNGG 6 cut(s) 1131, 1143, 1276, 1519, 1891, 2005
BsmAI GTCTC 8 cut(s) 57, 682, 742, 859, 1051, 1298, 1686, 2769
BsmBI CGTCTC 3 cut(s) 57, 859, 1686
BsmFI GGGAC 1 cut(s) 2471
BsmI GAATGC 3 cut(s) 456, 2879, 3042
Bsp120I GGGCCC 2 cut(s) 1375, 2585
Bsp1286I GDGCHC 5 cut(s) 319, 1379, 1472, 2181, 2589
Bsp1407I TGTACA 2 cut(s) 2863, 3504
Bsp1720I GCTNAGC 1 cut(s) 328
Bsp19I CCATGG 1 cut(s) 2235
BspACI CCGC 9 cut(s) 70, 166, 349, 437, 1277, 3130, 3347, 3416, 3531
BspDI ATCGAT 1 cut(s) 1943
BspFNI CGCG 2 cut(s) 555, 582
BspHI TCATGA 2 cut(s) 1615, 2767
BspMAI CTGCAG 1 cut(s) 1327
BspMI ACCTGC 2 cut(s) 2644, 3155
BspPI GGATC 7 cut(s) 723, 1948, 1996, 2201, 2335, 3290, 3303
BspQI GCTCTTC 1 cut(s) 2169
BspTI CTTAAG 1 cut(s) 1684
BsrBI CCGCTC 2 cut(s) 3130, 3347
BsrDI GCAATG 1 cut(s) 2481
BsrFI RCCGGY 4 cut(s) 35, 729, 2005, 3054
BsrGI TGTACA 2 cut(s) 2863, 3504
BssAI RCCGGY 4 cut(s) 35, 729, 2005, 3054
BssECI CCNNGG 6 cut(s) 7, 250, 1142, 2235, 2332, 2854
BssT1I CCWWGG 4 cut(s) 250, 1142, 2235, 2854
Bst2UI CCWGG 7 cut(s) 170, 278, 643, 2057, 2171, 2318, 2333
Bst4CI ACNGT 9 cut(s) 124, 870, 1057, 1388, 1737, 2205, 2671, 3152, 3431
Bst6I CTCTTC 7 cut(s) 615, 623, 1186, 1392, 1850, 2169, 2946
BstAFI CTTAAG 1 cut(s) 1684
BstAUI TGTACA 2 cut(s) 2863, 3504
BstBAI YACGTR 1 cut(s) 2555
BstDSI CCRYGG 1 cut(s) 2235
BstEII GGTNACC 1 cut(s) 2312
BstENI CCTNNNNNAGG 1 cut(s) 1889
BstF5I GGATG 9 cut(s) 271, 346, 822, 1513, 2152, 2227, 2684, 3108, 3273
BstFNI CGCG 2 cut(s) 555, 582
BstHHI GCGC 4 cut(s) 327, 555, 584, 1250
BstMAI GTCTC 8 cut(s) 57, 682, 742, 859, 1051, 1298, 1686, 2769
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 6 cut(s) 961, 1322, 2645, 3005, 3344, 3392
BstNI CCWGG 7 cut(s) 170, 278, 643, 2057, 2171, 2318, 2333
BstNSI RCATGY 1 cut(s) 3498
BstPI GGTNACC 1 cut(s) 2312
BstSFI CTRYAG 2 cut(s) 1056, 1323
BstSLI GKGCMC 2 cut(s) 1379, 2589
BstUI CGCG 2 cut(s) 555, 582
BstV2I GAAGAC 6 cut(s) 252, 732, 1058, 1367, 1656, 2832
BstX2I RGATCY 4 cut(s) 1436, 1988, 2340, 3295
BstXI CCANNNNNNTGG 2 cut(s) 2250, 3100
BstYI RGATCY 4 cut(s) 1436, 1988, 2340, 3295
BstZI CGGCCG 1 cut(s) 33
Bsu15I ATCGAT 1 cut(s) 1943
BsuI GTATCC 1 cut(s) 3135
BsuTUI ATCGAT 1 cut(s) 1943
BtgI CCRYGG 1 cut(s) 2235
BtgZI GCGATG 2 cut(s) 1398, 2817
BtsCI GGATG 9 cut(s) 271, 346, 822, 1513, 2152, 2227, 2684, 3108, 3273
BtsI GCAGTG 2 cut(s) 2681, 2758
BveI ACCTGC 2 cut(s) 2644, 3155
CaiI CAGNNNCTG 1 cut(s) 590
CciI TCATGA 2 cut(s) 1615, 2767
CfoI GCGC 4 cut(s) 327, 555, 584, 1250
Cfr10I RCCGGY 4 cut(s) 35, 729, 2005, 3054
ClaI ATCGAT 1 cut(s) 1943
CseI GACGC 2 cut(s) 931, 1703
Csp6I GTAC 5 cut(s) 544, 608, 2602, 2864, 3505
CspAI ACCGGT 1 cut(s) 729
CspCI CAANNNNNGTGG 6 cut(s) 1777, 1812, 1957, 1992, 2262, 2297
CviAII CATG 9 cut(s) 1255, 1494, 1616, 2045, 2236, 2768, 3100, 3488, 3495
CviQI GTAC 5 cut(s) 544, 608, 2602, 2864, 3505
EaeI YGGCCR 3 cut(s) 33, 1314, 2406
EagI CGGCCG 1 cut(s) 33
Eam1104I CTCTTC 7 cut(s) 615, 623, 1186, 1392, 1850, 2169, 2946
EarI CTCTTC 7 cut(s) 615, 623, 1186, 1392, 1850, 2169, 2946
EciI GGCGGA 1 cut(s) 452
EclXI CGGCCG 1 cut(s) 33
Eco130I CCWWGG 4 cut(s) 250, 1142, 2235, 2854
Eco24I GRGCYC 3 cut(s) 1379, 2181, 2589
Eco47I GGWCC 7 cut(s) 4, 1134, 1737, 1829, 2458, 2633, 3365
Eco52I CGGCCG 1 cut(s) 33
Eco57I CTGAAG 6 cut(s) 983, 1191, 1417, 1572, 2970, 3468
Eco91I GGTNACC 1 cut(s) 2312
EcoNI CCTNNNNNAGG 1 cut(s) 1889
EcoO109I RGGNCCY 4 cut(s) 1375, 2585, 2956, 3511
EcoO65I GGTNACC 1 cut(s) 2312
EcoRI GAATTC 1 cut(s) 790
EcoRII CCWGG 7 cut(s) 168, 276, 641, 2055, 2169, 2316, 2331
EcoT14I CCWWGG 4 cut(s) 250, 1142, 2235, 2854
EcoT22I ATGCAT 1 cut(s) 3125
EcoT38I GRGCYC 3 cut(s) 1379, 2181, 2589
ErhI CCWWGG 4 cut(s) 250, 1142, 2235, 2854
Esp3I CGTCTC 3 cut(s) 57, 859, 1686
FaeI CATG 9 cut(s) 1258, 1497, 1619, 2048, 2239, 2771, 3103, 3491, 3498
FalI AAGNNNNNCTT 2 cut(s) 1135, 1167
FaqI GGGAC 1 cut(s) 2471
FatI CATG 9 cut(s) 1254, 1493, 1615, 2044, 2235, 2767, 3099, 3487, 3494
FauI CCCGC 1 cut(s) 77
FbaI TGATCA 2 cut(s) 1096, 2490
FokI GGATG 9 cut(s) 278, 353, 829, 1520, 2159, 2234, 2671, 3095, 3280
FriOI GRGCYC 3 cut(s) 1379, 2181, 2589
FspBI CTAG 8 cut(s) 843, 1445, 1842, 2345, 2435, 2454, 2513, 2844
GlaI GCGC 4 cut(s) 326, 554, 583, 1249
GsaI CCCAGC 2 cut(s) 1701, 3294
GsuI CTGGAG 2 cut(s) 260, 2399
HgaI GACGC 2 cut(s) 931, 1703
HhaI GCGC 4 cut(s) 327, 555, 584, 1250
Hin1II CATG 9 cut(s) 1258, 1497, 1619, 2048, 2239, 2771, 3103, 3491, 3498
Hin6I GCGC 4 cut(s) 325, 553, 582, 1248
HinP1I GCGC 4 cut(s) 325, 553, 582, 1248
HincII GTYRAC 2 cut(s) 1384, 1929
HindII GTYRAC 2 cut(s) 1384, 1929
HindIII AAGCTT 4 cut(s) 143, 401, 909, 2806
Hpy166II GTNNAC 7 cut(s) 1384, 1929, 2167, 3226, 3365, 3505, 3556
Hpy8I GTNNAC 7 cut(s) 1384, 1929, 2167, 3226, 3365, 3505, 3556
Hpy99I CGWCG 1 cut(s) 52
HpyCH4III ACNGT 9 cut(s) 124, 870, 1057, 1388, 1737, 2205, 2671, 3152, 3431
HpyCH4IV ACGT 6 cut(s) 424, 647, 688, 893, 2536, 2554
HpyF10VI GCNNNNNNNGC 6 cut(s) 961, 1322, 2645, 3005, 3344, 3392
HpySE526I ACGT 6 cut(s) 424, 647, 688, 893, 2536, 2554
Hsp92II CATG 9 cut(s) 1258, 1497, 1619, 2048, 2239, 2771, 3103, 3491, 3498
HspAI GCGC 4 cut(s) 325, 553, 582, 1248
KroI GCCGGC 1 cut(s) 3054
KroNI GCCGGC 1 cut(s) 3056
Ksp22I TGATCA 2 cut(s) 1096, 2490
LguI GCTCTTC 1 cut(s) 2169
LweI GCATC 8 cut(s) 256, 807, 1264, 1498, 2635, 3110, 3117, 3151
MaeI CTAG 8 cut(s) 843, 1445, 1842, 2345, 2435, 2454, 2513, 2844
MaeII ACGT 6 cut(s) 424, 647, 688, 893, 2536, 2554
MaeIII GTNAC 5 cut(s) 1265, 2008, 2312, 2359, 2665
MbiI CCGCTC 2 cut(s) 3130, 3347
MfeI CAATTG 1 cut(s) 2274
MflI RGATCY 4 cut(s) 1436, 1988, 2340, 3295
MhlI GDGCHC 5 cut(s) 319, 1379, 1472, 2181, 2589
MlsI TGGCCA 2 cut(s) 1316, 2408
MluNI TGGCCA 2 cut(s) 1316, 2408
MlyI GAGTC 6 cut(s) 106, 144, 1273, 1409, 1934, 3581
MmeI TCCRAC 8 cut(s) 318, 788, 842, 1500, 2187, 2490, 3352, 3388
Mox20I TGGCCA 2 cut(s) 1316, 2408
Mph1103I ATGCAT 1 cut(s) 3125
MroNI GCCGGC 1 cut(s) 3054
MroXI GAANNNNTTC 3 cut(s) 1905, 1955, 2138
MscI TGGCCA 2 cut(s) 1316, 2408
MslI CAYNNNNRTG 6 cut(s) 687, 1272, 1686, 2486, 2689, 3098
Msp20I TGGCCA 2 cut(s) 1316, 2408
MspA1I CMGCKG 4 cut(s) 587, 1826, 3416, 3531
MspCI CTTAAG 1 cut(s) 1684
MunI CAATTG 1 cut(s) 2274
Mva1269I GAATGC 3 cut(s) 456, 2879, 3042
MvaI CCWGG 7 cut(s) 170, 278, 643, 2057, 2171, 2318, 2333
MvnI CGCG 2 cut(s) 555, 582
MwoI GCNNNNNNNGC 6 cut(s) 961, 1322, 2645, 3005, 3344, 3392
NaeI GCCGGC 1 cut(s) 3056
NciI CCSGG 5 cut(s) 9, 32, 202, 1379, 3265
NcoI CCATGG 1 cut(s) 2235
NgoMIV GCCGGC 1 cut(s) 3054
NlaIII CATG 9 cut(s) 1258, 1497, 1619, 2048, 2239, 2771, 3103, 3491, 3498
NmeAIII GCCGAG 1 cut(s) 2889
NmuCI GTSAC 4 cut(s) 1265, 2008, 2359, 2665
NsiI ATGCAT 1 cut(s) 3125
NspI RCATGY 1 cut(s) 3498
OliI CACNNNNGTG 2 cut(s) 687, 1686
PaeI GCATGC 1 cut(s) 3498
PagI TCATGA 2 cut(s) 1615, 2767
PciSI GCTCTTC 1 cut(s) 2169
PcsI WCGNNNNNNNCGW 1 cut(s) 1876
PctI GAATGC 3 cut(s) 456, 2879, 3042
PdiI GCCGGC 1 cut(s) 3056
PdmI GAANNNNTTC 3 cut(s) 1905, 1955, 2138
PfeI GAWTC 8 cut(s) 983, 1033, 1406, 1567, 1901, 2159, 2521, 3185
PflMI CCANNNNNTGG 1 cut(s) 1519
PinAI ACCGGT 1 cut(s) 729
PleI GAGTC 6 cut(s) 106, 144, 1272, 1408, 1933, 3580
PpsI GAGTC 6 cut(s) 106, 144, 1272, 1408, 1933, 3580
Ppu21I YACGTR 1 cut(s) 2555
Psp6I CCWGG 7 cut(s) 168, 276, 641, 2055, 2169, 2316, 2331
PspEI GGTNACC 1 cut(s) 2312
PspFI CCCAGC 2 cut(s) 1697, 3290
PspGI CCWGG 7 cut(s) 168, 276, 641, 2055, 2169, 2316, 2331
PspOMI GGGCCC 2 cut(s) 1375, 2585
PstI CTGCAG 1 cut(s) 1327
PstNI CAGNNNCTG 1 cut(s) 590
PsuI RGATCY 4 cut(s) 1436, 1988, 2340, 3295
PvuII CAGCTG 2 cut(s) 587, 1826
RsaI GTAC 5 cut(s) 545, 609, 2603, 2865, 3506
RsaNI GTAC 5 cut(s) 544, 608, 2602, 2864, 3505
RseI CAYNNNNRTG 6 cut(s) 687, 1272, 1686, 2486, 2689, 3098
SapI GCTCTTC 1 cut(s) 2169
SchI GAGTC 6 cut(s) 106, 144, 1273, 1409, 1934, 3581
SduI GDGCHC 5 cut(s) 319, 1379, 1472, 2181, 2589
SfaNI GCATC 8 cut(s) 256, 807, 1264, 1498, 2635, 3110, 3117, 3151
SfcI CTRYAG 2 cut(s) 1056, 1323
SinI GGWCC 7 cut(s) 4, 1134, 1737, 1829, 2458, 2633, 3365
SmiMI CAYNNNNRTG 6 cut(s) 687, 1272, 1686, 2486, 2689, 3098
SmlI CTYRAG 8 cut(s) 237, 461, 767, 881, 929, 1028, 1477, 1684
SmoI CTYRAG 8 cut(s) 237, 461, 767, 881, 929, 1028, 1477, 1684
SphI GCATGC 1 cut(s) 3498
SsiI CCGC 9 cut(s) 70, 166, 349, 437, 1277, 3130, 3347, 3416, 3531
SspI AATATT 1 cut(s) 2071
SspMI CTAG 8 cut(s) 843, 1445, 1842, 2345, 2435, 2454, 2513, 2844
StyI CCWWGG 4 cut(s) 250, 1142, 2235, 2854
TaaI ACNGT 9 cut(s) 124, 870, 1057, 1388, 1737, 2205, 2671, 3152, 3431
TaiI ACGT 6 cut(s) 427, 650, 691, 896, 2539, 2557
TaqI TCGA 9 cut(s) 90, 126, 148, 226, 960, 1024, 1049, 1943, 2738
TaqII GACCGA 1 cut(s) 3231
TatI WGTACW 3 cut(s) 543, 2863, 3504
TauI GCSGC 4 cut(s) 168, 352, 3133, 3534
TfiI GAWTC 8 cut(s) 983, 1033, 1406, 1567, 1901, 2159, 2521, 3185
TseFI GTSAC 4 cut(s) 1265, 2008, 2359, 2665
Tsp45I GTSAC 4 cut(s) 1265, 2008, 2359, 2665
TspGWI ACGGA 4 cut(s) 97, 1065, 2677, 3541
Van91I CCANNNNNTGG 1 cut(s) 1519
Vha464I CTTAAG 1 cut(s) 1684
VpaK11BI GGWCC 7 cut(s) 4, 1134, 1737, 1829, 2458, 2633, 3365
XagI CCTNNNNNAGG 1 cut(s) 1889
XapI RAATTY 5 cut(s) 790, 1331, 2226, 2824, 3012
XbaI TCTAGA 3 cut(s) 842, 2512, 2843
XceI RCATGY 1 cut(s) 3498
XmnI GAANNNNTTC 3 cut(s) 1905, 1955, 2138
XspI CTAG 8 cut(s) 843, 1445, 1842, 2345, 2435, 2454, 2513, 2844
Zsp2I ATGCAT 1 cut(s) 3125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.