Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003838.1

Orthogroup ID

OG0005785

Physical Location & Seq

Genomic Coordinates Forward (+)

29278 .. 33159

Gene Structure 3882 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003838.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2724 bp

atgcgcttagctaagttggatgagttgcggcaagcagctaaaagtggcgtagaaatgcgttttgagaaggaacgacagaagcttggttcaaaagttgaattacgttttcagcaggcggaggcaaatagaatgcttatgctcaaggcttatagacagagaagggccaacttgaaggagaggtcatctcagtccttgttgcgaaagatggctcgggagaataagtacaaggagcgcgtgcgtgctgcaattaaccaaaaacgcgcagctgctgagaaaaagcgactggtacttttggaagaagagaagaagagggcatacgccaggacgttgcaagtgcaaagagtagcaaagtctgtctctcaccaacgtgagattgaaaggagagcgaaaagggatcagttagaagaccggttgcagagggcaaagagacaaagagcagaatatctcaagcaaagaggaaagatacagaattcatttcaagtcagttggaataggatgcacaaacaggctgatttcctgtctagaaagttagcaaggtgttggagacggttccacaggctcaagagaactacgtttgctttggcaaaagcttacaataccttgaaacttgaggaaaacagcgtcaagtcaatgccgttcgagcagcttgcaattctgattgaatcacctgatacccttcagactgggaaggctctacttgatcgacttgagaatcggttgaaagtctcgaagactgtagcctctataaactatccgtccagtattgataacattgatcaccttctcaaacgagttgcttctcccaaaaggaggaccacaccaaggacatctttgagaagcagggagggaaagaaagcctcttctgtcagggccacaaccagaacttcagctaaattaacaaggtatcaagtgagagtggttctttgcgcttacatgattttgagtcacccagatgcggttttcaatggtcaaggagagcgtgagacttctctggccaaatctgcagaagaatttgttagagagtttgagttgttggtgaagactatattacagggcccggtcaacagttctgaggaagagtctgattccacatcgcccaaacgcttaaccttcagatctcagctaggagcttttgataaagcgtggtgctcctacttgagttgctttgtggcatggaaggttaaggatgcccagttgttggagggagatttagtgagggcagcttgccagatggagctgtctatgattcaaacttgcaagatgacttcagaaggacatactgccgatctcactcatgatatgaaggctattcagaaacaggtcgcagaagaccaaaagctactgagagaaaaggtgcaacacttaagtggagacgctgggattgagcgtatgacatctgctttatctgaaacacggtccaagtattttgcagcaagggaaaatggaagtccatcagggttgcaaaccactcagtttgtttctccaagccctccaagttcatcagctggtccttctgtttctagcttagataagaagagaaatccaagtcgtgtagttcgttccctatttcaggaagatgaatctattcgtccgaaaggattagagtcaactgagattggatcgattgtgaatgagttctctaagaccaatttgagtgggcagctcggatcttcttcccaaaagccggtcactgagaatgaactgattgtgaatgagtttctccatgagcaaaaccaggcttttgctaatattttcaatgctgccgatgaagatcaaaataatgtccagtcaaagatcagaaacactatggagaaggctttctgggatggcataatggaatctgtaaaccaggaagagcccaactatgaccggatcattcaactgttggaggaggtgagggatgaaatttgcaccatggctccacagagctggaaacaagaaattgttgaagcaattgatgtggatattctctctcaggtgctaaaatctggtaacctggatattgattacctgggaaagatcctagagttttcaatggtcactttgcgaaagctctctgctcctgcgaatgatgatgaaatgatggccactctccagagtttaaggaaagaactagatgagatatgtaatgctagggaccagtccaactgctcaggtgtcattgctatgatcaagggtctgcgttttgttctagagcagattcaggtgcttaaacgtgagattagcaaagcacgtataagaataatggagcctttgttgaaggggcccactggtttgcagtaccttacaaatgcctttgccaatcgctatggacctgcctcagatgccaatacctctctaccagtgacggtgcagtggctttcatccgtgtggaattgcaaagatcaggagtggcaagaacataagattgcttcctcgactttgatgagcagtgataatttgtctcatgagtttcttccttccaccacccttagaagtggtggaagctttctgttgaaatcaaattcttcatcgctgtcttctagaaatagccaaggtaatgtacaaccggaatgcaagggagaaggagttgatttgttggtgaggctcggcttgttgaagttggtgagtggtgtttctggtctgactgaagaggccctgcctgaaacttttatgcttaacctttcaagattaagggctgtgcaggctcaaattcagaaaattattgtttcttccataaggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Tcp11

Protein Analysis

907

Amino Acids

102.88

Weight (kDa)

9.64

Isoelectric Point (pI)

53.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005785)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22930 AT1G22930
fragaria_vesca	FvH4_5g28950 FvH4_5g28950 FvH4_5g28950 FvH4_5g28950
malus_domestica	MD08G1236100.v1.1 MD15G1428100.v1.1
prunus_persica	Prupe.1G572800_v2.0.a1 Prupe.1G572800_v2.0.a1
pyrus_communis	pycom08g20440 pycom08g20450 pycom15g37930
rosa_chinensis	RchiOBHm_Chr7g0221251
rosa_laevigata	RLG00000002166
rosa_multiflora	Rmu_sc0000324.1_g000018 Rmu_sc0003838.1_g000004 Rmu_sc0029316.1_g000001 Rmu_sc0032411.1_g000003
rosa_roxburghii	Rroxscaffold_3G00238480 Rroxscaffold_3G00238510
rosa_rugosa	Rorug07G0201800 Rorug07G0201900
rosa_samantha	Rh7AG340700 Rh7BG332000 Rh7CG358600 Rh7DG339500
rosa_wichuraiana	Rw7G029000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2323
AccB7I	CCANNNNNTGG	1 cut(s)	1198
AccII	CGCG	2 cut(s)	234, 261
AciI	CCGC	3 cut(s)	28, 116, 956
AclWI	GGATC	5 cut(s)	402, 1627, 1675, 1880, 2014
AcoI	YGGCCR	2 cut(s)	993, 2085
AcsI	RAATTY	5 cut(s)	469, 1010, 1905, 2503, 2691
AcuI	CTGAAG	5 cut(s)	662, 870, 1096, 1251, 2649
AfaI	GTAC	4 cut(s)	224, 288, 2282, 2544
AfiI	CCNNNNNNNGG	6 cut(s)	810, 822, 955, 1198, 1570, 1684
AflII	CTTAAG	1 cut(s)	1363
AgeI	ACCGGT	1 cut(s)	408
AjnI	CCWGG	5 cut(s)	320, 1734, 1848, 1995, 2010
AleI	CACNNNNGTG	2 cut(s)	366, 1365
Alw21I	GWGCWC	1 cut(s)	1151
Alw26I	GTCTC	7 cut(s)	361, 421, 538, 730, 977, 1365, 2448
AlwI	GGATC	5 cut(s)	402, 1627, 1675, 1880, 2014
AlwNI	CAGNNNCTG	1 cut(s)	269
Ama87I	CYCGRG	1 cut(s)	210
AoxI	GGCC	7 cut(s)	162, 870, 993, 1054, 2085, 2264, 2634
ApaI	GGGCCC	2 cut(s)	1058, 2268
ApeKI	GCWGC	9 cut(s)	35, 242, 263, 266, 643, 1220, 1430, 1660, 1760
ApoI	RAATTY	5 cut(s)	469, 1010, 1905, 2503, 2691
AsiGI	ACCGGT	1 cut(s)	408
Asp700I	GAANNNNTTC	3 cut(s)	1584, 1634, 1817
AspLEI	GCGC	4 cut(s)	6, 234, 263, 929
AsuC2I	CCSGG	1 cut(s)	1058
AsuHPI	GGTGA	8 cut(s)	353, 657, 770, 938, 1048, 1906, 2593, 2617
AvaI	CYCGRG	1 cut(s)	210
AvaII	GGWCC	5 cut(s)	813, 1416, 1508, 2137, 2312
BaeGI	GKGCMC	2 cut(s)	1058, 2268
BalI	TGGCCA	2 cut(s)	995, 2087
BanII	GRGCYC	3 cut(s)	1058, 1860, 2268
BarI	GAAGNNNNNNTAC	2 cut(s)	299, 331
BbsI	GAAGAC	5 cut(s)	411, 737, 1046, 1335, 2511
Bbv12I	GWGCWC	1 cut(s)	1151
BbvI	GCAGC	9 cut(s)	47, 229, 253, 275, 655, 1232, 1442, 1672, 1747
BccI	CCATC	5 cut(s)	199, 1225, 1459, 1820, 2077
BceAI	ACGGC	1 cut(s)	619
BcgI	CGANNNNNNTGC	2 cut(s)	629, 663
BciT130I	CCWGG	5 cut(s)	322, 1736, 1850, 1997, 2012
BclI	TGATCA	2 cut(s)	775, 2169
BcnI	CCSGG	1 cut(s)	1058
BcoDI	GTCTC	7 cut(s)	361, 421, 538, 730, 977, 1365, 2448
BfaI	CTAG	8 cut(s)	522, 1124, 1521, 2024, 2114, 2133, 2192, 2523
BfmI	CTRYAG	2 cut(s)	735, 1002
BfrI	CTTAAG	1 cut(s)	1363
BfuAI	ACCTGC	1 cut(s)	2323
BglII	AGATCT	1 cut(s)	1115
BlpI	GCTNAGC	1 cut(s)	7
Bme1390I	CCNGG	6 cut(s)	322, 1058, 1736, 1850, 1997, 2012
Bme18I	GGWCC	5 cut(s)	813, 1416, 1508, 2137, 2312
BmeT110I	CYCGRG	1 cut(s)	210
BmiI	GGNNCC	7 cut(s)	551, 1056, 1920, 2138, 2250, 2265, 2266
BmrFI	CCNGG	6 cut(s)	322, 1058, 1736, 1850, 1997, 2012
BmrI	ACTGGG	2 cut(s)	693, 1186
BmsI	GCATC	4 cut(s)	486, 943, 1177, 2314
BmuI	ACTGGG	2 cut(s)	693, 1186
BpiI	GAAGAC	5 cut(s)	411, 737, 1046, 1335, 2511
BplI	GAGNNNNNCTC	2 cut(s)	169, 201
BpmI	CTGGAG	1 cut(s)	2078
Bpu10I	CCTNAGC	1 cut(s)	2152
Bpu1102I	GCTNAGC	1 cut(s)	7
BpuEI	CTTGAG	6 cut(s)	125, 431, 545, 629, 728, 1177
BpuMI	CCSGG	1 cut(s)	1058
Bsa29I	ATCGAT	1 cut(s)	1622
BsaAI	YACGTR	1 cut(s)	2234
BsaBI	GATNNNNATC	1 cut(s)	1770
BsaJI	CCNNGG	4 cut(s)	821, 1914, 2011, 2533
BsaWI	WCCGGW	3 cut(s)	408, 1869, 2548
Bsc4I	CCNNNNNNNGG	6 cut(s)	810, 822, 955, 1198, 1570, 1684
Bse118I	RCCGGY	2 cut(s)	408, 1684
Bse1I	ACTGG	8 cut(s)	288, 688, 759, 1192, 1786, 2140, 2275, 2342
Bse3DI	GCAATG	1 cut(s)	2160
Bse8I	GATNNNNATC	1 cut(s)	1770
BseBI	CCWGG	5 cut(s)	322, 1736, 1850, 1997, 2012
BseCI	ATCGAT	1 cut(s)	1622
BseDI	CCNNGG	4 cut(s)	821, 1914, 2011, 2533
BseGI	GGATG	6 cut(s)	25, 501, 1192, 1831, 1906, 2363
BseJI	GATNNNNATC	1 cut(s)	1770
BseLI	CCNNNNNNNGG	6 cut(s)	810, 822, 955, 1198, 1570, 1684
BseMI	GCAATG	1 cut(s)	2160
BseNI	ACTGG	8 cut(s)	288, 688, 759, 1192, 1786, 2140, 2275, 2342
BseRI	GAGGAG	1 cut(s)	1904
BseSI	GKGCMC	2 cut(s)	1058, 2268
BseXI	GCAGC	9 cut(s)	47, 229, 253, 275, 655, 1232, 1442, 1672, 1747
BseYI	CCCAGC	1 cut(s)	1376
BsgI	GTGCAG	2 cut(s)	2372, 2702
Bsh1236I	CGCG	2 cut(s)	234, 261
BshFI	GGCC	7 cut(s)	164, 872, 995, 1056, 2087, 2266, 2636
BshTI	ACCGGT	1 cut(s)	408
BshVI	ATCGAT	1 cut(s)	1622
BsiHKAI	GWGCWC	1 cut(s)	1151
BsiHKCI	CYCGRG	1 cut(s)	210
BsiSI	CCGG	5 cut(s)	409, 1058, 1685, 1870, 2549
BslFI	GGGAC	1 cut(s)	2150
BslI	CCNNNNNNNGG	6 cut(s)	810, 822, 955, 1198, 1570, 1684
BsmAI	GTCTC	7 cut(s)	361, 421, 538, 730, 977, 1365, 2448
BsmBI	CGTCTC	2 cut(s)	538, 1365
BsmFI	GGGAC	1 cut(s)	2150
BsmI	GAATGC	2 cut(s)	135, 2558
BsnI	GGCC	7 cut(s)	164, 872, 995, 1056, 2087, 2266, 2636
BsoBI	CYCGRG	1 cut(s)	210
Bsp120I	GGGCCC	2 cut(s)	1054, 2264
Bsp1286I	GDGCHC	4 cut(s)	1058, 1151, 1860, 2268
Bsp1407I	TGTACA	1 cut(s)	2542
Bsp1720I	GCTNAGC	1 cut(s)	7
Bsp19I	CCATGG	1 cut(s)	1914
BspACI	CCGC	3 cut(s)	28, 116, 956
BspANI	GGCC	7 cut(s)	164, 872, 995, 1056, 2087, 2266, 2636
BspDI	ATCGAT	1 cut(s)	1622
BspFNI	CGCG	2 cut(s)	234, 261
BspHI	TCATGA	2 cut(s)	1294, 2446
BspLI	GGNNCC	7 cut(s)	551, 1056, 1920, 2138, 2250, 2265, 2266
BspMAI	CTGCAG	1 cut(s)	1006
BspMI	ACCTGC	1 cut(s)	2323
BspPI	GGATC	5 cut(s)	402, 1627, 1675, 1880, 2014
BspQI	GCTCTTC	1 cut(s)	1848
BspTI	CTTAAG	1 cut(s)	1363
BsrDI	GCAATG	1 cut(s)	2160
BsrFI	RCCGGY	2 cut(s)	408, 1684
BsrGI	TGTACA	1 cut(s)	2542
BsrI	ACTGG	8 cut(s)	288, 688, 759, 1192, 1786, 2140, 2275, 2342
BssAI	RCCGGY	2 cut(s)	408, 1684
BssECI	CCNNGG	4 cut(s)	821, 1914, 2011, 2533
BssT1I	CCWWGG	3 cut(s)	821, 1914, 2533
Bst2UI	CCWGG	5 cut(s)	322, 1736, 1850, 1997, 2012
Bst4CI	ACNGT	6 cut(s)	549, 736, 1067, 1416, 1884, 2350
Bst6I	CTCTTC	7 cut(s)	294, 302, 865, 1071, 1529, 1848, 2625
BstAFI	CTTAAG	1 cut(s)	1363
BstAUI	TGTACA	1 cut(s)	2542
BstBAI	YACGTR	1 cut(s)	2234
BstC8I	GCNNGC	7 cut(s)	33, 114, 236, 240, 648, 1225, 2685
BstDSI	CCRYGG	1 cut(s)	1914
BstEII	GGTNACC	1 cut(s)	1991
BstENI	CCTNNNNNAGG	1 cut(s)	1568
BstF5I	GGATG	6 cut(s)	25, 501, 1192, 1831, 1906, 2363
BstFNI	CGCG	2 cut(s)	234, 261
BstHHI	GCGC	4 cut(s)	6, 234, 263, 929
BstMAI	GTCTC	7 cut(s)	361, 421, 538, 730, 977, 1365, 2448
BstMWI	GCNNNNNNNGC	4 cut(s)	640, 1001, 2324, 2684
BstNI	CCWGG	5 cut(s)	322, 1736, 1850, 1997, 2012
BstPI	GGTNACC	1 cut(s)	1991
BstSCI	CCNGG	6 cut(s)	320, 1056, 1734, 1848, 1995, 2010
BstSFI	CTRYAG	2 cut(s)	735, 1002
BstSLI	GKGCMC	2 cut(s)	1058, 2268
BstUI	CGCG	2 cut(s)	234, 261
BstV1I	GCAGC	9 cut(s)	47, 229, 253, 275, 655, 1232, 1442, 1672, 1747
BstV2I	GAAGAC	5 cut(s)	411, 737, 1046, 1335, 2511
BstX2I	RGATCY	3 cut(s)	1115, 1667, 2019
BstXI	CCANNNNNNTGG	1 cut(s)	1929
BstYI	RGATCY	3 cut(s)	1115, 1667, 2019
Bsu15I	ATCGAT	1 cut(s)	1622
BsuRI	GGCC	7 cut(s)	164, 872, 995, 1056, 2087, 2266, 2636
BsuTUI	ATCGAT	1 cut(s)	1622
BtgI	CCRYGG	1 cut(s)	1914
BtgZI	GCGATG	2 cut(s)	1077, 2496
BtsCI	GGATG	6 cut(s)	25, 501, 1192, 1831, 1906, 2363
BtsI	GCAGTG	2 cut(s)	2360, 2437
BtsIMutI	CAGTG	5 cut(s)	1689, 2268, 2349, 2360, 2437
BveI	ACCTGC	1 cut(s)	2323
Cac8I	GCNNGC	7 cut(s)	33, 114, 236, 240, 648, 1225, 2685
CaiI	CAGNNNCTG	1 cut(s)	269
CciI	TCATGA	2 cut(s)	1294, 2446
CfoI	GCGC	4 cut(s)	6, 234, 263, 929
Cfr10I	RCCGGY	2 cut(s)	408, 1684
ClaI	ATCGAT	1 cut(s)	1622
CseI	GACGC	2 cut(s)	610, 1382
Csp6I	GTAC	4 cut(s)	223, 287, 2281, 2543
CspAI	ACCGGT	1 cut(s)	408
CspCI	CAANNNNNGTGG	6 cut(s)	1456, 1491, 1636, 1671, 1941, 1976
CviAII	CATG	6 cut(s)	934, 1173, 1295, 1724, 1915, 2447
CviQI	GTAC	4 cut(s)	223, 287, 2281, 2543
EaeI	YGGCCR	2 cut(s)	993, 2085
Eam1104I	CTCTTC	7 cut(s)	294, 302, 865, 1071, 1529, 1848, 2625
EarI	CTCTTC	7 cut(s)	294, 302, 865, 1071, 1529, 1848, 2625
EciI	GGCGGA	1 cut(s)	131
Eco130I	CCWWGG	3 cut(s)	821, 1914, 2533
Eco24I	GRGCYC	3 cut(s)	1058, 1860, 2268
Eco47I	GGWCC	5 cut(s)	813, 1416, 1508, 2137, 2312
Eco57I	CTGAAG	5 cut(s)	662, 870, 1096, 1251, 2649
Eco88I	CYCGRG	1 cut(s)	210
Eco91I	GGTNACC	1 cut(s)	1991
EcoNI	CCTNNNNNAGG	1 cut(s)	1568
EcoO109I	RGGNCCY	3 cut(s)	1054, 2264, 2635
EcoO65I	GGTNACC	1 cut(s)	1991
EcoRI	GAATTC	1 cut(s)	469
EcoRII	CCWGG	5 cut(s)	320, 1734, 1848, 1995, 2010
EcoT14I	CCWWGG	3 cut(s)	821, 1914, 2533
EcoT38I	GRGCYC	3 cut(s)	1058, 1860, 2268
ErhI	CCWWGG	3 cut(s)	821, 1914, 2533
Esp3I	CGTCTC	2 cut(s)	538, 1365
FaeI	CATG	6 cut(s)	937, 1176, 1298, 1727, 1918, 2450
FalI	AAGNNNNNCTT	2 cut(s)	814, 846
FaqI	GGGAC	1 cut(s)	2150
FatI	CATG	6 cut(s)	933, 1172, 1294, 1723, 1914, 2446
FbaI	TGATCA	2 cut(s)	775, 2169
FokI	GGATG	6 cut(s)	32, 508, 1199, 1838, 1913, 2350
FriOI	GRGCYC	3 cut(s)	1058, 1860, 2268
FspBI	CTAG	8 cut(s)	522, 1124, 1521, 2024, 2114, 2133, 2192, 2523
GlaI	GCGC	4 cut(s)	5, 233, 262, 928
GsaI	CCCAGC	1 cut(s)	1380
GsuI	CTGGAG	1 cut(s)	2078
HaeIII	GGCC	7 cut(s)	164, 872, 995, 1056, 2087, 2266, 2636
HapII	CCGG	5 cut(s)	409, 1058, 1685, 1870, 2549
HgaI	GACGC	2 cut(s)	610, 1382
HhaI	GCGC	4 cut(s)	6, 234, 263, 929
Hin1II	CATG	6 cut(s)	937, 1176, 1298, 1727, 1918, 2450
Hin6I	GCGC	4 cut(s)	4, 232, 261, 927
HinP1I	GCGC	4 cut(s)	4, 232, 261, 927
HincII	GTYRAC	2 cut(s)	1063, 1608
HindII	GTYRAC	2 cut(s)	1063, 1608
HindIII	AAGCTT	3 cut(s)	80, 588, 2485
HpaII	CCGG	5 cut(s)	409, 1058, 1685, 1870, 2549
HphI	GGTGA	8 cut(s)	353, 657, 770, 938, 1048, 1906, 2593, 2617
Hpy166II	GTNNAC	3 cut(s)	1063, 1608, 1846
Hpy8I	GTNNAC	3 cut(s)	1063, 1608, 1846
HpyCH4III	ACNGT	6 cut(s)	549, 736, 1067, 1416, 1884, 2350
HpyCH4IV	ACGT	6 cut(s)	103, 326, 367, 572, 2215, 2233
HpyF10VI	GCNNNNNNNGC	4 cut(s)	640, 1001, 2324, 2684
HpySE526I	ACGT	6 cut(s)	103, 326, 367, 572, 2215, 2233
Hsp92II	CATG	6 cut(s)	937, 1176, 1298, 1727, 1918, 2450
HspAI	GCGC	4 cut(s)	4, 232, 261, 927
Ksp22I	TGATCA	2 cut(s)	775, 2169
LguI	GCTCTTC	1 cut(s)	1848
LmnI	GCTCC	7 cut(s)	229, 1127, 1154, 1234, 1924, 2065, 2248
Lsp1109I	GCAGC	9 cut(s)	47, 229, 253, 275, 655, 1232, 1442, 1672, 1747
LweI	GCATC	4 cut(s)	486, 943, 1177, 2314
MaeI	CTAG	8 cut(s)	522, 1124, 1521, 2024, 2114, 2133, 2192, 2523
MaeII	ACGT	6 cut(s)	103, 326, 367, 572, 2215, 2233
MaeIII	GTNAC	5 cut(s)	944, 1687, 1991, 2038, 2344
MfeI	CAATTG	1 cut(s)	1953
MflI	RGATCY	3 cut(s)	1115, 1667, 2019
MhlI	GDGCHC	4 cut(s)	1058, 1151, 1860, 2268
MlsI	TGGCCA	2 cut(s)	995, 2087
MluNI	TGGCCA	2 cut(s)	995, 2087
MlyI	GAGTC	3 cut(s)	952, 1088, 1613
MmeI	TCCRAC	5 cut(s)	467, 521, 1179, 1866, 2169
Mox20I	TGGCCA	2 cut(s)	995, 2087
MroXI	GAANNNNTTC	3 cut(s)	1584, 1634, 1817
MscI	TGGCCA	2 cut(s)	995, 2087
MseI	TTAA	9 cut(s)	249, 896, 1106, 1182, 1364, 2102, 2211, 2658, 2672
MslI	CAYNNNNRTG	5 cut(s)	366, 951, 1365, 2165, 2368
Msp20I	TGGCCA	2 cut(s)	995, 2087
MspA1I	CMGCKG	2 cut(s)	266, 1505
MspCI	CTTAAG	1 cut(s)	1363
MspI	CCGG	5 cut(s)	409, 1058, 1685, 1870, 2549
MspR9I	CCNGG	6 cut(s)	322, 1058, 1736, 1850, 1997, 2012
MunI	CAATTG	1 cut(s)	1953
Mva1269I	GAATGC	2 cut(s)	135, 2558
MvaI	CCWGG	5 cut(s)	322, 1736, 1850, 1997, 2012
MvnI	CGCG	2 cut(s)	234, 261
MwoI	GCNNNNNNNGC	4 cut(s)	640, 1001, 2324, 2684
NciI	CCSGG	1 cut(s)	1058
NcoI	CCATGG	1 cut(s)	1914
NlaIII	CATG	6 cut(s)	937, 1176, 1298, 1727, 1918, 2450
NlaIV	GGNNCC	7 cut(s)	551, 1056, 1920, 2138, 2250, 2265, 2266
NmeAIII	GCCGAG	1 cut(s)	2568
NmuCI	GTSAC	4 cut(s)	944, 1687, 2038, 2344
OliI	CACNNNNGTG	2 cut(s)	366, 1365
PagI	TCATGA	2 cut(s)	1294, 2446
PciSI	GCTCTTC	1 cut(s)	1848
PcsI	WCGNNNNNNNCGW	1 cut(s)	1555
PctI	GAATGC	2 cut(s)	135, 2558
PdmI	GAANNNNTTC	3 cut(s)	1584, 1634, 1817
PfeI	GAWTC	7 cut(s)	662, 712, 1085, 1246, 1580, 1838, 2200
PflMI	CCANNNNNTGG	1 cut(s)	1198
PinAI	ACCGGT	1 cut(s)	408
PleI	GAGTC	3 cut(s)	951, 1087, 1612
PpsI	GAGTC	3 cut(s)	951, 1087, 1612
Ppu21I	YACGTR	1 cut(s)	2234
Psp6I	CCWGG	5 cut(s)	320, 1734, 1848, 1995, 2010
PspEI	GGTNACC	1 cut(s)	1991
PspFI	CCCAGC	1 cut(s)	1376
PspGI	CCWGG	5 cut(s)	320, 1734, 1848, 1995, 2010
PspN4I	GGNNCC	7 cut(s)	551, 1056, 1920, 2138, 2250, 2265, 2266
PspOMI	GGGCCC	2 cut(s)	1054, 2264
PstI	CTGCAG	1 cut(s)	1006
PstNI	CAGNNNCTG	1 cut(s)	269
PsuI	RGATCY	3 cut(s)	1115, 1667, 2019
PvuII	CAGCTG	2 cut(s)	266, 1505
RsaI	GTAC	4 cut(s)	224, 288, 2282, 2544
RsaNI	GTAC	4 cut(s)	223, 287, 2281, 2543
RseI	CAYNNNNRTG	5 cut(s)	366, 951, 1365, 2165, 2368
SapI	GCTCTTC	1 cut(s)	1848
SaqAI	TTAA	9 cut(s)	249, 896, 1106, 1182, 1364, 2102, 2211, 2658, 2672
SchI	GAGTC	3 cut(s)	952, 1088, 1613
ScrFI	CCNGG	6 cut(s)	322, 1058, 1736, 1850, 1997, 2012
SduI	GDGCHC	4 cut(s)	1058, 1151, 1860, 2268
SfaNI	GCATC	4 cut(s)	486, 943, 1177, 2314
SfcI	CTRYAG	2 cut(s)	735, 1002
SinI	GGWCC	5 cut(s)	813, 1416, 1508, 2137, 2312
SmiMI	CAYNNNNRTG	5 cut(s)	366, 951, 1365, 2165, 2368
SmlI	CTYRAG	7 cut(s)	140, 446, 560, 608, 707, 1156, 1363
SmoI	CTYRAG	7 cut(s)	140, 446, 560, 608, 707, 1156, 1363
SsiI	CCGC	3 cut(s)	28, 116, 956
SspI	AATATT	1 cut(s)	1750
SspMI	CTAG	8 cut(s)	522, 1124, 1521, 2024, 2114, 2133, 2192, 2523
StyD4I	CCNGG	6 cut(s)	320, 1056, 1734, 1848, 1995, 2010
StyI	CCWWGG	3 cut(s)	821, 1914, 2533
TaaI	ACNGT	6 cut(s)	549, 736, 1067, 1416, 1884, 2350
TaiI	ACGT	6 cut(s)	106, 329, 370, 575, 2218, 2236
TaqI	TCGA	5 cut(s)	639, 703, 728, 1622, 2417
TatI	WGTACW	2 cut(s)	222, 2542
TauI	GCSGC	1 cut(s)	31
TfiI	GAWTC	7 cut(s)	662, 712, 1085, 1246, 1580, 1838, 2200
Tru1I	TTAA	9 cut(s)	249, 896, 1106, 1182, 1364, 2102, 2211, 2658, 2672
Tru9I	TTAA	9 cut(s)	249, 896, 1106, 1182, 1364, 2102, 2211, 2658, 2672
TscAI	CASTG	5 cut(s)	1696, 2275, 2349, 2360, 2437
TseFI	GTSAC	4 cut(s)	944, 1687, 2038, 2344
TseI	GCWGC	9 cut(s)	35, 242, 263, 266, 643, 1220, 1430, 1660, 1760
Tsp45I	GTSAC	4 cut(s)	944, 1687, 2038, 2344
TspGWI	ACGGA	2 cut(s)	744, 2356
TspRI	CASTG	5 cut(s)	1696, 2275, 2349, 2360, 2437
Van91I	CCANNNNNTGG	1 cut(s)	1198
Vha464I	CTTAAG	1 cut(s)	1363
VpaK11BI	GGWCC	5 cut(s)	813, 1416, 1508, 2137, 2312
XagI	CCTNNNNNAGG	1 cut(s)	1568
XapI	RAATTY	5 cut(s)	469, 1010, 1905, 2503, 2691
XbaI	TCTAGA	3 cut(s)	521, 2191, 2522
XmnI	GAANNNNTTC	3 cut(s)	1584, 1634, 1817
XspI	CTAG	8 cut(s)	522, 1124, 1521, 2024, 2114, 2133, 2192, 2523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.