Rh7CG358600
TCP Family

T-complex protein 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0005785
Physical Location & Seq
Reverse (-)
44404727 .. 44411209
6483 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG358600.1

Sequence Viewer

Length: 3204 bp
ATGCGCTTAGCTAAGTTGGATGAGTTGCGGCAAGCAGCTAAAAGTGAGGTAGAAATGCGTTTTGAGAAGGAACGACAGAAGCTTGGTTCAAAAGTTGAATTACGTTTTCAGCAGGCAGAGGCAAATAGAATGCTTATGCTCAAGGCTTATAGACAAAGAAGGGCCAACTTGAAGGAGAGGTCATCTCAGTCATTGTTGCGAAAGATGGCTTGGGAGAATAAGTACAAGGAGCGCGTGCGTGCTGCAATTAACCAAAAACGCGCAGCTGCTGAGAAAAAGCGACTGGTACTTTTGGAAGAAGAGAAGAAGAGGGCATACGCCAGGACGTTGCAAGTGCAAAGAGTAGCGAAGTCTGTCTCTCACCAACGTGAGATTGAAAGGAGAGCGAAAAGGGATCAGTTAGAAGACCGGTTGCAGAGGGCAAAGAGACAAAGAGCAGAATATCTCAAGCAAAGAGGAAAGATACAGAATTCATTTCAAGTCAGTTGGAATAGGATGCACAAACAGGCTGATTTCCTGTCTAGAAAGTTAGCAAGGTGTTGGAGACGGTTCCACAGGCTAAAGAGAACTACGTTTGCTTTGGCAAAAGCTTACAATACCTTGAAACTTGAGGAAAATAGCGTCAAGTCAATGCCGTTCGAGCAGCTTGCAATTCTGATTGAATCACCTGATACCCTTCAGACTGGGAAGGCTCTACTTGATCGACTTGAGAATCGGTTGAAAGTCTCCAAGACTGTAGCCTCTATAAACTATCCGTCTAGTATTGATAACATAGATCACCTTCTCAAACGAGTTGCTTCTCCCAAAAGGAGGACCACACCAAGGACATCTTTGAGAAGCAGGGAGGGAAAGAAAGCCTCTTCTGTCAGGGCCACAACCAGAACTTCGGCTAAATTAACAAGGTATCAAGTGAGAGTGGTTCTTTGCGCTTACATGATTTTGAGTCATCCAGATGCGGTTTTCAATGGTCAAGGAGAGCGTGAGACTTCTCTGGCCAAATCTGCAGAAGAATTTGTTAGAGAGTTTGAGTTGTTGGTGAAGACTATATTACAGGGCCCCGTCAACAGTTCTGAGGAAGAGTCTGATTCCACATCGCCCAAACGCTTAACCTTCAGATCTCAGCTAGGAGCTTTTGATAAAGCGTGGTGCTCCTACTTGAGTTGCTTTGTGGCATGGAAGGTTAAGGATGCCCAGTTGTTGGAGGGAGATTTAGTGAGGGCAGCTTGCCAGATGGAGCTGTCTATGATTCAAACTTGCAAGATGACTTCAGAAGGACATACTGCCGATCTCACTCATGATATGAAGGCTATTCAGAAACAGGTCGCAGAAGACCAAAAGCTACTGAGAGAAAAGGTGCAACACTTAAGTGGAGAAGCTGGGATTGAGCGCATGACATCTGCTTTATCTGAAACACGGTCCAAGTATTTTGCAGCAAAGGAAAATGGAAGTCCATCAGGGTTGCAAACCACACAGTTTGTTTCTCCAAGCCCTCCAAGTTCATCAGCTGGTCCTTCTGTTTCTAGCTTAGATAAGAAGAGTAATCCAAGTCGTGTAGTTCGTTCCCTATTTCAGGAAGATGAATCTATTCGTCCGAAAGGATTAGAGTCAACTGAGATTGGATTGATTGTGAATGAGTTCTCTAAGACCAATTTGAGTGGGCAGCTCGGATCTTCTTCCCAAAAGCCGGTCACTGAGAATGAACTGATTGTGAATGAGTTTCTCCATGAGCAAAACCAGGCTTTTGCTAATATTTTCAATGCTGCCGATGAAGATCAAAATAACGTCCAGTCAAAGATCAGAAACACTATGGAGAAGGCTTTCTGGGATGGCATAATGGAATCTGTAAACCAGGAAGAGCCCAACTATGACCGGATCATTCAACTGTTGGAGGAGGTGAGGGATGAAATTTGCACCATGGCTCCACAGAGCTGGAAACAAGAAATTGTTGAAGCAATTGATGTGGATATTCTCTCTCAGGTGCTAAAATCTGGTAACCTGGATATTGATTACCTGGGAAAGATCCTAGAGTTTTCAATGGTCACTTTGCGAAAGCTCTCCGCTCCTGCGAATGATGATGAAATGATGGCCACTCTCCAGAGTTTAAGGAAAGAACTAGATGAGATATGTAATGCTAGGGACCAATCCAACTGCTCAGGTGTCATTGCTATGATCAAGGGTCTGCGTTTTGTTCTAGAGCAGATTCAGGTGCTTAAACGTGAGATTAGCAAAGCACGTATAAGAATAATGGAGCCTTTGTTGAAGGGGCCCACTGGTTTGCAGTACCTTAGAAATGCCTTTACCAATCGCTATGGACCTGCCTCAGATGCCAATACCTCTCTACCAGTGACGGTGCAGTGGCTTTCATCCGTGTGGAATTGCAAAGATCAGGAGTGGCAAGAACATAAGATTGCTTCCTCGACTTTGATGAGCAGTGATAATTTGTCTCATGAGTTTCTTCCTTCCACCACCCTTAGAAGTGGTGGAAGCTTTTTGTTGAAATCAAATTCTTCATCGCTGTCTTCTAGAAATAGCCAAGGTAATGTACAACCGGAATGCAAGGGAGAAGGAGTTGATTTATTGGTGAGGCTCGGCTTGTTGAAGTTGGTGAGTGGTGTTTCTGGTCTGACTGAAGAGGCCCTGCCTGAAACTTTTATGCTTAACCTTTCTAGATTAAGGGCTGTGCAGGCTCAAATTCAGAAAATTATTGTTTCTTCCATAAGCATTCTTATTTGCCGGCAAACCATATTAAGTGAGGGGGTGATAACAATGCCCACAGACATGGAGGGCATTCTGTCAAGATGCATTGAGCGGCTTTTGGGGATATTGGACGGTGTTGAAGATGCAGGTATGGAAGAAATTGTTGAATCAATCAGTGATTTCTCCATCAATGGAAATGAAGTTGTGGACACTGAGAAAGTTCGGTCAAGAAAGATGGTTATAGCCCGGATGTTAGCAAAGAGCCTGCAAGCTGGGGATCCCGTGTTTGAGAGGGTTTCCCGTGCTGTTTATATGGCTGCAAGAGGAGCAGTTCTTGGGGGGAGTGGACCTGTTGGAAGAAAATTGGCTGAAACTGCACTCCGGCAAGTTGGAGCAGCGGTGCTGACTGACAGTGTGGTGGAAGCTACTGAAGTTTTAGTTGTGGCTGCTACCATATCAGTTGGTGTTCATGGAGCATGGTATATACATATGACTGATAACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tcp11

Protein Analysis

1067

Amino Acids

120.01

Weight (kDa)

9.34

Isoelectric Point (pI)

51.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tcp11 PF05794 570 - 1063 5.5e-75 T-complex protein 11
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2323, 2834
AccB7I CCANNNNNTGG 1 cut(s) 1198
AccBSI CCGCTC 2 cut(s) 2060, 2809
AccII CGCG 2 cut(s) 234, 261
AciI CCGC 5 cut(s) 28, 956, 2058, 2809, 3095
AclWI GGATC 6 cut(s) 402, 1675, 1880, 2014, 2969, 2982
AcoI YGGCCR 2 cut(s) 993, 2085
AcsI RAATTY 5 cut(s) 469, 1010, 1905, 2503, 2691
AcuI CTGAAG 5 cut(s) 662, 1096, 1251, 2649, 3147
AfaI GTAC 4 cut(s) 224, 288, 2282, 2544
AfiI CCNNNNNNNGG 5 cut(s) 810, 822, 1198, 1570, 1684
AflII CTTAAG 1 cut(s) 1363
AflIII ACRYGT 1 cut(s) 3198
AgeI ACCGGT 1 cut(s) 408
AjnI CCWGG 5 cut(s) 320, 1734, 1848, 1995, 2010
AjuI GAANNNNNNNTTGG 2 cut(s) 193, 225
AleI CACNNNNGTG 2 cut(s) 366, 1365
Alw21I GWGCWC 1 cut(s) 1151
Alw26I GTCTC 6 cut(s) 361, 421, 538, 730, 977, 2448
AlwI GGATC 6 cut(s) 402, 1675, 1880, 2014, 2969, 2982
AlwNI CAGNNNCTG 1 cut(s) 269
AoxI GGCC 7 cut(s) 162, 870, 993, 1054, 2085, 2264, 2634
ApaI GGGCCC 2 cut(s) 1058, 2268
ApoI RAATTY 5 cut(s) 469, 1010, 1905, 2503, 2691
AsiGI ACCGGT 1 cut(s) 408
Asp700I GAANNNNTTC 3 cut(s) 1584, 1634, 1817
AspLEI GCGC 5 cut(s) 6, 234, 263, 929, 1389
AsuC2I CCSGG 1 cut(s) 2944
AsuHPI GGTGA 8 cut(s) 353, 657, 770, 1048, 1906, 2593, 2617, 2770
AvaII GGWCC 6 cut(s) 813, 1416, 1508, 2137, 2312, 3044
BaeGI GKGCMC 2 cut(s) 1058, 2268
BalI TGGCCA 2 cut(s) 995, 2087
BamHI GGATCC 1 cut(s) 2974
BanII GRGCYC 3 cut(s) 1058, 1860, 2268
BarI GAAGNNNNNNTAC 2 cut(s) 299, 331
BbsI GAAGAC 4 cut(s) 411, 1046, 1335, 2511
Bbv12I GWGCWC 1 cut(s) 1151
BccI CCATC 7 cut(s) 199, 1225, 1459, 1820, 2077, 2891, 2926
BceAI ACGGC 1 cut(s) 619
BcgI CGANNNNNNTGC 2 cut(s) 629, 663
BciT130I CCWGG 5 cut(s) 322, 1736, 1850, 1997, 2012
BclI TGATCA 1 cut(s) 2169
BcnI CCSGG 1 cut(s) 2944
BcoDI GTCTC 6 cut(s) 361, 421, 538, 730, 977, 2448
BfmI CTRYAG 2 cut(s) 735, 1002
BfrI CTTAAG 1 cut(s) 1363
BfuAI ACCTGC 2 cut(s) 2323, 2834
BglII AGATCT 1 cut(s) 1115
BlpI GCTNAGC 1 cut(s) 7
Bme1390I CCNGG 6 cut(s) 322, 1736, 1850, 1997, 2012, 2944
Bme18I GGWCC 6 cut(s) 813, 1416, 1508, 2137, 2312, 3044
BmiI GGNNCC 9 cut(s) 551, 1056, 1057, 1920, 2138, 2250, 2265, 2266, 2976
BmrFI CCNGG 6 cut(s) 322, 1736, 1850, 1997, 2012, 2944
BmrI ACTGGG 2 cut(s) 693, 1186
BmsI GCATC 6 cut(s) 486, 943, 1177, 2314, 2789, 2830
BmuI ACTGGG 2 cut(s) 693, 1186
BpiI GAAGAC 4 cut(s) 411, 1046, 1335, 2511
BplI GAGNNNNNCTC 2 cut(s) 169, 201
BpmI CTGGAG 1 cut(s) 2078
Bpu10I CCTNAGC 1 cut(s) 2152
Bpu1102I GCTNAGC 1 cut(s) 7
BpuEI CTTGAG 5 cut(s) 125, 431, 629, 728, 1177
BpuMI CCSGG 1 cut(s) 2944
BsaAI YACGTR 1 cut(s) 2234
BsaBI GATNNNNATC 1 cut(s) 1770
BsaJI CCNNGG 4 cut(s) 821, 1914, 2011, 2533
BsaWI WCCGGW 3 cut(s) 408, 1869, 2548
Bsc4I CCNNNNNNNGG 5 cut(s) 810, 822, 1198, 1570, 1684
Bse118I RCCGGY 3 cut(s) 408, 1684, 2733
Bse1I ACTGG 6 cut(s) 288, 688, 1192, 1786, 2275, 2342
Bse3DI GCAATG 1 cut(s) 2160
Bse8I GATNNNNATC 1 cut(s) 1770
BseBI CCWGG 5 cut(s) 322, 1736, 1850, 1997, 2012
BseDI CCNNGG 4 cut(s) 821, 1914, 2011, 2533
BseGI GGATG 8 cut(s) 25, 501, 946, 1192, 1831, 1906, 2363, 2952
BseJI GATNNNNATC 1 cut(s) 1770
BseLI CCNNNNNNNGG 5 cut(s) 810, 822, 1198, 1570, 1684
BseMI GCAATG 1 cut(s) 2160
BseNI ACTGG 6 cut(s) 288, 688, 1192, 1786, 2275, 2342
BseRI GAGGAG 2 cut(s) 1904, 3036
BseSI GKGCMC 2 cut(s) 1058, 2268
BseYI CCCAGC 2 cut(s) 1376, 2969
BsgI GTGCAG 3 cut(s) 2372, 2702, 3057
Bsh1236I CGCG 2 cut(s) 234, 261
BshFI GGCC 7 cut(s) 164, 872, 995, 1056, 2087, 2266, 2636
BshTI ACCGGT 1 cut(s) 408
BsiHKAI GWGCWC 1 cut(s) 1151
BsiSI CCGG 7 cut(s) 409, 1685, 1870, 2549, 2734, 2944, 3079
BslFI GGGAC 1 cut(s) 2150
BslI CCNNNNNNNGG 5 cut(s) 810, 822, 1198, 1570, 1684
BsmAI GTCTC 6 cut(s) 361, 421, 538, 730, 977, 2448
BsmBI CGTCTC 1 cut(s) 538
BsmFI GGGAC 1 cut(s) 2150
BsmI GAATGC 4 cut(s) 135, 2558, 2721, 2787
BsnI GGCC 7 cut(s) 164, 872, 995, 1056, 2087, 2266, 2636
Bsp120I GGGCCC 2 cut(s) 1054, 2264
Bsp1286I GDGCHC 4 cut(s) 1058, 1151, 1860, 2268
Bsp1407I TGTACA 1 cut(s) 2542
Bsp1720I GCTNAGC 1 cut(s) 7
Bsp19I CCATGG 1 cut(s) 1914
BspACI CCGC 5 cut(s) 28, 956, 2058, 2809, 3095
BspANI GGCC 7 cut(s) 164, 872, 995, 1056, 2087, 2266, 2636
BspFNI CGCG 2 cut(s) 234, 261
BspHI TCATGA 2 cut(s) 1294, 2446
BspLI GGNNCC 9 cut(s) 551, 1056, 1057, 1920, 2138, 2250, 2265, 2266, 2976
BspMAI CTGCAG 1 cut(s) 1006
BspMI ACCTGC 2 cut(s) 2323, 2834
BspPI GGATC 6 cut(s) 402, 1675, 1880, 2014, 2969, 2982
BspQI GCTCTTC 1 cut(s) 1848
BspTI CTTAAG 1 cut(s) 1363
BsrBI CCGCTC 2 cut(s) 2060, 2809
BsrDI GCAATG 1 cut(s) 2160
BsrFI RCCGGY 3 cut(s) 408, 1684, 2733
BsrGI TGTACA 1 cut(s) 2542
BsrI ACTGG 6 cut(s) 288, 688, 1192, 1786, 2275, 2342
BssAI RCCGGY 3 cut(s) 408, 1684, 2733
BssECI CCNNGG 4 cut(s) 821, 1914, 2011, 2533
BssT1I CCWWGG 3 cut(s) 821, 1914, 2533
Bst2UI CCWGG 5 cut(s) 322, 1736, 1850, 1997, 2012
Bst4CI ACNGT 9 cut(s) 549, 736, 1067, 1416, 1473, 1884, 2350, 2831, 3110
Bst6I CTCTTC 7 cut(s) 294, 302, 865, 1071, 1529, 1848, 2625
BstAFI CTTAAG 1 cut(s) 1363
BstAUI TGTACA 1 cut(s) 2542
BstBAI YACGTR 1 cut(s) 2234
BstDSI CCRYGG 1 cut(s) 1914
BstEII GGTNACC 1 cut(s) 1991
BstENI CCTNNNNNAGG 1 cut(s) 1568
BstF5I GGATG 8 cut(s) 25, 501, 946, 1192, 1831, 1906, 2363, 2952
BstFNI CGCG 2 cut(s) 234, 261
BstHHI GCGC 5 cut(s) 6, 234, 263, 929, 1389
BstMAI GTCTC 6 cut(s) 361, 421, 538, 730, 977, 2448
BstMWI GCNNNNNNNGC 6 cut(s) 640, 1001, 2324, 2684, 3023, 3071
BstNI CCWGG 5 cut(s) 322, 1736, 1850, 1997, 2012
BstNSI RCATGY 1 cut(s) 3202
BstPI GGTNACC 1 cut(s) 1991
BstSCI CCNGG 6 cut(s) 320, 1734, 1848, 1995, 2010, 2942
BstSFI CTRYAG 2 cut(s) 735, 1002
BstSLI GKGCMC 2 cut(s) 1058, 2268
BstUI CGCG 2 cut(s) 234, 261
BstV2I GAAGAC 4 cut(s) 411, 1046, 1335, 2511
BstX2I RGATCY 4 cut(s) 1115, 1667, 2019, 2974
BstXI CCANNNNNNTGG 2 cut(s) 1929, 2779
BstYI RGATCY 4 cut(s) 1115, 1667, 2019, 2974
BsuRI GGCC 7 cut(s) 164, 872, 995, 1056, 2087, 2266, 2636
BtgI CCRYGG 1 cut(s) 1914
BtgZI GCGATG 2 cut(s) 1077, 2496
BtsCI GGATG 8 cut(s) 25, 501, 946, 1192, 1831, 1906, 2363, 2952
BtsI GCAGTG 2 cut(s) 2360, 2437
BtsIMutI CAGTG 8 cut(s) 1689, 2268, 2349, 2360, 2437, 2878, 2907, 3115
BveI ACCTGC 2 cut(s) 2323, 2834
CaiI CAGNNNCTG 1 cut(s) 269
CciI TCATGA 2 cut(s) 1294, 2446
CfoI GCGC 5 cut(s) 6, 234, 263, 929, 1389
Cfr10I RCCGGY 3 cut(s) 408, 1684, 2733
CseI GACGC 1 cut(s) 610
Csp6I GTAC 4 cut(s) 223, 287, 2281, 2543
CspAI ACCGGT 1 cut(s) 408
CspCI CAANNNNNGTGG 6 cut(s) 1456, 1491, 1636, 1671, 1941, 1976
CviQI GTAC 4 cut(s) 223, 287, 2281, 2543
EaeI YGGCCR 2 cut(s) 993, 2085
Eam1104I CTCTTC 7 cut(s) 294, 302, 865, 1071, 1529, 1848, 2625
EarI CTCTTC 7 cut(s) 294, 302, 865, 1071, 1529, 1848, 2625
Eco130I CCWWGG 3 cut(s) 821, 1914, 2533
Eco24I GRGCYC 3 cut(s) 1058, 1860, 2268
Eco47I GGWCC 6 cut(s) 813, 1416, 1508, 2137, 2312, 3044
Eco57I CTGAAG 5 cut(s) 662, 1096, 1251, 2649, 3147
Eco91I GGTNACC 1 cut(s) 1991
EcoNI CCTNNNNNAGG 1 cut(s) 1568
EcoO109I RGGNCCY 4 cut(s) 1054, 1055, 2264, 2635
EcoO65I GGTNACC 1 cut(s) 1991
EcoRI GAATTC 1 cut(s) 469
EcoRII CCWGG 5 cut(s) 320, 1734, 1848, 1995, 2010
EcoT14I CCWWGG 3 cut(s) 821, 1914, 2533
EcoT22I ATGCAT 1 cut(s) 2804
EcoT38I GRGCYC 3 cut(s) 1058, 1860, 2268
ErhI CCWWGG 3 cut(s) 821, 1914, 2533
Esp3I CGTCTC 1 cut(s) 538
FalI AAGNNNNNCTT 2 cut(s) 814, 846
FaqI GGGAC 1 cut(s) 2150
FauNDI CATATG 1 cut(s) 3186
FbaI TGATCA 1 cut(s) 2169
FokI GGATG 8 cut(s) 32, 508, 933, 1199, 1838, 1913, 2350, 2959
FriOI GRGCYC 3 cut(s) 1058, 1860, 2268
GlaI GCGC 5 cut(s) 5, 233, 262, 928, 1388
GsaI CCCAGC 2 cut(s) 1380, 2973
GsuI CTGGAG 1 cut(s) 2078
HaeIII GGCC 7 cut(s) 164, 872, 995, 1056, 2087, 2266, 2636
HapII CCGG 7 cut(s) 409, 1685, 1870, 2549, 2734, 2944, 3079
HgaI GACGC 1 cut(s) 610
HhaI GCGC 5 cut(s) 6, 234, 263, 929, 1389
Hin6I GCGC 5 cut(s) 4, 232, 261, 927, 1387
HinP1I GCGC 5 cut(s) 4, 232, 261, 927, 1387
HincII GTYRAC 2 cut(s) 1063, 1608
HindII GTYRAC 2 cut(s) 1063, 1608
HindIII AAGCTT 3 cut(s) 80, 588, 2485
HpaII CCGG 7 cut(s) 409, 1685, 1870, 2549, 2734, 2944, 3079
HphI GGTGA 8 cut(s) 353, 657, 770, 1048, 1906, 2593, 2617, 2770
Hpy166II GTNNAC 5 cut(s) 1063, 1608, 1846, 2905, 3044
Hpy8I GTNNAC 5 cut(s) 1063, 1608, 1846, 2905, 3044
HpyCH4III ACNGT 9 cut(s) 549, 736, 1067, 1416, 1473, 1884, 2350, 2831, 3110
HpyCH4IV ACGT 7 cut(s) 103, 326, 367, 572, 1782, 2215, 2233
HpyF10VI GCNNNNNNNGC 6 cut(s) 640, 1001, 2324, 2684, 3023, 3071
HpySE526I ACGT 7 cut(s) 103, 326, 367, 572, 1782, 2215, 2233
HspAI GCGC 5 cut(s) 4, 232, 261, 927, 1387
KroI GCCGGC 1 cut(s) 2733
KroNI GCCGGC 1 cut(s) 2735
Ksp22I TGATCA 1 cut(s) 2169
LguI GCTCTTC 1 cut(s) 1848
LweI GCATC 6 cut(s) 486, 943, 1177, 2314, 2789, 2830
MaeII ACGT 7 cut(s) 103, 326, 367, 572, 1782, 2215, 2233
MaeIII GTNAC 4 cut(s) 1687, 1991, 2038, 2344
MbiI CCGCTC 2 cut(s) 2060, 2809
MfeI CAATTG 1 cut(s) 1953
MflI RGATCY 4 cut(s) 1115, 1667, 2019, 2974
MhlI GDGCHC 4 cut(s) 1058, 1151, 1860, 2268
MlsI TGGCCA 2 cut(s) 995, 2087
MluNI TGGCCA 2 cut(s) 995, 2087
MlyI GAGTC 3 cut(s) 952, 1088, 1613
MmeI TCCRAC 7 cut(s) 467, 521, 1179, 1866, 2169, 3031, 3067
Mox20I TGGCCA 2 cut(s) 995, 2087
Mph1103I ATGCAT 1 cut(s) 2804
MroNI GCCGGC 1 cut(s) 2733
MroXI GAANNNNTTC 3 cut(s) 1584, 1634, 1817
MscI TGGCCA 2 cut(s) 995, 2087
MslI CAYNNNNRTG 6 cut(s) 366, 951, 1365, 2165, 2368, 2777
Msp20I TGGCCA 2 cut(s) 995, 2087
MspA1I CMGCKG 3 cut(s) 266, 1505, 3095
MspCI CTTAAG 1 cut(s) 1363
MspI CCGG 7 cut(s) 409, 1685, 1870, 2549, 2734, 2944, 3079
MspR9I CCNGG 6 cut(s) 322, 1736, 1850, 1997, 2012, 2944
MunI CAATTG 1 cut(s) 1953
Mva1269I GAATGC 4 cut(s) 135, 2558, 2721, 2787
MvaI CCWGG 5 cut(s) 322, 1736, 1850, 1997, 2012
MvnI CGCG 2 cut(s) 234, 261
MwoI GCNNNNNNNGC 6 cut(s) 640, 1001, 2324, 2684, 3023, 3071
NaeI GCCGGC 1 cut(s) 2735
NciI CCSGG 1 cut(s) 2944
NcoI CCATGG 1 cut(s) 1914
NdeI CATATG 1 cut(s) 3186
NgoMIV GCCGGC 1 cut(s) 2733
NlaIV GGNNCC 9 cut(s) 551, 1056, 1057, 1920, 2138, 2250, 2265, 2266, 2976
NmeAIII GCCGAG 1 cut(s) 2568
NmuCI GTSAC 3 cut(s) 1687, 2038, 2344
NsiI ATGCAT 1 cut(s) 2804
NspI RCATGY 1 cut(s) 3202
OliI CACNNNNGTG 2 cut(s) 366, 1365
PagI TCATGA 2 cut(s) 1294, 2446
PciI ACATGT 1 cut(s) 3198
PciSI GCTCTTC 1 cut(s) 1848
PcsI WCGNNNNNNNCGW 1 cut(s) 1555
PctI GAATGC 4 cut(s) 135, 2558, 2721, 2787
PdiI GCCGGC 1 cut(s) 2735
PdmI GAANNNNTTC 3 cut(s) 1584, 1634, 1817
PfeI GAWTC 8 cut(s) 662, 712, 1085, 1246, 1580, 1838, 2200, 2864
PflMI CCANNNNNTGG 1 cut(s) 1198
PinAI ACCGGT 1 cut(s) 408
PleI GAGTC 3 cut(s) 951, 1087, 1612
PpsI GAGTC 3 cut(s) 951, 1087, 1612
Ppu21I YACGTR 1 cut(s) 2234
PscI ACATGT 1 cut(s) 3198
Psp6I CCWGG 5 cut(s) 320, 1734, 1848, 1995, 2010
PspEI GGTNACC 1 cut(s) 1991
PspFI CCCAGC 2 cut(s) 1376, 2969
PspGI CCWGG 5 cut(s) 320, 1734, 1848, 1995, 2010
PspN4I GGNNCC 9 cut(s) 551, 1056, 1057, 1920, 2138, 2250, 2265, 2266, 2976
PspOMI GGGCCC 2 cut(s) 1054, 2264
PstI CTGCAG 1 cut(s) 1006
PstNI CAGNNNCTG 1 cut(s) 269
PsuI RGATCY 4 cut(s) 1115, 1667, 2019, 2974
PvuII CAGCTG 2 cut(s) 266, 1505
RsaI GTAC 4 cut(s) 224, 288, 2282, 2544
RsaNI GTAC 4 cut(s) 223, 287, 2281, 2543
RseI CAYNNNNRTG 6 cut(s) 366, 951, 1365, 2165, 2368, 2777
SapI GCTCTTC 1 cut(s) 1848
SchI GAGTC 3 cut(s) 952, 1088, 1613
ScrFI CCNGG 6 cut(s) 322, 1736, 1850, 1997, 2012, 2944
SduI GDGCHC 4 cut(s) 1058, 1151, 1860, 2268
SfaNI GCATC 6 cut(s) 486, 943, 1177, 2314, 2789, 2830
SfcI CTRYAG 2 cut(s) 735, 1002
SinI GGWCC 6 cut(s) 813, 1416, 1508, 2137, 2312, 3044
SmiMI CAYNNNNRTG 6 cut(s) 366, 951, 1365, 2165, 2368, 2777
SmlI CTYRAG 6 cut(s) 140, 446, 608, 707, 1156, 1363
SmoI CTYRAG 6 cut(s) 140, 446, 608, 707, 1156, 1363
SsiI CCGC 5 cut(s) 28, 956, 2058, 2809, 3095
SspI AATATT 1 cut(s) 1750
StyD4I CCNGG 6 cut(s) 320, 1734, 1848, 1995, 2010, 2942
StyI CCWWGG 3 cut(s) 821, 1914, 2533
TaaI ACNGT 9 cut(s) 549, 736, 1067, 1416, 1473, 1884, 2350, 2831, 3110
TaiI ACGT 7 cut(s) 106, 329, 370, 575, 1785, 2218, 2236
TaqI TCGA 3 cut(s) 639, 703, 2417
TaqII GACCGA 1 cut(s) 2910
TatI WGTACW 2 cut(s) 222, 2542
TauI GCSGC 2 cut(s) 31, 2812
TfiI GAWTC 8 cut(s) 662, 712, 1085, 1246, 1580, 1838, 2200, 2864
TscAI CASTG 8 cut(s) 1696, 2275, 2349, 2360, 2437, 2878, 2914, 3115
TseFI GTSAC 3 cut(s) 1687, 2038, 2344
Tsp45I GTSAC 3 cut(s) 1687, 2038, 2344
TspGWI ACGGA 2 cut(s) 744, 2356
TspRI CASTG 8 cut(s) 1696, 2275, 2349, 2360, 2437, 2878, 2914, 3115
Van91I CCANNNNNTGG 1 cut(s) 1198
Vha464I CTTAAG 1 cut(s) 1363
VpaK11BI GGWCC 6 cut(s) 813, 1416, 1508, 2137, 2312, 3044
XagI CCTNNNNNAGG 1 cut(s) 1568
XapI RAATTY 5 cut(s) 469, 1010, 1905, 2503, 2691
XbaI TCTAGA 4 cut(s) 521, 2191, 2522, 2666
XceI RCATGY 1 cut(s) 3202
XmnI GAANNNNTTC 3 cut(s) 1584, 1634, 1817
Zsp2I ATGCAT 1 cut(s) 2804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.