RchiOBHm_Chr7g0221251
TCP Family

T-complex protein 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0005785
Physical Location & Seq
Reverse (-)
42170845 .. 42177312
6468 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19796

Sequence Viewer

Length: 3525 bp
ATGGTCCCCGGCGGTGTAGTTTTGGATTTCCCGGCCGGTGAAACGCCGTCGTCTCCTCCAAGACTACCCCGCAGGCTCAGACGGAGGCGCGACCTTGTTCAGTCCTCCAAGACTCCCAACACTGTCGAACAAATCCAAACCAAGCTTCGACTCGCCGATCTTCGCCGCCAGGAACACTATGAAAAGTTGTCAAACAAGGCCCGGACAAAGCCCAGAAGCCCCTCTCGGTCTTCTTCTCAAGAGGAAGACCTTGGCGAGCGACTGGATGCCAAGCTCCAAGCTGCTGAGAAGAAAAGGTTGCTTATTTTGGAAAGTGCTCAAATGCGCTTAGCTAAGTTGGATGAGTTGCGGCAAGCAGCTAAAAGTGAGGTAGAAATGCGTTTTGAGAAGGAACGACAGAAGCTTGGTTCAAAAGTTGAATTACGTTTTCAGCAGGCAGAGGCAAATAGAATGCTTATGCTCAAGGCTTATAGACAAAGAAGGGCCAACTTGAAGGAGAGGTCATCTCAGTCATTGTTGCGAAAGATGGCTTGGGAGAATAAGTACAAGGAGCGCGTGCGTGCTGCAATTAACCAAAAACGCGCAGCTGCTGAGAAAAAGCGACTGGTACTTTTGGAAGAAGAGAAGAAGAGGGCATATGCCAGGACGTTGCAAGTGCAAAGAGTAGCGAAGTCTGTCTCTCACCAACGTGAGATTGAAAGGAGAGCGAAAAGGGATCAGTTAGAAGACCGGTTGCAGAGGGCAAAGAGACAAAGAGCAGAATATCTCAAGCAAAGAGGAAAGATACAGAATTCATTTCAAGTCAGTTGGAATAGGATGCACAAACAGGCTGATTTCCTGTCTAGAAAGTTAGCAAGGTGTTGGAGACGGTTCCACAGGCTAAAGAGAACTACGTTTGCTTTGGCAAAAGCTTACAATACCTTGAAACTTGAGGAAAATAGCGTCAAGTCAATGCCGTTCGAGCAGCTTGCAATTCTGATTGAATCACCTGATACCCTTCAGACTGGGAAGGCTCTACTTGATCGACTTGAGAATCGGTTGAAAGTCTCCAAGACTGTAGCCTCTATAAACTATCCGTCCAGTATTGATAACATAGATCACCTTCTCAAACGAGTTGCTTCTCCCAAAAGGAGGACCACACCAAGGACATCTTTGAGAAGCAGGGAGGGAAAGAAAGCCTCTTCTGTCAGGGCCACAACCAGAACTTCAGCTAAATTAACAAGGTATCAAGTGAGAGTGGTTCTTTGCGCTTACATGATTTTGAGTCATCCAGATGCGGTTTTCAATGGTCAAGGAGAGCGTGAGACTTCTCTGGCCAAATCTGCAGAAGAATTTGTTAGAGAGTTTGAGTTGTTGGTGAAGACTATATTACAGGGCCCGGTCAACAGTTCTGAGGAAGAGTCTGATTCCACATCGCCCAAACGCTTAACCTTCAGATCTCAGCTAGGAGCTTTTGATAAAGCGTGGTGCTCCTACTTGAGTTGCTTTGTGGCATGGAAGGTTAAGGATGCCCAGTTGTTGGAGGGAGATTTAGTGAGGGCAGCTTGCCAGATGGAGCTGTCTATGATTCAAACTTGCAAGATGACTTCAGAAGGACATACTGCCGATCTCACTCATGATATGAAGGCTATTCAGAAACAGGTCGCAGAAGACCAAAAGCTACTGAGGGAAAAGGTGCAACACTTAAGTGGAGAAGCTGGGATTGAGCGCATGACATCTGCTTTATCTGAAACACGGTCCAAGTATTTTGCAGCAAAGGAAAATGGAAGTCCATCAGGGTTGCAAACCACACAGTTTGTTTCTCCAAGCCCTCCAAGTTCATCAGCTGGTCCTTCTGTTTCTAGCTTAGATAAGAAGAGTAATCCAAGTCGTGTAGTTCGTTCCCTATTTCAGGAAGATGAATCTATTCGTCCTAAAGGATTAGAGTCAACTGAGATTGGATTGATTGTGAATGAGTTCTCTAAGACCAATTTGAGTGGGCAGCTCGGATCTTCTTCCCAAAAGCCGGTCACTGAGAATGAACTGATTGTGAATGAGTTTCTCCATGAGCAAAACCAGGCTTTTGCCAATATTTTCAATGCTGCCGATGAAGATCAAAATAATGTCCAGTCAAAGATCAGAAACACTATGGAGAAGGCTTTCTGGGATGGCATAATGGAATCTGTAAACCAGGAAGAGCCCAACTATGACCGGATCATTCAACTGTTGGAGGAGGTGAGGGATGAAATTTGCACCATGGCTCCACAGAGCTGGAAACAAGAAATTGTTGAAGCAATTGATGTGGATATTCTCTCTCAGGTGCTAAAATCTGGTAACCTGGATATTGATTACCTGGGAAAGATCCTAGAGTTTTCAATGGTCACTTTGCGAAAGCTCTCCGCTCCTGCGAATGATGATGAAATGATGGCCACTCTCCAGAGTTTAAGGAAAGAACTAGATGAGATATGTAATGCTAGGGACCAGTCCAACTGCCCAGGTGTCATTGCTATGATCAAGGGTCTGCGTTTTGTTCTAGAGCAGATTCAGGTGCTTAAACGTGAGATTAGCAAAGCACGTATAAGAATAATGGAGCCTTTGTTGAAGGGGCCCACTGGTTTGCAGTACCTTAGAAATGCCTTTGCCAATCGCTATGGACCTGCCTCAGATGCCAATACCTCTCTACCAGTGGCGGTGCAGTGGCTTTCATCCGTGTGGAATTGCAAAGATCAGGAGTGGCAAGAACATAAGATTGCTTCCTCGACTTTGATGAGCAGTGATAATTTGTCTCATGAGTTTCTTCCTTCCACCACCCTTAGAAGTGGTGGAAGCTTTCTGTTGAAATCAAATTCTTCATCGCTGTCTTCTGGAAATAGCCGAGGTAATGTACAACCGGAATGCAAGGGAGAAGGAGTTGATTTGTTGGTGAGGCTCGGCTTGTTGAAGTTGGTGAGTGGTGTTTCTGGTCTGACTGAAGAGGCCCTGCCTGAAACTTTTATGCTTAACCTTTCTAGATTAAGGGCTGTGCAGGCTCAAATTCAGAAAATTATTGTTTCTTCCCTAAGCATTCTTATTTGCCGGCAAACCATATTAAGTGAGGGGGTGATAACAATGCCCTCAGACATGGAGGGCATCCTGTCAAGATGCATTGAGCGACTTTTGGGGATATTGGACAGTGTTGAAGATGCAGGTATGGAAGAAATTGTTGAATCAATCAGTGATTTCTCCATCAATGGAAATGAAGTTGTGGACACTGAGAAAGTTCGGTCAAGAAAGATGGTTATAGCCCGGATGTTAGCAAAGAGCCTGCAAGCTGGGGATCCCGTGTTTGAGAGGGTTTCCCGTGCTGTTTATATGGCTGCAAGAGGAGCGGTTCTTGGGGGGAGTGGACCTGTTGGAAGAAAATTGGCTGAAACTGCACTCCGGCAAGTTGGAGCAGCGGTGCTGATAGACAGTGTGGTGGAAGCTACTGAAGTTTTAGTTGTGGCTGCTACCATATCAGTTGGTGTTCATGGAGCATGGTATATACATATGACTGATAACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tcp11

Protein Analysis

1174

Amino Acids

132.09

Weight (kDa)

9.51

Isoelectric Point (pI)

56.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tcp11 PF05794 677 - 1170 1.6e-73 T-complex protein 11
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2644, 3155
AccB7I CCANNNNNTGG 1 cut(s) 1519
AccBSI CCGCTC 2 cut(s) 2381, 3347
AccII CGCG 3 cut(s) 90, 555, 582
AciI CCGC 9 cut(s) 12, 70, 166, 349, 1277, 2379, 2669, 3347, 3416
AclWI GGATC 6 cut(s) 723, 1996, 2201, 2335, 3290, 3303
AcoI YGGCCR 3 cut(s) 33, 1314, 2406
AcsI RAATTY 5 cut(s) 790, 1331, 2226, 2824, 3012
AcuI CTGAAG 6 cut(s) 983, 1191, 1417, 1572, 2970, 3468
AfaI GTAC 4 cut(s) 545, 609, 2603, 2865
AfiI CCNNNNNNNGG 5 cut(s) 1131, 1143, 1519, 1891, 2005
AflII CTTAAG 1 cut(s) 1684
AflIII ACRYGT 1 cut(s) 3519
AgeI ACCGGT 1 cut(s) 729
AjnI CCWGG 7 cut(s) 168, 641, 2055, 2169, 2316, 2331, 2473
AjuI GAANNNNNNNTTGG 4 cut(s) 129, 161, 514, 546
AleI CACNNNNGTG 2 cut(s) 687, 1686
Alw21I GWGCWC 2 cut(s) 319, 1472
Alw26I GTCTC 7 cut(s) 57, 682, 742, 859, 1051, 1298, 2769
AlwI GGATC 6 cut(s) 723, 1996, 2201, 2335, 3290, 3303
AlwNI CAGNNNCTG 1 cut(s) 590
AoxI GGCC 9 cut(s) 33, 198, 483, 1191, 1314, 1375, 2406, 2585, 2955
ApaI GGGCCC 2 cut(s) 1379, 2589
ApoI RAATTY 5 cut(s) 790, 1331, 2226, 2824, 3012
AsiGI ACCGGT 1 cut(s) 729
Asp700I GAANNNNTTC 3 cut(s) 1905, 1955, 2138
AspLEI GCGC 6 cut(s) 90, 327, 555, 584, 1250, 1710
AsuC2I CCSGG 5 cut(s) 9, 32, 202, 1379, 3265
AsuHPI GGTGA 9 cut(s) 50, 674, 978, 1091, 1369, 2227, 2914, 2938, 3091
AvaII GGWCC 7 cut(s) 4, 1134, 1737, 1829, 2458, 2633, 3365
BaeGI GKGCMC 2 cut(s) 1379, 2589
BalI TGGCCA 2 cut(s) 1316, 2408
BamHI GGATCC 1 cut(s) 3295
BanII GRGCYC 3 cut(s) 1379, 2181, 2589
BbsI GAAGAC 6 cut(s) 222, 252, 732, 1367, 1656, 2832
Bbv12I GWGCWC 2 cut(s) 319, 1472
BccI CCATC 7 cut(s) 520, 1546, 1780, 2141, 2398, 3212, 3247
BceAI ACGGC 2 cut(s) 31, 940
BcgI CGANNNNNNTGC 2 cut(s) 950, 984
BciT130I CCWGG 7 cut(s) 170, 643, 2057, 2171, 2318, 2333, 2475
BclI TGATCA 1 cut(s) 2490
BcnI CCSGG 5 cut(s) 9, 32, 202, 1379, 3265
BcoDI GTCTC 7 cut(s) 57, 682, 742, 859, 1051, 1298, 2769
BfaI CTAG 8 cut(s) 843, 1445, 1842, 2345, 2435, 2454, 2513, 2988
BfmI CTRYAG 2 cut(s) 1056, 1323
BfrI CTTAAG 1 cut(s) 1684
BfuAI ACCTGC 2 cut(s) 2644, 3155
BglII AGATCT 1 cut(s) 1436
BlpI GCTNAGC 1 cut(s) 328
Bme18I GGWCC 7 cut(s) 4, 1134, 1737, 1829, 2458, 2633, 3365
BmiI GGNNCC 9 cut(s) 6, 872, 1377, 2241, 2459, 2571, 2586, 2587, 3297
BmrI ACTGGG 2 cut(s) 1014, 1507
BmsI GCATC 8 cut(s) 256, 807, 1264, 1498, 2635, 3110, 3117, 3151
BmuI ACTGGG 2 cut(s) 1014, 1507
BpiI GAAGAC 6 cut(s) 222, 252, 732, 1367, 1656, 2832
BplI GAGNNNNNCTC 2 cut(s) 490, 522
BpmI CTGGAG 1 cut(s) 2399
Bpu10I CCTNAGC 1 cut(s) 3038
Bpu1102I GCTNAGC 1 cut(s) 328
BpuEI CTTGAG 6 cut(s) 222, 446, 752, 950, 1049, 1498
BpuMI CCSGG 5 cut(s) 9, 32, 202, 1379, 3265
BsaAI YACGTR 1 cut(s) 2555
BsaBI GATNNNNATC 1 cut(s) 2091
BsaJI CCNNGG 7 cut(s) 7, 250, 1142, 2235, 2332, 2473, 2854
BsaWI WCCGGW 3 cut(s) 729, 2190, 2869
Bsc4I CCNNNNNNNGG 5 cut(s) 1131, 1143, 1519, 1891, 2005
Bse118I RCCGGY 4 cut(s) 35, 729, 2005, 3054
Bse1I ACTGG 9 cut(s) 267, 609, 1009, 1080, 1513, 2107, 2461, 2596, 2663
Bse3DI GCAATG 1 cut(s) 2481
Bse8I GATNNNNATC 1 cut(s) 2091
BseBI CCWGG 7 cut(s) 170, 643, 2057, 2171, 2318, 2333, 2475
BseDI CCNNGG 7 cut(s) 7, 250, 1142, 2235, 2332, 2473, 2854
BseJI GATNNNNATC 1 cut(s) 2091
BseLI CCNNNNNNNGG 5 cut(s) 1131, 1143, 1519, 1891, 2005
BseMI GCAATG 1 cut(s) 2481
BseNI ACTGG 9 cut(s) 267, 609, 1009, 1080, 1513, 2107, 2461, 2596, 2663
BseRI GAGGAG 3 cut(s) 45, 2225, 3357
BseSI GKGCMC 2 cut(s) 1379, 2589
BseX3I CGGCCG 1 cut(s) 33
BseYI CCCAGC 2 cut(s) 1697, 3290
BsgI GTGCAG 3 cut(s) 2693, 3023, 3378
Bsh1236I CGCG 3 cut(s) 90, 555, 582
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 9 cut(s) 35, 200, 485, 1193, 1316, 1377, 2408, 2587, 2957
BshTI ACCGGT 1 cut(s) 729
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 2 cut(s) 319, 1472
BslFI GGGAC 1 cut(s) 2471
BslI CCNNNNNNNGG 5 cut(s) 1131, 1143, 1519, 1891, 2005
BsmAI GTCTC 7 cut(s) 57, 682, 742, 859, 1051, 1298, 2769
BsmBI CGTCTC 2 cut(s) 57, 859
BsmFI GGGAC 1 cut(s) 2471
BsmI GAATGC 3 cut(s) 456, 2879, 3042
BsnI GGCC 9 cut(s) 35, 200, 485, 1193, 1316, 1377, 2408, 2587, 2957
Bsp120I GGGCCC 2 cut(s) 1375, 2585
Bsp1286I GDGCHC 5 cut(s) 319, 1379, 1472, 2181, 2589
Bsp1407I TGTACA 1 cut(s) 2863
Bsp1720I GCTNAGC 1 cut(s) 328
Bsp19I CCATGG 1 cut(s) 2235
BspACI CCGC 9 cut(s) 12, 70, 166, 349, 1277, 2379, 2669, 3347, 3416
BspANI GGCC 9 cut(s) 35, 200, 485, 1193, 1316, 1377, 2408, 2587, 2957
BspFNI CGCG 3 cut(s) 90, 555, 582
BspHI TCATGA 2 cut(s) 1615, 2767
BspLI GGNNCC 9 cut(s) 6, 872, 1377, 2241, 2459, 2571, 2586, 2587, 3297
BspMAI CTGCAG 1 cut(s) 1327
BspMI ACCTGC 2 cut(s) 2644, 3155
BspPI GGATC 6 cut(s) 723, 1996, 2201, 2335, 3290, 3303
BspQI GCTCTTC 1 cut(s) 2169
BspTI CTTAAG 1 cut(s) 1684
BsrBI CCGCTC 2 cut(s) 2381, 3347
BsrDI GCAATG 1 cut(s) 2481
BsrFI RCCGGY 4 cut(s) 35, 729, 2005, 3054
BsrGI TGTACA 1 cut(s) 2863
BsrI ACTGG 9 cut(s) 267, 609, 1009, 1080, 1513, 2107, 2461, 2596, 2663
BssAI RCCGGY 4 cut(s) 35, 729, 2005, 3054
BssECI CCNNGG 7 cut(s) 7, 250, 1142, 2235, 2332, 2473, 2854
BssT1I CCWWGG 3 cut(s) 250, 1142, 2235
Bst2UI CCWGG 7 cut(s) 170, 643, 2057, 2171, 2318, 2333, 2475
Bst4CI ACNGT 9 cut(s) 124, 870, 1057, 1388, 1737, 1794, 2205, 3152, 3431
Bst6I CTCTTC 7 cut(s) 615, 623, 1186, 1392, 1850, 2169, 2946
BstAFI CTTAAG 1 cut(s) 1684
BstAUI TGTACA 1 cut(s) 2863
BstBAI YACGTR 1 cut(s) 2555
BstDSI CCRYGG 1 cut(s) 2235
BstEII GGTNACC 1 cut(s) 2312
BstENI CCTNNNNNAGG 1 cut(s) 1889
BstFNI CGCG 3 cut(s) 90, 555, 582
BstHHI GCGC 6 cut(s) 90, 327, 555, 584, 1250, 1710
BstMAI GTCTC 7 cut(s) 57, 682, 742, 859, 1051, 1298, 2769
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 6 cut(s) 961, 1322, 2645, 3005, 3344, 3392
BstNI CCWGG 7 cut(s) 170, 643, 2057, 2171, 2318, 2333, 2475
BstNSI RCATGY 1 cut(s) 3523
BstPI GGTNACC 1 cut(s) 2312
BstSFI CTRYAG 2 cut(s) 1056, 1323
BstSLI GKGCMC 2 cut(s) 1379, 2589
BstUI CGCG 3 cut(s) 90, 555, 582
BstV2I GAAGAC 6 cut(s) 222, 252, 732, 1367, 1656, 2832
BstX2I RGATCY 4 cut(s) 1436, 1988, 2340, 3295
BstXI CCANNNNNNTGG 1 cut(s) 2250
BstYI RGATCY 4 cut(s) 1436, 1988, 2340, 3295
BstZI CGGCCG 1 cut(s) 33
BsuRI GGCC 9 cut(s) 35, 200, 485, 1193, 1316, 1377, 2408, 2587, 2957
BtgI CCRYGG 1 cut(s) 2235
BtgZI GCGATG 2 cut(s) 1398, 2817
BtsI GCAGTG 2 cut(s) 2681, 2758
BveI ACCTGC 2 cut(s) 2644, 3155
CaiI CAGNNNCTG 1 cut(s) 590
CciI TCATGA 2 cut(s) 1615, 2767
CfoI GCGC 6 cut(s) 90, 327, 555, 584, 1250, 1710
Cfr10I RCCGGY 4 cut(s) 35, 729, 2005, 3054
CseI GACGC 1 cut(s) 931
Csp6I GTAC 4 cut(s) 544, 608, 2602, 2864
CspAI ACCGGT 1 cut(s) 729
CspCI CAANNNNNGTGG 6 cut(s) 1777, 1812, 1957, 1992, 2262, 2297
CviQI GTAC 4 cut(s) 544, 608, 2602, 2864
EaeI YGGCCR 3 cut(s) 33, 1314, 2406
EagI CGGCCG 1 cut(s) 33
Eam1104I CTCTTC 7 cut(s) 615, 623, 1186, 1392, 1850, 2169, 2946
EarI CTCTTC 7 cut(s) 615, 623, 1186, 1392, 1850, 2169, 2946
EclXI CGGCCG 1 cut(s) 33
Eco130I CCWWGG 3 cut(s) 250, 1142, 2235
Eco24I GRGCYC 3 cut(s) 1379, 2181, 2589
Eco47I GGWCC 7 cut(s) 4, 1134, 1737, 1829, 2458, 2633, 3365
Eco52I CGGCCG 1 cut(s) 33
Eco57I CTGAAG 6 cut(s) 983, 1191, 1417, 1572, 2970, 3468
Eco91I GGTNACC 1 cut(s) 2312
EcoNI CCTNNNNNAGG 1 cut(s) 1889
EcoO109I RGGNCCY 3 cut(s) 1375, 2585, 2956
EcoO65I GGTNACC 1 cut(s) 2312
EcoRI GAATTC 1 cut(s) 790
EcoRII CCWGG 7 cut(s) 168, 641, 2055, 2169, 2316, 2331, 2473
EcoT14I CCWWGG 3 cut(s) 250, 1142, 2235
EcoT22I ATGCAT 1 cut(s) 3125
EcoT38I GRGCYC 3 cut(s) 1379, 2181, 2589
ErhI CCWWGG 3 cut(s) 250, 1142, 2235
Esp3I CGTCTC 2 cut(s) 57, 859
FalI AAGNNNNNCTT 2 cut(s) 1135, 1167
FaqI GGGAC 1 cut(s) 2471
FauI CCCGC 1 cut(s) 77
FauNDI CATATG 2 cut(s) 637, 3507
FbaI TGATCA 1 cut(s) 2490
FriOI GRGCYC 3 cut(s) 1379, 2181, 2589
FspBI CTAG 8 cut(s) 843, 1445, 1842, 2345, 2435, 2454, 2513, 2988
GlaI GCGC 6 cut(s) 89, 326, 554, 583, 1249, 1709
GsaI CCCAGC 2 cut(s) 1701, 3294
GsuI CTGGAG 1 cut(s) 2399
HaeIII GGCC 9 cut(s) 35, 200, 485, 1193, 1316, 1377, 2408, 2587, 2957
HgaI GACGC 1 cut(s) 931
HhaI GCGC 6 cut(s) 90, 327, 555, 584, 1250, 1710
Hin6I GCGC 6 cut(s) 88, 325, 553, 582, 1248, 1708
HinP1I GCGC 6 cut(s) 88, 325, 553, 582, 1248, 1708
HincII GTYRAC 2 cut(s) 1384, 1929
HindII GTYRAC 2 cut(s) 1384, 1929
HindIII AAGCTT 4 cut(s) 143, 401, 909, 2806
HphI GGTGA 9 cut(s) 50, 674, 978, 1091, 1369, 2227, 2914, 2938, 3091
Hpy166II GTNNAC 5 cut(s) 1384, 1929, 2167, 3226, 3365
Hpy8I GTNNAC 5 cut(s) 1384, 1929, 2167, 3226, 3365
Hpy99I CGWCG 1 cut(s) 52
HpyCH4III ACNGT 9 cut(s) 124, 870, 1057, 1388, 1737, 1794, 2205, 3152, 3431
HpyCH4IV ACGT 6 cut(s) 424, 647, 688, 893, 2536, 2554
HpyF10VI GCNNNNNNNGC 6 cut(s) 961, 1322, 2645, 3005, 3344, 3392
HpySE526I ACGT 6 cut(s) 424, 647, 688, 893, 2536, 2554
HspAI GCGC 6 cut(s) 88, 325, 553, 582, 1248, 1708
KroI GCCGGC 1 cut(s) 3054
KroNI GCCGGC 1 cut(s) 3056
Ksp22I TGATCA 1 cut(s) 2490
LguI GCTCTTC 1 cut(s) 2169
LweI GCATC 8 cut(s) 256, 807, 1264, 1498, 2635, 3110, 3117, 3151
MaeI CTAG 8 cut(s) 843, 1445, 1842, 2345, 2435, 2454, 2513, 2988
MaeII ACGT 6 cut(s) 424, 647, 688, 893, 2536, 2554
MaeIII GTNAC 3 cut(s) 2008, 2312, 2359
MbiI CCGCTC 2 cut(s) 2381, 3347
MfeI CAATTG 1 cut(s) 2274
MflI RGATCY 4 cut(s) 1436, 1988, 2340, 3295
MhlI GDGCHC 5 cut(s) 319, 1379, 1472, 2181, 2589
MlsI TGGCCA 2 cut(s) 1316, 2408
MluNI TGGCCA 2 cut(s) 1316, 2408
MlyI GAGTC 5 cut(s) 106, 144, 1273, 1409, 1934
MmeI TCCRAC 8 cut(s) 318, 788, 842, 1500, 2187, 2490, 3352, 3388
Mox20I TGGCCA 2 cut(s) 1316, 2408
Mph1103I ATGCAT 1 cut(s) 3125
MroNI GCCGGC 1 cut(s) 3054
MroXI GAANNNNTTC 3 cut(s) 1905, 1955, 2138
MscI TGGCCA 2 cut(s) 1316, 2408
MslI CAYNNNNRTG 5 cut(s) 687, 1272, 1686, 2486, 2689
Msp20I TGGCCA 2 cut(s) 1316, 2408
MspA1I CMGCKG 3 cut(s) 587, 1826, 3416
MspCI CTTAAG 1 cut(s) 1684
MunI CAATTG 1 cut(s) 2274
Mva1269I GAATGC 3 cut(s) 456, 2879, 3042
MvaI CCWGG 7 cut(s) 170, 643, 2057, 2171, 2318, 2333, 2475
MvnI CGCG 3 cut(s) 90, 555, 582
MwoI GCNNNNNNNGC 6 cut(s) 961, 1322, 2645, 3005, 3344, 3392
NaeI GCCGGC 1 cut(s) 3056
NciI CCSGG 5 cut(s) 9, 32, 202, 1379, 3265
NcoI CCATGG 1 cut(s) 2235
NdeI CATATG 2 cut(s) 637, 3507
NgoMIV GCCGGC 1 cut(s) 3054
NlaIV GGNNCC 9 cut(s) 6, 872, 1377, 2241, 2459, 2571, 2586, 2587, 3297
NmeAIII GCCGAG 2 cut(s) 2879, 2889
NmuCI GTSAC 2 cut(s) 2008, 2359
NsiI ATGCAT 1 cut(s) 3125
NspI RCATGY 1 cut(s) 3523
OliI CACNNNNGTG 2 cut(s) 687, 1686
PagI TCATGA 2 cut(s) 1615, 2767
PciI ACATGT 1 cut(s) 3519
PciSI GCTCTTC 1 cut(s) 2169
PcsI WCGNNNNNNNCGW 1 cut(s) 1876
PctI GAATGC 3 cut(s) 456, 2879, 3042
PdiI GCCGGC 1 cut(s) 3056
PdmI GAANNNNTTC 3 cut(s) 1905, 1955, 2138
PfeI GAWTC 8 cut(s) 983, 1033, 1406, 1567, 1901, 2159, 2521, 3185
PflMI CCANNNNNTGG 1 cut(s) 1519
PinAI ACCGGT 1 cut(s) 729
PleI GAGTC 5 cut(s) 106, 144, 1272, 1408, 1933
PpsI GAGTC 5 cut(s) 106, 144, 1272, 1408, 1933
Ppu21I YACGTR 1 cut(s) 2555
PscI ACATGT 1 cut(s) 3519
Psp6I CCWGG 7 cut(s) 168, 641, 2055, 2169, 2316, 2331, 2473
PspEI GGTNACC 1 cut(s) 2312
PspFI CCCAGC 2 cut(s) 1697, 3290
PspGI CCWGG 7 cut(s) 168, 641, 2055, 2169, 2316, 2331, 2473
PspN4I GGNNCC 9 cut(s) 6, 872, 1377, 2241, 2459, 2571, 2586, 2587, 3297
PspOMI GGGCCC 2 cut(s) 1375, 2585
PstI CTGCAG 1 cut(s) 1327
PstNI CAGNNNCTG 1 cut(s) 590
PsuI RGATCY 4 cut(s) 1436, 1988, 2340, 3295
PvuII CAGCTG 2 cut(s) 587, 1826
RsaI GTAC 4 cut(s) 545, 609, 2603, 2865
RsaNI GTAC 4 cut(s) 544, 608, 2602, 2864
RseI CAYNNNNRTG 5 cut(s) 687, 1272, 1686, 2486, 2689
SapI GCTCTTC 1 cut(s) 2169
SchI GAGTC 5 cut(s) 106, 144, 1273, 1409, 1934
SduI GDGCHC 5 cut(s) 319, 1379, 1472, 2181, 2589
SfaNI GCATC 8 cut(s) 256, 807, 1264, 1498, 2635, 3110, 3117, 3151
SfcI CTRYAG 2 cut(s) 1056, 1323
SinI GGWCC 7 cut(s) 4, 1134, 1737, 1829, 2458, 2633, 3365
SmiMI CAYNNNNRTG 5 cut(s) 687, 1272, 1686, 2486, 2689
SmlI CTYRAG 7 cut(s) 237, 461, 767, 929, 1028, 1477, 1684
SmoI CTYRAG 7 cut(s) 237, 461, 767, 929, 1028, 1477, 1684
SsiI CCGC 9 cut(s) 12, 70, 166, 349, 1277, 2379, 2669, 3347, 3416
SspI AATATT 1 cut(s) 2071
SspMI CTAG 8 cut(s) 843, 1445, 1842, 2345, 2435, 2454, 2513, 2988
StyI CCWWGG 3 cut(s) 250, 1142, 2235
TaaI ACNGT 9 cut(s) 124, 870, 1057, 1388, 1737, 1794, 2205, 3152, 3431
TaiI ACGT 6 cut(s) 427, 650, 691, 896, 2539, 2557
TaqI TCGA 5 cut(s) 126, 148, 960, 1024, 2738
TaqII GACCGA 2 cut(s) 216, 3231
TatI WGTACW 2 cut(s) 543, 2863
TauI GCSGC 2 cut(s) 168, 352
TfiI GAWTC 8 cut(s) 983, 1033, 1406, 1567, 1901, 2159, 2521, 3185
TseFI GTSAC 2 cut(s) 2008, 2359
Tsp45I GTSAC 2 cut(s) 2008, 2359
TspGWI ACGGA 3 cut(s) 97, 1065, 2677
Van91I CCANNNNNTGG 1 cut(s) 1519
Vha464I CTTAAG 1 cut(s) 1684
VpaK11BI GGWCC 7 cut(s) 4, 1134, 1737, 1829, 2458, 2633, 3365
XagI CCTNNNNNAGG 1 cut(s) 1889
XapI RAATTY 5 cut(s) 790, 1331, 2226, 2824, 3012
XbaI TCTAGA 3 cut(s) 842, 2512, 2987
XceI RCATGY 1 cut(s) 3523
XmnI GAANNNNTTC 3 cut(s) 1905, 1955, 2138
XspI CTAG 8 cut(s) 843, 1445, 1842, 2345, 2435, 2454, 2513, 2988
Zsp2I ATGCAT 1 cut(s) 3125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.