Rw7G029000
TCP Family

T-complex protein 11

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0005785
Physical Location & Seq
Reverse (-)
39933792 .. 39940070
6279 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G029000.1

Sequence Viewer

Length: 3315 bp
ATGGTCCCCGGTGGTCTAGTTTTGGATTTCCCGGCCGGTGAAACGCCGTCGTCTCCTCCAAGACTACCCCGCAGGCTCAGACGGAGGCTCGACCTTGTTCAGTCCTCCAAGACTCCCAACACTGTCGAGCAAATCCAAACCAAGCTTCGACTCGCCGATCTTCGCCGCCAGGAACACTATGAAAAGTTGTCAAACAAGGCCCGGACAAAGCCCAGAAGCCCCTCTCGATCTTCTTCTCAAGAGGAAGACCTTGGCGAGCGACTGGATGCCAAGCTCCAGGCTGCTGAGAAGAAAAGGTTGCTTATTTTGGAAAGTGCTCAAATGCGCTTAGCTAAGTTGGATGAGTTGCGGCAAGCAGCTAAAAGTGGCGTAGAAATGCGTTTTGAGAAGGAACGACAGAAGCTTGGTTCAAAAGTTGAATTACGTTTTCAGCAGGCAGAGGCAAATAGAATGCTTATGCTCAAGGCTTATAGACAAAGAAGGGCCAACTTGAAGGAGAGGTCATCTCAGTCATTGTTGCGAAAGATGGCTTGGGAGAATAAGTACAAGGAGCGCGTGCGTGCTGCAATTAACCAAAAACGCGCAGCTGCTGAGAAAAAGCGACTGGTACTTTTGGAAGAAGAGAAGAAGAGGGCATACGCCAGGACGTTGCAAGTGCAAAGAGTAGCGAAGTCTGTCTCTCACCAACGTGAGATTGAAAGGAGAGCGAAAAGGGATCAGTTAGAAGACCGGTTGCAGAGGGCAAAGAGACAAAGAGCAGAATATCTCAAGCAAAGAGGAAAGATACAGAATTCATTTCAAGTCAGTTGGAATAGGATGCACAAACAGGCTGATTTCCTGTCTAGAAAGTTAGCAAGGTGTTGGAGACGGTTCCACAGGCTCAAGAGAACTACGTTTGCTTTGGCAAAAGCTTACAATACCTTGAAACTTGAGGAAAACAGCGTCAAGTCAATGCCGTTCGAGCAGCTTGCAATTCTGATTGAATCACCTGATACCCTTCAGACTGGGAAGGCTCTACTTGATCGACTTGAGAATCGGTTGAAAGTCTCCAAGACTGTAGCCTCTTTAAACTATCCGTCCAGTATTGATAACATAGATCACCTTCTCAAACGAGTTGCTTCTCCCAAAAGGAGGACCACACCAAGGACATCTTTGAGAAGCAGGGAGGGAAAGAAAGCCTCTTCTGTCAGGGCCACAACCAGAACTTCAGCTAAATTAACAAGGTATCAAGTGAGAGTGGTTCTTTGCGCTTACATGATTTTGAGTCATCCAGATGCGGTTTTCAATGGTCAAGGAGAGCGTGAGACTTCTCTGGCCAAATCTGCAGAAGAATTTGTTAGAGAGTTTGAGTTGTTGGTGAAGACTATATTACAGGGCCCGGTCAACAGTTCTGAGGAAGAGTCTGATTCCACATCGCCCAAACGCTTAACCTTCAGATCTCAGCTAGGAGCTTTTGATAAAGCGTGGTGCTCCTACTTGAGTTGCTTTGTGGCATGGAAGGTTAAGGATGCCCAGTTGTTGGAGGGAGATTTAGTGAGGGCAGCTTGCCAGATGGAGCTGTCTATGATTCAAACTTGCAAGATGACTTCAGAAGGACATACTGCCGATCTCACTCATGATATGAAGGCTATTCAGAAACAGGTTGCAGAAGACCAAAAGCTACTGAGAGAAAAGGTGCAACACTTAAGTGGAGAAGCTGGGATTGAGCGTATGACATCTGCTTTATCTGAAACACGGTCCAAGTATTTTGCAGCAAAGGAAAATGGAAGTCCATCAGGGTTGCAAACCACTCAGTTTGTTTCTCCAAGCCCTCCAAGTTCATCAGCTGGTCCTTCTATTTCTAGCTTAGATAAGAAGAGTAATCAAAGTCGTGTAGTTCGTTCCCTATTTCAGGAAGATGAATCTATTCGTCCGAAAGGATTAGAGTCAACTGAGATTGGATTGATTGTGAATGAGTTCTCTAAGACCAATTTGAGTGGGCAGCTCGGATCTTCTTCCCAAAAGCCAGTCACTGAGAATGAACTGATTGTGAATGAGTTTCTCCATGAGCAAAACCAGGCTTTTGCTAATATTTTCAATGCTGCCGATGAAGATCAAAATAATGTCCAGTCAAAGATCAGAAACACTATGGAGAAGGCTTTCTGGGATGGGATAATGGAATCTGTAAACCAGGAAGAGCCCAACTATGACCGGATCATTCAACTGTTGGAGGAGGTGAGGGATGAAATTTGCGCTATGGCTCCACAGAGCTGGAAACAAGAAATTGTTGAAGCAATTGATGTGGATATTCTCTCTCAGGTGCTAAAATCTGGTAACCTGGATATTGATTACCTGGGAAAGATCCTAGAGTTTTCAATGGTCACTTTGCGAAAGCTCTCCGCTCCTGCGAATGATGATGAAATGATGGCCACTCTCCAGAGTTTAAGGAAAGAACTAGATGAGATATGTAATGCTAGGGACCAGTCCAACTGCTCAGGTGTCATTGCTATGATCAAGGGTCTGCGTTTTGTTCTAGAGCAGATTCAGGTGCTTAAACGTGAGATTAGCAAAGCACGTATAAGAATAATGGAGCCTTTATTGAAGGGGCCCACTGGTTTGCAGTACCTTAGAAATGCCTTTGCCAATCGCTATGGACCTGCCTCAGATGCCAATACCTCTCTACCAGTGACGGTGCAGTGGCTTTCATCCGTGTGGAATTGCAAAGATCAGGAGTGGCAAGAACATAAGATTGCTTCCTCGACTTTGATGAGCAGTGATAATTTGTCTCATGAGTTTCTTCCTTCCACCACCCTTAGAAGTGGTGGAAGCTTTCTGTTGAAATCAAATTCTTCATCGCTGTCTTCTAGAAATAGCCAAGGTAATGTACAACCGGAATGCAAGGGAGAAGGAGTTGATTTGTTGGTGAGGCTCGGCTTGTTGAAGTTGGTGAGTGGTGTTTCTGGTCTGACTGAAGAGGCCCTGCCTGAAACTTTTATGCTTAACCTTTCTAGATTAAGGGCTGTGCAGGCTCAAATTCAGAAAATTATTGTTTCTTCCATAAGCATTCTTATTTGCCGGCAAACCATATTAAGCGAGGGGGTGATAACAATGCCCACAGACATGGAGGGCATCCTGTCAAGATGCATTGAGCGGCTTTTGGGGATATTGGACAGTGTTGAAGATGCAGGTATGGAAGAAATTGTTGAATCAATCAGTGATTTCTCCATCAATGGAAATGAATGTGTGGTGGAAGCTACTGAAGTTTTAGTTGTGGCTGCTACCATATCAGTTGGTGTTCATGGAGCATGGTATATACATATGACTGATAACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tcp11

Protein Analysis

1104

Amino Acids

124.75

Weight (kDa)

9.38

Isoelectric Point (pI)

57.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tcp11 PF05794 677 - 1067 2.4e-63 T-complex protein 11
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2644, 3155
AccB7I CCANNNNNTGG 1 cut(s) 1519
AccBSI CCGCTC 2 cut(s) 2381, 3130
AccII CGCG 2 cut(s) 555, 582
AciI CCGC 6 cut(s) 70, 166, 349, 1277, 2379, 3130
AclWI GGATC 4 cut(s) 723, 1996, 2201, 2335
AcoI YGGCCR 3 cut(s) 33, 1314, 2406
AcsI RAATTY 5 cut(s) 790, 1331, 2226, 2824, 3012
AcuI CTGAAG 6 cut(s) 983, 1191, 1417, 1572, 2970, 3258
AfaI GTAC 4 cut(s) 545, 609, 2603, 2865
AfiI CCNNNNNNNGG 4 cut(s) 1131, 1143, 1519, 1891
AflII CTTAAG 1 cut(s) 1684
AflIII ACRYGT 1 cut(s) 3309
AgeI ACCGGT 1 cut(s) 729
AjnI CCWGG 7 cut(s) 168, 276, 641, 2055, 2169, 2316, 2331
AjuI GAANNNNNNNTTGG 4 cut(s) 129, 161, 514, 546
AleI CACNNNNGTG 2 cut(s) 687, 1686
Alw21I GWGCWC 2 cut(s) 319, 1472
Alw26I GTCTC 7 cut(s) 57, 682, 742, 859, 1051, 1298, 2769
AlwI GGATC 4 cut(s) 723, 1996, 2201, 2335
AlwNI CAGNNNCTG 2 cut(s) 590, 2012
AoxI GGCC 9 cut(s) 33, 198, 483, 1191, 1314, 1375, 2406, 2585, 2955
ApaI GGGCCC 2 cut(s) 1379, 2589
ApoI RAATTY 5 cut(s) 790, 1331, 2226, 2824, 3012
AsiGI ACCGGT 1 cut(s) 729
Asp700I GAANNNNTTC 3 cut(s) 1905, 1955, 2138
AspLEI GCGC 5 cut(s) 327, 555, 584, 1250, 2234
AsuC2I CCSGG 4 cut(s) 9, 32, 202, 1379
AsuHPI GGTGA 9 cut(s) 50, 674, 978, 1091, 1369, 2227, 2914, 2938, 3091
AvaII GGWCC 6 cut(s) 4, 1134, 1737, 1829, 2458, 2633
BaeGI GKGCMC 2 cut(s) 1379, 2589
BalI TGGCCA 2 cut(s) 1316, 2408
BanII GRGCYC 3 cut(s) 1379, 2181, 2589
BarI GAAGNNNNNNTAC 2 cut(s) 620, 652
BbsI GAAGAC 5 cut(s) 252, 732, 1367, 1656, 2832
Bbv12I GWGCWC 2 cut(s) 319, 1472
BccI CCATC 6 cut(s) 520, 1546, 1780, 2141, 2398, 3212
BceAI ACGGC 2 cut(s) 31, 940
BcgI CGANNNNNNTGC 2 cut(s) 950, 984
BciT130I CCWGG 7 cut(s) 170, 278, 643, 2057, 2171, 2318, 2333
BclI TGATCA 1 cut(s) 2490
BcnI CCSGG 4 cut(s) 9, 32, 202, 1379
BcoDI GTCTC 7 cut(s) 57, 682, 742, 859, 1051, 1298, 2769
BfmI CTRYAG 2 cut(s) 1056, 1323
BfrI CTTAAG 1 cut(s) 1684
BfuAI ACCTGC 2 cut(s) 2644, 3155
BglII AGATCT 1 cut(s) 1436
BlpI GCTNAGC 1 cut(s) 328
Bme18I GGWCC 6 cut(s) 4, 1134, 1737, 1829, 2458, 2633
BmiI GGNNCC 8 cut(s) 6, 872, 1377, 2241, 2459, 2571, 2586, 2587
BmrI ACTGGG 2 cut(s) 1014, 1507
BmsI GCATC 8 cut(s) 256, 807, 1264, 1498, 2635, 3110, 3117, 3151
BmuI ACTGGG 2 cut(s) 1014, 1507
BpiI GAAGAC 5 cut(s) 252, 732, 1367, 1656, 2832
BplI GAGNNNNNCTC 2 cut(s) 490, 522
BpmI CTGGAG 2 cut(s) 260, 2399
Bpu10I CCTNAGC 1 cut(s) 2473
Bpu1102I GCTNAGC 1 cut(s) 328
BpuEI CTTGAG 7 cut(s) 222, 446, 752, 866, 950, 1049, 1498
BpuMI CCSGG 4 cut(s) 9, 32, 202, 1379
BsaAI YACGTR 1 cut(s) 2555
BsaBI GATNNNNATC 1 cut(s) 2091
BsaJI CCNNGG 5 cut(s) 7, 250, 1142, 2332, 2854
BsaWI WCCGGW 3 cut(s) 729, 2190, 2869
BsaXI ACNNNNNCTCC 6 cut(s) 527, 557, 1518, 1548, 2874, 2904
Bsc4I CCNNNNNNNGG 4 cut(s) 1131, 1143, 1519, 1891
Bse118I RCCGGY 3 cut(s) 35, 729, 3054
Bse3DI GCAATG 1 cut(s) 2481
Bse8I GATNNNNATC 1 cut(s) 2091
BseBI CCWGG 7 cut(s) 170, 278, 643, 2057, 2171, 2318, 2333
BseDI CCNNGG 5 cut(s) 7, 250, 1142, 2332, 2854
BseGI GGATG 9 cut(s) 271, 346, 822, 1267, 1513, 2152, 2227, 2684, 3108
BseJI GATNNNNATC 1 cut(s) 2091
BseLI CCNNNNNNNGG 4 cut(s) 1131, 1143, 1519, 1891
BseMI GCAATG 1 cut(s) 2481
BseRI GAGGAG 2 cut(s) 45, 2225
BseSI GKGCMC 2 cut(s) 1379, 2589
BseX3I CGGCCG 1 cut(s) 33
BseYI CCCAGC 1 cut(s) 1697
BsgI GTGCAG 2 cut(s) 2693, 3023
Bsh1236I CGCG 2 cut(s) 555, 582
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 9 cut(s) 35, 200, 485, 1193, 1316, 1377, 2408, 2587, 2957
BshTI ACCGGT 1 cut(s) 729
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 2 cut(s) 319, 1472
BsiSI CCGG 9 cut(s) 9, 32, 36, 202, 730, 1379, 2191, 2870, 3055
BslFI GGGAC 1 cut(s) 2471
BslI CCNNNNNNNGG 4 cut(s) 1131, 1143, 1519, 1891
BsmAI GTCTC 7 cut(s) 57, 682, 742, 859, 1051, 1298, 2769
BsmBI CGTCTC 2 cut(s) 57, 859
BsmFI GGGAC 1 cut(s) 2471
BsmI GAATGC 3 cut(s) 456, 2879, 3042
BsnI GGCC 9 cut(s) 35, 200, 485, 1193, 1316, 1377, 2408, 2587, 2957
Bsp120I GGGCCC 2 cut(s) 1375, 2585
Bsp1286I GDGCHC 5 cut(s) 319, 1379, 1472, 2181, 2589
Bsp1407I TGTACA 1 cut(s) 2863
Bsp1720I GCTNAGC 1 cut(s) 328
BspACI CCGC 6 cut(s) 70, 166, 349, 1277, 2379, 3130
BspANI GGCC 9 cut(s) 35, 200, 485, 1193, 1316, 1377, 2408, 2587, 2957
BspFNI CGCG 2 cut(s) 555, 582
BspHI TCATGA 2 cut(s) 1615, 2767
BspLI GGNNCC 8 cut(s) 6, 872, 1377, 2241, 2459, 2571, 2586, 2587
BspMAI CTGCAG 1 cut(s) 1327
BspMI ACCTGC 2 cut(s) 2644, 3155
BspPI GGATC 4 cut(s) 723, 1996, 2201, 2335
BspQI GCTCTTC 1 cut(s) 2169
BspTI CTTAAG 1 cut(s) 1684
BsrBI CCGCTC 2 cut(s) 2381, 3130
BsrDI GCAATG 1 cut(s) 2481
BsrFI RCCGGY 3 cut(s) 35, 729, 3054
BsrGI TGTACA 1 cut(s) 2863
BssAI RCCGGY 3 cut(s) 35, 729, 3054
BssECI CCNNGG 5 cut(s) 7, 250, 1142, 2332, 2854
BssT1I CCWWGG 3 cut(s) 250, 1142, 2854
Bst2UI CCWGG 7 cut(s) 170, 278, 643, 2057, 2171, 2318, 2333
Bst4CI ACNGT 8 cut(s) 124, 870, 1057, 1388, 1737, 2205, 2671, 3152
Bst6I CTCTTC 7 cut(s) 615, 623, 1186, 1392, 1850, 2169, 2946
BstAFI CTTAAG 1 cut(s) 1684
BstAUI TGTACA 1 cut(s) 2863
BstBAI YACGTR 1 cut(s) 2555
BstEII GGTNACC 1 cut(s) 2312
BstENI CCTNNNNNAGG 1 cut(s) 1889
BstF5I GGATG 9 cut(s) 271, 346, 822, 1267, 1513, 2152, 2227, 2684, 3108
BstFNI CGCG 2 cut(s) 555, 582
BstHHI GCGC 5 cut(s) 327, 555, 584, 1250, 2234
BstMAI GTCTC 7 cut(s) 57, 682, 742, 859, 1051, 1298, 2769
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 4 cut(s) 961, 1322, 2645, 3005
BstNI CCWGG 7 cut(s) 170, 278, 643, 2057, 2171, 2318, 2333
BstNSI RCATGY 1 cut(s) 3313
BstPI GGTNACC 1 cut(s) 2312
BstSFI CTRYAG 2 cut(s) 1056, 1323
BstSLI GKGCMC 2 cut(s) 1379, 2589
BstUI CGCG 2 cut(s) 555, 582
BstV2I GAAGAC 5 cut(s) 252, 732, 1367, 1656, 2832
BstX2I RGATCY 3 cut(s) 1436, 1988, 2340
BstXI CCANNNNNNTGG 2 cut(s) 2250, 3100
BstYI RGATCY 3 cut(s) 1436, 1988, 2340
BstZI CGGCCG 1 cut(s) 33
BsuRI GGCC 9 cut(s) 35, 200, 485, 1193, 1316, 1377, 2408, 2587, 2957
BtgZI GCGATG 2 cut(s) 1398, 2817
BtsCI GGATG 9 cut(s) 271, 346, 822, 1267, 1513, 2152, 2227, 2684, 3108
BtsI GCAGTG 2 cut(s) 2681, 2758
BtsIMutI CAGTG 8 cut(s) 120, 2010, 2589, 2670, 2681, 2758, 3157, 3199
BveI ACCTGC 2 cut(s) 2644, 3155
CaiI CAGNNNCTG 2 cut(s) 590, 2012
CciI TCATGA 2 cut(s) 1615, 2767
CfoI GCGC 5 cut(s) 327, 555, 584, 1250, 2234
Cfr10I RCCGGY 3 cut(s) 35, 729, 3054
CseI GACGC 1 cut(s) 931
Csp6I GTAC 4 cut(s) 544, 608, 2602, 2864
CspAI ACCGGT 1 cut(s) 729
CspCI CAANNNNNGTGG 6 cut(s) 1777, 1812, 1957, 1992, 2262, 2297
CviAII CATG 9 cut(s) 1255, 1494, 1616, 2045, 2768, 3100, 3278, 3285, 3310
CviQI GTAC 4 cut(s) 544, 608, 2602, 2864
DraI TTTAAA 1 cut(s) 1068
EaeI YGGCCR 3 cut(s) 33, 1314, 2406
EagI CGGCCG 1 cut(s) 33
Eam1104I CTCTTC 7 cut(s) 615, 623, 1186, 1392, 1850, 2169, 2946
EarI CTCTTC 7 cut(s) 615, 623, 1186, 1392, 1850, 2169, 2946
EclXI CGGCCG 1 cut(s) 33
Eco130I CCWWGG 3 cut(s) 250, 1142, 2854
Eco24I GRGCYC 3 cut(s) 1379, 2181, 2589
Eco47I GGWCC 6 cut(s) 4, 1134, 1737, 1829, 2458, 2633
Eco52I CGGCCG 1 cut(s) 33
Eco57I CTGAAG 6 cut(s) 983, 1191, 1417, 1572, 2970, 3258
Eco91I GGTNACC 1 cut(s) 2312
EcoNI CCTNNNNNAGG 1 cut(s) 1889
EcoO109I RGGNCCY 3 cut(s) 1375, 2585, 2956
EcoO65I GGTNACC 1 cut(s) 2312
EcoRI GAATTC 1 cut(s) 790
EcoRII CCWGG 7 cut(s) 168, 276, 641, 2055, 2169, 2316, 2331
EcoT14I CCWWGG 3 cut(s) 250, 1142, 2854
EcoT22I ATGCAT 1 cut(s) 3125
EcoT38I GRGCYC 3 cut(s) 1379, 2181, 2589
ErhI CCWWGG 3 cut(s) 250, 1142, 2854
Esp3I CGTCTC 2 cut(s) 57, 859
FaeI CATG 9 cut(s) 1258, 1497, 1619, 2048, 2771, 3103, 3281, 3288, 3313
FalI AAGNNNNNCTT 2 cut(s) 1135, 1167
FaqI GGGAC 1 cut(s) 2471
FatI CATG 9 cut(s) 1254, 1493, 1615, 2044, 2767, 3099, 3277, 3284, 3309
FauI CCCGC 1 cut(s) 77
FauNDI CATATG 1 cut(s) 3297
FbaI TGATCA 1 cut(s) 2490
FokI GGATG 9 cut(s) 278, 353, 829, 1254, 1520, 2159, 2234, 2671, 3095
FriOI GRGCYC 3 cut(s) 1379, 2181, 2589
GlaI GCGC 5 cut(s) 326, 554, 583, 1249, 2233
GsaI CCCAGC 1 cut(s) 1701
GsuI CTGGAG 2 cut(s) 260, 2399
HaeIII GGCC 9 cut(s) 35, 200, 485, 1193, 1316, 1377, 2408, 2587, 2957
HapII CCGG 9 cut(s) 9, 32, 36, 202, 730, 1379, 2191, 2870, 3055
HgaI GACGC 1 cut(s) 931
HhaI GCGC 5 cut(s) 327, 555, 584, 1250, 2234
Hin1II CATG 9 cut(s) 1258, 1497, 1619, 2048, 2771, 3103, 3281, 3288, 3313
Hin6I GCGC 5 cut(s) 325, 553, 582, 1248, 2232
HinP1I GCGC 5 cut(s) 325, 553, 582, 1248, 2232
HincII GTYRAC 2 cut(s) 1384, 1929
HindII GTYRAC 2 cut(s) 1384, 1929
HindIII AAGCTT 4 cut(s) 143, 401, 909, 2806
HpaII CCGG 9 cut(s) 9, 32, 36, 202, 730, 1379, 2191, 2870, 3055
HphI GGTGA 9 cut(s) 50, 674, 978, 1091, 1369, 2227, 2914, 2938, 3091
Hpy166II GTNNAC 3 cut(s) 1384, 1929, 2167
Hpy8I GTNNAC 3 cut(s) 1384, 1929, 2167
Hpy99I CGWCG 1 cut(s) 52
HpyCH4III ACNGT 8 cut(s) 124, 870, 1057, 1388, 1737, 2205, 2671, 3152
HpyCH4IV ACGT 6 cut(s) 424, 647, 688, 893, 2536, 2554
HpyF10VI GCNNNNNNNGC 4 cut(s) 961, 1322, 2645, 3005
HpySE526I ACGT 6 cut(s) 424, 647, 688, 893, 2536, 2554
Hsp92II CATG 9 cut(s) 1258, 1497, 1619, 2048, 2771, 3103, 3281, 3288, 3313
HspAI GCGC 5 cut(s) 325, 553, 582, 1248, 2232
KroI GCCGGC 1 cut(s) 3054
KroNI GCCGGC 1 cut(s) 3056
Ksp22I TGATCA 1 cut(s) 2490
LguI GCTCTTC 1 cut(s) 2169
LmnI GCTCC 9 cut(s) 279, 550, 1448, 1475, 1555, 2245, 2386, 2569, 3281
LweI GCATC 8 cut(s) 256, 807, 1264, 1498, 2635, 3110, 3117, 3151
MaeII ACGT 6 cut(s) 424, 647, 688, 893, 2536, 2554
MaeIII GTNAC 4 cut(s) 2008, 2312, 2359, 2665
MbiI CCGCTC 2 cut(s) 2381, 3130
MfeI CAATTG 1 cut(s) 2274
MflI RGATCY 3 cut(s) 1436, 1988, 2340
MhlI GDGCHC 5 cut(s) 319, 1379, 1472, 2181, 2589
MlsI TGGCCA 2 cut(s) 1316, 2408
MluNI TGGCCA 2 cut(s) 1316, 2408
MlyI GAGTC 5 cut(s) 106, 144, 1273, 1409, 1934
MmeI TCCRAC 6 cut(s) 318, 788, 842, 1500, 2187, 2490
Mox20I TGGCCA 2 cut(s) 1316, 2408
Mph1103I ATGCAT 1 cut(s) 3125
MroNI GCCGGC 1 cut(s) 3054
MroXI GAANNNNTTC 3 cut(s) 1905, 1955, 2138
MscI TGGCCA 2 cut(s) 1316, 2408
MslI CAYNNNNRTG 6 cut(s) 687, 1272, 1686, 2486, 2689, 3098
Msp20I TGGCCA 2 cut(s) 1316, 2408
MspA1I CMGCKG 2 cut(s) 587, 1826
MspCI CTTAAG 1 cut(s) 1684
MspI CCGG 9 cut(s) 9, 32, 36, 202, 730, 1379, 2191, 2870, 3055
MunI CAATTG 1 cut(s) 2274
Mva1269I GAATGC 3 cut(s) 456, 2879, 3042
MvaI CCWGG 7 cut(s) 170, 278, 643, 2057, 2171, 2318, 2333
MvnI CGCG 2 cut(s) 555, 582
MwoI GCNNNNNNNGC 4 cut(s) 961, 1322, 2645, 3005
NaeI GCCGGC 1 cut(s) 3056
NciI CCSGG 4 cut(s) 9, 32, 202, 1379
NdeI CATATG 1 cut(s) 3297
NgoMIV GCCGGC 1 cut(s) 3054
NlaIII CATG 9 cut(s) 1258, 1497, 1619, 2048, 2771, 3103, 3281, 3288, 3313
NlaIV GGNNCC 8 cut(s) 6, 872, 1377, 2241, 2459, 2571, 2586, 2587
NmeAIII GCCGAG 1 cut(s) 2889
NmuCI GTSAC 3 cut(s) 2008, 2359, 2665
NsiI ATGCAT 1 cut(s) 3125
NspI RCATGY 1 cut(s) 3313
OliI CACNNNNGTG 2 cut(s) 687, 1686
PagI TCATGA 2 cut(s) 1615, 2767
PciI ACATGT 1 cut(s) 3309
PciSI GCTCTTC 1 cut(s) 2169
PcsI WCGNNNNNNNCGW 1 cut(s) 1876
PctI GAATGC 3 cut(s) 456, 2879, 3042
PdiI GCCGGC 1 cut(s) 3056
PdmI GAANNNNTTC 3 cut(s) 1905, 1955, 2138
PfeI GAWTC 8 cut(s) 983, 1033, 1406, 1567, 1901, 2159, 2521, 3185
PflMI CCANNNNNTGG 1 cut(s) 1519
PinAI ACCGGT 1 cut(s) 729
PleI GAGTC 5 cut(s) 106, 144, 1272, 1408, 1933
PpsI GAGTC 5 cut(s) 106, 144, 1272, 1408, 1933
Ppu21I YACGTR 1 cut(s) 2555
PscI ACATGT 1 cut(s) 3309
Psp6I CCWGG 7 cut(s) 168, 276, 641, 2055, 2169, 2316, 2331
PspEI GGTNACC 1 cut(s) 2312
PspFI CCCAGC 1 cut(s) 1697
PspGI CCWGG 7 cut(s) 168, 276, 641, 2055, 2169, 2316, 2331
PspN4I GGNNCC 8 cut(s) 6, 872, 1377, 2241, 2459, 2571, 2586, 2587
PspOMI GGGCCC 2 cut(s) 1375, 2585
PstI CTGCAG 1 cut(s) 1327
PstNI CAGNNNCTG 2 cut(s) 590, 2012
PsuI RGATCY 3 cut(s) 1436, 1988, 2340
PvuII CAGCTG 2 cut(s) 587, 1826
RsaI GTAC 4 cut(s) 545, 609, 2603, 2865
RsaNI GTAC 4 cut(s) 544, 608, 2602, 2864
RseI CAYNNNNRTG 6 cut(s) 687, 1272, 1686, 2486, 2689, 3098
SapI GCTCTTC 1 cut(s) 2169
SchI GAGTC 5 cut(s) 106, 144, 1273, 1409, 1934
SduI GDGCHC 5 cut(s) 319, 1379, 1472, 2181, 2589
SfaNI GCATC 8 cut(s) 256, 807, 1264, 1498, 2635, 3110, 3117, 3151
SfcI CTRYAG 2 cut(s) 1056, 1323
SinI GGWCC 6 cut(s) 4, 1134, 1737, 1829, 2458, 2633
SmiMI CAYNNNNRTG 6 cut(s) 687, 1272, 1686, 2486, 2689, 3098
SmlI CTYRAG 8 cut(s) 237, 461, 767, 881, 929, 1028, 1477, 1684
SmoI CTYRAG 8 cut(s) 237, 461, 767, 881, 929, 1028, 1477, 1684
SsiI CCGC 6 cut(s) 70, 166, 349, 1277, 2379, 3130
SspI AATATT 1 cut(s) 2071
StyI CCWWGG 3 cut(s) 250, 1142, 2854
TaaI ACNGT 8 cut(s) 124, 870, 1057, 1388, 1737, 2205, 2671, 3152
TaiI ACGT 6 cut(s) 427, 650, 691, 896, 2539, 2557
TaqI TCGA 7 cut(s) 90, 126, 148, 226, 960, 1024, 2738
TatI WGTACW 2 cut(s) 543, 2863
TauI GCSGC 3 cut(s) 168, 352, 3133
TfiI GAWTC 8 cut(s) 983, 1033, 1406, 1567, 1901, 2159, 2521, 3185
TscAI CASTG 8 cut(s) 127, 2017, 2596, 2670, 2681, 2758, 3157, 3199
TseFI GTSAC 3 cut(s) 2008, 2359, 2665
Tsp45I GTSAC 3 cut(s) 2008, 2359, 2665
TspGWI ACGGA 3 cut(s) 97, 1065, 2677
TspRI CASTG 8 cut(s) 127, 2017, 2596, 2670, 2681, 2758, 3157, 3199
Van91I CCANNNNNTGG 1 cut(s) 1519
Vha464I CTTAAG 1 cut(s) 1684
VpaK11BI GGWCC 6 cut(s) 4, 1134, 1737, 1829, 2458, 2633
XagI CCTNNNNNAGG 1 cut(s) 1889
XapI RAATTY 5 cut(s) 790, 1331, 2226, 2824, 3012
XbaI TCTAGA 4 cut(s) 842, 2512, 2843, 2987
XceI RCATGY 1 cut(s) 3313
XmnI GAANNNNTTC 3 cut(s) 1905, 1955, 2138
Zsp2I ATGCAT 1 cut(s) 3125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.